AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029137

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029137.t1 MTR_1g115340 97.752 1023 23 0 1 1023 1 1023 0.0 2092
MS.gene029137.t1 MTR_7g023770 87.707 1025 122 3 1 1023 1 1023 0.0 1903
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029137.t1 AT5G65750 81.587 1021 187 1 1 1020 1 1021 0.0 1796
MS.gene029137.t1 AT3G55410 81.373 1020 187 2 1 1020 1 1017 0.0 1790
MS.gene029137.t1 AT3G55410 81.373 1020 187 2 1 1020 1 1017 0.0 1790

Find 278 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTGAGTTTGGTGTTCT+TGG 0.092183 1.2:+85243638 MS.gene029137:CDS
GAGTTAAACCTGGCCCTTTA+TGG 0.130938 1.2:+85241403 MS.gene029137:CDS
ATGAAATATGGGAGCGTTTA+AGG 0.158377 1.2:-85242319 None:intergenic
TCCACCTCTCCGAGAATTTC+AGG 0.189628 1.2:+85241265 MS.gene029137:CDS
ATCACCATTGACATGAAATA+TGG 0.223030 1.2:-85242331 None:intergenic
TTACTGCGAAGCAGGTTCTT+AGG 0.225546 1.2:-85244450 None:intergenic
CTAGCTCAGTTTGCTCCTTC+TGG 0.246269 1.2:-85245676 None:intergenic
CTTACCGACAATTTCTTAGA+TGG 0.255162 1.2:+85241136 MS.gene029137:CDS
CTTCCCCTGTCTCGATCATT+TGG 0.259241 1.2:-85243009 None:intergenic
CAACATTTGAGTGATTATTT+TGG 0.260255 1.2:-85244566 None:intergenic
GTCCCACCTGTAGTATAATT+TGG 0.264600 1.2:-85242207 None:intergenic
TAGAGGAAGATTGAATGTTT+TGG 0.269599 1.2:+85241840 MS.gene029137:CDS
TGCAGCTCACTTTCTGAGTT+TGG 0.287479 1.2:+85243629 MS.gene029137:intron
TGGGACGAGCAGTGTCTATT+TGG 0.292842 1.2:+85241156 MS.gene029137:CDS
AACAAATTCAGGAATGTAAT+TGG 0.293090 1.2:+85244240 MS.gene029137:CDS
CACACAGCCTAAAATGTATA+AGG 0.293960 1.2:+85242482 MS.gene029137:CDS
ATAACTTCCATGAAGTCTTT+AGG 0.296416 1.2:+85245575 MS.gene029137:CDS
AATTTCAGGTCAAACGATTC+AGG 0.296807 1.2:+85241279 MS.gene029137:CDS
GAGATTGGCTTTCAGCATAT+TGG 0.308233 1.2:+85242756 MS.gene029137:CDS
CTGACCGTGACAAATGTAAT+TGG 0.312341 1.2:+85241584 MS.gene029137:CDS
CTTCAGGAACTTTGTGGGTC+AGG 0.319826 1.2:+85241240 MS.gene029137:CDS
CCCTCTGCAGCCACGGCTAC+TGG 0.320205 1.2:+85245638 MS.gene029137:CDS
GAGGAGAATACATTTGTCTT+TGG 0.324048 1.2:+85242008 MS.gene029137:CDS
GATTTATCAGAAGAAACTTT+TGG 0.326200 1.2:+85242628 MS.gene029137:CDS
AATCTCCCACTTGAATGCTC+TGG 0.328544 1.2:-85243842 None:intergenic
ATCCTAATTCATTGGTGATC+TGG 0.331080 1.2:+85243687 MS.gene029137:CDS
TACAGGTGCAGCTTGTGCTT+TGG 0.337749 1.2:-85241089 None:intergenic
CACTTGAATGCTCTGGGCCC+TGG 0.340908 1.2:-85243835 None:intergenic
GGACATCAGCAAAGAGGTTT+GGG 0.341859 1.2:+85241722 MS.gene029137:CDS
AGTTAAACCTGGCCCTTTAT+GGG 0.344083 1.2:+85241404 MS.gene029137:CDS
TCCCAGATCACCAATGAATT+AGG 0.344843 1.2:-85243689 None:intergenic
TGGTGTTCTTGGATTTGAAT+TGG 0.345720 1.2:+85243649 MS.gene029137:CDS
TCCCCTACCTAAAGACTTCA+TGG 0.348179 1.2:-85245582 None:intergenic
TCCATCTCAGGAATAATATA+AGG 0.352966 1.2:-85244203 None:intergenic
TACTCTTCGGAAACAAATTC+AGG 0.356657 1.2:+85244229 MS.gene029137:CDS
GTGAGAGCATACCAGGTTAA+TGG 0.357984 1.2:+85241325 MS.gene029137:CDS
CCTATCAATTTCCCTTACTA+AGG 0.361544 1.2:+85245722 MS.gene029137:CDS
TATGGGAGCGTTTAAGGCTT+TGG 0.362307 1.2:-85242313 None:intergenic
CAAATGTTGAGGAGGGTATC+AGG 0.366351 1.2:+85244580 MS.gene029137:CDS
GGTGTTCTTGGATTTGAATT+GGG 0.368751 1.2:+85243650 MS.gene029137:CDS
CAGCCTCGGTGAACCCATAA+AGG 0.369387 1.2:-85241417 None:intergenic
GGATGGTATAGAGCTGTTTC+CGG 0.371801 1.2:+85240950 MS.gene029137:CDS
GTGATCTGGGAGGCACAATT+TGG 0.372428 1.2:+85243701 MS.gene029137:CDS
TGAAAGTTTCTACTTGTTGA+TGG 0.374060 1.2:-85241049 None:intergenic
TACTGCGAAGCAGGTTCTTA+GGG 0.375309 1.2:-85244449 None:intergenic
CAGTAAACATCTCTTCGTTC+TGG 0.382072 1.2:-85243207 None:intergenic
TTAGTATGTTACCGTCGATT+TGG 0.382663 1.2:+85242432 MS.gene029137:CDS
CCTTAGTAAGGGAAATTGAT+AGG 0.383594 1.2:-85245722 None:intergenic
ATCGTTTGACCTGAAATTCT+CGG 0.383652 1.2:-85241274 None:intergenic
TGGGTTCACCGAGGCTGATC+TGG 0.383879 1.2:+85241423 MS.gene029137:CDS
CTATAGTTGCAGAGGTTGTT+TGG 0.384165 1.2:+85245498 MS.gene029137:intron
CTCGCCCTGTGCCGCTTACT+AGG 0.384213 1.2:+85241113 MS.gene029137:CDS
TCAAACATTTCTTTCATTCC+AGG 0.384857 1.2:-85241769 None:intergenic
CAATTTCTTCAGGAACTTTG+TGG 0.394080 1.2:+85241234 MS.gene029137:CDS
GAGATTGGAACGCTTTCTTC+AGG 0.395357 1.2:+85243859 MS.gene029137:CDS
GTCTGGAAGATAATCTTTGC+TGG 0.396814 1.2:-85242729 None:intergenic
AATTGATAGGTTCACTTTGA+AGG 0.399133 1.2:-85245709 None:intergenic
AAAGCCAAGCTAGATCCTTT+AGG 0.399215 1.2:+85241355 MS.gene029137:CDS
AGGGCCAGGTTTAACTCATC+AGG 0.400300 1.2:-85241397 None:intergenic
ATCTCCCACTTGAATGCTCT+GGG 0.407758 1.2:-85243841 None:intergenic
TGGACATCAGCAAAGAGGTT+TGG 0.409276 1.2:+85241721 MS.gene029137:CDS
TTTGACCGAGCATCTGATCT+TGG 0.409515 1.2:+85241787 MS.gene029137:CDS
ATTTGAATTGGGTTACTCAA+TGG 0.410105 1.2:+85243661 MS.gene029137:CDS
AGTCTTGGGACAATTTCTTC+AGG 0.414759 1.2:+85241224 MS.gene029137:CDS
AATGGAAAATCCTAATTCAT+TGG 0.416371 1.2:+85243679 MS.gene029137:CDS
TTCATAAACTACGCCTTGTC+CGG 0.417972 1.2:-85242163 None:intergenic
TTAGGGGTATGGAATATGTC+TGG 0.419990 1.2:+85241460 MS.gene029137:CDS
AGATGTTTACTGTTAGCAAT+AGG 0.422784 1.2:+85243218 MS.gene029137:CDS
ACATTACAATGAGAGGTTTA+CGG 0.423106 1.2:-85244425 None:intergenic
CTTTCATGTGGCCATTAACC+TGG 0.425935 1.2:-85241336 None:intergenic
TCCTAATTCATTGGTGATCT+GGG 0.426577 1.2:+85243688 MS.gene029137:CDS
AGAGCATTCAAGTGGGAGAT+TGG 0.427008 1.2:+85243844 MS.gene029137:CDS
GGTAACCATGTTCGTTTAAG+TGG 0.428951 1.2:+85243085 MS.gene029137:CDS
TGGCTTTCAGCATATTGGTC+TGG 0.429736 1.2:+85242761 MS.gene029137:CDS
TTCCCCTGTCTCGATCATTT+GGG 0.430139 1.2:-85243008 None:intergenic
CAAAGAGGTTTGGGCTTGAA+GGG 0.434029 1.2:+85241731 MS.gene029137:CDS
GATGAAGTCGGGCTCTATAC+AGG 0.434570 1.2:+85241928 MS.gene029137:CDS
GCAAAGAGGTTTGGGCTTGA+AGG 0.434740 1.2:+85241730 MS.gene029137:CDS
CAAGACTCGTCTACACTGTT+TGG 0.435583 1.2:-85241208 None:intergenic
TTCGCCACATTGATAGTTGA+AGG 0.435918 1.2:+85243064 MS.gene029137:CDS
AGCGGCACAGGGCGAGGTAC+AGG 0.437109 1.2:-85241106 None:intergenic
CAAGAGCTGATGGATGGTTT+CGG 0.438112 1.2:-85242604 None:intergenic
CGACTGAATTGTGTGGCCGC+AGG 0.439536 1.2:-85241628 None:intergenic
TCCACATGGTTATGATGGCC+AGG 0.440622 1.2:+85243817 MS.gene029137:CDS
TTGCGAAGATCTGCCTGACT+TGG 0.442621 1.2:-85242274 None:intergenic
GTAGTTCATGATCAGACAAA+TGG 0.444012 1.2:+85243148 MS.gene029137:CDS
AAGCTTATTGTGGAAGCATT+GGG 0.444596 1.2:+85241542 MS.gene029137:CDS
ATGAAGATCCACTTCGATAG+AGG 0.444811 1.2:-85241000 None:intergenic
CTAAGTGGCTGCGTCAGGCC+GGG 0.445956 1.2:+85243780 MS.gene029137:CDS
GAAAGCCAATCTCTTCTGTC+TGG 0.448363 1.2:-85242746 None:intergenic
TTCCATGAAGTCTTTAGGTA+GGG 0.450277 1.2:+85245580 MS.gene029137:CDS
GCAGTAAACCCACTTGTTGT+TGG 0.450461 1.2:+85242054 MS.gene029137:CDS
CAAGCTTATTGTGGAAGCAT+TGG 0.450565 1.2:+85241541 MS.gene029137:CDS
TCTCGTTGGACAAGGTCATA+AGG 0.451096 1.2:-85244836 None:intergenic
CAATTACATTTGTCACGGTC+AGG 0.451252 1.2:-85241583 None:intergenic
TGTCAAAACCAGGGTGTCCT+TGG 0.453576 1.2:-85244509 None:intergenic
TCTAAGTGGCTGCGTCAGGC+CGG 0.453645 1.2:+85243779 MS.gene029137:CDS
TCGCAAAATATCTGACGAAT+CGG 0.457235 1.2:-85241880 None:intergenic
AATTGAATGCTTCGCTATGC+CGG 0.457970 1.2:-85240969 None:intergenic
ATCTTCCAGACAGAAGAGAT+TGG 0.462055 1.2:+85242741 MS.gene029137:CDS
TAGTTCATGATCAGACAAAT+GGG 0.462248 1.2:+85243149 MS.gene029137:CDS
TGCAAGCCTTACTGCGAAGC+AGG 0.462792 1.2:-85244458 None:intergenic
TGAGTCTAAGTGGCTGCGTC+AGG 0.463047 1.2:+85243775 MS.gene029137:CDS
TCACTGCTTTGTGAGGAGTA+AGG 0.464401 1.2:-85242964 None:intergenic
GTTACTTGTGAGAGCATACC+AGG 0.464914 1.2:+85241318 MS.gene029137:CDS
CAAACAGTGTAGACGAGTCT+TGG 0.465400 1.2:+85241209 MS.gene029137:CDS
CGGATACGTGAAAGCTGCTC+AGG 0.469572 1.2:-85242794 None:intergenic
TATATGCAGAACCCTTAGTA+AGG 0.469759 1.2:-85245734 None:intergenic
GTCGGGCTCTATACAGGAAC+TGG 0.469840 1.2:+85241934 MS.gene029137:CDS
GACTGAATTGTGTGGCCGCA+GGG 0.471613 1.2:-85241627 None:intergenic
AATTTCTTCAGGAACTTTGT+GGG 0.472186 1.2:+85241235 MS.gene029137:CDS
TAAGAACCTGCTTCGCAGTA+AGG 0.475573 1.2:+85244452 MS.gene029137:CDS
GTTCCTTGTTTGTCAAAACC+AGG 0.475592 1.2:-85244519 None:intergenic
GCCGTGTCAAAATAGACCTA+AGG 0.476839 1.2:-85241513 None:intergenic
CCTCTTTGCTGATGTCCACT+TGG 0.477260 1.2:-85241716 None:intergenic
TTACGTTCTTCAAGACCTAA+AGG 0.477287 1.2:-85241370 None:intergenic
TCCTTATATTATTCCTGAGA+TGG 0.477593 1.2:+85244202 MS.gene029137:CDS
GCTCTTCCAAATTATACTAC+AGG 0.479583 1.2:+85242201 MS.gene029137:CDS
CCATGTTCGTTTAAGTGGCC+AGG 0.480301 1.2:+85243090 MS.gene029137:CDS
GGAGTCGAGAACATAGTAAT+GGG 0.480568 1.2:+85241808 MS.gene029137:CDS
GTAAGCCTAGTAAGCGGCAC+AGG 0.488540 1.2:-85241118 None:intergenic
AAGGTTCATCAATCTCATTA+TGG 0.488600 1.2:-85242455 None:intergenic
GAGAATACATTTGTCTTTGG+TGG 0.489958 1.2:+85242011 MS.gene029137:CDS
TCACCATTGACATGAAATAT+GGG 0.491053 1.2:-85242330 None:intergenic
ACGTTCCTCTTTCAACGTCC+TGG 0.491811 1.2:-85243108 None:intergenic
GGTCTACCAGTGGATGAAGT+CGG 0.492099 1.2:+85241916 MS.gene029137:CDS
GAACCTGTCGCCGTAAAACA+TGG 0.494360 1.2:-85244298 None:intergenic
GTGTATCCACCCATGTTCAT+TGG 0.494570 1.2:-85245533 None:intergenic
GTCTACCAGTGGATGAAGTC+GGG 0.494655 1.2:+85241917 MS.gene029137:CDS
ACCAGTAGCCGTGGCTGCAG+AGG 0.494701 1.2:-85245639 None:intergenic
ATTCTCCTCCCGCCCCTGGT+TGG 0.495295 1.2:-85241994 None:intergenic
CGTGCCCAAATGATCGAGAC+AGG 0.496128 1.2:+85243004 MS.gene029137:CDS
AATCTTGTGCAGGGTGAAGC+CGG 0.496982 1.2:+85242895 MS.gene029137:intron
ATGTATTCTCCTCCCGCCCC+TGG 0.499168 1.2:-85241998 None:intergenic
CTTTGCTGATGTCCACTTGG+TGG 0.499560 1.2:-85241713 None:intergenic
ATCGTCCGGTGCAGACCCTT+AGG 0.501099 1.2:+85241497 MS.gene029137:CDS
GTGACAAATGTAATTGGCTA+AGG 0.501832 1.2:+85241590 MS.gene029137:CDS
ATTGATAGGTTCACTTTGAA+GGG 0.501911 1.2:-85245708 None:intergenic
CTCGTTGTGTTACTTCCACA+TGG 0.503101 1.2:+85243803 MS.gene029137:CDS
CAGCAGCAAGTTCACATACA+TGG 0.503369 1.2:-85242371 None:intergenic
TTTACAACTGATCCCAAGTC+AGG 0.506242 1.2:+85242261 MS.gene029137:CDS
TGATAAATCTCAAGAGCTGA+TGG 0.508623 1.2:-85242614 None:intergenic
CTGAGATGGATCCTACTCTT+CGG 0.512265 1.2:+85244216 MS.gene029137:CDS
AAACAGTGTAGACGAGTCTT+GGG 0.514129 1.2:+85241210 MS.gene029137:CDS
TGGAGGAGCTTCAAAGAGCA+TGG 0.514351 1.2:+85241176 MS.gene029137:CDS
GCTCCCATATTTCATGTCAA+TGG 0.514905 1.2:+85242327 MS.gene029137:CDS
CTAGTAAGCGGCACAGGGCG+AGG 0.515278 1.2:-85241112 None:intergenic
CGTTCTGGTTCATTATCACA+TGG 0.516335 1.2:-85243192 None:intergenic
AGTCGACAACCACATCTGAA+TGG 0.516398 1.2:-85242410 None:intergenic
CGGTGAACCCATAAAGGGCC+AGG 0.516840 1.2:-85241411 None:intergenic
TTACCGACAATTTCTTAGAT+GGG 0.520335 1.2:+85241137 MS.gene029137:CDS
TCAAGAAGAGCCAATGAACA+TGG 0.521309 1.2:+85245523 MS.gene029137:CDS
TGAATTTGTTTCCGAAGAGT+AGG 0.521380 1.2:-85244227 None:intergenic
ATGTACTATACCCAGTGTTA+CGG 0.521689 1.2:-85242814 None:intergenic
AGACAGGGGAAGATATTGAC+TGG 0.523628 1.2:+85243020 MS.gene029137:CDS
CGTCCCATCTAAGAAATTGT+CGG 0.525592 1.2:-85241140 None:intergenic
CTATCAATTTCCCTTACTAA+GGG 0.525720 1.2:+85245723 MS.gene029137:CDS
AAGACCTAAAGGATCTAGCT+TGG 0.527988 1.2:-85241359 None:intergenic
CTCGTTGGACAAGGTCATAA+GGG 0.530435 1.2:-85244835 None:intergenic
ACCTGAAATTCTCGGAGAGG+TGG 0.531196 1.2:-85241266 None:intergenic
AGGCGTCTAATACTATGTTC+TGG 0.532093 1.2:+85244600 MS.gene029137:CDS
ACTTAGACTCACCACAGCTC+AGG 0.533201 1.2:-85243763 None:intergenic
TTACTTCCACATGGTTATGA+TGG 0.537672 1.2:+85243812 MS.gene029137:CDS
TGCGGCCACACAATTCAGTC+GGG 0.537804 1.2:+85241630 MS.gene029137:CDS
CTTCCATGAAGTCTTTAGGT+AGG 0.539887 1.2:+85245579 MS.gene029137:CDS
GGTTCATTATCACATGGTCA+AGG 0.542099 1.2:-85243186 None:intergenic
CAAAGGATGTTGCAATATGT+AGG 0.542821 1.2:+85244792 MS.gene029137:CDS
CGAAGAGTAGGATCCATCTC+AGG 0.543027 1.2:-85244215 None:intergenic
AGCCTCGGTGAACCCATAAA+GGG 0.543896 1.2:-85241416 None:intergenic
AGTGGCCAGGACGTTGAAAG+AGG 0.544146 1.2:+85243103 MS.gene029137:CDS
CCAGTAGCCGTGGCTGCAGA+GGG 0.544674 1.2:-85245638 None:intergenic
GTTCATTATCACATGGTCAA+GGG 0.545495 1.2:-85243185 None:intergenic
CTTTCACGTATCCGTAACAC+TGG 0.547399 1.2:+85242803 MS.gene029137:CDS
CTTCCAAATTATACTACAGG+TGG 0.549074 1.2:+85242204 MS.gene029137:CDS
TATGATGATGTTAAATATGT+CGG 0.549449 1.2:+85245608 MS.gene029137:CDS
GACGAGCAGTGTCTATTTGG+AGG 0.549512 1.2:+85241159 MS.gene029137:CDS
TGCGAAGATCTGCCTGACTT+GGG 0.550686 1.2:-85242273 None:intergenic
TTCTCTATCCAGATCAGCCT+CGG 0.551862 1.2:-85241431 None:intergenic
TCCATGAAGTCTTTAGGTAG+GGG 0.553162 1.2:+85245581 MS.gene029137:CDS
TGGAGTCGAGAACATAGTAA+TGG 0.553334 1.2:+85241807 MS.gene029137:CDS
TTTACTGCTTCCAAGTGACT+AGG 0.553341 1.2:-85242039 None:intergenic
ATGATCGACCAACCAGGGGC+GGG 0.554266 1.2:+85241986 MS.gene029137:CDS
TGGAAGTAACACAACGAGCC+CGG 0.555576 1.2:-85243798 None:intergenic
TCTGAGTTTGATGATGTCCA+AGG 0.556376 1.2:+85244492 MS.gene029137:CDS
TGAGCTGTGGTGAGTCTAAG+TGG 0.558183 1.2:+85243765 MS.gene029137:CDS
GATATCGTTTAAGCTCTCGT+TGG 0.559043 1.2:-85244850 None:intergenic
CACGGCTACTGGTTTCCTCA+AGG 0.559781 1.2:+85245649 MS.gene029137:CDS
CTTCTTATGATCGACCAACC+AGG 0.560562 1.2:+85241980 MS.gene029137:CDS
CTGCGGCCACACAATTCAGT+CGG 0.560882 1.2:+85241629 MS.gene029137:CDS
TTCCTTGTTTGTCAAAACCA+GGG 0.561780 1.2:-85244518 None:intergenic
TGGTGATGTTAAATATCACT+TGG 0.562403 1.2:+85241954 MS.gene029137:CDS
CGGCTCGAGCAAGCTTATTG+TGG 0.563758 1.2:+85241532 MS.gene029137:CDS
GCTCCTTCTGGTGAACCTTG+AGG 0.567266 1.2:-85245664 None:intergenic
CGACTCCAAGATCAGATGCT+CGG 0.568828 1.2:-85241792 None:intergenic
AAAGAGGTTTGGGCTTGAAG+GGG 0.568860 1.2:+85241732 MS.gene029137:CDS
TCGTGCTCCCTCTGCAGCCA+CGG 0.569724 1.2:+85245631 MS.gene029137:CDS
TAAGGCTTTGGCAACATCAG+TGG 0.570847 1.2:-85242301 None:intergenic
TTTCCTCAAGGTTCACCAGA+AGG 0.574016 1.2:+85245661 MS.gene029137:CDS
TCTAATACTATGTTCTGGAA+AGG 0.576328 1.2:+85244605 MS.gene029137:CDS
TCAGACTTTCCATTCAGATG+TGG 0.576714 1.2:+85242401 MS.gene029137:CDS
GGTGGCAAATCCTAGTCACT+TGG 0.578223 1.2:+85242029 MS.gene029137:CDS
TTAGGGGACATTACAATGAG+AGG 0.578673 1.2:-85244432 None:intergenic
TAATCACTCAAATGTTGAGG+AGG 0.580006 1.2:+85244572 MS.gene029137:CDS
AAAAGAAACCTCTATCGAAG+TGG 0.580490 1.2:+85240992 MS.gene029137:CDS
ATCCTCTTCACTGCTTTGTG+AGG 0.580703 1.2:-85242971 None:intergenic
GGAGGAGCTTCAAAGAGCAT+GGG 0.581135 1.2:+85241177 MS.gene029137:CDS
CTCCTCACAAAGCAGTGAAG+AGG 0.584295 1.2:+85242969 MS.gene029137:CDS
CGAGAACATAGTAATGGGAA+TGG 0.585965 1.2:+85241813 MS.gene029137:CDS
ATGAAGTCTTTAGGTAGGGG+AGG 0.586969 1.2:+85245584 MS.gene029137:CDS
AAGAGGTTTGGGCTTGAAGG+GGG 0.587159 1.2:+85241733 MS.gene029137:CDS
TTCTTATGATCGACCAACCA+GGG 0.587940 1.2:+85241981 MS.gene029137:CDS
TTCATTATCACATGGTCAAG+GGG 0.588669 1.2:-85243184 None:intergenic
GTTTAAGCTCTCGTTGGACA+AGG 0.589416 1.2:-85244844 None:intergenic
CCTGGCCACTTAAACGAACA+TGG 0.591297 1.2:-85243090 None:intergenic
ACGAACAAAGGTAGATGCAA+AGG 0.591340 1.2:+85244775 MS.gene029137:CDS
ATCGACCAACCAGGGGCGGG+AGG 0.593439 1.2:+85241989 MS.gene029137:CDS
ACTTGTTGATGGAACAATTG+TGG 0.593939 1.2:-85241038 None:intergenic
GACAGGGGAAGATATTGACT+GGG 0.595416 1.2:+85243021 MS.gene029137:CDS
GATGATGTCCAAGGACACCC+TGG 0.598289 1.2:+85244501 MS.gene029137:CDS
CCGTGTCAAAATAGACCTAA+GGG 0.600394 1.2:-85241512 None:intergenic
CAGGGCCCAGAGCATTCAAG+TGG 0.600899 1.2:+85243836 MS.gene029137:CDS
GGTGATGTTAAATATCACTT+GGG 0.602674 1.2:+85241955 MS.gene029137:CDS
GGGCCAGGTTTAACTCATCA+GGG 0.605243 1.2:-85241396 None:intergenic
ACTGCGAAGCAGGTTCTTAG+GGG 0.605529 1.2:-85244448 None:intergenic
TTAGCCAATTACATTTGTCA+CGG 0.606795 1.2:-85241588 None:intergenic
ACTGAATTGTGTGGCCGCAG+GGG 0.607583 1.2:-85241626 None:intergenic
TCTCAGGAATAATATAAGGA+TGG 0.609022 1.2:-85244199 None:intergenic
AAATAATCACTCAAATGTTG+AGG 0.609338 1.2:+85244569 MS.gene029137:CDS
AATCACTCAAATGTTGAGGA+GGG 0.611110 1.2:+85244573 MS.gene029137:CDS
AAATCTCAAGAGCTGATGGA+TGG 0.613166 1.2:-85242610 None:intergenic
TAGCGGTGGCGGTCTACCAG+TGG 0.616437 1.2:+85241906 MS.gene029137:CDS
ATTCAGTCGGGAGCGTTGTG+AGG 0.619301 1.2:+85241642 MS.gene029137:CDS
TGGACAAGGTCATAAGGGAA+AGG 0.619691 1.2:-85244830 None:intergenic
TCTCATTATGGCCAAATCGA+CGG 0.619734 1.2:-85242443 None:intergenic
TAGAGCCCGACTTCATCCAC+TGG 0.619771 1.2:-85241922 None:intergenic
TATGATCGACCAACCAGGGG+CGG 0.621592 1.2:+85241985 MS.gene029137:CDS
AAAACTTCTTGGCCACCAAG+TGG 0.621984 1.2:+85241701 MS.gene029137:CDS
CCACATGGTTATGATGGCCA+GGG 0.622395 1.2:+85243818 MS.gene029137:CDS
GGATGTTGCAATATGTAGGG+TGG 0.625280 1.2:+85244796 MS.gene029137:CDS
TGACAAATGTAATTGGCTAA+GGG 0.626052 1.2:+85241591 MS.gene029137:CDS
TTTGACAATTTCCTGAGCTG+TGG 0.626398 1.2:+85243752 MS.gene029137:CDS
CCTGAGTGAGAGCCATGGGA+TGG 0.626777 1.2:+85240933 None:intergenic
AATCCCTGATGAGTTAAACC+TGG 0.629777 1.2:+85241393 MS.gene029137:CDS
GAAGAGCCAATGAACATGGG+TGG 0.634696 1.2:+85245527 MS.gene029137:CDS
ATATGCAGAACCCTTAGTAA+GGG 0.635165 1.2:-85245733 None:intergenic
AACAGCTCTATACCATCCCA+TGG 0.635938 1.2:-85240945 None:intergenic
TTCATGGAAGTTATAAGCCG+TGG 0.637101 1.2:-85245566 None:intergenic
ACTTGATGATCAACGAACAA+AGG 0.638637 1.2:+85244763 MS.gene029137:CDS
GTAATGGGAATGGCACATAG+AGG 0.639268 1.2:+85241823 MS.gene029137:CDS
CTTGAGGAAACCAGTAGCCG+TGG 0.640041 1.2:-85245648 None:intergenic
GATCTAGCTTGGCTTTCATG+TGG 0.640805 1.2:-85241348 None:intergenic
CATTGAGAAGATACACAAGA+AGG 0.641702 1.2:+85242676 MS.gene029137:CDS
AAAGGATGTTGCAATATGTA+GGG 0.646866 1.2:+85244793 MS.gene029137:CDS
CCAAGTGGACATCAGCAAAG+AGG 0.651528 1.2:+85241716 MS.gene029137:CDS
ATAGACCTAAGGGTCTGCAC+CGG 0.653700 1.2:-85241502 None:intergenic
TTGACCTGAAATTCTCGGAG+AGG 0.656537 1.2:-85241269 None:intergenic
CAAGAAGAGCCAATGAACAT+GGG 0.658371 1.2:+85245524 MS.gene029137:CDS
ACGCTCCCGACTGAATTGTG+TGG 0.658409 1.2:-85241635 None:intergenic
GTGCCCAAATGATCGAGACA+GGG 0.662164 1.2:+85243005 MS.gene029137:CDS
TATGTGAACTTGCTGCTGAG+TGG 0.663207 1.2:+85242376 MS.gene029137:CDS
TAAGCCTAGTAAGCGGCACA+GGG 0.663448 1.2:-85241117 None:intergenic
TTCCAAATTATACTACAGGT+GGG 0.670371 1.2:+85242205 MS.gene029137:CDS
TGCCCAAATGATCGAGACAG+GGG 0.670418 1.2:+85243006 MS.gene029137:CDS
TCTGATCATGAACTACAGCA+TGG 0.677879 1.2:-85243141 None:intergenic
AGGGCCCAGAGCATTCAAGT+GGG 0.679507 1.2:+85243837 MS.gene029137:CDS
CCCTGGCCATCATAACCATG+TGG 0.690159 1.2:-85243818 None:intergenic
GTTACCTTCAACTATCAATG+TGG 0.690861 1.2:-85243068 None:intergenic
AGTTCATGATCAGACAAATG+GGG 0.692273 1.2:+85243150 MS.gene029137:CDS
TCATTATCACATGGTCAAGG+GGG 0.695392 1.2:-85243183 None:intergenic
TCTTATGATCGACCAACCAG+GGG 0.702480 1.2:+85241982 MS.gene029137:CDS
TTGTCGGTAAGCCTAGTAAG+CGG 0.704477 1.2:-85241124 None:intergenic
TAATTCATTGGTGATCTGGG+AGG 0.705918 1.2:+85243691 MS.gene029137:CDS
TCATGTCAATGGTGATGACG+TGG 0.719204 1.2:+85242338 MS.gene029137:CDS
TTTCACGTATCCGTAACACT+GGG 0.723315 1.2:+85242804 MS.gene029137:CDS
ACAGGGGAAGATATTGACTG+GGG 0.723426 1.2:+85243022 MS.gene029137:CDS
GGCCCTTTATGGGTTCACCG+AGG 0.734375 1.2:+85241414 MS.gene029137:CDS
GATCATGAACTACAGCATGG+CGG 0.764320 1.2:-85243138 None:intergenic
GGAGAAGATTGAAACCCCTG+CGG 0.773751 1.2:+85241612 MS.gene029137:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTTATAACACTTGA+TGG + chr1.2:85243542-85243561 MS.gene029137:intron 15.0%
!! ATAAGAGAATAATAAACAAA+AGG - chr1.2:85242513-85242532 None:intergenic 15.0%
!! ATTCTCTTATTCTTTAAATA+TGG + chr1.2:85242523-85242542 MS.gene029137:intron 15.0%
!! TAAGAGAATAATAAACAAAA+GGG - chr1.2:85242512-85242531 None:intergenic 15.0%
!!! AAAAAAATTCTTTTAGTTCA+AGG - chr1.2:85243996-85244015 None:intergenic 15.0%
!!! AATTCTAAATGATGAATTTT+TGG + chr1.2:85242706-85242725 MS.gene029137:CDS 15.0%
!!! AATTTCAATAACATTTTTTC+TGG - chr1.2:85245230-85245249 None:intergenic 15.0%
!!! ACTTAATCATCATTAAATTT+TGG + chr1.2:85245397-85245416 MS.gene029137:intron 15.0%
!!! CTTAATCATCATTAAATTTT+GGG + chr1.2:85245398-85245417 MS.gene029137:intron 15.0%
!!! TAATGATAGATTTTTCATTT+TGG + chr1.2:85243576-85243595 MS.gene029137:intron 15.0%
!!! TTGAACTAAAAGAATTTTTT+TGG + chr1.2:85243995-85244014 MS.gene029137:intron 15.0%
!! AATGATACTTAGTAAGTAAA+TGG - chr1.2:85243466-85243485 None:intergenic 20.0%
!! GAAATTACTTTGAATTCTTA+CGG + chr1.2:85245244-85245263 MS.gene029137:intron 20.0%
!! TTTCTAAATGTCAAAAAATG+TGG + chr1.2:85245274-85245293 MS.gene029137:intron 20.0%
!!! AACTAAAAGAATTTTTTTGG+AGG + chr1.2:85243998-85244017 MS.gene029137:intron 20.0%
!!! AATCAGATTTTAAACTTTCT+TGG + chr1.2:85242566-85242585 MS.gene029137:intron 20.0%
!!! CAAATTTTTTCCATGTTTTA+CGG + chr1.2:85244288-85244307 MS.gene029137:CDS 20.0%
!!! TATGATGATGTTAAATATGT+CGG + chr1.2:85245608-85245627 MS.gene029137:CDS 20.0%
! AAAACATGGAAAAAATTTGC+TGG - chr1.2:85244287-85244306 None:intergenic 25.0%
! AAAGATGCAACAATATCATA+GGG - chr1.2:85245035-85245054 None:intergenic 25.0%
! AAATAATCACTCAAATGTTG+AGG + chr1.2:85244569-85244588 MS.gene029137:CDS 25.0%
! AACAAATTCAGGAATGTAAT+TGG + chr1.2:85244240-85244259 MS.gene029137:CDS 25.0%
! AATGGAAAATCCTAATTCAT+TGG + chr1.2:85243679-85243698 MS.gene029137:CDS 25.0%
! ATAGCGTATCAATTATTACT+TGG - chr1.2:85243610-85243629 None:intergenic 25.0%
! CATTAGAGATTTCTAAATGT+AGG + chr1.2:85245316-85245335 MS.gene029137:intron 25.0%
! CCTGCAATTCAATATTTATA+AGG - chr1.2:85245429-85245448 None:intergenic 25.0%
! CCTTATAAATATTGAATTGC+AGG + chr1.2:85245426-85245445 MS.gene029137:intron 25.0%
! CGACAAATTAAAATTTAGCT+AGG - chr1.2:85243390-85243409 None:intergenic 25.0%
! TAAAGATGCAACAATATCAT+AGG - chr1.2:85245036-85245055 None:intergenic 25.0%
! TATGATTGTCAATGTCTTAT+AGG + chr1.2:85244730-85244749 MS.gene029137:intron 25.0%
! TCAAAGCAAGAGTAATAAAT+TGG + chr1.2:85245111-85245130 MS.gene029137:intron 25.0%
! TCTACTGAATTATTTACAGA+TGG + chr1.2:85244169-85244188 MS.gene029137:intron 25.0%
! TGAAACTTAGAATTCATAAC+TGG + chr1.2:85243338-85243357 MS.gene029137:intron 25.0%
! TGAATATCATTGAAAGATGA+AGG - chr1.2:85244128-85244147 None:intergenic 25.0%
! TGGTATTAAGAAAATAAACC+AGG + chr1.2:85243267-85243286 MS.gene029137:intron 25.0%
!! AATCTCTAATGAATTGACTT+TGG - chr1.2:85245307-85245326 None:intergenic 25.0%
!! CAACATTTGAGTGATTATTT+TGG - chr1.2:85244569-85244588 None:intergenic 25.0%
!! GATCTTCATTTTATGCAATA+CGG + chr1.2:85241014-85241033 MS.gene029137:CDS 25.0%
!! GATTTATCAGAAGAAACTTT+TGG + chr1.2:85242628-85242647 MS.gene029137:CDS 25.0%
!! TGGATAGAGAATTCTTTTTA+GGG + chr1.2:85241443-85241462 MS.gene029137:CDS 25.0%
!!! AATAACATTTTTTCTGGTAG+TGG - chr1.2:85245224-85245243 None:intergenic 25.0%
!!! AGAAGAAACTTTTGGAATTA+GGG + chr1.2:85242636-85242655 MS.gene029137:CDS 25.0%
!!! ATGGATCATATATTTTGAAC+AGG - chr1.2:85243447-85243466 None:intergenic 25.0%
!!! GATTATTTTGGTCTTTTATG+AGG - chr1.2:85244557-85244576 None:intergenic 25.0%
!!! GATTTTTTTATTGCATGTTG+AGG + chr1.2:85244913-85244932 MS.gene029137:intron 25.0%
!!! TACACTTTTTGAAAACTTCT+TGG + chr1.2:85241690-85241709 MS.gene029137:CDS 25.0%
!!! TGGATCATATATTTTGAACA+GGG - chr1.2:85243446-85243465 None:intergenic 25.0%
!!! TTCAAAACTCTCTTTAGAAT+GGG + chr1.2:85244885-85244904 MS.gene029137:intron 25.0%
AAAAGAAACTATCGTCGATA+TGG - chr1.2:85245085-85245104 None:intergenic 30.0%
AAACTTTCTTGGCTATGTAT+AGG + chr1.2:85242577-85242596 MS.gene029137:intron 30.0%
AAAGACAAAACATCTTCCAA+AGG - chr1.2:85244093-85244112 None:intergenic 30.0%
AAAGGATGTTGCAATATGTA+GGG + chr1.2:85244793-85244812 MS.gene029137:CDS 30.0%
AAGGTTCATCAATCTCATTA+TGG - chr1.2:85242458-85242477 None:intergenic 30.0%
AATACCATTACATACACATG+TGG - chr1.2:85243254-85243273 None:intergenic 30.0%
AATTGATAGGTTCACTTTGA+AGG - chr1.2:85245712-85245731 None:intergenic 30.0%
AATTTCTTCAGGAACTTTGT+GGG + chr1.2:85241235-85241254 MS.gene029137:CDS 30.0%
ACATTACAATGAGAGGTTTA+CGG - chr1.2:85244428-85244447 None:intergenic 30.0%
AGATGTTTACTGTTAGCAAT+AGG + chr1.2:85243218-85243237 MS.gene029137:CDS 30.0%
ATAACTTCCATGAAGTCTTT+AGG + chr1.2:85245575-85245594 MS.gene029137:CDS 30.0%
ATCACAAAGTAGACCATAAT+TGG - chr1.2:85243963-85243982 None:intergenic 30.0%
ATCACCATTGACATGAAATA+TGG - chr1.2:85242334-85242353 None:intergenic 30.0%
ATGAGTAATGTTCGGAAATA+TGG - chr1.2:85244681-85244700 None:intergenic 30.0%
ATTGATAGGTTCACTTTGAA+GGG - chr1.2:85245711-85245730 None:intergenic 30.0%
ATTTGAATTGGGTTACTCAA+TGG + chr1.2:85243661-85243680 MS.gene029137:CDS 30.0%
GAAAAGTAACATTGTAAACC+TGG - chr1.2:85243288-85243307 None:intergenic 30.0%
GCTGAAAGAATGAAAAACAT+GGG + chr1.2:85242111-85242130 MS.gene029137:CDS 30.0%
GGTGATGTTAAATATCACTT+GGG + chr1.2:85241955-85241974 MS.gene029137:CDS 30.0%
TAGTTCATGATCAGACAAAT+GGG + chr1.2:85243149-85243168 MS.gene029137:CDS 30.0%
TCAAACATTTCTTTCATTCC+AGG - chr1.2:85241772-85241791 None:intergenic 30.0%
TCAAAGCAATGAGTAATGTT+CGG - chr1.2:85244689-85244708 None:intergenic 30.0%
TCACCATTGACATGAAATAT+GGG - chr1.2:85242333-85242352 None:intergenic 30.0%
TCCAACAGTAATCAACATAA+AGG - chr1.2:85243509-85243528 None:intergenic 30.0%
TCCATCTCAGGAATAATATA+AGG - chr1.2:85244206-85244225 None:intergenic 30.0%
TCCTTATATTATTCCTGAGA+TGG + chr1.2:85244202-85244221 MS.gene029137:CDS 30.0%
TCTCAGGAATAATATAAGGA+TGG - chr1.2:85244202-85244221 None:intergenic 30.0%
TGACAAATGTAATTGGCTAA+GGG + chr1.2:85241591-85241610 MS.gene029137:CDS 30.0%
TGCTGAAAGAATGAAAAACA+TGG + chr1.2:85242110-85242129 MS.gene029137:CDS 30.0%
TTACCGACAATTTCTTAGAT+GGG + chr1.2:85241137-85241156 MS.gene029137:CDS 30.0%
TTAGCCAATTACATTTGTCA+CGG - chr1.2:85241591-85241610 None:intergenic 30.0%
TTATTCTTTCTGCATGAATC+TGG + chr1.2:85243934-85243953 MS.gene029137:intron 30.0%
TTCCAAATTATACTACAGGT+GGG + chr1.2:85242205-85242224 MS.gene029137:CDS 30.0%
TTCTAAATGTAGGAAAGCTT+TGG + chr1.2:85245326-85245345 MS.gene029137:intron 30.0%
! ACTAGTTTCCACACTATTAA+CGG - chr1.2:85244968-85244987 None:intergenic 30.0%
! AGAGGAAGATTGAATGTTTT+GGG + chr1.2:85241841-85241860 MS.gene029137:CDS 30.0%
! CTGGATAGAGAATTCTTTTT+AGG + chr1.2:85241442-85241461 MS.gene029137:CDS 30.0%
! GGATAGAGAATTCTTTTTAG+GGG + chr1.2:85241444-85241463 MS.gene029137:CDS 30.0%
! GTTCAAAACTCTCTTTAGAA+TGG + chr1.2:85244884-85244903 MS.gene029137:intron 30.0%
! TAGAGGAAGATTGAATGTTT+TGG + chr1.2:85241840-85241859 MS.gene029137:CDS 30.0%
! TGAAAGTTTCTACTTGTTGA+TGG - chr1.2:85241052-85241071 None:intergenic 30.0%
! TGGTGATGTTAAATATCACT+TGG + chr1.2:85241954-85241973 MS.gene029137:CDS 30.0%
!! ATGTTTTGGGTAATGTAGTT+CGG + chr1.2:85241854-85241873 MS.gene029137:CDS 30.0%
!! CCAACATTTTTCAAAATCTC+CGG - chr1.2:85242917-85242936 None:intergenic 30.0%
!! CGGAGATTTTGAAAAATGTT+GGG + chr1.2:85242915-85242934 MS.gene029137:CDS 30.0%
!! GATTTTGAAAAATGTTGGGA+AGG + chr1.2:85242919-85242938 MS.gene029137:CDS 30.0%
!! TCTAATACTATGTTCTGGAA+AGG + chr1.2:85244605-85244624 MS.gene029137:CDS 30.0%
!!! CAGAAGAAACTTTTGGAATT+AGG + chr1.2:85242635-85242654 MS.gene029137:CDS 30.0%
!!! GAAGAAACTTTTGGAATTAG+GGG + chr1.2:85242637-85242656 MS.gene029137:CDS 30.0%
!!! GTTGTGAGGTTATTTTTGAT+AGG + chr1.2:85241656-85241675 MS.gene029137:CDS 30.0%
!!! TTATTTTTGATAGGCTTGCT+TGG + chr1.2:85241665-85241684 MS.gene029137:CDS 30.0%
!!! TTTTTTTGGAGGTCAGATTT+AGG + chr1.2:85244009-85244028 MS.gene029137:intron 30.0%
AAAAGAAACCTCTATCGAAG+TGG + chr1.2:85240992-85241011 MS.gene029137:CDS 35.0%
AATCACTCAAATGTTGAGGA+GGG + chr1.2:85244573-85244592 MS.gene029137:CDS 35.0%
AATGCTTCAGAGAAGTTTCA+AGG - chr1.2:85243915-85243934 None:intergenic 35.0%
AGTTCATGATCAGACAAATG+GGG + chr1.2:85243150-85243169 MS.gene029137:CDS 35.0%
ATCGTTTGACCTGAAATTCT+CGG - chr1.2:85241277-85241296 None:intergenic 35.0%
ATCTATGATCAATCTTGTGC+AGG + chr1.2:85242885-85242904 MS.gene029137:intron 35.0%
ATGAACAGTCAGTTTGAATG+AGG - chr1.2:85244639-85244658 None:intergenic 35.0%
ATGAATCTGGTTGCCAATTA+TGG + chr1.2:85243947-85243966 MS.gene029137:intron 35.0%
ATGTACTATACCCAGTGTTA+CGG - chr1.2:85242817-85242836 None:intergenic 35.0%
CAAAGGATGTTGCAATATGT+AGG + chr1.2:85244792-85244811 MS.gene029137:CDS 35.0%
CAATTTCTTCAGGAACTTTG+TGG + chr1.2:85241234-85241253 MS.gene029137:CDS 35.0%
CACACAGCCTAAAATGTATA+AGG + chr1.2:85242482-85242501 MS.gene029137:CDS 35.0%
CAGCCTAAAATGTATAAGGT+TGG + chr1.2:85242486-85242505 MS.gene029137:intron 35.0%
CATTGAGAAGATACACAAGA+AGG + chr1.2:85242676-85242695 MS.gene029137:CDS 35.0%
CTTACCGACAATTTCTTAGA+TGG + chr1.2:85241136-85241155 MS.gene029137:CDS 35.0%
CTTCCAAATTATACTACAGG+TGG + chr1.2:85242204-85242223 MS.gene029137:CDS 35.0%
GAGAATACATTTGTCTTTGG+TGG + chr1.2:85242011-85242030 MS.gene029137:CDS 35.0%
GAGGAGAATACATTTGTCTT+TGG + chr1.2:85242008-85242027 MS.gene029137:CDS 35.0%
GCTCTTCCAAATTATACTAC+AGG + chr1.2:85242201-85242220 MS.gene029137:CDS 35.0%
GGTGTTCTTGGATTTGAATT+GGG + chr1.2:85243650-85243669 MS.gene029137:CDS 35.0%
GTAGTTCATGATCAGACAAA+TGG + chr1.2:85243148-85243167 MS.gene029137:CDS 35.0%
GTGACAAATGTAATTGGCTA+AGG + chr1.2:85241590-85241609 MS.gene029137:CDS 35.0%
GTTACCTTCAACTATCAATG+TGG - chr1.2:85243071-85243090 None:intergenic 35.0%
GTTCATTATCACATGGTCAA+GGG - chr1.2:85243188-85243207 None:intergenic 35.0%
TAATCACTCAAATGTTGAGG+AGG + chr1.2:85244572-85244591 MS.gene029137:CDS 35.0%
TACTCTTCGGAAACAAATTC+AGG + chr1.2:85244229-85244248 MS.gene029137:CDS 35.0%
TCGCAAAATATCTGACGAAT+CGG - chr1.2:85241883-85241902 None:intergenic 35.0%
TCTATGATCAATCTTGTGCA+GGG + chr1.2:85242886-85242905 MS.gene029137:intron 35.0%
TCTTCCACATGTGTATGTAA+TGG + chr1.2:85243247-85243266 MS.gene029137:intron 35.0%
TGAACAGTCAGTTTGAATGA+GGG - chr1.2:85244638-85244657 None:intergenic 35.0%
TGATAAATCTCAAGAGCTGA+TGG - chr1.2:85242617-85242636 None:intergenic 35.0%
TGGTGTTCTTGGATTTGAAT+TGG + chr1.2:85243649-85243668 MS.gene029137:CDS 35.0%
TTACGTTCTTCAAGACCTAA+AGG - chr1.2:85241373-85241392 None:intergenic 35.0%
TTACTTCCACATGGTTATGA+TGG + chr1.2:85243812-85243831 MS.gene029137:CDS 35.0%
TTCATTATCACATGGTCAAG+GGG - chr1.2:85243187-85243206 None:intergenic 35.0%
TTCCATGAAGTCTTTAGGTA+GGG + chr1.2:85245580-85245599 MS.gene029137:CDS 35.0%
! AATTTCAGGTCAAACGATTC+AGG + chr1.2:85241279-85241298 MS.gene029137:CDS 35.0%
! ACTTGATGATCAACGAACAA+AGG + chr1.2:85244763-85244782 MS.gene029137:CDS 35.0%
! ACTTGTTGATGGAACAATTG+TGG - chr1.2:85241041-85241060 None:intergenic 35.0%
! ATCCTAATTCATTGGTGATC+TGG + chr1.2:85243687-85243706 MS.gene029137:CDS 35.0%
! ATTTTAGGCTGTGTGAAAGA+AGG - chr1.2:85242477-85242496 None:intergenic 35.0%
! ATTTTTGTCAGAGAATCGTC+CGG + chr1.2:85241483-85241502 MS.gene029137:CDS 35.0%
! CAGATATTTTGCGAGTTTAG+CGG + chr1.2:85241889-85241908 MS.gene029137:CDS 35.0%
! CTAATCTCTGCTTGTTAGTT+GGG + chr1.2:85245138-85245157 MS.gene029137:intron 35.0%
! GAGTTTTTCCAACAACAAGT+GGG - chr1.2:85242065-85242084 None:intergenic 35.0%
! GATACACATACGTTTTACCA+CGG + chr1.2:85245549-85245568 MS.gene029137:CDS 35.0%
! GCCTTTATGTTGATTACTGT+TGG + chr1.2:85243505-85243524 MS.gene029137:intron 35.0%
! TCCTAATTCATTGGTGATCT+GGG + chr1.2:85243688-85243707 MS.gene029137:CDS 35.0%
! TCTAATCTCTGCTTGTTAGT+TGG + chr1.2:85245137-85245156 MS.gene029137:intron 35.0%
! TGAATTTGTTTCCGAAGAGT+AGG - chr1.2:85244230-85244249 None:intergenic 35.0%
! TTAGTATGTTACCGTCGATT+TGG + chr1.2:85242432-85242451 MS.gene029137:CDS 35.0%
! TTCCTTGTTTGTCAAAACCA+GGG - chr1.2:85244521-85244540 None:intergenic 35.0%
! TTTTTGTGCTATAGTTGCAG+AGG + chr1.2:85245490-85245509 MS.gene029137:intron 35.0%
!! AAGCTTATTGTGGAAGCATT+GGG + chr1.2:85241542-85241561 MS.gene029137:CDS 35.0%
!! ATGAAATATGGGAGCGTTTA+AGG - chr1.2:85242322-85242341 None:intergenic 35.0%
!! CAATTTGGTGATTTTGCGAA+TGG + chr1.2:85243716-85243735 MS.gene029137:CDS 35.0%
!! CCGGAGATTTTGAAAAATGT+TGG + chr1.2:85242914-85242933 MS.gene029137:CDS 35.0%
!! GAGAATTCTTTTTAGGGGTA+TGG + chr1.2:85241449-85241468 MS.gene029137:CDS 35.0%
!! TTTTATGAGGCGCTTAAATC+TGG - chr1.2:85244544-85244563 None:intergenic 35.0%
!!! ACATTTTTTCTGGTAGTGGT+AGG - chr1.2:85245220-85245239 None:intergenic 35.0%
!!! GAGTTTTGAACAGACATACT+TGG - chr1.2:85244875-85244894 None:intergenic 35.0%
AAACAGTGTAGACGAGTCTT+GGG + chr1.2:85241210-85241229 MS.gene029137:CDS 40.0%
AAAGCCAAGCTAGATCCTTT+AGG + chr1.2:85241355-85241374 MS.gene029137:CDS 40.0%
AAATCTCAAGAGCTGATGGA+TGG - chr1.2:85242613-85242632 None:intergenic 40.0%
AAGACCTAAAGGATCTAGCT+TGG - chr1.2:85241362-85241381 None:intergenic 40.0%
AATCCCTGATGAGTTAAACC+TGG + chr1.2:85241393-85241412 MS.gene029137:CDS 40.0%
AATTGAATGCTTCGCTATGC+CGG - chr1.2:85240972-85240991 None:intergenic 40.0%
ACGAACAAAGGTAGATGCAA+AGG + chr1.2:85244775-85244794 MS.gene029137:CDS 40.0%
AGGCGTCTAATACTATGTTC+TGG + chr1.2:85244600-85244619 MS.gene029137:CDS 40.0%
AGTCTTGGGACAATTTCTTC+AGG + chr1.2:85241224-85241243 MS.gene029137:CDS 40.0%
AGTTAAACCTGGCCCTTTAT+GGG + chr1.2:85241404-85241423 MS.gene029137:CDS 40.0%
ATCTTCCAGACAGAAGAGAT+TGG + chr1.2:85242741-85242760 MS.gene029137:CDS 40.0%
ATGAAGATCCACTTCGATAG+AGG - chr1.2:85241003-85241022 None:intergenic 40.0%
CAAACTGACTGTTCATCTAG+TGG + chr1.2:85244643-85244662 MS.gene029137:intron 40.0%
CAAGAAGAGCCAATGAACAT+GGG + chr1.2:85245524-85245543 MS.gene029137:CDS 40.0%
CAATTACATTTGTCACGGTC+AGG - chr1.2:85241586-85241605 None:intergenic 40.0%
CAGTAAACATCTCTTCGTTC+TGG - chr1.2:85243210-85243229 None:intergenic 40.0%
CCGTGTCAAAATAGACCTAA+GGG - chr1.2:85241515-85241534 None:intergenic 40.0%
CGTCCCATCTAAGAAATTGT+CGG - chr1.2:85241143-85241162 None:intergenic 40.0%
CTATAGTTGCAGAGGTTGTT+TGG + chr1.2:85245498-85245517 MS.gene029137:intron 40.0%
CTGACCGTGACAAATGTAAT+TGG + chr1.2:85241584-85241603 MS.gene029137:CDS 40.0%
CTTCCATGAAGTCTTTAGGT+AGG + chr1.2:85245579-85245598 MS.gene029137:CDS 40.0%
GATATCGTTTAAGCTCTCGT+TGG - chr1.2:85244853-85244872 None:intergenic 40.0%
GCTCCCATATTTCATGTCAA+TGG + chr1.2:85242327-85242346 MS.gene029137:CDS 40.0%
GGAGTCGAGAACATAGTAAT+GGG + chr1.2:85241808-85241827 MS.gene029137:CDS 40.0%
GGTAACCATGTTCGTTTAAG+TGG + chr1.2:85243085-85243104 MS.gene029137:CDS 40.0%
GGTTCATTATCACATGGTCA+AGG - chr1.2:85243189-85243208 None:intergenic 40.0%
GTCCCACCTGTAGTATAATT+TGG - chr1.2:85242210-85242229 None:intergenic 40.0%
GTCTGGAAGATAATCTTTGC+TGG - chr1.2:85242732-85242751 None:intergenic 40.0%
TCAAGAAGAGCCAATGAACA+TGG + chr1.2:85245523-85245542 MS.gene029137:CDS 40.0%
TCAGACTTTCCATTCAGATG+TGG + chr1.2:85242401-85242420 MS.gene029137:CDS 40.0%
TCATTATCACATGGTCAAGG+GGG - chr1.2:85243186-85243205 None:intergenic 40.0%
TCCATGAAGTCTTTAGGTAG+GGG + chr1.2:85245581-85245600 MS.gene029137:CDS 40.0%
TCCCAGATCACCAATGAATT+AGG - chr1.2:85243692-85243711 None:intergenic 40.0%
TCTCATTATGGCCAAATCGA+CGG - chr1.2:85242446-85242465 None:intergenic 40.0%
TCTGATCATGAACTACAGCA+TGG - chr1.2:85243144-85243163 None:intergenic 40.0%
TGGAGTCGAGAACATAGTAA+TGG + chr1.2:85241807-85241826 MS.gene029137:CDS 40.0%
TTAGGGGACATTACAATGAG+AGG - chr1.2:85244435-85244454 None:intergenic 40.0%
TTCATAAACTACGCCTTGTC+CGG - chr1.2:85242166-85242185 None:intergenic 40.0%
TTCATGGAAGTTATAAGCCG+TGG - chr1.2:85245569-85245588 None:intergenic 40.0%
TTCTTATGATCGACCAACCA+GGG + chr1.2:85241981-85242000 MS.gene029137:CDS 40.0%
TTTACAACTGATCCCAAGTC+AGG + chr1.2:85242261-85242280 MS.gene029137:CDS 40.0%
TTTACTGCTTCCAAGTGACT+AGG - chr1.2:85242042-85242061 None:intergenic 40.0%
TTTCACGTATCCGTAACACT+GGG + chr1.2:85242804-85242823 MS.gene029137:CDS 40.0%
TTTGACAATTTCCTGAGCTG+TGG + chr1.2:85243752-85243771 MS.gene029137:CDS 40.0%
TTTGGAGGTCAGATTTAGGA+TGG + chr1.2:85244013-85244032 MS.gene029137:intron 40.0%
! ATATTTTGCGAGTTTAGCGG+TGG + chr1.2:85241892-85241911 MS.gene029137:CDS 40.0%
! CAAGCTTATTGTGGAAGCAT+TGG + chr1.2:85241541-85241560 MS.gene029137:CDS 40.0%
! CGAGAACATAGTAATGGGAA+TGG + chr1.2:85241813-85241832 MS.gene029137:CDS 40.0%
! CGAGTTTTTCCAACAACAAG+TGG - chr1.2:85242066-85242085 None:intergenic 40.0%
! GGGCCAACCTTATACATTTT+AGG - chr1.2:85242492-85242511 None:intergenic 40.0%
! GTTCCTTGTTTGTCAAAACC+AGG - chr1.2:85244522-85244541 None:intergenic 40.0%
! TAATTCATTGGTGATCTGGG+AGG + chr1.2:85243691-85243710 MS.gene029137:CDS 40.0%
! TTAGGGGTATGGAATATGTC+TGG + chr1.2:85241460-85241479 MS.gene029137:CDS 40.0%
! TTCGCCACATTGATAGTTGA+AGG + chr1.2:85243064-85243083 MS.gene029137:CDS 40.0%
! TTGTCTCTTGTTGCTTCCTT+TGG + chr1.2:85244074-85244093 MS.gene029137:intron 40.0%
! TTGTGAGGAGTAAGGTTTTC+AGG - chr1.2:85242959-85242978 None:intergenic 40.0%
!! CGTTCTGGTTCATTATCACA+TGG - chr1.2:85243195-85243214 None:intergenic 40.0%
!! CTTTCTGAGTTTGGTGTTCT+TGG + chr1.2:85243638-85243657 MS.gene029137:CDS 40.0%
!! GAGATTGGCTTTCAGCATAT+TGG + chr1.2:85242756-85242775 MS.gene029137:CDS 40.0%
!! TCTGAGTTTGATGATGTCCA+AGG + chr1.2:85244492-85244511 MS.gene029137:CDS 40.0%
!!! AACATGGGCGTTTTGATTCA+CGG + chr1.2:85242126-85242145 MS.gene029137:CDS 40.0%
!!! CCCTTAGGTCTATTTTGACA+CGG + chr1.2:85241512-85241531 MS.gene029137:CDS 40.0%
AAAACTTCTTGGCCACCAAG+TGG + chr1.2:85241701-85241720 MS.gene029137:CDS 45.0%
AAAGAGGTTTGGGCTTGAAG+GGG + chr1.2:85241732-85241751 MS.gene029137:CDS 45.0%
AATCTCCCACTTGAATGCTC+TGG - chr1.2:85243845-85243864 None:intergenic 45.0%
AGACAGGGGAAGATATTGAC+TGG + chr1.2:85243020-85243039 MS.gene029137:CDS 45.0%
AGTCGACAACCACATCTGAA+TGG - chr1.2:85242413-85242432 None:intergenic 45.0%
ATCCTCTTCACTGCTTTGTG+AGG - chr1.2:85242974-85242993 None:intergenic 45.0%
ATCTCCCACTTGAATGCTCT+GGG - chr1.2:85243844-85243863 None:intergenic 45.0%
ATGAAGTCTTTAGGTAGGGG+AGG + chr1.2:85245584-85245603 MS.gene029137:CDS 45.0%
CAAACAGTGTAGACGAGTCT+TGG + chr1.2:85241209-85241228 MS.gene029137:CDS 45.0%
CAAAGAGGTTTGGGCTTGAA+GGG + chr1.2:85241731-85241750 MS.gene029137:CDS 45.0%
CAAGACTCGTCTACACTGTT+TGG - chr1.2:85241211-85241230 None:intergenic 45.0%
CAGCAGCAAGTTCACATACA+TGG - chr1.2:85242374-85242393 None:intergenic 45.0%
CTCGTTGGACAAGGTCATAA+GGG - chr1.2:85244838-85244857 None:intergenic 45.0%
CTGAGATGGATCCTACTCTT+CGG + chr1.2:85244216-85244235 MS.gene029137:CDS 45.0%
CTTCTTATGATCGACCAACC+AGG + chr1.2:85241980-85241999 MS.gene029137:CDS 45.0%
CTTTCACGTATCCGTAACAC+TGG + chr1.2:85242803-85242822 MS.gene029137:CDS 45.0%
CTTTCATGTGGCCATTAACC+TGG - chr1.2:85241339-85241358 None:intergenic 45.0%
GAAAGCCAATCTCTTCTGTC+TGG - chr1.2:85242749-85242768 None:intergenic 45.0%
GAGATTGGAACGCTTTCTTC+AGG + chr1.2:85243859-85243878 MS.gene029137:CDS 45.0%
GAGTTAAACCTGGCCCTTTA+TGG + chr1.2:85241403-85241422 MS.gene029137:CDS 45.0%
GATCATGAACTACAGCATGG+CGG - chr1.2:85243141-85243160 None:intergenic 45.0%
GCCGTGTCAAAATAGACCTA+AGG - chr1.2:85241516-85241535 None:intergenic 45.0%
GGACATCAGCAAAGAGGTTT+GGG + chr1.2:85241722-85241741 MS.gene029137:CDS 45.0%
GGATGTTGCAATATGTAGGG+TGG + chr1.2:85244796-85244815 MS.gene029137:CDS 45.0%
GTGTATCCACCCATGTTCAT+TGG - chr1.2:85245536-85245555 None:intergenic 45.0%
GTTTAAGCTCTCGTTGGACA+AGG - chr1.2:85244847-85244866 None:intergenic 45.0%
TAAGAACCTGCTTCGCAGTA+AGG + chr1.2:85244452-85244471 MS.gene029137:CDS 45.0%
TACTGCGAAGCAGGTTCTTA+GGG - chr1.2:85244452-85244471 None:intergenic 45.0%
TCACTGCTTTGTGAGGAGTA+AGG - chr1.2:85242967-85242986 None:intergenic 45.0%
TCCACACTATTAACGGCAAC+AGG - chr1.2:85244961-85244980 None:intergenic 45.0%
TCCCCTACCTAAAGACTTCA+TGG - chr1.2:85245585-85245604 None:intergenic 45.0%
TCTCGTTGGACAAGGTCATA+AGG - chr1.2:85244839-85244858 None:intergenic 45.0%
TCTTATGATCGACCAACCAG+GGG + chr1.2:85241982-85242001 MS.gene029137:CDS 45.0%
TGCAGCTCACTTTCTGAGTT+TGG + chr1.2:85243629-85243648 MS.gene029137:intron 45.0%
TGGACAAGGTCATAAGGGAA+AGG - chr1.2:85244833-85244852 None:intergenic 45.0%
TGGACATCAGCAAAGAGGTT+TGG + chr1.2:85241721-85241740 MS.gene029137:CDS 45.0%
TGGCTTTCAGCATATTGGTC+TGG + chr1.2:85242761-85242780 MS.gene029137:CDS 45.0%
TTACTGCGAAGCAGGTTCTT+AGG - chr1.2:85244453-85244472 None:intergenic 45.0%
TTCCCCTGTCTCGATCATTT+GGG - chr1.2:85243011-85243030 None:intergenic 45.0%
TTCTCTATCCAGATCAGCCT+CGG - chr1.2:85241434-85241453 None:intergenic 45.0%
TTGACCTGAAATTCTCGGAG+AGG - chr1.2:85241272-85241291 None:intergenic 45.0%
TTGTCGGTAAGCCTAGTAAG+CGG - chr1.2:85241127-85241146 None:intergenic 45.0%
TTTCCTCAAGGTTCACCAGA+AGG + chr1.2:85245661-85245680 MS.gene029137:CDS 45.0%
TTTGACCGAGCATCTGATCT+TGG + chr1.2:85241787-85241806 MS.gene029137:CDS 45.0%
! ACAGGGGAAGATATTGACTG+GGG + chr1.2:85243022-85243041 MS.gene029137:CDS 45.0%
! AGAGCATTCAAGTGGGAGAT+TGG + chr1.2:85243844-85243863 MS.gene029137:CDS 45.0%
! ATCTCTGCTTGTTAGTTGGG+AGG + chr1.2:85245141-85245160 MS.gene029137:intron 45.0%
! CAAGAGCTGATGGATGGTTT+CGG - chr1.2:85242607-85242626 None:intergenic 45.0%
! GACAGGGGAAGATATTGACT+GGG + chr1.2:85243021-85243040 MS.gene029137:CDS 45.0%
! GATCTAGCTTGGCTTTCATG+TGG - chr1.2:85241351-85241370 None:intergenic 45.0%
! GGATGGTATAGAGCTGTTTC+CGG + chr1.2:85240950-85240969 MS.gene029137:CDS 45.0%
! GTAATGGGAATGGCACATAG+AGG + chr1.2:85241823-85241842 MS.gene029137:CDS 45.0%
! GTGAGAGCATACCAGGTTAA+TGG + chr1.2:85241325-85241344 MS.gene029137:CDS 45.0%
! GTTACTTGTGAGAGCATACC+AGG + chr1.2:85241318-85241337 MS.gene029137:CDS 45.0%
! TAAGGCTTTGGCAACATCAG+TGG - chr1.2:85242304-85242323 None:intergenic 45.0%
! TCATGTCAATGGTGATGACG+TGG + chr1.2:85242338-85242357 MS.gene029137:CDS 45.0%
! TTTCCATGTTTTACGGCGAC+AGG + chr1.2:85244295-85244314 MS.gene029137:CDS 45.0%
!! CAAATGTTGAGGAGGGTATC+AGG + chr1.2:85244580-85244599 MS.gene029137:CDS 45.0%
!! CTCGTTGTGTTACTTCCACA+TGG + chr1.2:85243803-85243822 MS.gene029137:CDS 45.0%
!! GCAGTAAACCCACTTGTTGT+TGG + chr1.2:85242054-85242073 MS.gene029137:CDS 45.0%
!! TATGGGAGCGTTTAAGGCTT+TGG - chr1.2:85242316-85242335 None:intergenic 45.0%
!! TATGTGAACTTGCTGCTGAG+TGG + chr1.2:85242376-85242395 MS.gene029137:CDS 45.0%
!! TATTGACTGGGGTTTTGCAG+AGG + chr1.2:85243033-85243052 MS.gene029137:CDS 45.0%
!!! CACCCTGGTTTTGACAAACA+AGG + chr1.2:85244516-85244535 MS.gene029137:CDS 45.0%
AAGAGGTTTGGGCTTGAAGG+GGG + chr1.2:85241733-85241752 MS.gene029137:CDS 50.0%
AATCTTGTGCAGGGTGAAGC+CGG + chr1.2:85242895-85242914 MS.gene029137:intron 50.0%
ACCTGAAATTCTCGGAGAGG+TGG - chr1.2:85241269-85241288 None:intergenic 50.0%
ACGTTCCTCTTTCAACGTCC+TGG - chr1.2:85243111-85243130 None:intergenic 50.0%
ACTGCGAAGCAGGTTCTTAG+GGG - chr1.2:85244451-85244470 None:intergenic 50.0%
ACTTAGACTCACCACAGCTC+AGG - chr1.2:85243766-85243785 None:intergenic 50.0%
AGCCTCGGTGAACCCATAAA+GGG - chr1.2:85241419-85241438 None:intergenic 50.0%
AGGGCCAGGTTTAACTCATC+AGG - chr1.2:85241400-85241419 None:intergenic 50.0%
ATAGACCTAAGGGTCTGCAC+CGG - chr1.2:85241505-85241524 None:intergenic 50.0%
CCAAGTGGACATCAGCAAAG+AGG + chr1.2:85241716-85241735 MS.gene029137:CDS 50.0%
CCACATGGTTATGATGGCCA+GGG + chr1.2:85243818-85243837 MS.gene029137:CDS 50.0%
CCATGTTCGTTTAAGTGGCC+AGG + chr1.2:85243090-85243109 MS.gene029137:CDS 50.0%
CCTCTTTGCTGATGTCCACT+TGG - chr1.2:85241719-85241738 None:intergenic 50.0%
CCTGGCCACTTAAACGAACA+TGG - chr1.2:85243093-85243112 None:intergenic 50.0%
CGAAGAGTAGGATCCATCTC+AGG - chr1.2:85244218-85244237 None:intergenic 50.0%
CGACTCCAAGATCAGATGCT+CGG - chr1.2:85241795-85241814 None:intergenic 50.0%
CTCCTCACAAAGCAGTGAAG+AGG + chr1.2:85242969-85242988 MS.gene029137:CDS 50.0%
CTTCAGGAACTTTGTGGGTC+AGG + chr1.2:85241240-85241259 MS.gene029137:CDS 50.0%
CTTCCCCTGTCTCGATCATT+TGG - chr1.2:85243012-85243031 None:intergenic 50.0%
CTTTGCTGATGTCCACTTGG+TGG - chr1.2:85241716-85241735 None:intergenic 50.0%
GAACCTGTCGCCGTAAAACA+TGG - chr1.2:85244301-85244320 None:intergenic 50.0%
GAAGAGCCAATGAACATGGG+TGG + chr1.2:85245527-85245546 MS.gene029137:CDS 50.0%
GACGAGCAGTGTCTATTTGG+AGG + chr1.2:85241159-85241178 MS.gene029137:CDS 50.0%
GATGAAGTCGGGCTCTATAC+AGG + chr1.2:85241928-85241947 MS.gene029137:CDS 50.0%
GCAAAGAGGTTTGGGCTTGA+AGG + chr1.2:85241730-85241749 MS.gene029137:CDS 50.0%
GCCTGTTGCCGTTAATAGTG+TGG + chr1.2:85244957-85244976 MS.gene029137:intron 50.0%
GGAGAAGATTGAAACCCCTG+CGG + chr1.2:85241612-85241631 MS.gene029137:CDS 50.0%
GGGCCAGGTTTAACTCATCA+GGG - chr1.2:85241399-85241418 None:intergenic 50.0%
GGTCTACCAGTGGATGAAGT+CGG + chr1.2:85241916-85241935 MS.gene029137:CDS 50.0%
GGTGGCAAATCCTAGTCACT+TGG + chr1.2:85242029-85242048 MS.gene029137:CDS 50.0%
GTCTACCAGTGGATGAAGTC+GGG + chr1.2:85241917-85241936 MS.gene029137:CDS 50.0%
GTGCCCAAATGATCGAGACA+GGG + chr1.2:85243005-85243024 MS.gene029137:CDS 50.0%
TAAGCCTAGTAAGCGGCACA+GGG - chr1.2:85241120-85241139 None:intergenic 50.0%
TACAGGTGCAGCTTGTGCTT+TGG - chr1.2:85241092-85241111 None:intergenic 50.0%
TCCACATGGTTATGATGGCC+AGG + chr1.2:85243817-85243836 MS.gene029137:CDS 50.0%
TCCACCTCTCCGAGAATTTC+AGG + chr1.2:85241265-85241284 MS.gene029137:CDS 50.0%
TGAGCTGTGGTGAGTCTAAG+TGG + chr1.2:85243765-85243784 MS.gene029137:CDS 50.0%
TGCCCAAATGATCGAGACAG+GGG + chr1.2:85243006-85243025 MS.gene029137:CDS 50.0%
TGCGAAGATCTGCCTGACTT+GGG - chr1.2:85242276-85242295 None:intergenic 50.0%
TGGAAGTAACACAACGAGCC+CGG - chr1.2:85243801-85243820 None:intergenic 50.0%
TGGAGGAGCTTCAAAGAGCA+TGG + chr1.2:85241176-85241195 MS.gene029137:CDS 50.0%
TGGGACGAGCAGTGTCTATT+TGG + chr1.2:85241156-85241175 MS.gene029137:CDS 50.0%
TTGCGAAGATCTGCCTGACT+TGG - chr1.2:85242277-85242296 None:intergenic 50.0%
! CTAGCTCAGTTTGCTCCTTC+TGG - chr1.2:85245679-85245698 None:intergenic 50.0%
! GGAGGAGCTTCAAAGAGCAT+GGG + chr1.2:85241177-85241196 MS.gene029137:CDS 50.0%
! GGAGGTCAGATTTAGGATGG+TGG + chr1.2:85244016-85244035 MS.gene029137:intron 50.0%
! GTGATCTGGGAGGCACAATT+TGG + chr1.2:85243701-85243720 MS.gene029137:CDS 50.0%
! TGTCAAAACCAGGGTGTCCT+TGG - chr1.2:85244512-85244531 None:intergenic 50.0%
! TTTTGCGAGTTTAGCGGTGG+CGG + chr1.2:85241895-85241914 MS.gene029137:CDS 50.0%
!!! GGCGTTTTGATTCACGGAGA+TGG + chr1.2:85242132-85242151 MS.gene029137:CDS 50.0%
ACGCTCCCGACTGAATTGTG+TGG - chr1.2:85241638-85241657 None:intergenic 55.0%
ACTGAATTGTGTGGCCGCAG+GGG - chr1.2:85241629-85241648 None:intergenic 55.0%
AGTGGCCAGGACGTTGAAAG+AGG + chr1.2:85243103-85243122 MS.gene029137:CDS 55.0%
CAGCCTCGGTGAACCCATAA+AGG - chr1.2:85241420-85241439 None:intergenic 55.0%
CCCTGGCCATCATAACCATG+TGG - chr1.2:85243821-85243840 None:intergenic 55.0%
CGGATACGTGAAAGCTGCTC+AGG - chr1.2:85242797-85242816 None:intergenic 55.0%
CGGCTCGAGCAAGCTTATTG+TGG + chr1.2:85241532-85241551 MS.gene029137:CDS 55.0%
CGTGCCCAAATGATCGAGAC+AGG + chr1.2:85243004-85243023 MS.gene029137:CDS 55.0%
CTGCGGCCACACAATTCAGT+CGG + chr1.2:85241629-85241648 MS.gene029137:CDS 55.0%
CTTGAGGAAACCAGTAGCCG+TGG - chr1.2:85245651-85245670 None:intergenic 55.0%
GACTGAATTGTGTGGCCGCA+GGG - chr1.2:85241630-85241649 None:intergenic 55.0%
GATGATGTCCAAGGACACCC+TGG + chr1.2:85244501-85244520 MS.gene029137:CDS 55.0%
GCTCCTTCTGGTGAACCTTG+AGG - chr1.2:85245667-85245686 None:intergenic 55.0%
GGGGGAGAGACTCTTATTCC+TGG + chr1.2:85241751-85241770 MS.gene029137:CDS 55.0%
GTAAGCCTAGTAAGCGGCAC+AGG - chr1.2:85241121-85241140 None:intergenic 55.0%
GTCGGGCTCTATACAGGAAC+TGG + chr1.2:85241934-85241953 MS.gene029137:CDS 55.0%
TACGGCGACAGGTTCGTAGT+TGG + chr1.2:85244306-85244325 MS.gene029137:intron 55.0%
TAGAGCCCGACTTCATCCAC+TGG - chr1.2:85241925-85241944 None:intergenic 55.0%
TATGATCGACCAACCAGGGG+CGG + chr1.2:85241985-85242004 MS.gene029137:CDS 55.0%
TGAGTCTAAGTGGCTGCGTC+AGG + chr1.2:85243775-85243794 MS.gene029137:CDS 55.0%
TGCAAGCCTTACTGCGAAGC+AGG - chr1.2:85244461-85244480 None:intergenic 55.0%
TGCGGCCACACAATTCAGTC+GGG + chr1.2:85241630-85241649 MS.gene029137:CDS 55.0%
! AGGGCCCAGAGCATTCAAGT+GGG + chr1.2:85243837-85243856 MS.gene029137:CDS 55.0%
! CACGGAGATGGCAGTTTTGC+CGG + chr1.2:85242144-85242163 MS.gene029137:CDS 55.0%
! GATGGCAGTTTTGCCGGACA+AGG + chr1.2:85242150-85242169 MS.gene029137:CDS 55.0%
!! ATTCAGTCGGGAGCGTTGTG+AGG + chr1.2:85241642-85241661 MS.gene029137:CDS 55.0%
!! CACGGCTACTGGTTTCCTCA+AGG + chr1.2:85245649-85245668 MS.gene029137:CDS 55.0%
ATCGTCCGGTGCAGACCCTT+AGG + chr1.2:85241497-85241516 MS.gene029137:CDS 60.0%
ATGATCGACCAACCAGGGGC+GGG + chr1.2:85241986-85242005 MS.gene029137:CDS 60.0%
ATGTATTCTCCTCCCGCCCC+TGG - chr1.2:85242001-85242020 None:intergenic 60.0%
CGACTGAATTGTGTGGCCGC+AGG - chr1.2:85241631-85241650 None:intergenic 60.0%
CGGTGAACCCATAAAGGGCC+AGG - chr1.2:85241414-85241433 None:intergenic 60.0%
GGCCCTTTATGGGTTCACCG+AGG + chr1.2:85241414-85241433 MS.gene029137:CDS 60.0%
TCTAAGTGGCTGCGTCAGGC+CGG + chr1.2:85243779-85243798 MS.gene029137:CDS 60.0%
TGGGTTCACCGAGGCTGATC+TGG + chr1.2:85241423-85241442 MS.gene029137:CDS 60.0%
! CACTTGAATGCTCTGGGCCC+TGG - chr1.2:85243838-85243857 None:intergenic 60.0%
! CAGGGCCCAGAGCATTCAAG+TGG + chr1.2:85243836-85243855 MS.gene029137:CDS 60.0%
ACCAGTAGCCGTGGCTGCAG+AGG - chr1.2:85245642-85245661 None:intergenic 65.0%
ATTCTCCTCCCGCCCCTGGT+TGG - chr1.2:85241997-85242016 None:intergenic 65.0%
CCAGTAGCCGTGGCTGCAGA+GGG - chr1.2:85245641-85245660 None:intergenic 65.0%
CTAAGTGGCTGCGTCAGGCC+GGG + chr1.2:85243780-85243799 MS.gene029137:CDS 65.0%
CTAGTAAGCGGCACAGGGCG+AGG - chr1.2:85241115-85241134 None:intergenic 65.0%
TCGTGCTCCCTCTGCAGCCA+CGG + chr1.2:85245631-85245650 MS.gene029137:CDS 65.0%
! TAGCGGTGGCGGTCTACCAG+TGG + chr1.2:85241906-85241925 MS.gene029137:CDS 65.0%
!! CTCGCCCTGTGCCGCTTACT+AGG + chr1.2:85241113-85241132 MS.gene029137:CDS 65.0%
AGCGGCACAGGGCGAGGTAC+AGG - chr1.2:85241109-85241128 None:intergenic 70.0%
ATCGACCAACCAGGGGCGGG+AGG + chr1.2:85241989-85242008 MS.gene029137:CDS 70.0%
CCCTCTGCAGCCACGGCTAC+TGG + chr1.2:85245638-85245657 MS.gene029137:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 85240947 85245742 85240947 ID=MS.gene029137
chr1.2 mRNA 85240947 85245742 85240947 ID=MS.gene029137.t1;Parent=MS.gene029137
chr1.2 exon 85240947 85242503 85240947 ID=MS.gene029137.t1.exon1;Parent=MS.gene029137.t1
chr1.2 CDS 85240947 85242503 85240947 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85242599 85242825 85242599 ID=MS.gene029137.t1.exon2;Parent=MS.gene029137.t1
chr1.2 CDS 85242599 85242825 85242599 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85242907 85243239 85242907 ID=MS.gene029137.t1.exon3;Parent=MS.gene029137.t1
chr1.2 CDS 85242907 85243239 85242907 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85243634 85243880 85243634 ID=MS.gene029137.t1.exon4;Parent=MS.gene029137.t1
chr1.2 CDS 85243634 85243880 85243634 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85244188 85244316 85244188 ID=MS.gene029137.t1.exon5;Parent=MS.gene029137.t1
chr1.2 CDS 85244188 85244316 85244188 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85244411 85244626 85244411 ID=MS.gene029137.t1.exon6;Parent=MS.gene029137.t1
chr1.2 CDS 85244411 85244626 85244411 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85244752 85244875 85244752 ID=MS.gene029137.t1.exon7;Parent=MS.gene029137.t1
chr1.2 CDS 85244752 85244875 85244752 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
chr1.2 exon 85245504 85245742 85245504 ID=MS.gene029137.t1.exon8;Parent=MS.gene029137.t1
chr1.2 CDS 85245504 85245742 85245504 ID=cds.MS.gene029137.t1;Parent=MS.gene029137.t1
Gene Sequence

>MS.gene029137

ATGGGATGGTATAGAGCTGTTTCCGGCATAGCGAAGCATTCAATTAAAAGAAACCTCTATCGAAGTGGATCTTCATTTTATGCAATACGGACCACAATTGTTCCATCAACAAGTAGAAACTTTCAAACAACAGTTTTCAAATCCAAAGCACAAGCTGCACCTGTACCTCGCCCTGTGCCGCTTACTAGGCTTACCGACAATTTCTTAGATGGGACGAGCAGTGTCTATTTGGAGGAGCTTCAAAGAGCATGGGAAGCTGATCCAAACAGTGTAGACGAGTCTTGGGACAATTTCTTCAGGAACTTTGTGGGTCAGGCTTCCACCTCTCCGAGAATTTCAGGTCAAACGATTCAGGAGAGTATGCGATTGCTGTTACTTGTGAGAGCATACCAGGTTAATGGCCACATGAAAGCCAAGCTAGATCCTTTAGGTCTTGAAGAACGTAAAATCCCTGATGAGTTAAACCTGGCCCTTTATGGGTTCACCGAGGCTGATCTGGATAGAGAATTCTTTTTAGGGGTATGGAATATGTCTGGATTTTTGTCAGAGAATCGTCCGGTGCAGACCCTTAGGTCTATTTTGACACGGCTCGAGCAAGCTTATTGTGGAAGCATTGGGTACGAGTACATGCATATACCTGACCGTGACAAATGTAATTGGCTAAGGGAGAAGATTGAAACCCCTGCGGCCACACAATTCAGTCGGGAGCGTTGTGAGGTTATTTTTGATAGGCTTGCTTGGAGTACACTTTTTGAAAACTTCTTGGCCACCAAGTGGACATCAGCAAAGAGGTTTGGGCTTGAAGGGGGAGAGACTCTTATTCCTGGAATGAAAGAAATGTTTGACCGAGCATCTGATCTTGGAGTCGAGAACATAGTAATGGGAATGGCACATAGAGGAAGATTGAATGTTTTGGGTAATGTAGTTCGGAAGCCGATTCGTCAGATATTTTGCGAGTTTAGCGGTGGCGGTCTACCAGTGGATGAAGTCGGGCTCTATACAGGAACTGGTGATGTTAAATATCACTTGGGAACTTCTTATGATCGACCAACCAGGGGCGGGAGGAGAATACATTTGTCTTTGGTGGCAAATCCTAGTCACTTGGAAGCAGTAAACCCACTTGTTGTTGGAAAAACTCGAGCGAAGCAGTATTACTCAAATGATGCTGAAAGAATGAAAAACATGGGCGTTTTGATTCACGGAGATGGCAGTTTTGCCGGACAAGGCGTAGTTTATGAAACTCTTCATCTTAGTGCTCTTCCAAATTATACTACAGGTGGGACTATACACATCGTGTTCAACAATCAAGTTGCGTTTACAACTGATCCCAAGTCAGGCAGATCTTCGCAATATTCCACTGATGTTGCCAAAGCCTTAAACGCTCCCATATTTCATGTCAATGGTGATGACGTGGAAGCAGTTGTCCATGTATGTGAACTTGCTGCTGAGTGGCGTCAGACTTTCCATTCAGATGTGGTTGTCGACTTAGTATGTTACCGTCGATTTGGCCATAATGAGATTGATGAACCTTCTTTCACACAGCCTAAAATGTATAAGGTTGGCCCTTTTGTTTATTATTCTCTTATTCTTTAAATATGGATATTTCTTTTTCACAAGTTAATCAGATTTTAAACTTTCTTGGCTATGTATAGGTCATCCGAAACCATCCATCAGCTCTTGAGATTTATCAGAAGAAACTTTTGGAATTAGGGGAGTTAACTAAAGAAGACATTGAGAAGATACACAAGAAGGTCACATCAATTCTAAATGATGAATTTTTGGCCAGCAAAGATTATCTTCCAGACAGAAGAGATTGGCTTTCAGCATATTGGTCTGGTTTTAAGTCACCTGAGCAGCTTTCACGTATCCGTAACACTGGGTATAGTACATTGATGTTAACGTTGCATTAGTCTTTTTGTTGTTTGTAAAACAGCTGAAATCTATGATCAATCTTGTGCAGGGTGAAGCCGGAGATTTTGAAAAATGTTGGGAAGGCAATCACAGTCTTACCTGAAAACCTTACTCCTCACAAAGCAGTGAAGAGGATTTATGAACAGCGTGCCCAAATGATCGAGACAGGGGAAGATATTGACTGGGGTTTTGCAGAGGCACTTGCTTTCGCCACATTGATAGTTGAAGGTAACCATGTTCGTTTAAGTGGCCAGGACGTTGAAAGAGGAACGTTTAGTCACCGCCATGCTGTAGTTCATGATCAGACAAATGGGGAGAAATATTGCCCCCTTGACCATGTGATAATGAACCAGAACGAAGAGATGTTTACTGTTAGCAATAGGTAATTTTCTTCCACATGTGTATGTAATGGTATTAAGAAAATAAACCAGGTTTACAATGTTACTTTTCTGATTTTTTTATTCATGCAGCTTAAGCTTCTGAAACTTAGAATTCATAACTGGCTTAAGTGATCGTCAATGTTGCTAAGCCTAGCTAAATTTTAATTTGTCGCATGATTTGTAGTGAAATTTAATGTTTGTAGTACCCTGTTCAAAATATATGATCCATTTACTTACTAAGTATCATTGCTATGAATTATGATACGTGCCTTTATGTTGATTACTGTTGGATTTCATTTCTCATAATATATTTATAACACTTGATGGTTATGTTGAAGTAATGATAGATTTTTCATTTTGGTCTCATAACCAAGTAATAATTGATACGCTATGCAGCTCACTTTCTGAGTTTGGTGTTCTTGGATTTGAATTGGGTTACTCAATGGAAAATCCTAATTCATTGGTGATCTGGGAGGCACAATTTGGTGATTTTGCGAATGGTGCTCAAGTCATATTTGACAATTTCCTGAGCTGTGGTGAGTCTAAGTGGCTGCGTCAGGCCGGGCTCGTTGTGTTACTTCCACATGGTTATGATGGCCAGGGCCCAGAGCATTCAAGTGGGAGATTGGAACGCTTTCTTCAGGTTCTCTATTTGTGAATCTATGTTCTTATTTCCTTGAAACTTCTCTGAAGCATTTATTCTTTCTGCATGAATCTGGTTGCCAATTATGGTCTACTTTGTGATCGACATACAACCTTGAACTAAAAGAATTTTTTTGGAGGTCAGATTTAGGATGGTGGTATTTTTAGTGCACACAAAAAATTAATTTAAATAATTGTCTCTTGTTGCTTCCTTTGGAAGATGTTTTGTCTTTCTGCATGTACATCCTTCATCTTTCAATGATATTCATTAGATAAATTGAACTGTGTGTCTACTGAATTATTTACAGATGGCTGATGACCATCCTTATATTATTCCTGAGATGGATCCTACTCTTCGGAAACAAATTCAGGAATGTAATTGGCAGATTGTGAATGTTACAACTCCAGCAAATTTTTTCCATGTTTTACGGCGACAGGTTCGTAGTTGGTACAATAATTGATAAATGTTAGCTTTGTCACTTGAAGTTATATTATCTAATTTTCTTATTTTTGTTTTTTGTTTTATCGCAGATACATAGAGAATTCCGTAAACCTCTCATTGTAATGTCCCCTAAGAACCTGCTTCGCAGTAAGGCTTGCAGATCAAATTTATCTGAGTTTGATGATGTCCAAGGACACCCTGGTTTTGACAAACAAGGAACCAGATTTAAGCGCCTCATAAAAGACCAAAATAATCACTCAAATGTTGAGGAGGGTATCAGGCGTCTAATACTATGTTCTGGAAAGGTTTGTGACCCTCATTCAAACTGACTGTTCATCTAGTGGTTTTCATCTTAACCATATTTCCGAACATTACTCATTGCTTTGACTGTTTTCTAAATATGCTTTTTATGATTGTCAATGTCTTATAGGTTTATTACGAACTTGATGATCAACGAACAAAGGTAGATGCAAAGGATGTTGCAATATGTAGGGTGGAACAACTTTGTCCTTTCCCTTATGACCTTGTCCAACGAGAGCTTAAACGATATCCAAGTATGTCTGTTCAAAACTCTCTTTAGAATGGGATTCTGATTTTTTTATTGCATGTTGAGGTTTGATTATGACATATTGTATGCCTGTTGCCGTTAATAGTGTGGAAACTAGTTCTTGTTTGTGTCTTCTCTGCTTGACATTTAATTTCAATTTTTGCCCTATGATATTGTTGCATCTTTAACTTATCAATTTAGTAAGAAGATCAGCCATATCGACGATAGTTTCTTTTTTGCTATCAAAGCAAGAGTAATAAATTGGAGTTCTAATCTCTGCTTGTTAGTTGGGAGGATTCAAAATCAAAAGTATCTAGTTTTCTCTTCGATAAAAAGATTTTTTTAGCTCCTACCACTACCAGAAAAAATGTTATTGAAATTACTTTGAATTCTTACGGTAATAGATTTCTAAATGTCAAAAAATGTGGACAAAAGCCAAAGTCAATTCATTAGAGATTTCTAAATGTAGGAAAGCTTTGGACTTTGATGTGTGTGAATGTGTGAACTAGTTAGTATACGTAGAACATGACTTAATCATCATTAAATTTTGGGTTAAGCCTTATAAATATTGAATTGCAGGATATTAATCATTTTAAGTCTTTTGTGCTAAACATTTTACTTTTTTTGTGCTATAGTTGCAGAGGTTGTTTGGTGTCAAGAAGAGCCAATGAACATGGGTGGATACACATACGTTTTACCACGGCTTATAACTTCCATGAAGTCTTTAGGTAGGGGAGGTTATGATGATGTTAAATATGTCGGTCGTGCTCCCTCTGCAGCCACGGCTACTGGTTTCCTCAAGGTTCACCAGAAGGAGCAAACTGAGCTAGTTGAGAAAGCCCTTCAAAGTGAACCTATCAATTTCCCTTACTAA
Protein sequence

>MS.gene029137.t1

MGWYRAVSGIAKHSIKRNLYRSGSSFYAIRTTIVPSTSRNFQTTVFKSKAQAAPVPRPVPLTRLTDNFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQASTSPRISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEERKIPDELNLALYGFTEADLDREFFLGVWNMSGFLSENRPVQTLRSILTRLEQAYCGSIGYEYMHIPDRDKCNWLREKIETPAATQFSRERCEVIFDRLAWSTLFENFLATKWTSAKRFGLEGGETLIPGMKEMFDRASDLGVENIVMGMAHRGRLNVLGNVVRKPIRQIFCEFSGGGLPVDEVGLYTGTGDVKYHLGTSYDRPTRGGRRIHLSLVANPSHLEAVNPLVVGKTRAKQYYSNDAERMKNMGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVFNNQVAFTTDPKSGRSSQYSTDVAKALNAPIFHVNGDDVEAVVHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIRNHPSALEIYQKKLLELGELTKEDIEKIHKKVTSILNDEFLASKDYLPDRRDWLSAYWSGFKSPEQLSRIRNTGVKPEILKNVGKAITVLPENLTPHKAVKRIYEQRAQMIETGEDIDWGFAEALAFATLIVEGNHVRLSGQDVERGTFSHRHAVVHDQTNGEKYCPLDHVIMNQNEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVIFDNFLSCGESKWLRQAGLVVLLPHGYDGQGPEHSSGRLERFLQMADDHPYIIPEMDPTLRKQIQECNWQIVNVTTPANFFHVLRRQIHREFRKPLIVMSPKNLLRSKACRSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNNHSNVEEGIRRLILCSGKVYYELDDQRTKVDAKDVAICRVEQLCPFPYDLVQRELKRYPIAEVVWCQEEPMNMGGYTYVLPRLITSMKSLGRGGYDDVKYVGRAPSAATATGFLKVHQKEQTELVEKALQSEPINFPY