Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066454.t1 | XP_013470468.1 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 4.00E-177 | 630.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066454.t1 | Q9C942 | 36.4 | 280 | 176 | 2 | 21 | 298 | 50 | 329 | 8.8e-48 | 192.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066454.t1 | A0A072VS52 | 97.8 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 2.9e-177 | 630.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54469 | MS.gene066454 | PPI |
| MS.gene33751 | MS.gene066454 | PPI |
| MS.gene76909 | MS.gene066454 | PPI |
| MS.gene052529 | MS.gene066454 | PPI |
| MS.gene32176 | MS.gene066454 | PPI |
| MS.gene029108 | MS.gene066454 | PPI |
| MS.gene75172 | MS.gene066454 | PPI |
| MS.gene80965 | MS.gene066454 | PPI |
| MS.gene92221 | MS.gene066454 | PPI |
| MS.gene39411 | MS.gene066454 | PPI |
| MS.gene90834 | MS.gene066454 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066454.t1 | MTR_1g115535 | 97.771 | 314 | 7 | 0 | 1 | 314 | 1 | 314 | 0.0 | 644 |
| MS.gene066454.t1 | MTR_1g115535 | 97.764 | 313 | 7 | 0 | 2 | 314 | 6 | 318 | 0.0 | 642 |
| MS.gene066454.t1 | MTR_1g088470 | 52.881 | 295 | 138 | 1 | 8 | 302 | 6 | 299 | 2.55e-121 | 351 |
| MS.gene066454.t1 | MTR_7g108770 | 51.370 | 292 | 141 | 1 | 4 | 295 | 2 | 292 | 5.80e-115 | 336 |
| MS.gene066454.t1 | MTR_6g025610 | 47.260 | 292 | 154 | 0 | 7 | 298 | 41 | 332 | 2.06e-94 | 283 |
| MS.gene066454.t1 | MTR_6g018490 | 46.918 | 292 | 155 | 0 | 7 | 298 | 51 | 342 | 3.64e-94 | 283 |
| MS.gene066454.t1 | MTR_5g056550 | 46.528 | 288 | 153 | 1 | 7 | 293 | 104 | 391 | 4.09e-91 | 277 |
| MS.gene066454.t1 | MTR_7g007260 | 45.455 | 286 | 156 | 0 | 7 | 292 | 52 | 337 | 2.38e-87 | 265 |
| MS.gene066454.t1 | MTR_1g110670 | 43.369 | 279 | 157 | 1 | 16 | 293 | 79 | 357 | 7.61e-84 | 257 |
| MS.gene066454.t1 | MTR_6g084420 | 42.321 | 293 | 168 | 1 | 7 | 298 | 51 | 343 | 1.18e-82 | 253 |
| MS.gene066454.t1 | MTR_4g089170 | 42.321 | 293 | 168 | 1 | 4 | 295 | 33 | 325 | 8.12e-78 | 240 |
| MS.gene066454.t1 | MTR_7g007260 | 42.308 | 286 | 152 | 1 | 7 | 292 | 52 | 324 | 2.22e-75 | 234 |
| MS.gene066454.t1 | MTR_5g056550 | 42.014 | 288 | 133 | 2 | 7 | 293 | 104 | 358 | 5.04e-75 | 234 |
| MS.gene066454.t1 | MTR_7g007260 | 42.160 | 287 | 152 | 2 | 7 | 292 | 52 | 325 | 4.62e-74 | 231 |
| MS.gene066454.t1 | MTR_1g095110 | 38.776 | 294 | 171 | 6 | 7 | 295 | 28 | 317 | 2.47e-63 | 203 |
| MS.gene066454.t1 | MTR_4g127220 | 36.918 | 279 | 174 | 2 | 21 | 297 | 41 | 319 | 6.96e-58 | 189 |
| MS.gene066454.t1 | MTR_5g056550 | 44.056 | 143 | 79 | 1 | 7 | 148 | 104 | 246 | 6.00e-39 | 139 |
| MS.gene066454.t1 | MTR_5g056550 | 44.366 | 142 | 78 | 1 | 7 | 147 | 104 | 245 | 1.98e-38 | 137 |
| MS.gene066454.t1 | MTR_6g071475 | 31.071 | 280 | 182 | 6 | 16 | 293 | 120 | 390 | 1.23e-32 | 124 |
| MS.gene066454.t1 | MTR_3g109870 | 28.374 | 289 | 177 | 9 | 8 | 293 | 93 | 354 | 4.76e-24 | 100 |
| MS.gene066454.t1 | MTR_1g110680 | 42.553 | 94 | 50 | 2 | 200 | 293 | 15 | 104 | 1.45e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066454.t1 | AT2G39420 | 64.952 | 311 | 108 | 1 | 1 | 310 | 1 | 311 | 1.19e-159 | 448 |
| MS.gene066454.t1 | AT2G39410 | 61.415 | 311 | 119 | 1 | 1 | 310 | 1 | 311 | 2.78e-154 | 434 |
| MS.gene066454.t1 | AT2G39400 | 62.013 | 308 | 117 | 0 | 7 | 314 | 2 | 309 | 5.85e-150 | 423 |
| MS.gene066454.t1 | AT3G55180 | 60.984 | 305 | 118 | 1 | 7 | 310 | 2 | 306 | 1.38e-145 | 412 |
| MS.gene066454.t1 | AT3G55190 | 55.208 | 288 | 128 | 1 | 7 | 293 | 8 | 295 | 2.04e-122 | 354 |
| MS.gene066454.t1 | AT3G62860 | 52.431 | 288 | 136 | 1 | 7 | 294 | 6 | 292 | 1.25e-119 | 348 |
| MS.gene066454.t1 | AT2G47630 | 51.546 | 291 | 140 | 1 | 5 | 294 | 4 | 294 | 1.05e-118 | 345 |
| MS.gene066454.t1 | AT2G39400 | 62.667 | 225 | 83 | 1 | 7 | 231 | 2 | 225 | 1.26e-106 | 311 |
| MS.gene066454.t1 | AT3G62860 | 53.414 | 249 | 116 | 0 | 46 | 294 | 1 | 249 | 1.36e-102 | 303 |
| MS.gene066454.t1 | AT2G47630 | 51.807 | 249 | 120 | 0 | 46 | 294 | 1 | 249 | 6.86e-100 | 296 |
| MS.gene066454.t1 | AT2G47630 | 50.196 | 255 | 120 | 1 | 40 | 294 | 22 | 269 | 1.85e-97 | 291 |
| MS.gene066454.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.48e-91 | 276 |
| MS.gene066454.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 50 | 340 | 1.48e-91 | 276 |
| MS.gene066454.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 82 | 372 | 3.32e-91 | 276 |
| MS.gene066454.t1 | AT5G16120 | 45.361 | 291 | 159 | 0 | 4 | 294 | 68 | 358 | 3.57e-91 | 276 |
| MS.gene066454.t1 | AT1G11090 | 45.390 | 282 | 153 | 1 | 13 | 293 | 33 | 314 | 3.82e-83 | 254 |
| MS.gene066454.t1 | AT1G77420 | 42.361 | 288 | 165 | 1 | 7 | 293 | 91 | 378 | 3.66e-80 | 248 |
| MS.gene066454.t1 | AT5G14980 | 37.755 | 294 | 181 | 2 | 3 | 295 | 25 | 317 | 1.12e-70 | 222 |
| MS.gene066454.t1 | AT5G19290 | 34.364 | 291 | 188 | 3 | 7 | 295 | 29 | 318 | 3.15e-59 | 193 |
| MS.gene066454.t1 | AT1G52760 | 37.011 | 281 | 173 | 4 | 21 | 298 | 50 | 329 | 1.51e-57 | 189 |
| MS.gene066454.t1 | AT2G39410 | 61.165 | 103 | 39 | 1 | 1 | 102 | 1 | 103 | 1.31e-43 | 145 |
| MS.gene066454.t1 | AT1G73480 | 34.875 | 281 | 166 | 8 | 18 | 293 | 194 | 462 | 1.03e-40 | 147 |
| MS.gene066454.t1 | AT1G18360 | 32.302 | 291 | 177 | 10 | 11 | 293 | 103 | 381 | 1.21e-34 | 130 |
| MS.gene066454.t1 | AT5G11650 | 32.500 | 280 | 174 | 8 | 18 | 293 | 110 | 378 | 5.40e-34 | 128 |
Find 62 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTGGGACGGTGCTATTT+TGG | 0.211717 | 1.2:+85577352 | MS.gene066454:CDS |
| CACATGAAGATTAATGCTTT+TGG | 0.262833 | 1.2:-85576734 | None:intergenic |
| CTCATCTTCTTCTTATTCTC+TGG | 0.297099 | 1.2:-85577266 | None:intergenic |
| TACCACATATGCTGCTAAAA+TGG | 0.299979 | 1.2:-85577019 | None:intergenic |
| TGGTGAGCCACCTGAAAATT+TGG | 0.332385 | 1.2:+85581803 | MS.gene066454:CDS |
| AAGAAGATGAGGTATTTGTT+AGG | 0.361063 | 1.2:+85577278 | MS.gene066454:CDS |
| ATGCAACGTCAATGATATCT+TGG | 0.366862 | 1.2:-85581370 | None:intergenic |
| ATAGCACCGTCCCAATATTC+TGG | 0.371738 | 1.2:-85577347 | None:intergenic |
| TATACCTGTTGTCTGACTTC+GGG | 0.372481 | 1.2:-85581401 | None:intergenic |
| GAAGGACATGGAAAATCATA+TGG | 0.374514 | 1.2:+85576945 | MS.gene066454:CDS |
| GGTAAACCTCGTTTGAGAAC+AGG | 0.406676 | 1.2:+85581591 | MS.gene066454:CDS |
| ATACGCATCACAAATGCGTT+TGG | 0.426579 | 1.2:-85581299 | None:intergenic |
| AATAAACCATGCCACATTCC+AGG | 0.432223 | 1.2:-85581777 | None:intergenic |
| AATGGTGGATATGCAGTATA+CGG | 0.432907 | 1.2:+85576912 | MS.gene066454:CDS |
| GAACAGGTTATGAACTTAGC+AGG | 0.442798 | 1.2:+85581607 | MS.gene066454:CDS |
| TTCGTTTGCAGGAATCCAAC+TGG | 0.447472 | 1.2:-85576708 | None:intergenic |
| ATATACCTGTTGTCTGACTT+CGG | 0.460427 | 1.2:-85581402 | None:intergenic |
| ATGTGGCATGGTTTATTGTA+TGG | 0.464306 | 1.2:+85581783 | MS.gene066454:CDS |
| GTATTTGTTAGGAGAATCAA+TGG | 0.473307 | 1.2:+85577289 | MS.gene066454:CDS |
| CAGGGTTGCTACACAAATTG+AGG | 0.478781 | 1.2:+85581626 | MS.gene066454:CDS |
| CGTCAATGATATCTTGGGTT+GGG | 0.478954 | 1.2:-85581364 | None:intergenic |
| ATTAAATTACTTACTGTCCA+TGG | 0.494516 | 1.2:-85576786 | None:intergenic |
| TGTAATTGTTTGCTCACTGA+TGG | 0.495340 | 1.2:-85581714 | None:intergenic |
| CATGGTGATGCTGCATTCCA+TGG | 0.495721 | 1.2:-85576768 | None:intergenic |
| ATAGAGGAAAGATCTCAATA+TGG | 0.496875 | 1.2:+85581855 | MS.gene066454:CDS |
| GTTGGGACTATTTGCCATGT+GGG | 0.500420 | 1.2:-85581347 | None:intergenic |
| TTCACGAGGAATGAAGCTAT+TGG | 0.503313 | 1.2:+85576682 | MS.gene066454:CDS |
| GCAAATCAATACTGCTTCAA+AGG | 0.506460 | 1.2:+85581570 | MS.gene066454:CDS |
| AGTCCCCGAAGTCAGACAAC+AGG | 0.533737 | 1.2:+85581397 | MS.gene066454:CDS |
| GCATTAATCTTCATGTGTCA+TGG | 0.535158 | 1.2:+85576740 | MS.gene066454:CDS |
| CAGTGTCTTATCTTTGCTTG+AGG | 0.536029 | 1.2:-85581745 | None:intergenic |
| ATAAACCATGCCACATTCCA+GGG | 0.536826 | 1.2:-85581776 | None:intergenic |
| GGAAAATCATATGGGTTACC+TGG | 0.550368 | 1.2:+85576954 | MS.gene066454:CDS |
| TGAAGCTATTGGCAACCAGT+TGG | 0.556889 | 1.2:+85576693 | MS.gene066454:CDS |
| GAGCAAACAATTACATGAAG+TGG | 0.559648 | 1.2:+85581722 | MS.gene066454:CDS |
| CAGAGAATAAGAAGAAGATG+AGG | 0.560462 | 1.2:+85577267 | MS.gene066454:CDS |
| TTTGGCTGCACCAATGTGCA+AGG | 0.567302 | 1.2:+85577370 | MS.gene066454:CDS |
| TGCAACGTCAATGATATCTT+GGG | 0.571424 | 1.2:-85581369 | None:intergenic |
| GGTTGGGACTATTTGCCATG+TGG | 0.578579 | 1.2:-85581348 | None:intergenic |
| ACGTCAATGATATCTTGGGT+TGG | 0.580610 | 1.2:-85581365 | None:intergenic |
| TGAAATTATACCCTGGAATG+TGG | 0.585853 | 1.2:+85581766 | MS.gene066454:CDS |
| ACTGCAAGAAGACTAGCAAA+TGG | 0.585870 | 1.2:+85576894 | MS.gene066454:CDS |
| AGAATCAATGGGAGGAGCTG+TGG | 0.588110 | 1.2:+85577301 | MS.gene066454:CDS |
| TCAAAATTCTTAACAAGACC+AGG | 0.588245 | 1.2:-85576972 | None:intergenic |
| TTATACCCTGGAATGTGGCA+TGG | 0.590145 | 1.2:+85581771 | MS.gene066454:CDS |
| AACAGGTTATGAACTTAGCA+GGG | 0.592891 | 1.2:+85581608 | MS.gene066454:CDS |
| ATACCTGTTGTCTGACTTCG+GGG | 0.600788 | 1.2:-85581400 | None:intergenic |
| TATTTGTTAGGAGAATCAAT+GGG | 0.610159 | 1.2:+85577290 | MS.gene066454:CDS |
| AAGGACATGGAAAATCATAT+GGG | 0.610292 | 1.2:+85576946 | MS.gene066454:CDS |
| CACATATGCTGCTAAAATGG+CGG | 0.616640 | 1.2:-85577016 | None:intergenic |
| GCAAAGCTAACCTTGCACAT+TGG | 0.625763 | 1.2:-85577380 | None:intergenic |
| AACTGACATCAAATACGAAG+AGG | 0.626873 | 1.2:+85576483 | MS.gene066454:CDS |
| TCATAACCTGTTCTCAAACG+AGG | 0.632056 | 1.2:-85581597 | None:intergenic |
| TAAGCAAAGTTGCTCCCACA+TGG | 0.635188 | 1.2:+85581333 | MS.gene066454:CDS |
| GTATACGGTATAGATTATGA+AGG | 0.643716 | 1.2:+85576927 | MS.gene066454:CDS |
| GCAAGAAGACTAGCAAATGG+TGG | 0.646499 | 1.2:+85576897 | MS.gene066454:CDS |
| GGTATAGATTATGAAGGACA+TGG | 0.653183 | 1.2:+85576933 | MS.gene066454:CDS |
| CATGGAATGCAGCATCACCA+TGG | 0.662101 | 1.2:+85576769 | MS.gene066454:CDS |
| TTGTTAGGAGAATCAATGGG+AGG | 0.667244 | 1.2:+85577293 | MS.gene066454:CDS |
| CATGTGTCATGGATATGCCA+TGG | 0.671110 | 1.2:+85576751 | MS.gene066454:CDS |
| AAGACACTGAAATTATACCC+TGG | 0.682010 | 1.2:+85581759 | MS.gene066454:CDS |
| GATTTCGTATTGAATTCACG+AGG | 0.718373 | 1.2:+85576668 | MS.gene066454:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTATCTTATTATAAATA+TGG | + | chr1.2:85579362-85579381 | MS.gene066454:intron | 10.0% |
| !! | AATTGAATGAATTATTATAT+AGG | + | chr1.2:85576870-85576889 | MS.gene066454:intron | 10.0% |
| !! | ATTATTAGATAATAATGTTT+GGG | - | chr1.2:85577641-85577660 | None:intergenic | 10.0% |
| !! | CTAAAAGTTTATATATAAAT+GGG | - | chr1.2:85580377-85580396 | None:intergenic | 10.0% |
| !! | CTTAAAAGAAATTATTAAAT+AGG | + | chr1.2:85578917-85578936 | MS.gene066454:intron | 10.0% |
| !! | TAATGATATAAAATTATTTG+TGG | - | chr1.2:85578945-85578964 | None:intergenic | 10.0% |
| !! | TTGAATGAAATTAATTTATA+GGG | - | chr1.2:85578318-85578337 | None:intergenic | 10.0% |
| !!! | AAAAAACTTTTTCATTAAAT+TGG | - | chr1.2:85580433-85580452 | None:intergenic | 10.0% |
| !!! | CAATTATTTTTATTCAAAAA+AGG | + | chr1.2:85579242-85579261 | MS.gene066454:intron | 10.0% |
| !!! | CTATTTAATAATTTCTTTTA+AGG | - | chr1.2:85578919-85578938 | None:intergenic | 10.0% |
| !! | AAGAATATCTAAGAAATAAT+AGG | + | chr1.2:85579497-85579516 | MS.gene066454:intron | 15.0% |
| !! | AATAAATGAACAGTAAAATA+CGG | - | chr1.2:85579636-85579655 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1.2:85578244-85578263 | MS.gene066454:intron | 15.0% |
| !! | ACTATCAATACATATAAATT+AGG | + | chr1.2:85577801-85577820 | MS.gene066454:intron | 15.0% |
| !! | AGAATATCTAAGAAATAATA+GGG | + | chr1.2:85579498-85579517 | MS.gene066454:intron | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr1.2:85578052-85578071 | MS.gene066454:intron | 15.0% |
| !! | CCTAAAAGTTTATATATAAA+TGG | - | chr1.2:85580378-85580397 | None:intergenic | 15.0% |
| !! | CTATCAATACATATAAATTA+GGG | + | chr1.2:85577802-85577821 | MS.gene066454:intron | 15.0% |
| !! | GACATGATTATTAATTTATT+AGG | + | chr1.2:85576618-85576637 | MS.gene066454:intron | 15.0% |
| !! | GATTATTAGATAATAATGTT+TGG | - | chr1.2:85577642-85577661 | None:intergenic | 15.0% |
| !! | GTTATAGATTTATATATTGA+AGG | + | chr1.2:85581521-85581540 | MS.gene066454:intron | 15.0% |
| !! | GTTGAATGAAATTAATTTAT+AGG | - | chr1.2:85578319-85578338 | None:intergenic | 15.0% |
| !! | TTTAATGAATAATTTATGCA+TGG | + | chr1.2:85581123-85581142 | MS.gene066454:intron | 15.0% |
| !! | TTTATCTTAATCAAAAGAAA+CGG | + | chr1.2:85576586-85576605 | MS.gene066454:intron | 15.0% |
| !!! | ATCAATTGTTTCTTATAATA+AGG | + | chr1.2:85579419-85579438 | MS.gene066454:intron | 15.0% |
| !!! | CCATTTATATATAAACTTTT+AGG | + | chr1.2:85580375-85580394 | MS.gene066454:intron | 15.0% |
| !!! | TCTTTTATTATATGATATCA+TGG | + | chr1.2:85576822-85576841 | MS.gene066454:intron | 15.0% |
| !!! | TTCTGTTTTTTATTTTATTC+AGG | + | chr1.2:85576646-85576665 | MS.gene066454:intron | 15.0% |
| !! | AAAAAAGGAACAAATACAAA+GGG | + | chr1.2:85579257-85579276 | MS.gene066454:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr1.2:85578182-85578201 | MS.gene066454:intron | 20.0% |
| !! | AAATAAATAAGCTATGTCAT+GGG | - | chr1.2:85577143-85577162 | None:intergenic | 20.0% |
| !! | AACATTAGGAAAACTAATTA+CGG | - | chr1.2:85576424-85576443 | None:intergenic | 20.0% |
| !! | ACATGTTACATGTTTATTAT+AGG | + | chr1.2:85576561-85576580 | MS.gene066454:intron | 20.0% |
| !! | AGATTATAATCTAATGTCTA+TGG | - | chr1.2:85577687-85577706 | None:intergenic | 20.0% |
| !! | AGCAATATAATTCAATTCAA+TGG | + | chr1.2:85580652-85580671 | MS.gene066454:intron | 20.0% |
| !! | ATCTTTATGTTTAATTGTGA+TGG | - | chr1.2:85578359-85578378 | None:intergenic | 20.0% |
| !! | ATGGTGTTTATTAAGTATTA+CGG | - | chr1.2:85578880-85578899 | None:intergenic | 20.0% |
| !! | CATTTCATCTATTAAATCAA+GGG | - | chr1.2:85578746-85578765 | None:intergenic | 20.0% |
| !! | GATTATTAATTTATTAGGCA+TGG | + | chr1.2:85576623-85576642 | MS.gene066454:intron | 20.0% |
| !! | GCATAAAAAGTTGAATTTAA+TGG | - | chr1.2:85577089-85577108 | None:intergenic | 20.0% |
| !! | GGAAAAAAATAACAAACATT+AGG | - | chr1.2:85576438-85576457 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr1.2:85578181-85578200 | MS.gene066454:intron | 20.0% |
| !! | TATTTAACACCACATTAAAT+AGG | - | chr1.2:85579100-85579119 | None:intergenic | 20.0% |
| !! | TATTTATGAATTGCAGATTA+GGG | + | chr1.2:85581548-85581567 | MS.gene066454:intron | 20.0% |
| !! | TTATGTTTAATACAGTTGTT+TGG | + | chr1.2:85581070-85581089 | MS.gene066454:intron | 20.0% |
| !! | TTATTCTACAAAAAAGATGT+TGG | - | chr1.2:85576526-85576545 | None:intergenic | 20.0% |
| !! | TTATTTATGAATTGCAGATT+AGG | + | chr1.2:85581547-85581566 | MS.gene066454:intron | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1.2:85578087-85578106 | MS.gene066454:intron | 20.0% |
| !!! | AGTAGAAGATTAGTATTTTA+TGG | - | chr1.2:85580706-85580725 | None:intergenic | 20.0% |
| !!! | ATAATTTCTTTTAAGGTGTT+TGG | - | chr1.2:85578912-85578931 | None:intergenic | 20.0% |
| !!! | ATTCTTTTACATTGATTGAT+AGG | - | chr1.2:85579483-85579502 | None:intergenic | 20.0% |
| !!! | CACTATTAATACTTTTTTTG+AGG | - | chr1.2:85581481-85581500 | None:intergenic | 20.0% |
| !!! | CATATTTAAATTTTGACGTA+AGG | - | chr1.2:85580589-85580608 | None:intergenic | 20.0% |
| !!! | GTAGAAGATTAGTATTTTAT+GGG | - | chr1.2:85580705-85580724 | None:intergenic | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | - | chr1.2:85579320-85579339 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr1.2:85579325-85579344 | MS.gene066454:intron | 20.0% |
| !!! | TATTCAAAGACATTTTCAAT+TGG | + | chr1.2:85581832-85581851 | MS.gene066454:CDS | 20.0% |
| !!! | TATTTAATGTGGTGTTAAAT+AGG | + | chr1.2:85579099-85579118 | MS.gene066454:intron | 20.0% |
| !!! | TCATAGATTGTTTTTTATAG+TGG | - | chr1.2:85578682-85578701 | None:intergenic | 20.0% |
| !!! | TCTTGTTATATACTTGAATA+TGG | + | chr1.2:85578421-85578440 | MS.gene066454:intron | 20.0% |
| !!! | TGTATTTTGAGAGTAATAAT+GGG | - | chr1.2:85581011-85581030 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTGAGAAATGATA+AGG | - | chr1.2:85580315-85580334 | None:intergenic | 20.0% |
| ! | AAATTCCAACTAAATATGAG+GGG | - | chr1.2:85580217-85580236 | None:intergenic | 25.0% |
| ! | AAGTAAGGACTAAATTTACA+AGG | - | chr1.2:85577861-85577880 | None:intergenic | 25.0% |
| ! | AATAAATAAGCTATGTCATG+GGG | - | chr1.2:85577142-85577161 | None:intergenic | 25.0% |
| ! | AATTGGAAATCAATTAGACT+AGG | - | chr1.2:85580416-85580435 | None:intergenic | 25.0% |
| ! | AGATTACTATGCACTTTATA+TGG | - | chr1.2:85580485-85580504 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1.2:85578215-85578234 | MS.gene066454:intron | 25.0% |
| ! | ATAGCTTATTTATTTGTCCT+TGG | + | chr1.2:85577148-85577167 | MS.gene066454:intron | 25.0% |
| ! | ATTAAATTACTTACTGTCCA+TGG | - | chr1.2:85576789-85576808 | None:intergenic | 25.0% |
| ! | CAAAAAAGGAACAAATACAA+AGG | + | chr1.2:85579256-85579275 | MS.gene066454:intron | 25.0% |
| ! | CAAATAAATAAGCTATGTCA+TGG | - | chr1.2:85577144-85577163 | None:intergenic | 25.0% |
| ! | CAAGAAGCTACAAAATATAA+CGG | - | chr1.2:85578514-85578533 | None:intergenic | 25.0% |
| ! | CCATTTCATCTATTAAATCA+AGG | - | chr1.2:85578747-85578766 | None:intergenic | 25.0% |
| ! | CCTTGATTTAATAGATGAAA+TGG | + | chr1.2:85578744-85578763 | MS.gene066454:intron | 25.0% |
| ! | GAAAGAATAGTATGTATGTA+TGG | - | chr1.2:85577493-85577512 | None:intergenic | 25.0% |
| ! | GAAATTCCAACTAAATATGA+GGG | - | chr1.2:85580218-85580237 | None:intergenic | 25.0% |
| ! | GACTTTGAGCTAAAAAAAAA+AGG | + | chr1.2:85578768-85578787 | MS.gene066454:intron | 25.0% |
| ! | GTAATTTCCTTCAAAAACAA+TGG | - | chr1.2:85580248-85580267 | None:intergenic | 25.0% |
| ! | GTTATATACTTGAATATGGA+GGG | + | chr1.2:85578425-85578444 | MS.gene066454:intron | 25.0% |
| ! | TCACCATGTAAAATCAAAAA+AGG | - | chr1.2:85581675-85581694 | None:intergenic | 25.0% |
| ! | TGAAATATGTATAGCATGTT+TGG | - | chr1.2:85578590-85578609 | None:intergenic | 25.0% |
| ! | TGAAATTCCAACTAAATATG+AGG | - | chr1.2:85580219-85580238 | None:intergenic | 25.0% |
| ! | TGAGAAAAGGGAAAAAAATA+TGG | - | chr1.2:85579659-85579678 | None:intergenic | 25.0% |
| ! | TGTACAATCTGTTTCATTTA+TGG | - | chr1.2:85580020-85580039 | None:intergenic | 25.0% |
| ! | TGTTATATACTTGAATATGG+AGG | + | chr1.2:85578424-85578443 | MS.gene066454:intron | 25.0% |
| ! | TTATATACTTGAATATGGAG+GGG | + | chr1.2:85578426-85578445 | MS.gene066454:intron | 25.0% |
| ! | TTGGCTAAATAAGATATGAA+TGG | + | chr1.2:85577167-85577186 | MS.gene066454:intron | 25.0% |
| !! | AATACAATCTCCAAATTTTC+AGG | - | chr1.2:85581816-85581835 | None:intergenic | 25.0% |
| !! | ATTAATAAGTCACTTTCTGA+AGG | - | chr1.2:85580811-85580830 | None:intergenic | 25.0% |
| !! | ATTCATATCTTATTTAGCCA+AGG | - | chr1.2:85577168-85577187 | None:intergenic | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | - | chr1.2:85579315-85579334 | None:intergenic | 25.0% |
| !! | TATTTGTTAGGAGAATCAAT+GGG | + | chr1.2:85577290-85577309 | MS.gene066454:CDS | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | + | chr1.2:85579424-85579443 | MS.gene066454:intron | 25.0% |
| !!! | AAATATGCCATTGTTTTTGA+AGG | + | chr1.2:85580238-85580257 | MS.gene066454:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr1.2:85577892-85577911 | None:intergenic | 25.0% |
| !!! | CTTCCTTTTTTGATTTTACA+TGG | + | chr1.2:85581669-85581688 | MS.gene066454:CDS | 25.0% |
| !!! | GTGTATTTTGAGAGTAATAA+TGG | - | chr1.2:85581012-85581031 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr1.2:85577893-85577912 | None:intergenic | 25.0% |
| !!! | TCAATTAGACTAGGTTTTAT+AGG | - | chr1.2:85580407-85580426 | None:intergenic | 25.0% |
| !!! | TTTCCTTAATTTTGTTTTGC+AGG | + | chr1.2:85576453-85576472 | MS.gene066454:intron | 25.0% |
| !!! | TTTTTTGATTTTACATGGTG+AGG | + | chr1.2:85581674-85581693 | MS.gene066454:CDS | 25.0% |
| AAATACCCCTCATATTTAGT+TGG | + | chr1.2:85580209-85580228 | MS.gene066454:intron | 30.0% | |
| AAGAGAGATTAACAGAAAAG+AGG | - | chr1.2:85579731-85579750 | None:intergenic | 30.0% | |
| AAGAGGAAAACATTGTTTGT+TGG | - | chr1.2:85579714-85579733 | None:intergenic | 30.0% | |
| AAGGACATGGAAAATCATAT+GGG | + | chr1.2:85576946-85576965 | MS.gene066454:CDS | 30.0% | |
| ACAATTGAACACCCTAAATT+GGG | + | chr1.2:85578815-85578834 | MS.gene066454:intron | 30.0% | |
| ATAGAGGAAAGATCTCAATA+TGG | + | chr1.2:85581855-85581874 | MS.gene066454:CDS | 30.0% | |
| ATCAAAGTAAACTCACGTTT+AGG | + | chr1.2:85578485-85578504 | MS.gene066454:intron | 30.0% | |
| ATGTATTATACTCCACAGAA+TGG | + | chr1.2:85579070-85579089 | MS.gene066454:intron | 30.0% | |
| ATTCTGTGGAGTATAATACA+TGG | - | chr1.2:85579071-85579090 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr1.2:85577955-85577974 | MS.gene066454:intron | 30.0% | |
| CAATTTAAGCACCCAATTTA+GGG | - | chr1.2:85578829-85578848 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr1.2:85578214-85578233 | MS.gene066454:intron | 30.0% | |
| CCTGTTCGAATATAATCATA+CGG | + | chr1.2:85580678-85580697 | MS.gene066454:intron | 30.0% | |
| GCAATTTGAATAAAGTCACA+CGG | + | chr1.2:85580847-85580866 | MS.gene066454:intron | 30.0% | |
| GCACATTATAGTATATGATG+TGG | - | chr1.2:85577469-85577488 | None:intergenic | 30.0% | |
| GCTTATTACTGTATATGTGA+TGG | - | chr1.2:85577594-85577613 | None:intergenic | 30.0% | |
| GTATACGGTATAGATTATGA+AGG | + | chr1.2:85576927-85576946 | MS.gene066454:CDS | 30.0% | |
| TAAAAAAAAAAGGAGAGACG+TGG | + | chr1.2:85578778-85578797 | MS.gene066454:intron | 30.0% | |
| TAAACTCAGTCGTAAAAAGA+AGG | - | chr1.2:85581107-85581126 | None:intergenic | 30.0% | |
| TCAAAATTCTTAACAAGACC+AGG | - | chr1.2:85576975-85576994 | None:intergenic | 30.0% | |
| TCAATTTAAGCACCCAATTT+AGG | - | chr1.2:85578830-85578849 | None:intergenic | 30.0% | |
| TCATTTACATGATCTTGTCA+CGG | + | chr1.2:85578610-85578629 | MS.gene066454:intron | 30.0% | |
| TGTATTATACTCCACAGAAT+GGG | + | chr1.2:85579071-85579090 | MS.gene066454:intron | 30.0% | |
| TTCTGTGGAGTATAATACAT+GGG | - | chr1.2:85579070-85579089 | None:intergenic | 30.0% | |
| ! | AAGAAGATGAGGTATTTGTT+AGG | + | chr1.2:85577278-85577297 | MS.gene066454:CDS | 30.0% |
| ! | AGACATTTTCAATTGGATAG+AGG | + | chr1.2:85581839-85581858 | MS.gene066454:CDS | 30.0% |
| ! | CACATGAAGATTAATGCTTT+TGG | - | chr1.2:85576737-85576756 | None:intergenic | 30.0% |
| ! | CTTCTACTATGATAATGAGA+AGG | + | chr1.2:85580718-85580737 | MS.gene066454:intron | 30.0% |
| ! | GTATTTGTTAGGAGAATCAA+TGG | + | chr1.2:85577289-85577308 | MS.gene066454:CDS | 30.0% |
| ! | TTGTTGATGTACTTGCTAAA+CGG | + | chr1.2:85581041-85581060 | MS.gene066454:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr1.2:85577845-85577864 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1.2:85577846-85577865 | None:intergenic | 30.0% |
| AAAAAGCCAGAATATTGGGA+CGG | + | chr1.2:85577341-85577360 | MS.gene066454:CDS | 35.0% | |
| AACAGGTTATGAACTTAGCA+GGG | + | chr1.2:85581608-85581627 | MS.gene066454:CDS | 35.0% | |
| AACTGACATCAAATACGAAG+AGG | + | chr1.2:85576483-85576502 | MS.gene066454:CDS | 35.0% | |
| AAGAAAGAAACGTGCAAACA+CGG | - | chr1.2:85577541-85577560 | None:intergenic | 35.0% | |
| AAGACACTGAAATTATACCC+TGG | + | chr1.2:85581759-85581778 | MS.gene066454:CDS | 35.0% | |
| AAGTAAGGACTAAACTCACA+AGG | + | chr1.2:85578259-85578278 | MS.gene066454:intron | 35.0% | |
| ACGTGATATTGAGATAACGA+AGG | - | chr1.2:85580770-85580789 | None:intergenic | 35.0% | |
| AGCAGGGACTAAAATAAGTA+AGG | - | chr1.2:85577876-85577895 | None:intergenic | 35.0% | |
| ATATACAGTGATGTCGTGAT+CGG | - | chr1.2:85579873-85579892 | None:intergenic | 35.0% | |
| ATATACCTGTTGTCTGACTT+CGG | - | chr1.2:85581405-85581424 | None:intergenic | 35.0% | |
| ATGCAAAATGAAGACAGAGA+GGG | + | chr1.2:85579014-85579033 | MS.gene066454:intron | 35.0% | |
| ATGCAACGTCAATGATATCT+TGG | - | chr1.2:85581373-85581392 | None:intergenic | 35.0% | |
| ATGTGGCATGGTTTATTGTA+TGG | + | chr1.2:85581783-85581802 | MS.gene066454:CDS | 35.0% | |
| CAACACAAATACGACATCAA+GGG | - | chr1.2:85580278-85580297 | None:intergenic | 35.0% | |
| CACAATTGAACACCCTAAAT+TGG | + | chr1.2:85578814-85578833 | MS.gene066454:intron | 35.0% | |
| CAGACACACATGTGAAATAT+GGG | - | chr1.2:85579538-85579557 | None:intergenic | 35.0% | |
| CAGAGAATAAGAAGAAGATG+AGG | + | chr1.2:85577267-85577286 | MS.gene066454:CDS | 35.0% | |
| CCGTATGATTATATTCGAAC+AGG | - | chr1.2:85580681-85580700 | None:intergenic | 35.0% | |
| CTCATCTTCTTCTTATTCTC+TGG | - | chr1.2:85577269-85577288 | None:intergenic | 35.0% | |
| GAAGGACATGGAAAATCATA+TGG | + | chr1.2:85576945-85576964 | MS.gene066454:CDS | 35.0% | |
| GAGCAAACAATTACATGAAG+TGG | + | chr1.2:85581722-85581741 | MS.gene066454:CDS | 35.0% | |
| GATTTCGTATTGAATTCACG+AGG | + | chr1.2:85576668-85576687 | MS.gene066454:CDS | 35.0% | |
| GCAAATCAATACTGCTTCAA+AGG | + | chr1.2:85581570-85581589 | MS.gene066454:CDS | 35.0% | |
| GCATTAATCTTCATGTGTCA+TGG | + | chr1.2:85576740-85576759 | MS.gene066454:CDS | 35.0% | |
| GGTATAGATTATGAAGGACA+TGG | + | chr1.2:85576933-85576952 | MS.gene066454:CDS | 35.0% | |
| GTATTATACTCCACAGAATG+GGG | + | chr1.2:85579072-85579091 | MS.gene066454:intron | 35.0% | |
| TACCACATATGCTGCTAAAA+TGG | - | chr1.2:85577022-85577041 | None:intergenic | 35.0% | |
| TCAGACACACATGTGAAATA+TGG | - | chr1.2:85579539-85579558 | None:intergenic | 35.0% | |
| TCGCCTGCAAAACAAAATTA+AGG | - | chr1.2:85576459-85576478 | None:intergenic | 35.0% | |
| TGAAATTATACCCTGGAATG+TGG | + | chr1.2:85581766-85581785 | MS.gene066454:CDS | 35.0% | |
| TGCAACGTCAATGATATCTT+GGG | - | chr1.2:85581372-85581391 | None:intergenic | 35.0% | |
| TGTAATTGTTTGCTCACTGA+TGG | - | chr1.2:85581717-85581736 | None:intergenic | 35.0% | |
| TTAAATCAAGGGCTGAGATT+TGG | - | chr1.2:85578735-85578754 | None:intergenic | 35.0% | |
| TTACGGTAAAATGAGTGATG+TGG | - | chr1.2:85578863-85578882 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr1.2:85579428-85579447 | MS.gene066454:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr1.2:85579447-85579428 | None:intergenic | 35.0% | |
| TTCTTATTGAATACTCCCTC+CGG | - | chr1.2:85579446-85579465 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr1.2:85579427-85579446 | MS.gene066454:intron | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr1.2:85579446-85579427 | None:intergenic | 35.0% | |
| ! | CAATTTAGGGTGTTCAATTG+TGG | - | chr1.2:85578816-85578835 | None:intergenic | 35.0% |
| ! | TATCCTCACATTTTCTTCTC+AGG | - | chr1.2:85579171-85579190 | None:intergenic | 35.0% |
| ! | TCTCTGTCTTCATTTTGCAT+GGG | - | chr1.2:85579014-85579033 | None:intergenic | 35.0% |
| !! | AATGGTGGATATGCAGTATA+CGG | + | chr1.2:85576912-85576931 | MS.gene066454:CDS | 35.0% |
| !! | ACAATCTCCAAATTTTCAGG+TGG | - | chr1.2:85581813-85581832 | None:intergenic | 35.0% |
| !! | ATATCGACTTCTGACCTATT+GGG | + | chr1.2:85579889-85579908 | MS.gene066454:intron | 35.0% |
| !! | CACAAGGTCGCTATTTTATA+GGG | + | chr1.2:85578275-85578294 | MS.gene066454:intron | 35.0% |
| !! | TATATCGACTTCTGACCTAT+TGG | + | chr1.2:85579888-85579907 | MS.gene066454:intron | 35.0% |
| !! | TCACAAGGTCGCTATTTTAT+AGG | + | chr1.2:85578274-85578293 | MS.gene066454:intron | 35.0% |
| !!! | TTTGCGATAATTTTTTGCGG+AGG | + | chr1.2:85578090-85578109 | MS.gene066454:intron | 35.0% |
| AAACGAGATCTGAATAGCAG+CGG | + | chr1.2:85579959-85579978 | MS.gene066454:intron | 40.0% | |
| AATAAACCATGCCACATTCC+AGG | - | chr1.2:85581780-85581799 | None:intergenic | 40.0% | |
| ACCGGAAAAAGCCAGAATAT+TGG | + | chr1.2:85577336-85577355 | MS.gene066454:CDS | 40.0% | |
| ACGTCAATGATATCTTGGGT+TGG | - | chr1.2:85581368-85581387 | None:intergenic | 40.0% | |
| ACTGCAAGAAGACTAGCAAA+TGG | + | chr1.2:85576894-85576913 | MS.gene066454:CDS | 40.0% | |
| AGGTGTTTGGTTGCAGAAAA+TGG | - | chr1.2:85578899-85578918 | None:intergenic | 40.0% | |
| AGTACAGCGCACATCAAATT+TGG | + | chr1.2:85577614-85577633 | MS.gene066454:intron | 40.0% | |
| ATAAACCATGCCACATTCCA+GGG | - | chr1.2:85581779-85581798 | None:intergenic | 40.0% | |
| ATACGCATCACAAATGCGTT+TGG | - | chr1.2:85581302-85581321 | None:intergenic | 40.0% | |
| ATATGATCATGCACTCCACT+AGG | + | chr1.2:85579188-85579207 | MS.gene066454:intron | 40.0% | |
| CACATATGCTGCTAAAATGG+CGG | - | chr1.2:85577019-85577038 | None:intergenic | 40.0% | |
| CAGTGTCTTATCTTTGCTTG+AGG | - | chr1.2:85581748-85581767 | None:intergenic | 40.0% | |
| CATCCTGAGAAGAAAATGTG+AGG | + | chr1.2:85579165-85579184 | MS.gene066454:intron | 40.0% | |
| CATGCAAAATGAAGACAGAG+AGG | + | chr1.2:85579013-85579032 | MS.gene066454:intron | 40.0% | |
| CCAACACAAATACGACATCA+AGG | - | chr1.2:85580279-85580298 | None:intergenic | 40.0% | |
| CCGGAAAAAGCCAGAATATT+GGG | + | chr1.2:85577337-85577356 | MS.gene066454:CDS | 40.0% | |
| CCTTGATGTCGTATTTGTGT+TGG | + | chr1.2:85580276-85580295 | MS.gene066454:intron | 40.0% | |
| CGTCAATGATATCTTGGGTT+GGG | - | chr1.2:85581367-85581386 | None:intergenic | 40.0% | |
| GAACAGGTTATGAACTTAGC+AGG | + | chr1.2:85581607-85581626 | MS.gene066454:CDS | 40.0% | |
| GATGGAACAACAAACATGTG+TGG | - | chr1.2:85577576-85577595 | None:intergenic | 40.0% | |
| GTATAATACATGGGTGGCTA+TGG | - | chr1.2:85579061-85579080 | None:intergenic | 40.0% | |
| TATACCTGTTGTCTGACTTC+GGG | - | chr1.2:85581404-85581423 | None:intergenic | 40.0% | |
| TATGATCATGCACTCCACTA+GGG | + | chr1.2:85579189-85579208 | MS.gene066454:intron | 40.0% | |
| TCATAACCTGTTCTCAAACG+AGG | - | chr1.2:85581600-85581619 | None:intergenic | 40.0% | |
| TGTCTGAGAATTGAGATGAG+AGG | + | chr1.2:85579552-85579571 | MS.gene066454:intron | 40.0% | |
| TGTGGAGTATAATACATGGG+TGG | - | chr1.2:85579067-85579086 | None:intergenic | 40.0% | |
| TTCACGAGGAATGAAGCTAT+TGG | + | chr1.2:85576682-85576701 | MS.gene066454:CDS | 40.0% | |
| TTGTTAGGAGAATCAATGGG+AGG | + | chr1.2:85577293-85577312 | MS.gene066454:CDS | 40.0% | |
| ! | AATGGGGTGCCTATTTAATG+TGG | + | chr1.2:85579088-85579107 | MS.gene066454:intron | 40.0% |
| ! | ATGTGCTACTGTGTGAGAAA+AGG | - | chr1.2:85579672-85579691 | None:intergenic | 40.0% |
| ! | CTCTCTGTCTTCATTTTGCA+TGG | - | chr1.2:85579015-85579034 | None:intergenic | 40.0% |
| ! | GATTTGGAGTCTCATGTGAT+AGG | - | chr1.2:85578719-85578738 | None:intergenic | 40.0% |
| ! | GCTTTTGGATTTTCGTTTGC+AGG | - | chr1.2:85576722-85576741 | None:intergenic | 40.0% |
| ! | GGAAAATCATATGGGTTACC+TGG | + | chr1.2:85576954-85576973 | MS.gene066454:CDS | 40.0% |
| ! | TGTGCTACTGTGTGAGAAAA+GGG | - | chr1.2:85579671-85579690 | None:intergenic | 40.0% |
| ! | TTAGGGTGTTCAATTGTGGA+TGG | - | chr1.2:85578812-85578831 | None:intergenic | 40.0% |
| !!! | ATATTGGGACGGTGCTATTT+TGG | + | chr1.2:85577352-85577371 | MS.gene066454:CDS | 40.0% |
| !!! | CCCAATATTCTGGCTTTTTC+CGG | - | chr1.2:85577340-85577359 | None:intergenic | 40.0% |
| AAGGCACAATGAGAGAGAGT+AGG | - | chr1.2:85579834-85579853 | None:intergenic | 45.0% | |
| ACTCTATGCCCAAAAGTCAG+AGG | - | chr1.2:85580744-85580763 | None:intergenic | 45.0% | |
| AGTGTGATACATACTCCCTC+CGG | + | chr1.2:85579293-85579312 | MS.gene066454:intron | 45.0% | |
| ATACCTGTTGTCTGACTTCG+GGG | - | chr1.2:85581403-85581422 | None:intergenic | 45.0% | |
| ATAGCACCGTCCCAATATTC+TGG | - | chr1.2:85577350-85577369 | None:intergenic | 45.0% | |
| CAACTCTCTCTTTCTCTCAC+CGG | + | chr1.2:85579755-85579774 | MS.gene066454:intron | 45.0% | |
| CACCATTGTGGATGGTGTAA+GGG | + | chr1.2:85579131-85579150 | MS.gene066454:intron | 45.0% | |
| CAGGGTTGCTACACAAATTG+AGG | + | chr1.2:85581626-85581645 | MS.gene066454:CDS | 45.0% | |
| CATGTGTCATGGATATGCCA+TGG | + | chr1.2:85576751-85576770 | MS.gene066454:CDS | 45.0% | |
| CGGTGAGAGCTAATGTTCAA+AGG | - | chr1.2:85579853-85579872 | None:intergenic | 45.0% | |
| CTTACACCATCCACAATGGT+GGG | - | chr1.2:85579132-85579151 | None:intergenic | 45.0% | |
| CTTCTCACCACTGTCATCAT+CGG | - | chr1.2:85580043-85580062 | None:intergenic | 45.0% | |
| CTTCTGACCTATTGGGTTTC+AGG | + | chr1.2:85579896-85579915 | MS.gene066454:intron | 45.0% | |
| GATGATGACAGTGGTGAGAA+GGG | + | chr1.2:85580042-85580061 | MS.gene066454:intron | 45.0% | |
| GCAAAGCTAACCTTGCACAT+TGG | - | chr1.2:85577383-85577402 | None:intergenic | 45.0% | |
| GCAAGAAGACTAGCAAATGG+TGG | + | chr1.2:85576897-85576916 | MS.gene066454:CDS | 45.0% | |
| GGGTGTGAGAGATATACATG+AGG | + | chr1.2:85579209-85579228 | MS.gene066454:intron | 45.0% | |
| GGTAAACCTCGTTTGAGAAC+AGG | + | chr1.2:85581591-85581610 | MS.gene066454:CDS | 45.0% | |
| GTATATCTCTCACACCCTAG+TGG | - | chr1.2:85579206-85579225 | None:intergenic | 45.0% | |
| GTTGGGACTATTTGCCATGT+GGG | - | chr1.2:85581350-85581369 | None:intergenic | 45.0% | |
| TAAATAGGCACCCCATTCTG+TGG | - | chr1.2:85579085-85579104 | None:intergenic | 45.0% | |
| TAAGCAAAGTTGCTCCCACA+TGG | + | chr1.2:85581333-85581352 | MS.gene066454:CDS | 45.0% | |
| TACCCTTACACCATCCACAA+TGG | - | chr1.2:85579136-85579155 | None:intergenic | 45.0% | |
| TGAAGCTATTGGCAACCAGT+TGG | + | chr1.2:85576693-85576712 | MS.gene066454:CDS | 45.0% | |
| TGAGAGAAAGAGAGAGTTGC+AGG | - | chr1.2:85579754-85579773 | None:intergenic | 45.0% | |
| TGGTGAGCCACCTGAAAATT+TGG | + | chr1.2:85581803-85581822 | MS.gene066454:CDS | 45.0% | |
| TTATACCCTGGAATGTGGCA+TGG | + | chr1.2:85581771-85581790 | MS.gene066454:CDS | 45.0% | |
| TTCGTTTGCAGGAATCCAAC+TGG | - | chr1.2:85576711-85576730 | None:intergenic | 45.0% | |
| TTGTACACCGATGATGACAG+TGG | + | chr1.2:85580033-85580052 | MS.gene066454:intron | 45.0% | |
| ! | ATGAGAAGGCCTCTGACTTT+TGG | + | chr1.2:85580732-85580751 | MS.gene066454:intron | 45.0% |
| ! | TGAGAAGGCCTCTGACTTTT+GGG | + | chr1.2:85580733-85580752 | MS.gene066454:intron | 45.0% |
| !! | CGCCATTTTAGCAGCATATG+TGG | + | chr1.2:85577017-85577036 | MS.gene066454:CDS | 45.0% |
| !! | TTTATTAAGATTTATTAAAT+GGG | + | chr1.2:85578987-85579006 | MS.gene066454:intron | 5.0% |
| !!! | TTTTATTAAGATTTATTAAA+TGG | + | chr1.2:85578986-85579005 | MS.gene066454:intron | 5.0% |
| ACATGGGTGGCTATGGAGAA+GGG | - | chr1.2:85579054-85579073 | None:intergenic | 50.0% | |
| ACCTATTGGGTTTCAGGAGG+CGG | + | chr1.2:85579902-85579921 | MS.gene066454:intron | 50.0% | |
| AGAATCAATGGGAGGAGCTG+TGG | + | chr1.2:85577301-85577320 | MS.gene066454:CDS | 50.0% | |
| ATCTGAATAGCAGCGGTCGA+CGG | + | chr1.2:85579966-85579985 | MS.gene066454:intron | 50.0% | |
| CAGAGGAGAACGATGGTTGT+CGG | + | chr1.2:85579931-85579950 | MS.gene066454:intron | 50.0% | |
| CATGGAATGCAGCATCACCA+TGG | + | chr1.2:85576769-85576788 | MS.gene066454:CDS | 50.0% | |
| CCACCATTGTGGATGGTGTA+AGG | + | chr1.2:85579130-85579149 | MS.gene066454:intron | 50.0% | |
| CCTTACACCATCCACAATGG+TGG | - | chr1.2:85579133-85579152 | None:intergenic | 50.0% | |
| CGATGATGACAGTGGTGAGA+AGG | + | chr1.2:85580041-85580060 | MS.gene066454:intron | 50.0% | |
| CTGACCTATTGGGTTTCAGG+AGG | + | chr1.2:85579899-85579918 | MS.gene066454:intron | 50.0% | |
| GCTATGGAGAAGGGTGACTA+TGG | - | chr1.2:85579045-85579064 | None:intergenic | 50.0% | |
| GGTTGGGACTATTTGCCATG+TGG | - | chr1.2:85581351-85581370 | None:intergenic | 50.0% | |
| GTCGACGACATAACAGTTGC+CGG | - | chr1.2:85579777-85579796 | None:intergenic | 50.0% | |
| GTGGTGACTGATGAGGATGA+CGG | + | chr1.2:85580067-85580086 | MS.gene066454:intron | 50.0% | |
| TACATGGGTGGCTATGGAGA+AGG | - | chr1.2:85579055-85579074 | None:intergenic | 50.0% | |
| TGAGAGAGAGTAGGAGAGAG+TGG | - | chr1.2:85579825-85579844 | None:intergenic | 50.0% | |
| TTTGGCTGCACCAATGTGCA+AGG | + | chr1.2:85577370-85577389 | MS.gene066454:CDS | 50.0% | |
| ! | CATGGTGATGCTGCATTCCA+TGG | - | chr1.2:85576771-85576790 | None:intergenic | 50.0% |
| ! | GATGACGGTGGTTATGTGGA+CGG | + | chr1.2:85580082-85580101 | MS.gene066454:intron | 50.0% |
| ! | TGAGGATGACGGTGGTTATG+TGG | + | chr1.2:85580078-85580097 | MS.gene066454:intron | 50.0% |
| !! | GGAGGGGTGTATTTTCTACG+TGG | + | chr1.2:85578442-85578461 | MS.gene066454:intron | 50.0% |
| ACCGCCTCCTGAAACCCAAT+AGG | - | chr1.2:85579906-85579925 | None:intergenic | 55.0% | |
| ACGGTGGTTATGTGGACGGA+GGG | + | chr1.2:85580086-85580105 | MS.gene066454:intron | 55.0% | |
| AGGAGAACGATGGTTGTCGG+AGG | + | chr1.2:85579934-85579953 | MS.gene066454:intron | 55.0% | |
| AGTCCCCGAAGTCAGACAAC+AGG | + | chr1.2:85581397-85581416 | MS.gene066454:CDS | 55.0% | |
| ATGGGAGGGTGGTAGAAGGA+CGG | + | chr1.2:85580129-85580148 | MS.gene066454:intron | 55.0% | |
| GATGACAGTGGTGAGAAGGG+TGG | + | chr1.2:85580045-85580064 | MS.gene066454:intron | 55.0% | |
| GTGGTTGCAGAGGAGAACGA+TGG | + | chr1.2:85579924-85579943 | MS.gene066454:intron | 55.0% | |
| TATTGGGTTTCAGGAGGCGG+TGG | + | chr1.2:85579905-85579924 | MS.gene066454:intron | 55.0% | |
| ! | AAGGGTGGTGGTGACTGATG+AGG | + | chr1.2:85580060-85580079 | MS.gene066454:intron | 55.0% |
| ! | AGGTGAAGCACCCACCATTG+TGG | + | chr1.2:85579119-85579138 | MS.gene066454:intron | 55.0% |
| ! | GAAGCACCCACCATTGTGGA+TGG | + | chr1.2:85579123-85579142 | MS.gene066454:intron | 55.0% |
| ! | GTGACTGATGAGGATGACGG+TGG | + | chr1.2:85580070-85580089 | MS.gene066454:intron | 55.0% |
| !! | CTGTGGCTCTGCTTTTGCAC+CGG | + | chr1.2:85577318-85577337 | MS.gene066454:CDS | 55.0% |
| !! | TAGAAGGACGGTGGTGCTGT+TGG | + | chr1.2:85580141-85580160 | MS.gene066454:intron | 55.0% |
| CGTCGCTCTCTTGCTCTCAC+CGG | + | chr1.2:85579796-85579815 | MS.gene066454:intron | 60.0% | |
| GACAGTGGTGAGAAGGGTGG+TGG | + | chr1.2:85580048-85580067 | MS.gene066454:intron | 60.0% | |
| GACGGTGGTTATGTGGACGG+AGG | + | chr1.2:85580085-85580104 | MS.gene066454:intron | 60.0% | |
| GAGTAGGAGAGAGTGGTCGC+CGG | - | chr1.2:85579818-85579837 | None:intergenic | 60.0% | |
| GGTCATGGGAGGGTGGTAGA+AGG | + | chr1.2:85580125-85580144 | MS.gene066454:intron | 60.0% | |
| GGTTATGTGGACGGAGGGTC+CGG | + | chr1.2:85580091-85580110 | MS.gene066454:intron | 60.0% | |
| CCATGACCGCCTCTCACCAC+CGG | - | chr1.2:85580113-85580132 | None:intergenic | 65.0% | |
| CGGTGGTGAGAGGCGGTCAT+GGG | + | chr1.2:85580111-85580130 | MS.gene066454:intron | 65.0% | |
| GGAGGGTGGTAGAAGGACGG+TGG | + | chr1.2:85580132-85580151 | MS.gene066454:intron | 65.0% | |
| GGTGAGAGGCGGTCATGGGA+GGG | + | chr1.2:85580115-85580134 | MS.gene066454:intron | 65.0% | |
| TATGTGGACGGAGGGTCCGG+TGG | + | chr1.2:85580094-85580113 | MS.gene066454:intron | 65.0% | |
| TCAGGAGGCGGTGGTTGCAG+AGG | + | chr1.2:85579914-85579933 | MS.gene066454:intron | 65.0% | |
| TGGTGAGAGGCGGTCATGGG+AGG | + | chr1.2:85580114-85580133 | MS.gene066454:intron | 65.0% | |
| ACGGAGGGTCCGGTGGTGAG+AGG | + | chr1.2:85580101-85580120 | MS.gene066454:intron | 70.0% | |
| CCGGTGGTGAGAGGCGGTCA+TGG | + | chr1.2:85580110-85580129 | MS.gene066454:intron | 70.0% | |
| GAGAGGCGGTCATGGGAGGG+TGG | + | chr1.2:85580118-85580137 | MS.gene066454:intron | 70.0% | |
| GAGGGTCCGGTGGTGAGAGG+CGG | + | chr1.2:85580104-85580123 | MS.gene066454:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85576376 | 85581932 | 85576376 | ID=MS.gene066454 |
| chr1.2 | mRNA | 85576376 | 85581932 | 85576376 | ID=MS.gene066454.t1;Parent=MS.gene066454 |
| chr1.2 | exon | 85576376 | 85576378 | 85576376 | ID=MS.gene066454.t1.exon1;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85576376 | 85576378 | 85576376 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85576475 | 85576504 | 85576475 | ID=MS.gene066454.t1.exon2;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85576475 | 85576504 | 85576475 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85576668 | 85576794 | 85576668 | ID=MS.gene066454.t1.exon3;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85576668 | 85576794 | 85576668 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85576892 | 85577038 | 85576892 | ID=MS.gene066454.t1.exon4;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85576892 | 85577038 | 85576892 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85577261 | 85577391 | 85577261 | ID=MS.gene066454.t1.exon5;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85577261 | 85577391 | 85577261 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85581281 | 85581418 | 85581281 | ID=MS.gene066454.t1.exon6;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85581281 | 85581418 | 85581281 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| chr1.2 | exon | 85581564 | 85581932 | 85581564 | ID=MS.gene066454.t1.exon7;Parent=MS.gene066454.t1 |
| chr1.2 | CDS | 85581564 | 85581932 | 85581564 | ID=cds.MS.gene066454.t1;Parent=MS.gene066454.t1 |
| Gene Sequence |
| Protein sequence |
