Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75172.t1 | XP_013470468.1 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 4.00E-177 | 630.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75172.t1 | Q9C942 | 36.4 | 280 | 176 | 2 | 21 | 298 | 50 | 329 | 8.8e-48 | 192.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75172.t1 | A0A072VS52 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 2.9e-177 | 630.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54469 | MS.gene75172 | PPI |
MS.gene75172 | MS.gene76909 | PPI |
MS.gene80965 | MS.gene75172 | PPI |
MS.gene75172 | MS.gene92221 | PPI |
MS.gene75172 | MS.gene32176 | PPI |
MS.gene75172 | MS.gene066454 | PPI |
MS.gene90834 | MS.gene75172 | PPI |
MS.gene75172 | MS.gene052529 | PPI |
MS.gene75172 | MS.gene39411 | PPI |
MS.gene029108 | MS.gene75172 | PPI |
MS.gene33751 | MS.gene75172 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75172.t1 | MTR_1g115535 | 97.771 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 0.0 | 645 |
MS.gene75172.t1 | MTR_1g115535 | 97.764 | 313 | 7 | 0 | 2 | 314 | 6 | 318 | 0.0 | 642 |
MS.gene75172.t1 | MTR_1g088470 | 52.881 | 295 | 138 | 1 | 8 | 302 | 6 | 299 | 2.84e-121 | 351 |
MS.gene75172.t1 | MTR_7g108770 | 51.370 | 292 | 141 | 1 | 4 | 295 | 2 | 292 | 6.54e-115 | 335 |
MS.gene75172.t1 | MTR_6g025610 | 47.260 | 292 | 154 | 0 | 7 | 298 | 41 | 332 | 2.20e-94 | 283 |
MS.gene75172.t1 | MTR_6g018490 | 46.918 | 292 | 155 | 0 | 7 | 298 | 51 | 342 | 3.80e-94 | 283 |
MS.gene75172.t1 | MTR_5g056550 | 46.528 | 288 | 153 | 1 | 7 | 293 | 104 | 391 | 5.31e-91 | 276 |
MS.gene75172.t1 | MTR_7g007260 | 45.455 | 286 | 156 | 0 | 7 | 292 | 52 | 337 | 2.71e-87 | 265 |
MS.gene75172.t1 | MTR_1g110670 | 43.369 | 279 | 157 | 1 | 16 | 293 | 79 | 357 | 7.95e-84 | 257 |
MS.gene75172.t1 | MTR_6g084420 | 42.321 | 293 | 168 | 1 | 7 | 298 | 51 | 343 | 9.83e-83 | 254 |
MS.gene75172.t1 | MTR_4g089170 | 42.321 | 293 | 168 | 1 | 4 | 295 | 33 | 325 | 9.56e-78 | 240 |
MS.gene75172.t1 | MTR_7g007260 | 42.308 | 286 | 152 | 1 | 7 | 292 | 52 | 324 | 2.24e-75 | 234 |
MS.gene75172.t1 | MTR_5g056550 | 42.014 | 288 | 133 | 2 | 7 | 293 | 104 | 358 | 7.35e-75 | 234 |
MS.gene75172.t1 | MTR_7g007260 | 42.160 | 287 | 152 | 2 | 7 | 292 | 52 | 325 | 5.50e-74 | 231 |
MS.gene75172.t1 | MTR_1g095110 | 38.776 | 294 | 171 | 6 | 7 | 295 | 28 | 317 | 3.02e-63 | 203 |
MS.gene75172.t1 | MTR_4g127220 | 36.918 | 279 | 174 | 2 | 21 | 297 | 41 | 319 | 6.12e-58 | 189 |
MS.gene75172.t1 | MTR_5g056550 | 44.056 | 143 | 79 | 1 | 7 | 148 | 104 | 246 | 6.96e-39 | 139 |
MS.gene75172.t1 | MTR_5g056550 | 44.366 | 142 | 78 | 1 | 7 | 147 | 104 | 245 | 1.94e-38 | 137 |
MS.gene75172.t1 | MTR_6g071475 | 31.071 | 280 | 182 | 6 | 16 | 293 | 120 | 390 | 1.60e-32 | 124 |
MS.gene75172.t1 | MTR_3g109870 | 28.374 | 289 | 177 | 9 | 8 | 293 | 93 | 354 | 5.11e-24 | 100 |
MS.gene75172.t1 | MTR_1g110680 | 42.553 | 94 | 50 | 2 | 200 | 293 | 15 | 104 | 1.45e-14 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75172.t1 | AT2G39420 | 64.650 | 314 | 110 | 1 | 1 | 313 | 1 | 314 | 7.87e-160 | 449 |
MS.gene75172.t1 | AT2G39410 | 61.415 | 311 | 119 | 1 | 1 | 310 | 1 | 311 | 2.66e-154 | 434 |
MS.gene75172.t1 | AT2G39400 | 62.171 | 304 | 115 | 0 | 7 | 310 | 2 | 305 | 2.83e-149 | 422 |
MS.gene75172.t1 | AT3G55180 | 60.984 | 305 | 118 | 1 | 7 | 310 | 2 | 306 | 1.24e-145 | 412 |
MS.gene75172.t1 | AT3G55190 | 55.208 | 288 | 128 | 1 | 7 | 293 | 8 | 295 | 2.46e-122 | 353 |
MS.gene75172.t1 | AT3G62860 | 52.431 | 288 | 136 | 1 | 7 | 294 | 6 | 292 | 1.71e-119 | 347 |
MS.gene75172.t1 | AT2G47630 | 51.546 | 291 | 140 | 1 | 5 | 294 | 4 | 294 | 1.17e-118 | 345 |
MS.gene75172.t1 | AT2G39400 | 62.667 | 225 | 83 | 1 | 7 | 231 | 2 | 225 | 1.24e-106 | 311 |
MS.gene75172.t1 | AT3G62860 | 53.414 | 249 | 116 | 0 | 46 | 294 | 1 | 249 | 1.75e-102 | 303 |
MS.gene75172.t1 | AT2G47630 | 51.807 | 249 | 120 | 0 | 46 | 294 | 1 | 249 | 7.41e-100 | 296 |
MS.gene75172.t1 | AT2G47630 | 50.196 | 255 | 120 | 1 | 40 | 294 | 22 | 269 | 1.71e-97 | 291 |
MS.gene75172.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.72e-91 | 276 |
MS.gene75172.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.72e-91 | 276 |
MS.gene75172.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 82 | 372 | 3.40e-91 | 276 |
MS.gene75172.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 68 | 358 | 4.78e-91 | 276 |
MS.gene75172.t1 | AT1G11090 | 45.390 | 282 | 153 | 1 | 13 | 293 | 33 | 314 | 5.41e-83 | 254 |
MS.gene75172.t1 | AT1G77420 | 42.361 | 288 | 165 | 1 | 7 | 293 | 91 | 378 | 2.62e-80 | 249 |
MS.gene75172.t1 | AT5G14980 | 37.755 | 294 | 181 | 2 | 3 | 295 | 25 | 317 | 1.24e-70 | 222 |
MS.gene75172.t1 | AT5G19290 | 34.364 | 291 | 188 | 3 | 7 | 295 | 29 | 318 | 3.21e-59 | 193 |
MS.gene75172.t1 | AT1G52760 | 37.011 | 281 | 173 | 4 | 21 | 298 | 50 | 329 | 1.70e-57 | 188 |
MS.gene75172.t1 | AT2G39410 | 61.165 | 103 | 39 | 1 | 1 | 102 | 1 | 103 | 1.34e-43 | 145 |
MS.gene75172.t1 | AT1G73480 | 34.875 | 281 | 166 | 8 | 18 | 293 | 194 | 462 | 9.17e-41 | 148 |
MS.gene75172.t1 | AT1G18360 | 32.302 | 291 | 177 | 10 | 11 | 293 | 103 | 381 | 1.07e-34 | 130 |
MS.gene75172.t1 | AT5G11650 | 32.500 | 280 | 174 | 8 | 18 | 293 | 110 | 378 | 4.73e-34 | 128 |
Find 61 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATTGGGACGGTGCTATTT+TGG | 0.211717 | 1.1:+81286063 | MS.gene75172:CDS |
CACATGAAGATTAATGCTTT+TGG | 0.262833 | 1.1:-81285457 | None:intergenic |
TGGTGAGCCACCAGAAAATT+TGG | 0.292885 | 1.1:+81291353 | MS.gene75172:CDS |
CTCATCTTCTTCTTATTCTC+TGG | 0.297099 | 1.1:-81285977 | None:intergenic |
TACCACATATGCTGCTAAAA+TGG | 0.299979 | 1.1:-81285728 | None:intergenic |
AAGAAGATGAGGTATTTGTT+AGG | 0.361063 | 1.1:+81285989 | MS.gene75172:CDS |
ATGCAACGTCAATGATATCT+TGG | 0.366862 | 1.1:-81290920 | None:intergenic |
ATAGCACCGTCCCAATATTC+TGG | 0.371738 | 1.1:-81286058 | None:intergenic |
TATACCTGTTGTCTGACTTC+GGG | 0.372481 | 1.1:-81290951 | None:intergenic |
GAAGGACATGGAAAATCATA+TGG | 0.374514 | 1.1:+81285654 | MS.gene75172:CDS |
GGTAAACCTCGTTTGAGAAC+AGG | 0.406676 | 1.1:+81291141 | MS.gene75172:CDS |
ATACGCATCACAAATGCGTT+TGG | 0.426579 | 1.1:-81290849 | None:intergenic |
AATAAACCATGCCACATTCC+AGG | 0.432223 | 1.1:-81291327 | None:intergenic |
AATGGTGGATATGCAGTATA+TGG | 0.439539 | 1.1:+81285621 | MS.gene75172:CDS |
GAACAGGTTATGAACTTAGC+AGG | 0.442798 | 1.1:+81291157 | MS.gene75172:CDS |
TTCGTTTGCAGGAATCCAAC+TGG | 0.447472 | 1.1:-81285431 | None:intergenic |
ATATACCTGTTGTCTGACTT+CGG | 0.460427 | 1.1:-81290952 | None:intergenic |
ATGTGGCATGGTTTATTGTA+TGG | 0.464306 | 1.1:+81291333 | MS.gene75172:CDS |
GTATTTGTTAGGAGAATCAA+TGG | 0.473307 | 1.1:+81286000 | MS.gene75172:CDS |
CAGGGTTGCTACACAAATTG+AGG | 0.478781 | 1.1:+81291176 | MS.gene75172:CDS |
CGTCAATGATATCTTGGGTT+GGG | 0.478954 | 1.1:-81290914 | None:intergenic |
ATTAAATTACTTACTGTCCA+TGG | 0.494516 | 1.1:-81285509 | None:intergenic |
GTCTCTGATTCTGATTACTT+AGG | 0.494953 | 1.1:-81291474 | None:intergenic |
TGTAATTGTTTGCTCACTGA+TGG | 0.495340 | 1.1:-81291264 | None:intergenic |
CATGGTGATGCTGCATTCCA+TGG | 0.495721 | 1.1:-81285491 | None:intergenic |
ATAGAGGAAAGATCTCAATA+TGG | 0.496875 | 1.1:+81291405 | MS.gene75172:CDS |
GTTGGGACTATTTGCCATGT+GGG | 0.500420 | 1.1:-81290897 | None:intergenic |
TTCACGAGGAATGAAGCTAT+TGG | 0.503313 | 1.1:+81285405 | MS.gene75172:CDS |
GCAAATCAATACTGCTTCAA+AGG | 0.506460 | 1.1:+81291120 | MS.gene75172:CDS |
AGTCCCCGAAGTCAGACAAC+AGG | 0.533737 | 1.1:+81290947 | MS.gene75172:CDS |
GCATTAATCTTCATGTGTCA+TGG | 0.535158 | 1.1:+81285463 | MS.gene75172:CDS |
ATAAACCATGCCACATTCCA+GGG | 0.536826 | 1.1:-81291326 | None:intergenic |
GGAAAATCATATGGGTTACC+TGG | 0.550368 | 1.1:+81285663 | MS.gene75172:CDS |
TGAAGCTATTGGCAACCAGT+TGG | 0.556889 | 1.1:+81285416 | MS.gene75172:CDS |
CAGAGAATAAGAAGAAGATG+AGG | 0.560462 | 1.1:+81285978 | MS.gene75172:CDS |
TTTGGCTGCACCAATGTGCA+AGG | 0.567302 | 1.1:+81286081 | MS.gene75172:CDS |
TGCAACGTCAATGATATCTT+GGG | 0.571424 | 1.1:-81290919 | None:intergenic |
ACAGCAAGAAGACTTGCAAA+TGG | 0.575144 | 1.1:+81285603 | MS.gene75172:CDS |
GGTTGGGACTATTTGCCATG+TGG | 0.578579 | 1.1:-81290898 | None:intergenic |
ACGTCAATGATATCTTGGGT+TGG | 0.580610 | 1.1:-81290915 | None:intergenic |
GGCATAGATTATGAAGGACA+TGG | 0.585316 | 1.1:+81285642 | MS.gene75172:CDS |
TGAAATTATACCCTGGAATG+TGG | 0.585853 | 1.1:+81291316 | MS.gene75172:CDS |
AGAATCAATGGGAGGAGCTG+TGG | 0.588110 | 1.1:+81286012 | MS.gene75172:CDS |
TCAAAATTCTTAACAAGACC+AGG | 0.588245 | 1.1:-81285681 | None:intergenic |
TTATACCCTGGAATGTGGCA+TGG | 0.590145 | 1.1:+81291321 | MS.gene75172:CDS |
AACAGGTTATGAACTTAGCA+GGG | 0.592891 | 1.1:+81291158 | MS.gene75172:CDS |
GCAAGAAGACTTGCAAATGG+TGG | 0.599106 | 1.1:+81285606 | MS.gene75172:CDS |
ATACCTGTTGTCTGACTTCG+GGG | 0.600788 | 1.1:-81290950 | None:intergenic |
GTATATGGCATAGATTATGA+AGG | 0.603827 | 1.1:+81285636 | MS.gene75172:CDS |
TATTTGTTAGGAGAATCAAT+GGG | 0.610159 | 1.1:+81286001 | MS.gene75172:CDS |
AAGGACATGGAAAATCATAT+GGG | 0.610292 | 1.1:+81285655 | MS.gene75172:CDS |
CACATATGCTGCTAAAATGG+CGG | 0.616640 | 1.1:-81285725 | None:intergenic |
GCAAAGCTAACCTTGCACAT+TGG | 0.625763 | 1.1:-81286091 | None:intergenic |
AACTGACATCAAATACGAAG+AGG | 0.626873 | 1.1:+81285206 | MS.gene75172:CDS |
TCATAACCTGTTCTCAAACG+AGG | 0.632056 | 1.1:-81291147 | None:intergenic |
TAAGCAAAGTTGCTCCCACA+TGG | 0.635188 | 1.1:+81290883 | MS.gene75172:CDS |
CATGGAATGCAGCATCACCA+TGG | 0.662101 | 1.1:+81285492 | MS.gene75172:CDS |
TTGTTAGGAGAATCAATGGG+AGG | 0.667244 | 1.1:+81286004 | MS.gene75172:CDS |
CATGTGTCATGGATATGCCA+TGG | 0.671110 | 1.1:+81285474 | MS.gene75172:CDS |
AAGACACTGAAATTATACCC+TGG | 0.682010 | 1.1:+81291309 | MS.gene75172:CDS |
GATTTCGTATTGAATTCACG+AGG | 0.718373 | 1.1:+81285391 | MS.gene75172:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATTATTACCATTATT+TGG | + | chr1.1:81289961-81289980 | MS.gene75172:intron | 10.0% |
!! | AATGTATCTTATTATAAATA+TGG | + | chr1.1:81288048-81288067 | MS.gene75172:intron | 10.0% |
!! | ATTATTAGATAATAATGTTT+GGG | - | chr1.1:81286327-81286346 | None:intergenic | 10.0% |
!! | CAATAATCATAATAAAAAAA+AGG | + | chr1.1:81289584-81289603 | MS.gene75172:intron | 10.0% |
!! | CTAAAAGTTTATATATAAAT+GGG | - | chr1.1:81289064-81289083 | None:intergenic | 10.0% |
!! | CTTAAAAGAAATTATTAAAT+AGG | + | chr1.1:81287603-81287622 | MS.gene75172:intron | 10.0% |
!! | TAACATATACATAAAATTTA+GGG | + | chr1.1:81290356-81290375 | MS.gene75172:intron | 10.0% |
!! | TAATGATATAAAATTATTTG+TGG | - | chr1.1:81287631-81287650 | None:intergenic | 10.0% |
!! | TTATTTGGATAAAAAAAATA+GGG | - | chr1.1:81290020-81290039 | None:intergenic | 10.0% |
!! | TTGAATGAAATTAATTTATA+GGG | - | chr1.1:81287004-81287023 | None:intergenic | 10.0% |
!!! | AAAAAACTTTTTCATTAAAT+TGG | - | chr1.1:81289120-81289139 | None:intergenic | 10.0% |
!!! | CAATTATTTTTATTCAAAAA+AGG | + | chr1.1:81287928-81287947 | MS.gene75172:intron | 10.0% |
!!! | CAGAATTAATTTTTTTTTTT+TGG | - | chr1.1:81290453-81290472 | None:intergenic | 10.0% |
!!! | CTATTTAATAATTTCTTTTA+AGG | - | chr1.1:81287605-81287624 | None:intergenic | 10.0% |
!!! | GAATTAATTTTTTTTTTTTG+GGG | - | chr1.1:81290451-81290470 | None:intergenic | 10.0% |
!! | AACATATACATAAAATTTAG+GGG | + | chr1.1:81290357-81290376 | MS.gene75172:intron | 15.0% |
!! | AAGAATATCTAAGAAATAAT+AGG | + | chr1.1:81288183-81288202 | MS.gene75172:intron | 15.0% |
!! | AATAAATGAACAGTAAAATA+CGG | - | chr1.1:81288322-81288341 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr1.1:81286930-81286949 | MS.gene75172:intron | 15.0% |
!! | AATGTCTATTATAAAATTAG+AGG | - | chr1.1:81289660-81289679 | None:intergenic | 15.0% |
!! | ACTATCAATACATATAAATT+AGG | + | chr1.1:81286487-81286506 | MS.gene75172:intron | 15.0% |
!! | AGAATATCTAAGAAATAATA+GGG | + | chr1.1:81288184-81288203 | MS.gene75172:intron | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | chr1.1:81286738-81286757 | MS.gene75172:intron | 15.0% |
!! | ATGAATGAATGAATTTATAT+AGG | + | chr1.1:81285579-81285598 | MS.gene75172:intron | 15.0% |
!! | ATGTCTATTATAAAATTAGA+GGG | - | chr1.1:81289659-81289678 | None:intergenic | 15.0% |
!! | CCTAAAAGTTTATATATAAA+TGG | - | chr1.1:81289065-81289084 | None:intergenic | 15.0% |
!! | CTATCAATACATATAAATTA+GGG | + | chr1.1:81286488-81286507 | MS.gene75172:intron | 15.0% |
!! | GACATGATTATTAATTTATT+AGG | + | chr1.1:81285341-81285360 | MS.gene75172:intron | 15.0% |
!! | GATTATTAGATAATAATGTT+TGG | - | chr1.1:81286328-81286347 | None:intergenic | 15.0% |
!! | GTAACATATACATAAAATTT+AGG | + | chr1.1:81290355-81290374 | MS.gene75172:intron | 15.0% |
!! | GTTATAGATTTATATATTGA+AGG | + | chr1.1:81291071-81291090 | MS.gene75172:intron | 15.0% |
!! | GTTATTTGGATAAAAAAAAT+AGG | - | chr1.1:81290021-81290040 | None:intergenic | 15.0% |
!! | GTTGAATGAAATTAATTTAT+AGG | - | chr1.1:81287005-81287024 | None:intergenic | 15.0% |
!! | TTTAATGAATAATTTATGCA+TGG | + | chr1.1:81290673-81290692 | MS.gene75172:intron | 15.0% |
!! | TTTATCTTAATCAAAAGAAA+CGG | + | chr1.1:81285309-81285328 | MS.gene75172:intron | 15.0% |
!!! | ATATATTTTAAAAGAACTCA+GGG | - | chr1.1:81289689-81289708 | None:intergenic | 15.0% |
!!! | ATCAATTGTTTCTTATAATA+AGG | + | chr1.1:81288105-81288124 | MS.gene75172:intron | 15.0% |
!!! | CCATTTATATATAAACTTTT+AGG | + | chr1.1:81289062-81289081 | MS.gene75172:intron | 15.0% |
!!! | TATATATTTTAAAAGAACTC+AGG | - | chr1.1:81289690-81289709 | None:intergenic | 15.0% |
!!! | TATTCAAAGACATTTTTAAT+TGG | + | chr1.1:81291382-81291401 | MS.gene75172:CDS | 15.0% |
!!! | TTCTGTTTTTTATTTTATTC+AGG | + | chr1.1:81285369-81285388 | MS.gene75172:intron | 15.0% |
!!! | TTTTTTTTATCCAAATAACA+TGG | + | chr1.1:81290022-81290041 | MS.gene75172:intron | 15.0% |
!! | AAAAAAGGAACAAATACAAA+GGG | + | chr1.1:81287943-81287962 | MS.gene75172:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | chr1.1:81286868-81286887 | MS.gene75172:intron | 20.0% |
!! | AAATAAATAAGCTATGTCAT+GGG | - | chr1.1:81285852-81285871 | None:intergenic | 20.0% |
!! | AACATTAGGAAAACTAATTA+CGG | - | chr1.1:81285147-81285166 | None:intergenic | 20.0% |
!! | ACATGTTACATGTTTATTAT+AGG | + | chr1.1:81285284-81285303 | MS.gene75172:intron | 20.0% |
!! | AGATTATAATCTAATGTCTA+TGG | - | chr1.1:81286373-81286392 | None:intergenic | 20.0% |
!! | AGCAATATAATTCAATTCAA+TGG | + | chr1.1:81289345-81289364 | MS.gene75172:intron | 20.0% |
!! | ATCTTTATGTTTAATTGTGA+TGG | - | chr1.1:81287045-81287064 | None:intergenic | 20.0% |
!! | ATGGTGTTTATTAAGTATTA+CGG | - | chr1.1:81287566-81287585 | None:intergenic | 20.0% |
!! | GATTATTAATTTATTAGGCA+TGG | + | chr1.1:81285346-81285365 | MS.gene75172:intron | 20.0% |
!! | GCATAAAAAGTTGAATTTAA+TGG | - | chr1.1:81285798-81285817 | None:intergenic | 20.0% |
!! | GGAAAAAAATAACAAACATT+AGG | - | chr1.1:81285161-81285180 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | chr1.1:81286867-81286886 | MS.gene75172:intron | 20.0% |
!! | TATTTAACACCACATTAAAT+AGG | - | chr1.1:81287786-81287805 | None:intergenic | 20.0% |
!! | TATTTATGAATTGCAGATTA+GGG | + | chr1.1:81291098-81291117 | MS.gene75172:intron | 20.0% |
!! | TCAAAACAAAAACCAAATAA+TGG | - | chr1.1:81289976-81289995 | None:intergenic | 20.0% |
!! | TCTAACAGAATATTAACTAA+CGG | - | chr1.1:81289735-81289754 | None:intergenic | 20.0% |
!! | TGTCTATTATAAAATTAGAG+GGG | - | chr1.1:81289658-81289677 | None:intergenic | 20.0% |
!! | TTATGTTTAATACAGTTGTT+TGG | + | chr1.1:81290620-81290639 | MS.gene75172:intron | 20.0% |
!! | TTATTCTACAAAAAAGATGT+TGG | - | chr1.1:81285249-81285268 | None:intergenic | 20.0% |
!! | TTATTTATGAATTGCAGATT+AGG | + | chr1.1:81291097-81291116 | MS.gene75172:intron | 20.0% |
!!! | AATAATTTCTTTTAAGGTGT+TGG | - | chr1.1:81287599-81287618 | None:intergenic | 20.0% |
!!! | AATCAAACTTTGTTTTAACA+GGG | - | chr1.1:81286578-81286597 | None:intergenic | 20.0% |
!!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1.1:81286773-81286792 | MS.gene75172:intron | 20.0% |
!!! | AGATTACTATGCATTTTATA+TGG | - | chr1.1:81289178-81289197 | None:intergenic | 20.0% |
!!! | ATAATTTCTTTTAAGGTGTT+GGG | - | chr1.1:81287598-81287617 | None:intergenic | 20.0% |
!!! | ATTCTTTTACATTGATTGAT+AGG | - | chr1.1:81288169-81288188 | None:intergenic | 20.0% |
!!! | CACTATTAATACTTTTTTTG+AGG | - | chr1.1:81291031-81291050 | None:intergenic | 20.0% |
!!! | CATATTTAAATTTTGACGTA+AGG | - | chr1.1:81289282-81289301 | None:intergenic | 20.0% |
!!! | GTCAACTTTTTCTTATAATA+AGG | - | chr1.1:81288006-81288025 | None:intergenic | 20.0% |
!!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr1.1:81288011-81288030 | MS.gene75172:intron | 20.0% |
!!! | TAATCAAACTTTGTTTTAAC+AGG | - | chr1.1:81286579-81286598 | None:intergenic | 20.0% |
!!! | TATATTTTAAAAGAACTCAG+GGG | - | chr1.1:81289688-81289707 | None:intergenic | 20.0% |
!!! | TATTTAATGTGGTGTTAAAT+AGG | + | chr1.1:81287785-81287804 | MS.gene75172:intron | 20.0% |
!!! | TCATAGATTGTTTTTTATAG+TGG | - | chr1.1:81287368-81287387 | None:intergenic | 20.0% |
!!! | TCTTGTTATATACTTGAATA+TGG | + | chr1.1:81287107-81287126 | MS.gene75172:intron | 20.0% |
!!! | TGTATTTTGAGAGTAATAAT+GGG | - | chr1.1:81290561-81290580 | None:intergenic | 20.0% |
!!! | TTTTAGTTTGAGAAATGATA+AGG | - | chr1.1:81289002-81289021 | None:intergenic | 20.0% |
! | AAATTCCAACTAAATATGAG+GGG | - | chr1.1:81288904-81288923 | None:intergenic | 25.0% |
! | AAGTAAGGACTAAATTTACA+AGG | - | chr1.1:81286547-81286566 | None:intergenic | 25.0% |
! | AATAAATAAGCTATGTCATG+GGG | - | chr1.1:81285851-81285870 | None:intergenic | 25.0% |
! | AATTGAAAAGCTTACAACAA+TGG | - | chr1.1:81289824-81289843 | None:intergenic | 25.0% |
! | AATTGGAAATCAATTAGACT+AGG | - | chr1.1:81289103-81289122 | None:intergenic | 25.0% |
! | ACTTATTACTGTATATGTGA+TGG | - | chr1.1:81286280-81286299 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1.1:81286901-81286920 | MS.gene75172:intron | 25.0% |
! | ATAAATAAAATCAGCTGTAG+CGG | + | chr1.1:81290125-81290144 | MS.gene75172:intron | 25.0% |
! | ATAGCTTATTTATTTGTCCT+TGG | + | chr1.1:81285857-81285876 | MS.gene75172:intron | 25.0% |
! | ATATACATAAAATTTAGGGG+AGG | + | chr1.1:81290360-81290379 | MS.gene75172:intron | 25.0% |
! | ATTAAATTACTTACTGTCCA+TGG | - | chr1.1:81285512-81285531 | None:intergenic | 25.0% |
! | CAAAAAAGGAACAAATACAA+AGG | + | chr1.1:81287942-81287961 | MS.gene75172:intron | 25.0% |
! | CAAATAAATAAGCTATGTCA+TGG | - | chr1.1:81285853-81285872 | None:intergenic | 25.0% |
! | CAAGAAGCTACAAAATATAA+CGG | - | chr1.1:81287200-81287219 | None:intergenic | 25.0% |
! | CAATTATGTTCCATGTTATT+TGG | - | chr1.1:81290035-81290054 | None:intergenic | 25.0% |
! | CATTTCACCTATTAAATCAA+GGG | - | chr1.1:81287432-81287451 | None:intergenic | 25.0% |
! | GAAAGAATAGTATGTATGTA+TGG | - | chr1.1:81286179-81286198 | None:intergenic | 25.0% |
! | GAAATTCCAACTAAATATGA+GGG | - | chr1.1:81288905-81288924 | None:intergenic | 25.0% |
! | GACTTTGAGCTAAAAAAAAA+AGG | + | chr1.1:81287454-81287473 | MS.gene75172:intron | 25.0% |
! | GAGAAAAGGGAAAAAAAATA+TGG | - | chr1.1:81288345-81288364 | None:intergenic | 25.0% |
! | GTAATTTCCTTCAAAAACAA+TGG | - | chr1.1:81288935-81288954 | None:intergenic | 25.0% |
! | GTTATATACTTGAATATGGA+GGG | + | chr1.1:81287111-81287130 | MS.gene75172:intron | 25.0% |
! | TCACCATGTAAAATCAAAAA+AGG | - | chr1.1:81291225-81291244 | None:intergenic | 25.0% |
! | TGAAATATGTATAGCATGTT+TGG | - | chr1.1:81287276-81287295 | None:intergenic | 25.0% |
! | TGAAATTCCAACTAAATATG+AGG | - | chr1.1:81288906-81288925 | None:intergenic | 25.0% |
! | TGTACAATCTGTTTCATTTA+TGG | - | chr1.1:81288707-81288726 | None:intergenic | 25.0% |
! | TGTTATATACTTGAATATGG+AGG | + | chr1.1:81287110-81287129 | MS.gene75172:intron | 25.0% |
! | TTATATACTTGAATATGGAG+GGG | + | chr1.1:81287112-81287131 | MS.gene75172:intron | 25.0% |
! | TTGCACAAAAAAAAATTGAG+TGG | + | chr1.1:81290052-81290071 | MS.gene75172:intron | 25.0% |
! | TTGGCTAAATAAGATATGAA+TGG | + | chr1.1:81285876-81285895 | MS.gene75172:intron | 25.0% |
!! | AATACAATCTCCAAATTTTC+TGG | - | chr1.1:81291366-81291385 | None:intergenic | 25.0% |
!! | ATTAATAAGTCACTTTCTGA+AGG | - | chr1.1:81289504-81289523 | None:intergenic | 25.0% |
!! | ATTCATATCTTATTTAGCCA+AGG | - | chr1.1:81285877-81285896 | None:intergenic | 25.0% |
!! | CTTTTTCTTATAATAAGGAC+CGG | - | chr1.1:81288001-81288020 | None:intergenic | 25.0% |
!! | TATTTGTTAGGAGAATCAAT+GGG | + | chr1.1:81286001-81286020 | MS.gene75172:CDS | 25.0% |
!! | TCAACTATGGATTTGAAATA+AGG | - | chr1.1:81289863-81289882 | None:intergenic | 25.0% |
!! | TTGTTTCTTATAATAAGGAC+CGG | + | chr1.1:81288110-81288129 | MS.gene75172:intron | 25.0% |
!!! | AAATATGCCATTGTTTTTGA+AGG | + | chr1.1:81288925-81288944 | MS.gene75172:intron | 25.0% |
!!! | AGACATTTTTAATTGGATAG+AGG | + | chr1.1:81291389-81291408 | MS.gene75172:CDS | 25.0% |
!!! | CTTCCTTTTTTGATTTTACA+TGG | + | chr1.1:81291219-81291238 | MS.gene75172:CDS | 25.0% |
!!! | GTGTATTTTGAGAGTAATAA+TGG | - | chr1.1:81290562-81290581 | None:intergenic | 25.0% |
!!! | TAGTACTGTCTTTTTTATGA+TGG | + | chr1.1:81289763-81289782 | MS.gene75172:intron | 25.0% |
!!! | TCAATTAGACTAGGTTTTAT+AGG | - | chr1.1:81289094-81289113 | None:intergenic | 25.0% |
!!! | TTTCCTTAATTTTGTTTTGC+AGG | + | chr1.1:81285176-81285195 | MS.gene75172:intron | 25.0% |
!!! | TTTTTTGATTTTACATGGTG+AGG | + | chr1.1:81291224-81291243 | MS.gene75172:CDS | 25.0% |
AAATACCCCTCATATTTAGT+TGG | + | chr1.1:81288896-81288915 | MS.gene75172:intron | 30.0% | |
AACAGGGACTAAAATAAGTA+AGG | - | chr1.1:81286562-81286581 | None:intergenic | 30.0% | |
AACATCATCGTATAATAGGA+AGG | + | chr1.1:81290081-81290100 | MS.gene75172:intron | 30.0% | |
AAGAGAGATTAACAGAAAAG+AGG | - | chr1.1:81288418-81288437 | None:intergenic | 30.0% | |
AAGAGGAAAACATTGTTTGT+TGG | - | chr1.1:81288401-81288420 | None:intergenic | 30.0% | |
AAGGACATGGAAAATCATAT+GGG | + | chr1.1:81285655-81285674 | MS.gene75172:CDS | 30.0% | |
ACAATTGAACACCCTAAATT+GGG | + | chr1.1:81287501-81287520 | MS.gene75172:intron | 30.0% | |
ACATCATCGTATAATAGGAA+GGG | + | chr1.1:81290082-81290101 | MS.gene75172:intron | 30.0% | |
ATAGAGGAAAGATCTCAATA+TGG | + | chr1.1:81291405-81291424 | MS.gene75172:CDS | 30.0% | |
ATCAAAGTAAACTCACGTTT+AGG | + | chr1.1:81287171-81287190 | MS.gene75172:intron | 30.0% | |
ATGTATTATACTCCACACAA+TGG | + | chr1.1:81287756-81287775 | MS.gene75172:intron | 30.0% | |
ATTGTGTGGAGTATAATACA+TGG | - | chr1.1:81287757-81287776 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | + | chr1.1:81286641-81286660 | MS.gene75172:intron | 30.0% | |
CAATTTAAGCACCCAATTTA+GGG | - | chr1.1:81287515-81287534 | None:intergenic | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | + | chr1.1:81286900-81286919 | MS.gene75172:intron | 30.0% | |
CCATTTCACCTATTAAATCA+AGG | - | chr1.1:81287433-81287452 | None:intergenic | 30.0% | |
CCTGTTCGAATATAATCATA+CGG | + | chr1.1:81289371-81289390 | MS.gene75172:intron | 30.0% | |
CCTTGATTTAATAGGTGAAA+TGG | + | chr1.1:81287430-81287449 | MS.gene75172:intron | 30.0% | |
GAGAAACATCATCGTATAAT+AGG | + | chr1.1:81290077-81290096 | MS.gene75172:intron | 30.0% | |
GCAATTTGAATAAAGTCACA+CGG | + | chr1.1:81289540-81289559 | MS.gene75172:intron | 30.0% | |
GCACATTATAGTATATGATG+TGG | - | chr1.1:81286155-81286174 | None:intergenic | 30.0% | |
GTATATGGCATAGATTATGA+AGG | + | chr1.1:81285636-81285655 | MS.gene75172:CDS | 30.0% | |
TAAAAAAAAAAGGAGAGACG+TGG | + | chr1.1:81287464-81287483 | MS.gene75172:intron | 30.0% | |
TAAACTCAGTCGTAAAAAGA+AGG | - | chr1.1:81290657-81290676 | None:intergenic | 30.0% | |
TCAAAATTCTTAACAAGACC+AGG | - | chr1.1:81285684-81285703 | None:intergenic | 30.0% | |
TCAATTTAAGCACCCAATTT+AGG | - | chr1.1:81287516-81287535 | None:intergenic | 30.0% | |
TCATTTACATGATCTTGTCA+CGG | + | chr1.1:81287296-81287315 | MS.gene75172:intron | 30.0% | |
TGATATCAAATTGCTGCTAA+CGG | + | chr1.1:81290297-81290316 | MS.gene75172:intron | 30.0% | |
TGGATAAAAAAAATAGGGTG+CGG | - | chr1.1:81290015-81290034 | None:intergenic | 30.0% | |
TGTATTATACTCCACACAAT+GGG | + | chr1.1:81287757-81287776 | MS.gene75172:intron | 30.0% | |
TTGTGTGGAGTATAATACAT+GGG | - | chr1.1:81287756-81287775 | None:intergenic | 30.0% | |
! | AAGAAGATGAGGTATTTGTT+AGG | + | chr1.1:81285989-81286008 | MS.gene75172:CDS | 30.0% |
! | ACTAACGGTGTTAAATGAAA+AGG | - | chr1.1:81289720-81289739 | None:intergenic | 30.0% |
! | CACATGAAGATTAATGCTTT+TGG | - | chr1.1:81285460-81285479 | None:intergenic | 30.0% |
! | CTAACGGTGTTAAATGAAAA+GGG | - | chr1.1:81289719-81289738 | None:intergenic | 30.0% |
! | CTTCTACTATGATAATGAGA+AGG | + | chr1.1:81289411-81289430 | MS.gene75172:intron | 30.0% |
! | GAAAAGCCAGGTATAAATTT+TGG | + | chr1.1:81290232-81290251 | MS.gene75172:intron | 30.0% |
! | GTATTTGTTAGGAGAATCAA+TGG | + | chr1.1:81286000-81286019 | MS.gene75172:CDS | 30.0% |
! | TTGTTGATGTACTTGCTAAA+CGG | + | chr1.1:81290591-81290610 | MS.gene75172:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr1.1:81286531-81286550 | None:intergenic | 30.0% |
!! | TGATGTTGGTGTTATTTCTT+TGG | + | chr1.1:81290201-81290220 | MS.gene75172:intron | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1.1:81286532-81286551 | None:intergenic | 30.0% |
AAAAAGCCAGAATATTGGGA+CGG | + | chr1.1:81286052-81286071 | MS.gene75172:CDS | 35.0% | |
AACAGGTTATGAACTTAGCA+GGG | + | chr1.1:81291158-81291177 | MS.gene75172:CDS | 35.0% | |
AACTGACATCAAATACGAAG+AGG | + | chr1.1:81285206-81285225 | MS.gene75172:CDS | 35.0% | |
AAGAAAGAAACGTGCAAACA+CGG | - | chr1.1:81286227-81286246 | None:intergenic | 35.0% | |
AAGACACTGAAATTATACCC+TGG | + | chr1.1:81291309-81291328 | MS.gene75172:CDS | 35.0% | |
AAGATTCTGCAGGTTTCTTA+CGG | - | chr1.1:81289918-81289937 | None:intergenic | 35.0% | |
AAGTAAGGACTAAACTCACA+AGG | + | chr1.1:81286945-81286964 | MS.gene75172:intron | 35.0% | |
ACATGGAAATAAGATTCTGC+AGG | - | chr1.1:81289928-81289947 | None:intergenic | 35.0% | |
ACGTGATATTGAGATAACGA+AGG | - | chr1.1:81289463-81289482 | None:intergenic | 35.0% | |
ATATACAGTGATGTCGTGAT+CGG | - | chr1.1:81288560-81288579 | None:intergenic | 35.0% | |
ATATACCTGTTGTCTGACTT+CGG | - | chr1.1:81290955-81290974 | None:intergenic | 35.0% | |
ATCTCAGCCCTTGATTTAAT+AGG | + | chr1.1:81287422-81287441 | MS.gene75172:intron | 35.0% | |
ATGCAAAATGAAGACAGAGA+GGG | + | chr1.1:81287700-81287719 | MS.gene75172:intron | 35.0% | |
ATGCAACGTCAATGATATCT+TGG | - | chr1.1:81290923-81290942 | None:intergenic | 35.0% | |
ATGTGGCATGGTTTATTGTA+TGG | + | chr1.1:81291333-81291352 | MS.gene75172:CDS | 35.0% | |
CAACACAAATACGACATCAA+GGG | - | chr1.1:81288965-81288984 | None:intergenic | 35.0% | |
CACAATTGAACACCCTAAAT+TGG | + | chr1.1:81287500-81287519 | MS.gene75172:intron | 35.0% | |
CAGACACACATGTGAAATAT+GGG | - | chr1.1:81288224-81288243 | None:intergenic | 35.0% | |
CAGAGAATAAGAAGAAGATG+AGG | + | chr1.1:81285978-81285997 | MS.gene75172:CDS | 35.0% | |
CAGAGTCCAAAATTTATACC+TGG | - | chr1.1:81290241-81290260 | None:intergenic | 35.0% | |
CCGTATGATTATATTCGAAC+AGG | - | chr1.1:81289374-81289393 | None:intergenic | 35.0% | |
CTCATCTTCTTCTTATTCTC+TGG | - | chr1.1:81285980-81285999 | None:intergenic | 35.0% | |
GAAGGACATGGAAAATCATA+TGG | + | chr1.1:81285654-81285673 | MS.gene75172:CDS | 35.0% | |
GATTTCGTATTGAATTCACG+AGG | + | chr1.1:81285391-81285410 | MS.gene75172:CDS | 35.0% | |
GCAAATCAATACTGCTTCAA+AGG | + | chr1.1:81291120-81291139 | MS.gene75172:CDS | 35.0% | |
GCATTAATCTTCATGTGTCA+TGG | + | chr1.1:81285463-81285482 | MS.gene75172:CDS | 35.0% | |
GGCAGAAATATTCAATCCTT+TGG | - | chr1.1:81289803-81289822 | None:intergenic | 35.0% | |
GTATTATACTCCACACAATG+GGG | + | chr1.1:81287758-81287777 | MS.gene75172:intron | 35.0% | |
TACCACATATGCTGCTAAAA+TGG | - | chr1.1:81285731-81285750 | None:intergenic | 35.0% | |
TCAGACACACATGTGAAATA+TGG | - | chr1.1:81288225-81288244 | None:intergenic | 35.0% | |
TCGCCTGCAAAACAAAATTA+AGG | - | chr1.1:81285182-81285201 | None:intergenic | 35.0% | |
TGAAATTATACCCTGGAATG+TGG | + | chr1.1:81291316-81291335 | MS.gene75172:CDS | 35.0% | |
TGCAACGTCAATGATATCTT+GGG | - | chr1.1:81290922-81290941 | None:intergenic | 35.0% | |
TGTAATTGTTTGCTCACTGA+TGG | - | chr1.1:81291267-81291286 | None:intergenic | 35.0% | |
TGTCATTAAAAGAGACCTCA+GGG | - | chr1.1:81289628-81289647 | None:intergenic | 35.0% | |
TTAAATCAAGGGCTGAGATT+TGG | - | chr1.1:81287421-81287440 | None:intergenic | 35.0% | |
TTACGGTAAAATGAGTGATG+TGG | - | chr1.1:81287549-81287568 | None:intergenic | 35.0% | |
TTCTTATAATAAGGACCGGA+GGG | + | chr1.1:81288114-81288133 | MS.gene75172:intron | 35.0% | |
TTCTTATAATAAGGACCGGA+GGG | - | chr1.1:81288133-81288114 | None:intergenic | 35.0% | |
TTCTTATTGAATACTCCCTC+CGG | - | chr1.1:81288132-81288151 | None:intergenic | 35.0% | |
TTTCTTATAATAAGGACCGG+AGG | + | chr1.1:81288113-81288132 | MS.gene75172:intron | 35.0% | |
TTTCTTATAATAAGGACCGG+AGG | - | chr1.1:81288132-81288113 | None:intergenic | 35.0% | |
TTTGAGAGCAGTTTCAACTA+TGG | - | chr1.1:81289876-81289895 | None:intergenic | 35.0% | |
! | ACAATCTCCAAATTTTCTGG+TGG | - | chr1.1:81291363-81291382 | None:intergenic | 35.0% |
! | CAATTTAGGGTGTTCAATTG+TGG | - | chr1.1:81287502-81287521 | None:intergenic | 35.0% |
! | TATCCTCACATTTTCTTCTC+AGG | - | chr1.1:81287857-81287876 | None:intergenic | 35.0% |
! | TCTCTGTCTTCATTTTGCAT+GGG | - | chr1.1:81287700-81287719 | None:intergenic | 35.0% |
!! | AATGGTGGATATGCAGTATA+TGG | + | chr1.1:81285621-81285640 | MS.gene75172:CDS | 35.0% |
!! | ATATCGACTTCTGACCTATT+GGG | + | chr1.1:81288576-81288595 | MS.gene75172:intron | 35.0% |
!! | ATTTTAAAAGAACTCAGGGG+AGG | - | chr1.1:81289685-81289704 | None:intergenic | 35.0% |
!! | CACAAGGTCGCTATTTTATA+GGG | + | chr1.1:81286961-81286980 | MS.gene75172:intron | 35.0% |
!! | TATATCGACTTCTGACCTAT+TGG | + | chr1.1:81288575-81288594 | MS.gene75172:intron | 35.0% |
!! | TCACAAGGTCGCTATTTTAT+AGG | + | chr1.1:81286960-81286979 | MS.gene75172:intron | 35.0% |
!! | TGTTGGTGTTATTTCTTTGG+AGG | + | chr1.1:81290204-81290223 | MS.gene75172:intron | 35.0% |
!! | TTTTATGCAACTTGCTCACA+TGG | - | chr1.1:81289945-81289964 | None:intergenic | 35.0% |
!!! | TTTGCGATAATTTTTTGCGG+AGG | + | chr1.1:81286776-81286795 | MS.gene75172:intron | 35.0% |
AAACGAGATCTGAATAGCAG+CGG | + | chr1.1:81288646-81288665 | MS.gene75172:intron | 40.0% | |
AATAAACCATGCCACATTCC+AGG | - | chr1.1:81291330-81291349 | None:intergenic | 40.0% | |
AATAGGGTGCGGTTCATAAT+TGG | - | chr1.1:81290004-81290023 | None:intergenic | 40.0% | |
ACAGCAAGAAGACTTGCAAA+TGG | + | chr1.1:81285603-81285622 | MS.gene75172:CDS | 40.0% | |
ACCGGAAAAAGCCAGAATAT+TGG | + | chr1.1:81286047-81286066 | MS.gene75172:CDS | 40.0% | |
ACGTCAATGATATCTTGGGT+TGG | - | chr1.1:81290918-81290937 | None:intergenic | 40.0% | |
AGACGAATCACACAACGAAT+TGG | - | chr1.1:81290176-81290195 | None:intergenic | 40.0% | |
AGATTCTGCAGGTTTCTTAC+GGG | - | chr1.1:81289917-81289936 | None:intergenic | 40.0% | |
AGTACAGCGCACATCAAATT+TGG | + | chr1.1:81286300-81286319 | MS.gene75172:intron | 40.0% | |
ATAAACCATGCCACATTCCA+GGG | - | chr1.1:81291329-81291348 | None:intergenic | 40.0% | |
ATACGCATCACAAATGCGTT+TGG | - | chr1.1:81290852-81290871 | None:intergenic | 40.0% | |
ATATGATCATGCACTCCACT+AGG | + | chr1.1:81287874-81287893 | MS.gene75172:intron | 40.0% | |
CACATATGCTGCTAAAATGG+CGG | - | chr1.1:81285728-81285747 | None:intergenic | 40.0% | |
CATCCTGAGAAGAAAATGTG+AGG | + | chr1.1:81287851-81287870 | MS.gene75172:intron | 40.0% | |
CATCGTATAATAGGAAGGGA+CGG | + | chr1.1:81290086-81290105 | MS.gene75172:intron | 40.0% | |
CATGCAAAATGAAGACAGAG+AGG | + | chr1.1:81287699-81287718 | MS.gene75172:intron | 40.0% | |
CCAACACAAATACGACATCA+AGG | - | chr1.1:81288966-81288985 | None:intergenic | 40.0% | |
CCGGAAAAAGCCAGAATATT+GGG | + | chr1.1:81286048-81286067 | MS.gene75172:CDS | 40.0% | |
CCTTGATGTCGTATTTGTGT+TGG | + | chr1.1:81288963-81288982 | MS.gene75172:intron | 40.0% | |
CGTCAATGATATCTTGGGTT+GGG | - | chr1.1:81290917-81290936 | None:intergenic | 40.0% | |
GAACAGGTTATGAACTTAGC+AGG | + | chr1.1:81291157-81291176 | MS.gene75172:CDS | 40.0% | |
GACGAATCACACAACGAATT+GGG | - | chr1.1:81290175-81290194 | None:intergenic | 40.0% | |
GATGGAACAACAAACATGTG+TGG | - | chr1.1:81286262-81286281 | None:intergenic | 40.0% | |
GGCATAGATTATGAAGGACA+TGG | + | chr1.1:81285642-81285661 | MS.gene75172:CDS | 40.0% | |
GTATAATACATGGGTGGCTA+TGG | - | chr1.1:81287747-81287766 | None:intergenic | 40.0% | |
GTCATTAAAAGAGACCTCAG+GGG | - | chr1.1:81289627-81289646 | None:intergenic | 40.0% | |
TATACCTGTTGTCTGACTTC+GGG | - | chr1.1:81290954-81290973 | None:intergenic | 40.0% | |
TATGATCATGCACTCCACTA+GGG | + | chr1.1:81287875-81287894 | MS.gene75172:intron | 40.0% | |
TCATAACCTGTTCTCAAACG+AGG | - | chr1.1:81291150-81291169 | None:intergenic | 40.0% | |
TGTCTGAGAATTGAGATGAG+AGG | + | chr1.1:81288238-81288257 | MS.gene75172:intron | 40.0% | |
TGTGGAGTATAATACATGGG+TGG | - | chr1.1:81287753-81287772 | None:intergenic | 40.0% | |
TTCACGAGGAATGAAGCTAT+TGG | + | chr1.1:81285405-81285424 | MS.gene75172:CDS | 40.0% | |
TTCGTTGTGTGATTCGTCTA+TGG | + | chr1.1:81290177-81290196 | MS.gene75172:intron | 40.0% | |
TTGTTAGGAGAATCAATGGG+AGG | + | chr1.1:81286004-81286023 | MS.gene75172:CDS | 40.0% | |
! | AATGGGGTGCCTATTTAATG+TGG | + | chr1.1:81287774-81287793 | MS.gene75172:intron | 40.0% |
! | ATGTGCTACTGTGTGAGAAA+AGG | - | chr1.1:81288359-81288378 | None:intergenic | 40.0% |
! | CTCTCTGTCTTCATTTTGCA+TGG | - | chr1.1:81287701-81287720 | None:intergenic | 40.0% |
! | GATTCGTCTATGGTTGATGT+TGG | + | chr1.1:81290187-81290206 | MS.gene75172:intron | 40.0% |
! | GATTTGGAGTCTCATGTGAT+AGG | - | chr1.1:81287405-81287424 | None:intergenic | 40.0% |
! | GCTTTTGGATTTTCGTTTGC+AGG | - | chr1.1:81285445-81285464 | None:intergenic | 40.0% |
! | GGAAAATCATATGGGTTACC+TGG | + | chr1.1:81285663-81285682 | MS.gene75172:CDS | 40.0% |
! | GTGTCATTAAAAGAGACCTC+AGG | - | chr1.1:81289629-81289648 | None:intergenic | 40.0% |
! | TGTGCTACTGTGTGAGAAAA+GGG | - | chr1.1:81288358-81288377 | None:intergenic | 40.0% |
! | TTAGGGTGTTCAATTGTGGA+TGG | - | chr1.1:81287498-81287517 | None:intergenic | 40.0% |
!!! | ATATTGGGACGGTGCTATTT+TGG | + | chr1.1:81286063-81286082 | MS.gene75172:CDS | 40.0% |
!!! | CCCAATATTCTGGCTTTTTC+CGG | - | chr1.1:81286051-81286070 | None:intergenic | 40.0% |
AATTACACTGATCTCCCCTG+AGG | + | chr1.1:81289610-81289629 | MS.gene75172:intron | 45.0% | |
ACTCTATGCCCAAAAGTCAG+AGG | - | chr1.1:81289437-81289456 | None:intergenic | 45.0% | |
AGGTCTTTGTCAAGTGAGAG+GGG | + | chr1.1:81290326-81290345 | MS.gene75172:intron | 45.0% | |
AGTGTGATACATACTCCCTC+CGG | + | chr1.1:81287979-81287998 | MS.gene75172:intron | 45.0% | |
ATACCTGTTGTCTGACTTCG+GGG | - | chr1.1:81290953-81290972 | None:intergenic | 45.0% | |
ATAGCACCGTCCCAATATTC+TGG | - | chr1.1:81286061-81286080 | None:intergenic | 45.0% | |
ATCAAATTGCTGCTAACGGC+AGG | + | chr1.1:81290301-81290320 | MS.gene75172:intron | 45.0% | |
CAACTCTCTCTTTCTCTCAC+CGG | + | chr1.1:81288442-81288461 | MS.gene75172:intron | 45.0% | |
CACCATTGTGGATGGTGTAA+GGG | + | chr1.1:81287817-81287836 | MS.gene75172:intron | 45.0% | |
CAGGGTTGCTACACAAATTG+AGG | + | chr1.1:81291176-81291195 | MS.gene75172:CDS | 45.0% | |
CATGTGTCATGGATATGCCA+TGG | + | chr1.1:81285474-81285493 | MS.gene75172:CDS | 45.0% | |
CCTGGGAAAGAAAAAGAGTG+AGG | + | chr1.1:81290267-81290286 | MS.gene75172:intron | 45.0% | |
CGGTGAGAGCTAATGTTCAA+AGG | - | chr1.1:81288540-81288559 | None:intergenic | 45.0% | |
CTTACACCATCCACAATGGT+GGG | - | chr1.1:81287818-81287837 | None:intergenic | 45.0% | |
CTTCTCACCACTGTCATCAT+CGG | - | chr1.1:81288730-81288749 | None:intergenic | 45.0% | |
CTTCTGACCTATTGGGTTTC+AGG | + | chr1.1:81288583-81288602 | MS.gene75172:intron | 45.0% | |
GAGGTCTTTGTCAAGTGAGA+GGG | + | chr1.1:81290325-81290344 | MS.gene75172:intron | 45.0% | |
GATGATGACAGTGGTGAGAA+GGG | + | chr1.1:81288729-81288748 | MS.gene75172:intron | 45.0% | |
GCAAAGCTAACCTTGCACAT+TGG | - | chr1.1:81286094-81286113 | None:intergenic | 45.0% | |
GCAAGAAGACTTGCAAATGG+TGG | + | chr1.1:81285606-81285625 | MS.gene75172:CDS | 45.0% | |
GGGTGTGAGAGATATACATG+AGG | + | chr1.1:81287895-81287914 | MS.gene75172:intron | 45.0% | |
GGTAAACCTCGTTTGAGAAC+AGG | + | chr1.1:81291141-81291160 | MS.gene75172:CDS | 45.0% | |
GGTGCGGTTCATAATTGGTT+CGG | - | chr1.1:81289999-81290018 | None:intergenic | 45.0% | |
GTATATCTCTCACACCCTAG+TGG | - | chr1.1:81287892-81287911 | None:intergenic | 45.0% | |
GTTGGGACTATTTGCCATGT+GGG | - | chr1.1:81290900-81290919 | None:intergenic | 45.0% | |
TAAATAGGCACCCCATTGTG+TGG | - | chr1.1:81287771-81287790 | None:intergenic | 45.0% | |
TAAGCAAAGTTGCTCCCACA+TGG | + | chr1.1:81290883-81290902 | MS.gene75172:CDS | 45.0% | |
TACCCTTACACCATCCACAA+TGG | - | chr1.1:81287822-81287841 | None:intergenic | 45.0% | |
TCAAATTGCTGCTAACGGCA+GGG | + | chr1.1:81290302-81290321 | MS.gene75172:intron | 45.0% | |
TGAAGCTATTGGCAACCAGT+TGG | + | chr1.1:81285416-81285435 | MS.gene75172:CDS | 45.0% | |
TGAGAGAAAGAGAGAGTTGC+AGG | - | chr1.1:81288441-81288460 | None:intergenic | 45.0% | |
TGGTGAGCCACCAGAAAATT+TGG | + | chr1.1:81291353-81291372 | MS.gene75172:CDS | 45.0% | |
TTATACCCTGGAATGTGGCA+TGG | + | chr1.1:81291321-81291340 | MS.gene75172:CDS | 45.0% | |
TTCGTTTGCAGGAATCCAAC+TGG | - | chr1.1:81285434-81285453 | None:intergenic | 45.0% | |
TTGGAGGAAACTGAAAAGCC+AGG | + | chr1.1:81290220-81290239 | MS.gene75172:intron | 45.0% | |
TTGTACACCGATGATGACAG+TGG | + | chr1.1:81288720-81288739 | MS.gene75172:intron | 45.0% | |
TTTGGACTCTGACTGTTCCT+GGG | + | chr1.1:81290250-81290269 | MS.gene75172:intron | 45.0% | |
! | ATGAGAAGGCCTCTGACTTT+TGG | + | chr1.1:81289425-81289444 | MS.gene75172:intron | 45.0% |
! | CCTCACTCTTTTTCTTTCCC+AGG | - | chr1.1:81290270-81290289 | None:intergenic | 45.0% |
! | GGCAGTCTTTTCTGTACCAA+AGG | + | chr1.1:81289784-81289803 | MS.gene75172:intron | 45.0% |
! | TGAGAAGGCCTCTGACTTTT+GGG | + | chr1.1:81289426-81289445 | MS.gene75172:intron | 45.0% |
! | TTTTGGACTCTGACTGTTCC+TGG | + | chr1.1:81290249-81290268 | MS.gene75172:intron | 45.0% |
!! | AGCTGTAGCGGACAAAAAGA+TGG | + | chr1.1:81290137-81290156 | MS.gene75172:intron | 45.0% |
!! | AGGTGTTGGGTTGCAGAAAA+TGG | - | chr1.1:81287585-81287604 | None:intergenic | 45.0% |
!! | CGCCATTTTAGCAGCATATG+TGG | + | chr1.1:81285726-81285745 | MS.gene75172:CDS | 45.0% |
!! | GCTGTAGCGGACAAAAAGAT+GGG | + | chr1.1:81290138-81290157 | MS.gene75172:intron | 45.0% |
!! | AATAATCATAATAAAAAAAA+GGG | + | chr1.1:81289585-81289604 | MS.gene75172:intron | 5.0% |
!! | TTTATTAAGATTTATTAAAT+GGG | + | chr1.1:81287673-81287692 | MS.gene75172:intron | 5.0% |
!!! | AGAATTAATTTTTTTTTTTT+GGG | - | chr1.1:81290452-81290471 | None:intergenic | 5.0% |
!!! | TTTTATTAAGATTTATTAAA+TGG | + | chr1.1:81287672-81287691 | MS.gene75172:intron | 5.0% |
AAGGCACAGTGAGAGAGAGT+AGG | - | chr1.1:81288521-81288540 | None:intergenic | 50.0% | |
ACATGGGTGGCTATGGAGAA+GGG | - | chr1.1:81287740-81287759 | None:intergenic | 50.0% | |
ACCTATTGGGTTTCAGGAGG+CGG | + | chr1.1:81288589-81288608 | MS.gene75172:intron | 50.0% | |
AGAATCAATGGGAGGAGCTG+TGG | + | chr1.1:81286012-81286031 | MS.gene75172:CDS | 50.0% | |
ATCTGAATAGCAGCGGTCGA+CGG | + | chr1.1:81288653-81288672 | MS.gene75172:intron | 50.0% | |
CAAATTGCTGCTAACGGCAG+GGG | + | chr1.1:81290303-81290322 | MS.gene75172:intron | 50.0% | |
CAGAGGAGAACGATGGTTGT+CGG | + | chr1.1:81288618-81288637 | MS.gene75172:intron | 50.0% | |
CATGGAATGCAGCATCACCA+TGG | + | chr1.1:81285492-81285511 | MS.gene75172:CDS | 50.0% | |
CCACCATTGTGGATGGTGTA+AGG | + | chr1.1:81287816-81287835 | MS.gene75172:intron | 50.0% | |
CCTTACACCATCCACAATGG+TGG | - | chr1.1:81287819-81287838 | None:intergenic | 50.0% | |
CGATGATGACAGTGGTGAGA+AGG | + | chr1.1:81288728-81288747 | MS.gene75172:intron | 50.0% | |
CTGACCTATTGGGTTTCAGG+AGG | + | chr1.1:81288586-81288605 | MS.gene75172:intron | 50.0% | |
GAGGTGAGTGTATGTGAGAG+GGG | + | chr1.1:81290379-81290398 | MS.gene75172:intron | 50.0% | |
GCTATGGAGAAGGGTGACTA+TGG | - | chr1.1:81287731-81287750 | None:intergenic | 50.0% | |
GGAGGTCTTTGTCAAGTGAG+AGG | + | chr1.1:81290324-81290343 | MS.gene75172:intron | 50.0% | |
GGAGGTGAGTGTATGTGAGA+GGG | + | chr1.1:81290378-81290397 | MS.gene75172:intron | 50.0% | |
GGTTGGGACTATTTGCCATG+TGG | - | chr1.1:81290901-81290920 | None:intergenic | 50.0% | |
GTCGACGACATAACAGTTGC+CGG | - | chr1.1:81288464-81288483 | None:intergenic | 50.0% | |
GTGGTGACTGATGAGGATGA+CGG | + | chr1.1:81288754-81288773 | MS.gene75172:intron | 50.0% | |
TACATGGGTGGCTATGGAGA+AGG | - | chr1.1:81287741-81287760 | None:intergenic | 50.0% | |
TCTTTGTCAAGTGAGAGGGG+AGG | + | chr1.1:81290329-81290348 | MS.gene75172:intron | 50.0% | |
TGAGAGAGAGTAGGAGAGAG+TGG | - | chr1.1:81288512-81288531 | None:intergenic | 50.0% | |
TTTGGCTGCACCAATGTGCA+AGG | + | chr1.1:81286081-81286100 | MS.gene75172:CDS | 50.0% | |
! | CATGGTGATGCTGCATTCCA+TGG | - | chr1.1:81285494-81285513 | None:intergenic | 50.0% |
! | GATGACGGTGGTTATGTGGA+CGG | + | chr1.1:81288769-81288788 | MS.gene75172:intron | 50.0% |
! | TGAGGATGACGGTGGTTATG+TGG | + | chr1.1:81288765-81288784 | MS.gene75172:intron | 50.0% |
!! | GGAGGGGTGTATTTTCTACG+TGG | + | chr1.1:81287128-81287147 | MS.gene75172:intron | 50.0% |
ACCGCCTCCTGAAACCCAAT+AGG | - | chr1.1:81288593-81288612 | None:intergenic | 55.0% | |
ACGGTGGTTATGTGGACGGA+GGG | + | chr1.1:81288773-81288792 | MS.gene75172:intron | 55.0% | |
AGGAGAACGATGGTTGTCGG+AGG | + | chr1.1:81288621-81288640 | MS.gene75172:intron | 55.0% | |
AGTCCCCGAAGTCAGACAAC+AGG | + | chr1.1:81290947-81290966 | MS.gene75172:CDS | 55.0% | |
ATGGGAGGGTGGTAGAAGGA+CGG | + | chr1.1:81288816-81288835 | MS.gene75172:intron | 55.0% | |
GATGACAGTGGTGAGAAGGG+TGG | + | chr1.1:81288732-81288751 | MS.gene75172:intron | 55.0% | |
GGGAGGTGAGTGTATGTGAG+AGG | + | chr1.1:81290377-81290396 | MS.gene75172:intron | 55.0% | |
GTGAGTGTATGTGAGAGGGG+AGG | + | chr1.1:81290382-81290401 | MS.gene75172:intron | 55.0% | |
GTGGTTGCAGAGGAGAACGA+TGG | + | chr1.1:81288611-81288630 | MS.gene75172:intron | 55.0% | |
TATTGGGTTTCAGGAGGCGG+TGG | + | chr1.1:81288592-81288611 | MS.gene75172:intron | 55.0% | |
! | AAGGGTGGTGGTGACTGATG+AGG | + | chr1.1:81288747-81288766 | MS.gene75172:intron | 55.0% |
! | AGGTGAAGCACCCACCATTG+TGG | + | chr1.1:81287805-81287824 | MS.gene75172:intron | 55.0% |
! | GAAGCACCCACCATTGTGGA+TGG | + | chr1.1:81287809-81287828 | MS.gene75172:intron | 55.0% |
! | GTGACTGATGAGGATGACGG+TGG | + | chr1.1:81288757-81288776 | MS.gene75172:intron | 55.0% |
!! | CTGTGGCTCTGCTTTTGCAC+CGG | + | chr1.1:81286029-81286048 | MS.gene75172:CDS | 55.0% |
!! | TAGAAGGACGGTGGTGCTGT+TGG | + | chr1.1:81288828-81288847 | MS.gene75172:intron | 55.0% |
ATTGCTGCTAACGGCAGGGG+AGG | + | chr1.1:81290306-81290325 | MS.gene75172:intron | 60.0% | |
CGTCGCTCTCTTGCTCTCAC+CGG | + | chr1.1:81288483-81288502 | MS.gene75172:intron | 60.0% | |
GACAGTGGTGAGAAGGGTGG+TGG | + | chr1.1:81288735-81288754 | MS.gene75172:intron | 60.0% | |
GACGGTGGTTATGTGGACGG+AGG | + | chr1.1:81288772-81288791 | MS.gene75172:intron | 60.0% | |
GAGTAGGAGAGAGTGGTCGC+CGG | - | chr1.1:81288505-81288524 | None:intergenic | 60.0% | |
GGTCATGGGAGGGTGGTAGA+AGG | + | chr1.1:81288812-81288831 | MS.gene75172:intron | 60.0% | |
GGTTATGTGGACGGAGGGTC+CGG | + | chr1.1:81288778-81288797 | MS.gene75172:intron | 60.0% | |
CCATGACCGCCTCTCACCAC+CGG | - | chr1.1:81288800-81288819 | None:intergenic | 65.0% | |
CGGTGGTGAGAGGCGGTCAT+GGG | + | chr1.1:81288798-81288817 | MS.gene75172:intron | 65.0% | |
GGAGGGTGGTAGAAGGACGG+TGG | + | chr1.1:81288819-81288838 | MS.gene75172:intron | 65.0% | |
GGTGAGAGGCGGTCATGGGA+GGG | + | chr1.1:81288802-81288821 | MS.gene75172:intron | 65.0% | |
TATGTGGACGGAGGGTCCGG+TGG | + | chr1.1:81288781-81288800 | MS.gene75172:intron | 65.0% | |
TCAGGAGGCGGTGGTTGCAG+AGG | + | chr1.1:81288601-81288620 | MS.gene75172:intron | 65.0% | |
TGGTGAGAGGCGGTCATGGG+AGG | + | chr1.1:81288801-81288820 | MS.gene75172:intron | 65.0% | |
ACGGAGGGTCCGGTGGTGAG+AGG | + | chr1.1:81288788-81288807 | MS.gene75172:intron | 70.0% | |
CCGGTGGTGAGAGGCGGTCA+TGG | + | chr1.1:81288797-81288816 | MS.gene75172:intron | 70.0% | |
GAGAGGCGGTCATGGGAGGG+TGG | + | chr1.1:81288805-81288824 | MS.gene75172:intron | 70.0% | |
GAGGGTCCGGTGGTGAGAGG+CGG | + | chr1.1:81288791-81288810 | MS.gene75172:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 81285099 | 81291482 | 81285099 | ID=MS.gene75172 |
chr1.1 | mRNA | 81285099 | 81291482 | 81285099 | ID=MS.gene75172.t1;Parent=MS.gene75172 |
chr1.1 | exon | 81285099 | 81285101 | 81285099 | ID=MS.gene75172.t1.exon1;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81285099 | 81285101 | 81285099 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81285198 | 81285227 | 81285198 | ID=MS.gene75172.t1.exon2;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81285198 | 81285227 | 81285198 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81285391 | 81285517 | 81285391 | ID=MS.gene75172.t1.exon3;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81285391 | 81285517 | 81285391 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81285601 | 81285747 | 81285601 | ID=MS.gene75172.t1.exon4;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81285601 | 81285747 | 81285601 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81285972 | 81286102 | 81285972 | ID=MS.gene75172.t1.exon5;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81285972 | 81286102 | 81285972 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81290831 | 81290968 | 81290831 | ID=MS.gene75172.t1.exon6;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81290831 | 81290968 | 81290831 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
chr1.1 | exon | 81291114 | 81291482 | 81291114 | ID=MS.gene75172.t1.exon7;Parent=MS.gene75172.t1 |
chr1.1 | CDS | 81291114 | 81291482 | 81291114 | ID=cds.MS.gene75172.t1;Parent=MS.gene75172.t1 |
Gene Sequence |
Protein sequence |