Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24619.t1 | XP_003590469.1 | 99.7 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 9.10E-202 | 712.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24619.t1 | Q945K7 | 81.7 | 372 | 54 | 1 | 1 | 358 | 3 | 374 | 4.9e-172 | 605.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24619.t1 | G7IAA3 | 99.7 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 6.6e-202 | 712.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055904 | MS.gene24619 | 0.946981 | 1.63E-105 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24619.t1 | MTR_1g064070 | 99.721 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 0.0 | 739 |
| MS.gene24619.t1 | MTR_3g101470 | 91.899 | 358 | 24 | 1 | 1 | 358 | 1 | 353 | 0.0 | 680 |
| MS.gene24619.t1 | MTR_8g074030 | 52.035 | 344 | 155 | 4 | 18 | 358 | 34 | 370 | 1.07e-119 | 350 |
| MS.gene24619.t1 | MTR_5g023740 | 48.634 | 366 | 174 | 4 | 2 | 358 | 6 | 366 | 6.44e-119 | 348 |
| MS.gene24619.t1 | MTR_8g074030 | 51.163 | 344 | 154 | 5 | 18 | 358 | 34 | 366 | 1.18e-115 | 340 |
| MS.gene24619.t1 | MTR_5g023740 | 48.087 | 366 | 172 | 5 | 2 | 358 | 6 | 362 | 6.38e-115 | 338 |
| MS.gene24619.t1 | MTR_5g023740 | 49.141 | 291 | 131 | 4 | 2 | 286 | 6 | 285 | 3.45e-96 | 288 |
| MS.gene24619.t1 | MTR_5g023740 | 50.545 | 275 | 125 | 3 | 2 | 270 | 6 | 275 | 7.01e-96 | 287 |
| MS.gene24619.t1 | MTR_5g023740 | 49.818 | 275 | 123 | 4 | 2 | 270 | 6 | 271 | 8.32e-92 | 276 |
| MS.gene24619.t1 | MTR_2g104610 | 31.953 | 338 | 200 | 10 | 29 | 341 | 42 | 374 | 1.23e-42 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24619.t1 | AT5G03290 | 81.720 | 372 | 54 | 1 | 1 | 358 | 3 | 374 | 0.0 | 625 |
| MS.gene24619.t1 | AT3G09810 | 83.478 | 345 | 57 | 0 | 14 | 358 | 30 | 374 | 0.0 | 609 |
| MS.gene24619.t1 | AT4G35260 | 50.581 | 344 | 162 | 2 | 18 | 358 | 28 | 366 | 1.04e-117 | 345 |
| MS.gene24619.t1 | AT2G17130 | 48.991 | 347 | 163 | 4 | 18 | 358 | 28 | 366 | 2.03e-112 | 332 |
| MS.gene24619.t1 | AT4G35650 | 49.419 | 344 | 166 | 3 | 18 | 358 | 29 | 367 | 3.22e-111 | 329 |
| MS.gene24619.t1 | AT2G17130 | 48.415 | 347 | 161 | 6 | 18 | 358 | 28 | 362 | 1.38e-108 | 322 |
| MS.gene24619.t1 | AT1G32480 | 42.534 | 221 | 114 | 4 | 34 | 252 | 4 | 213 | 1.87e-56 | 183 |
| MS.gene24619.t1 | AT5G14200 | 30.838 | 334 | 205 | 9 | 31 | 341 | 50 | 380 | 1.43e-42 | 152 |
| MS.gene24619.t1 | AT5G14200 | 30.838 | 334 | 205 | 9 | 31 | 341 | 50 | 380 | 1.94e-42 | 152 |
| MS.gene24619.t1 | AT1G31180 | 29.775 | 356 | 220 | 10 | 13 | 341 | 25 | 377 | 2.12e-42 | 152 |
| MS.gene24619.t1 | AT1G31180 | 29.775 | 356 | 220 | 10 | 13 | 341 | 40 | 392 | 3.68e-42 | 152 |
| MS.gene24619.t1 | AT1G80560 | 29.794 | 339 | 202 | 9 | 31 | 341 | 46 | 376 | 3.02e-40 | 147 |
| MS.gene24619.t1 | AT5G14200 | 25.974 | 231 | 147 | 7 | 31 | 239 | 50 | 278 | 6.09e-13 | 68.9 |
Find 93 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACCTTGCTACAGCCTTAA+TGG | 0.178931 | 1.2:-48948128 | MS.gene24619:CDS |
| ACCTCTGTGCTGGCTTGATT+GGG | 0.204671 | 1.2:-48947447 | MS.gene24619:CDS |
| GACCTCTGTGCTGGCTTGAT+TGG | 0.229295 | 1.2:-48947448 | MS.gene24619:CDS |
| TTGACAGAATCGGCGATTTC+GGG | 0.246225 | 1.2:+48949556 | None:intergenic |
| TTTGACAGAATCGGCGATTT+CGG | 0.250060 | 1.2:+48949555 | None:intergenic |
| GTCAGAAAGCTCTTTGTTCT+AGG | 0.256069 | 1.2:+48948281 | None:intergenic |
| TTACACGTCAAGCTAGTATA+AGG | 0.303608 | 1.2:-48947908 | MS.gene24619:CDS |
| TGTCTCAATGTTGCGCCATT+TGG | 0.311641 | 1.2:-48943618 | MS.gene24619:CDS |
| CGGAATAAGGTTGGCTTGAA+AGG | 0.360215 | 1.2:-48948233 | MS.gene24619:CDS |
| CTCACCTTTCCAGCAATATC+AGG | 0.370328 | 1.2:+48947257 | None:intergenic |
| AGAATCGGTTAGGCGGAATA+AGG | 0.372075 | 1.2:-48948246 | MS.gene24619:CDS |
| TCTCTTTCTTCCATGTTCCT+TGG | 0.407655 | 1.2:+48947860 | None:intergenic |
| CTCTGTGCTGGCTTGATTGG+GGG | 0.437503 | 1.2:-48947445 | MS.gene24619:CDS |
| GGTTCAGCACCTGATATTGC+TGG | 0.442057 | 1.2:-48947266 | MS.gene24619:CDS |
| TTCAGCAATTGTGTTAAGAA+TGG | 0.446588 | 1.2:+48943562 | None:intergenic |
| ATGGCCACCCCTATCGGTAA+AGG | 0.450045 | 1.2:-48948206 | MS.gene24619:CDS |
| GGCGCGGATCGGAGTGGAAT+CGG | 0.453688 | 1.2:+48949606 | None:intergenic |
| CCTCTGTGCTGGCTTGATTG+GGG | 0.463943 | 1.2:-48947446 | MS.gene24619:CDS |
| CTGCTGATGCACAAATAGAA+TGG | 0.464162 | 1.2:-48948334 | MS.gene24619:CDS |
| CCATAGCTTGTGAAGAATCC+TGG | 0.468996 | 1.2:-48947520 | MS.gene24619:intron |
| TTGGTGATGCCTAATCTTTA+CGG | 0.469141 | 1.2:-48947484 | MS.gene24619:CDS |
| AATCGCCGATTCTGTCAAAC+AGG | 0.472954 | 1.2:-48949551 | MS.gene24619:intron |
| TCTGTGCTGGCTTGATTGGG+GGG | 0.474277 | 1.2:-48947444 | MS.gene24619:CDS |
| GACATGGGAAAGTTTAGAAT+CGG | 0.478701 | 1.2:-48948261 | MS.gene24619:CDS |
| TGGCCACCCCTATCGGTAAA+GGG | 0.479393 | 1.2:-48948205 | MS.gene24619:CDS |
| TGCTGATGCACAAATAGAAT+GGG | 0.483323 | 1.2:-48948333 | MS.gene24619:CDS |
| AACGATGCCCTTTACCGATA+GGG | 0.490915 | 1.2:+48948198 | None:intergenic |
| GGGAAAGTTTAGAATCGGTT+AGG | 0.495200 | 1.2:-48948256 | MS.gene24619:CDS |
| GGGCCAATGGCCACCCCTAT+CGG | 0.496960 | 1.2:-48948212 | MS.gene24619:CDS |
| AATACCGAAGGCGAGTATAG+TGG | 0.498637 | 1.2:-48948059 | MS.gene24619:CDS |
| TTACCGATAGGGGTGGCCAT+TGG | 0.498964 | 1.2:+48948209 | None:intergenic |
| GCACTTGCTGAGGCTGTACA+TGG | 0.499237 | 1.2:-48947287 | MS.gene24619:CDS |
| GAATGGGAAGAGCATTATGT+AGG | 0.499589 | 1.2:-48948317 | MS.gene24619:CDS |
| ACGAACCTGTTTGACAGAAT+CGG | 0.506762 | 1.2:+48949546 | None:intergenic |
| AAGTACCGAACTGCTGATCT+TGG | 0.507542 | 1.2:-48943536 | MS.gene24619:CDS |
| CTTTGTCATGGAGATCCAAA+TGG | 0.508562 | 1.2:+48943603 | None:intergenic |
| ACTTCCTCATACACTATCTC+AGG | 0.511480 | 1.2:+48947663 | None:intergenic |
| TCAGAAAGCTCTTTGTTCTA+GGG | 0.512067 | 1.2:+48948282 | None:intergenic |
| CTATTTGTGCATCAGCAGCT+TGG | 0.514272 | 1.2:+48948339 | None:intergenic |
| CATTGACAATTGCTGTATGA+TGG | 0.519185 | 1.2:-48947637 | MS.gene24619:intron |
| GTATAGTGGACTTGAACATC+AGG | 0.526249 | 1.2:-48948045 | MS.gene24619:intron |
| ATATCCTGAGATAGTGTATG+AGG | 0.527921 | 1.2:-48947667 | MS.gene24619:CDS |
| TGCAGCCTCAACATTGGTGA+GGG | 0.528347 | 1.2:-48947317 | MS.gene24619:intron |
| TACACGTCAAGCTAGTATAA+GGG | 0.530954 | 1.2:-48947907 | MS.gene24619:CDS |
| GGAATAAGGTTGGCTTGAAA+GGG | 0.532355 | 1.2:-48948232 | MS.gene24619:CDS |
| TTTCACTACGCCAAGGAACA+TGG | 0.535570 | 1.2:-48947870 | MS.gene24619:CDS |
| TCGGTTAGGCGGAATAAGGT+TGG | 0.541684 | 1.2:-48948242 | MS.gene24619:CDS |
| AACAAAGAGCTTTCTGACAT+GGG | 0.543341 | 1.2:-48948276 | MS.gene24619:CDS |
| ATAATCAGTGACCTCTGTGC+TGG | 0.544154 | 1.2:-48947457 | MS.gene24619:CDS |
| GAGCTCAGCAGCAAAGCTGT+TGG | 0.544179 | 1.2:+48943641 | None:intergenic |
| TTCGGGACCGATACCATCGC+CGG | 0.544895 | 1.2:+48949573 | None:intergenic |
| GAATCCGATCCGCTTTGTCA+TGG | 0.545293 | 1.2:+48943591 | None:intergenic |
| ATTATATCACCGTAAAGATT+AGG | 0.545467 | 1.2:+48947475 | None:intergenic |
| ATTCTTAACACAATTGCTGA+AGG | 0.547614 | 1.2:-48943560 | MS.gene24619:CDS |
| TCGGGACCGATACCATCGCC+GGG | 0.548928 | 1.2:+48949574 | None:intergenic |
| TACCGAACTGCTGATCTTGG+TGG | 0.549369 | 1.2:-48943533 | MS.gene24619:CDS |
| AAGTCCACTATACTCGCCTT+CGG | 0.550678 | 1.2:+48948055 | None:intergenic |
| GGGAAAAGAGTGGCGCGGAT+CGG | 0.552555 | 1.2:+48949595 | None:intergenic |
| AGCACCTGATATTGCTGGAA+AGG | 0.552746 | 1.2:-48947261 | MS.gene24619:intron |
| GAACAAAGAGCTTTCTGACA+TGG | 0.555879 | 1.2:-48948277 | MS.gene24619:CDS |
| TGCCACCAAGATCAGCAGTT+CGG | 0.556271 | 1.2:+48943531 | None:intergenic |
| CAGATCCTCAGAAGAACACT+CGG | 0.561691 | 1.2:-48949664 | MS.gene24619:CDS |
| GTCTGTGGTTTGCGAAATAG+CGG | 0.565447 | 1.2:+48949638 | None:intergenic |
| AACATTATGCAAAAGACTGA+TGG | 0.584659 | 1.2:-48947816 | MS.gene24619:CDS |
| GAACGATGCCCTTTACCGAT+AGG | 0.585920 | 1.2:+48948197 | None:intergenic |
| AATGGGAAGAGCATTATGTA+GGG | 0.586731 | 1.2:-48948316 | MS.gene24619:CDS |
| GGCTTCCGAGTGTTCTTCTG+AGG | 0.587678 | 1.2:+48949659 | None:intergenic |
| TTGCAGCCTCAACATTGGTG+AGG | 0.595052 | 1.2:-48947318 | MS.gene24619:intron |
| ATCTCCATGACAAAGCGGAT+CGG | 0.597944 | 1.2:-48943595 | MS.gene24619:CDS |
| TTTGGGTTACAGGTTGTGAG+GGG | 0.598673 | 1.2:-48947954 | MS.gene24619:intron |
| GGGAGGTATTGCACTTGCTG+AGG | 0.602788 | 1.2:-48947297 | MS.gene24619:CDS |
| GGTTGGCTTGAAAGGGCCAA+TGG | 0.604612 | 1.2:-48948225 | MS.gene24619:CDS |
| AGCCTCAACATTGGTGAGGG+AGG | 0.610365 | 1.2:-48947314 | MS.gene24619:CDS |
| ACGATGCCCTTTACCGATAG+GGG | 0.614779 | 1.2:+48948199 | None:intergenic |
| TACCTCCCTCACCAATGTTG+AGG | 0.618003 | 1.2:+48947312 | None:intergenic |
| TTCTTAACACAATTGCTGAA+GGG | 0.618710 | 1.2:-48943559 | MS.gene24619:CDS |
| GCTGTAGCAAGGTCGAACAT+TGG | 0.627515 | 1.2:+48948136 | None:intergenic |
| GGAGTGGAATCGGAAGAGAA+AGG | 0.628474 | 1.2:+48949616 | None:intergenic |
| AAAGTTTAGAATCGGTTAGG+CGG | 0.637872 | 1.2:-48948253 | MS.gene24619:CDS |
| AAGAGTGGCGCGGATCGGAG+TGG | 0.641212 | 1.2:+48949600 | None:intergenic |
| TATCCATTAAGGCTGTAGCA+AGG | 0.643076 | 1.2:+48948125 | None:intergenic |
| ACCATCGCCGGGGAAAAGAG+TGG | 0.644691 | 1.2:+48949585 | None:intergenic |
| CGCCGGGGAAAAGAGTGGCG+CGG | 0.660910 | 1.2:+48949590 | None:intergenic |
| ATGCCCTTTACCGATAGGGG+TGG | 0.670871 | 1.2:+48948202 | None:intergenic |
| ACAATCCGTGAAAATACCGA+AGG | 0.679482 | 1.2:-48948071 | MS.gene24619:CDS |
| GATATTTCTCTGCAACCTCG+CGG | 0.680379 | 1.2:+48947685 | None:intergenic |
| TGGTGGCAGTTCAAAGACAA+CGG | 0.682693 | 1.2:-48943516 | MS.gene24619:CDS |
| ACGTCAAGCTAGTATAAGGG+TGG | 0.700507 | 1.2:-48947904 | MS.gene24619:CDS |
| TTTGGATCTCCATGACAAAG+CGG | 0.721494 | 1.2:-48943600 | MS.gene24619:CDS |
| TTATGTTTAGTGTTGCCGCG+AGG | 0.727035 | 1.2:-48947700 | MS.gene24619:intron |
| AATCGGAAGAGAAAGGTCTG+TGG | 0.734444 | 1.2:+48949623 | None:intergenic |
| CGGGACCGATACCATCGCCG+GGG | 0.744899 | 1.2:+48949575 | None:intergenic |
| CCCCAATCAAGCCAGCACAG+AGG | 0.762091 | 1.2:+48947446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAAAATAAAAAAA+AGG | + | chr1.2:48948092-48948111 | None:intergenic | 0.0% |
| !! | AAATTATATTAATCACAATT+AGG | + | chr1.2:48945173-48945192 | None:intergenic | 10.0% |
| !! | AAAACTTTCTATTATGATTA+TGG | + | chr1.2:48948222-48948241 | None:intergenic | 15.0% |
| !! | AAAATTATGTGTAAGTTTAT+TGG | + | chr1.2:48946273-48946292 | None:intergenic | 15.0% |
| !! | ATTCTTATAAACAAGAAAAA+AGG | + | chr1.2:48945966-48945985 | None:intergenic | 15.0% |
| !! | TTAAAAACAAGTAGTTAAAA+AGG | + | chr1.2:48946975-48946994 | None:intergenic | 15.0% |
| !! | TTGAAATAGTAATAAACAAA+GGG | - | chr1.2:48946931-48946950 | MS.gene24619:intron | 15.0% |
| !!! | ATATTATACTTCTAGATTTT+GGG | + | chr1.2:48948354-48948373 | None:intergenic | 15.0% |
| !!! | ATTTTACTTTTTCATTTTGT+GGG | - | chr1.2:48946194-48946213 | MS.gene24619:intron | 15.0% |
| !!! | GTATTTTTATTTACTATTTG+TGG | - | chr1.2:48947030-48947049 | MS.gene24619:intron | 15.0% |
| !!! | TATATTATACTTCTAGATTT+TGG | + | chr1.2:48948355-48948374 | None:intergenic | 15.0% |
| !!! | TATTTTACTTTTTCATTTTG+TGG | - | chr1.2:48946193-48946212 | MS.gene24619:intron | 15.0% |
| !!! | TGATTAATTTTACTTTTGAA+CGG | - | chr1.2:48948808-48948827 | MS.gene24619:intron | 15.0% |
| !!! | TTCTTGTTTATAAGAATATA+TGG | - | chr1.2:48945969-48945988 | MS.gene24619:intron | 15.0% |
| !!! | TTTGAAATAGTAATAAACAA+AGG | - | chr1.2:48946930-48946949 | MS.gene24619:intron | 15.0% |
| !! | AAAAGCTTAAAAATTGAAAC+TGG | - | chr1.2:48944102-48944121 | MS.gene24619:intron | 20.0% |
| !! | AAAGAAAAGAAAAAAAACCT+TGG | + | chr1.2:48945751-48945770 | None:intergenic | 20.0% |
| !! | AAAGCTTAAAAATTGAAACT+GGG | - | chr1.2:48944103-48944122 | MS.gene24619:intron | 20.0% |
| !! | ACAGAATATAGATCTAAAAA+AGG | + | chr1.2:48949452-48949471 | None:intergenic | 20.0% |
| !! | AGAAATTAAATTGAGAACTA+TGG | - | chr1.2:48943857-48943876 | MS.gene24619:intron | 20.0% |
| !! | CAGAATATAGATCTAAAAAA+GGG | + | chr1.2:48949451-48949470 | None:intergenic | 20.0% |
| !! | CTTAGTAAAACTTAAGTTAT+TGG | + | chr1.2:48944219-48944238 | None:intergenic | 20.0% |
| !! | TGAAATAGTAATAAACAAAG+GGG | - | chr1.2:48946932-48946951 | MS.gene24619:intron | 20.0% |
| !! | TTTAAAAACTAAGTTTGTGT+TGG | + | chr1.2:48946350-48946369 | None:intergenic | 20.0% |
| !!! | AAAGTCTTTTTTCATGATTA+AGG | + | chr1.2:48949067-48949086 | None:intergenic | 20.0% |
| !!! | ATAATTTGTCTAGCAATTTT+GGG | - | chr1.2:48945186-48945205 | MS.gene24619:intron | 20.0% |
| !!! | TATAATTTGTCTAGCAATTT+TGG | - | chr1.2:48945185-48945204 | MS.gene24619:intron | 20.0% |
| !!! | TATCTAGTTTCTTTTAAGAT+TGG | - | chr1.2:48948897-48948916 | MS.gene24619:intron | 20.0% |
| !!! | TTCTTTTTCTTTTGAGTTTT+GGG | - | chr1.2:48945765-48945784 | MS.gene24619:intron | 20.0% |
| !!! | TTTCTTTTTCTTTTGAGTTT+TGG | - | chr1.2:48945764-48945783 | MS.gene24619:intron | 20.0% |
| ! | AAAATAAAAAAAAGGCAACC+CGG | + | chr1.2:48948084-48948103 | None:intergenic | 25.0% |
| ! | AAAATTGAGACTTTGTTGAT+AGG | + | chr1.2:48945401-48945420 | None:intergenic | 25.0% |
| ! | AAACTACGAAAGAAACTATT+AGG | - | chr1.2:48946706-48946725 | MS.gene24619:intron | 25.0% |
| ! | AAACTTCAAATACATGTCAA+AGG | + | chr1.2:48944636-48944655 | None:intergenic | 25.0% |
| ! | AAATCGCATGAAAAAGTAAA+GGG | + | chr1.2:48943642-48943661 | None:intergenic | 25.0% |
| ! | AACCAAATCCTATAAATTGT+AGG | - | chr1.2:48944386-48944405 | MS.gene24619:intron | 25.0% |
| ! | AAGATGTAACATATGTTGAA+TGG | + | chr1.2:48944483-48944502 | None:intergenic | 25.0% |
| ! | AATATAGATCTAAAAAAGGG+TGG | + | chr1.2:48949448-48949467 | None:intergenic | 25.0% |
| ! | ATCCTACAATTTATAGGATT+TGG | + | chr1.2:48944391-48944410 | None:intergenic | 25.0% |
| ! | ATTATATCACCGTAAAGATT+AGG | + | chr1.2:48945685-48945704 | None:intergenic | 25.0% |
| ! | CATATGAATAACTATCAAGA+AGG | - | chr1.2:48947405-48947424 | MS.gene24619:intron | 25.0% |
| ! | GATCCAAAATTAGATATAGA+CGG | + | chr1.2:48943680-48943699 | None:intergenic | 25.0% |
| ! | GTAAAAGAGATACCAATTAA+GGG | - | chr1.2:48947629-48947648 | MS.gene24619:intron | 25.0% |
| ! | TAAATCGCATGAAAAAGTAA+AGG | + | chr1.2:48943643-48943662 | None:intergenic | 25.0% |
| ! | TAACCTTAAAATCCCTTAAT+TGG | + | chr1.2:48947644-48947663 | None:intergenic | 25.0% |
| ! | TAATAATCTGTCAACAACTT+AGG | + | chr1.2:48947246-48947265 | None:intergenic | 25.0% |
| ! | TAATACCTACACTTAATAAG+TGG | - | chr1.2:48947289-48947308 | MS.gene24619:CDS | 25.0% |
| ! | TATAAGTAGGTTATCATGAA+AGG | - | chr1.2:48947909-48947928 | MS.gene24619:CDS | 25.0% |
| ! | TCTATATAGACTCTTACAAT+AGG | + | chr1.2:48946225-48946244 | None:intergenic | 25.0% |
| ! | TGTAAAAGAGATACCAATTA+AGG | - | chr1.2:48947628-48947647 | MS.gene24619:intron | 25.0% |
| ! | TTCCTATATAACTTTGATCA+GGG | - | chr1.2:48948140-48948159 | MS.gene24619:CDS | 25.0% |
| ! | TTCTATTTGCAAGATAAACT+AGG | - | chr1.2:48947158-48947177 | MS.gene24619:intron | 25.0% |
| ! | TTTCCTATATAACTTTGATC+AGG | - | chr1.2:48948139-48948158 | MS.gene24619:CDS | 25.0% |
| !! | AAACTATTAGGGAAATCTTT+TGG | - | chr1.2:48946050-48946069 | MS.gene24619:intron | 25.0% |
| !! | ACTTAAGTTTTACTAAGACA+TGG | - | chr1.2:48944222-48944241 | MS.gene24619:intron | 25.0% |
| !! | AGTTGAAGGGAAAATTTTAT+CGG | - | chr1.2:48946405-48946424 | MS.gene24619:intron | 25.0% |
| !! | ATACCAATTAAGGGATTTTA+AGG | - | chr1.2:48947638-48947657 | MS.gene24619:CDS | 25.0% |
| !! | ATTAATCATTAGGTTGTCTA+CGG | - | chr1.2:48949141-48949160 | MS.gene24619:intron | 25.0% |
| !! | ATTCCGTCTATATCTAATTT+TGG | - | chr1.2:48943674-48943693 | MS.gene24619:intron | 25.0% |
| !! | TATTTCTTTTACGGAAGAAA+TGG | - | chr1.2:48949216-48949235 | MS.gene24619:intron | 25.0% |
| !! | TGTTTAACCAATTTTTCTGT+GGG | - | chr1.2:48949472-48949491 | MS.gene24619:intron | 25.0% |
| !! | TGTTTTCTTTATAACTGCAT+TGG | + | chr1.2:48949248-48949267 | None:intergenic | 25.0% |
| !! | TTGTTTAACCAATTTTTCTG+TGG | - | chr1.2:48949471-48949490 | MS.gene24619:intron | 25.0% |
| !! | TTTTGTATTTTCAAAACCAG+AGG | - | chr1.2:48943812-48943831 | MS.gene24619:intron | 25.0% |
| !!! | AAAAGGCATTTATAACTAAG+TGG | + | chr1.2:48947122-48947141 | None:intergenic | 25.0% |
| !!! | AAAGGCATTTATAACTAAGT+GGG | + | chr1.2:48947121-48947140 | None:intergenic | 25.0% |
| !!! | GTTTCTTTCGTAGTTTTTTA+AGG | + | chr1.2:48946702-48946721 | None:intergenic | 25.0% |
| !!! | TTGATACACTGGTTAATTTT+TGG | - | chr1.2:48945609-48945628 | MS.gene24619:intron | 25.0% |
| !!! | TTGATTATCCTTAGCTTTAA+GGG | + | chr1.2:48948464-48948483 | None:intergenic | 25.0% |
| AAAGAAACCAATCATAAGAG+AGG | + | chr1.2:48947863-48947882 | None:intergenic | 30.0% | |
| AAAGAAAGAAAAAACACACG+AGG | + | chr1.2:48948500-48948519 | None:intergenic | 30.0% | |
| AAATCATTAGAAACCCCAAA+CGG | + | chr1.2:48944570-48944589 | None:intergenic | 30.0% | |
| AACATTATGCAAAAGACTGA+TGG | - | chr1.2:48945341-48945360 | MS.gene24619:intron | 30.0% | |
| AAGAAAGAAAAAACACACGA+GGG | + | chr1.2:48948499-48948518 | None:intergenic | 30.0% | |
| AAGAATACCTCTCTTATGAT+TGG | - | chr1.2:48947853-48947872 | MS.gene24619:CDS | 30.0% | |
| ACACACAGCATAATGTTTAA+GGG | - | chr1.2:48944446-48944465 | MS.gene24619:intron | 30.0% | |
| ACATGGGATCATTAATCATT+AGG | - | chr1.2:48949131-48949150 | MS.gene24619:intron | 30.0% | |
| AGAAACCACTTATTAAGTGT+AGG | + | chr1.2:48947297-48947316 | None:intergenic | 30.0% | |
| AGGGATAGAATTAGAAATGA+CGG | - | chr1.2:48946511-48946530 | MS.gene24619:intron | 30.0% | |
| AGGTATTCTTGGATATATGT+AGG | + | chr1.2:48947843-48947862 | None:intergenic | 30.0% | |
| AGTTGACAATTAGAGACATA+TGG | - | chr1.2:48947515-48947534 | MS.gene24619:CDS | 30.0% | |
| ATAAAGTAAGCGTAACAGAA+GGG | - | chr1.2:48946492-48946511 | MS.gene24619:intron | 30.0% | |
| ATACATAACAAGAAACAACC+AGG | + | chr1.2:48944713-48944732 | None:intergenic | 30.0% | |
| ATTCTTAACACAATTGCTGA+AGG | - | chr1.2:48949597-48949616 | MS.gene24619:CDS | 30.0% | |
| ATTGTCAACTAATACTGCTA+TGG | + | chr1.2:48947505-48947524 | None:intergenic | 30.0% | |
| CATACTGTGTTAAAGTCATA+TGG | + | chr1.2:48948278-48948297 | None:intergenic | 30.0% | |
| CATGATAACCTACTTATAAG+CGG | + | chr1.2:48947907-48947926 | None:intergenic | 30.0% | |
| CATTGAAAACTGTTAACCTA+AGG | - | chr1.2:48943902-48943921 | MS.gene24619:intron | 30.0% | |
| CTTTGAATAGCTAATGATTG+TGG | - | chr1.2:48944014-48944033 | MS.gene24619:intron | 30.0% | |
| GAAGCATATCAATCATTAGT+CGG | + | chr1.2:48944687-48944706 | None:intergenic | 30.0% | |
| GTCGAAATCCTACAATTTAT+AGG | + | chr1.2:48944397-48944416 | None:intergenic | 30.0% | |
| TACACACAGCATAATGTTTA+AGG | - | chr1.2:48944445-48944464 | MS.gene24619:intron | 30.0% | |
| TACGAAAGAAACTATTAGGA+AGG | - | chr1.2:48946710-48946729 | MS.gene24619:intron | 30.0% | |
| TAGAAAAGATGGTAGAAACT+AGG | - | chr1.2:48946562-48946581 | MS.gene24619:intron | 30.0% | |
| TATAGACTCTTACAATAGGT+CGG | + | chr1.2:48946221-48946240 | None:intergenic | 30.0% | |
| TCACATATGCAATATCGAAA+GGG | + | chr1.2:48947735-48947754 | None:intergenic | 30.0% | |
| TCCTATATAACTTTGATCAG+GGG | - | chr1.2:48948141-48948160 | MS.gene24619:CDS | 30.0% | |
| TGAAAAATAGGCTAGACATT+TGG | - | chr1.2:48947191-48947210 | MS.gene24619:intron | 30.0% | |
| TTCAGCAATTGTGTTAAGAA+TGG | + | chr1.2:48949598-48949617 | None:intergenic | 30.0% | |
| TTCTTAACACAATTGCTGAA+GGG | - | chr1.2:48949598-48949617 | MS.gene24619:CDS | 30.0% | |
| TTGAATTACCGCTTATAAGT+AGG | - | chr1.2:48947896-48947915 | MS.gene24619:CDS | 30.0% | |
| TTGAGACTATAGATTGTCAA+GGG | + | chr1.2:48948775-48948794 | None:intergenic | 30.0% | |
| TTGCTGTATGATGGTAATAT+TGG | - | chr1.2:48945529-48945548 | MS.gene24619:intron | 30.0% | |
| TTTACACTATCTTTCCTGTA+TGG | + | chr1.2:48947614-48947633 | None:intergenic | 30.0% | |
| ! | AATTTTCCCTTCAACTTAAG+TGG | + | chr1.2:48946401-48946420 | None:intergenic | 30.0% |
| ! | ACTCATTATTTTCTACCGTT+TGG | - | chr1.2:48944552-48944571 | MS.gene24619:intron | 30.0% |
| ! | ATCAGTCTTTTGCATAATGT+TGG | + | chr1.2:48945342-48945361 | None:intergenic | 30.0% |
| ! | ATTGATATAAGTATTGCTGG+AGG | - | chr1.2:48944038-48944057 | MS.gene24619:intron | 30.0% |
| ! | ATTTGGCTTCTTATTATGTC+TGG | - | chr1.2:48947208-48947227 | MS.gene24619:intron | 30.0% |
| ! | ATTTTCAAAACCAGAGGAAA+TGG | - | chr1.2:48943818-48943837 | MS.gene24619:intron | 30.0% |
| ! | CTCAAATTTCGTCTTTCTTT+TGG | - | chr1.2:48944174-48944193 | MS.gene24619:intron | 30.0% |
| ! | CTCATTATTTTCTACCGTTT+GGG | - | chr1.2:48944553-48944572 | MS.gene24619:intron | 30.0% |
| ! | CTGTAGCAGTATTTCTTTTA+CGG | - | chr1.2:48949207-48949226 | MS.gene24619:intron | 30.0% |
| ! | GATTTCCTTGTTTGTACTAT+GGG | - | chr1.2:48944585-48944604 | MS.gene24619:intron | 30.0% |
| ! | GGTTTAGAACAAACAATACA+TGG | + | chr1.2:48945945-48945964 | None:intergenic | 30.0% |
| ! | GTGTTAAAGTCATATGGTTT+TGG | + | chr1.2:48948272-48948291 | None:intergenic | 30.0% |
| ! | TAAGCTCTTTTCTTAGAGTA+AGG | + | chr1.2:48944992-48945011 | None:intergenic | 30.0% |
| ! | TCATTATTTTCTACCGTTTG+GGG | - | chr1.2:48944554-48944573 | MS.gene24619:intron | 30.0% |
| ! | TGACTTTTGATAGAACACTA+TGG | - | chr1.2:48946763-48946782 | MS.gene24619:intron | 30.0% |
| ! | TGATTTCCTTGTTTGTACTA+TGG | - | chr1.2:48944584-48944603 | MS.gene24619:intron | 30.0% |
| ! | TTTCAGTTACCATCTGTTTT+GGG | - | chr1.2:48948581-48948600 | MS.gene24619:intron | 30.0% |
| ! | TTTGAGACTATAGATTGTCA+AGG | + | chr1.2:48948776-48948795 | None:intergenic | 30.0% |
| ! | TTTTCAGTTACCATCTGTTT+TGG | - | chr1.2:48948580-48948599 | MS.gene24619:intron | 30.0% |
| !! | AAAGTACCACTTAAGTTGAA+GGG | - | chr1.2:48946392-48946411 | MS.gene24619:intron | 30.0% |
| !! | AAATTTTAGAGACAGTGGTT+TGG | + | chr1.2:48948415-48948434 | None:intergenic | 30.0% |
| !! | AATCATAAGAGAGGTATTCT+TGG | + | chr1.2:48947854-48947873 | None:intergenic | 30.0% |
| !! | AATTTTAGAGACAGTGGTTT+GGG | + | chr1.2:48948414-48948433 | None:intergenic | 30.0% |
| !! | ACAAGCTTAGGCTTTTAAAA+AGG | + | chr1.2:48947139-48947158 | None:intergenic | 30.0% |
| !! | ATCGAGTTTTGTATCCATTA+AGG | + | chr1.2:48945046-48945065 | None:intergenic | 30.0% |
| !! | CTTGATTATCCTTAGCTTTA+AGG | + | chr1.2:48948465-48948484 | None:intergenic | 30.0% |
| !!! | ATAAGCCTTTTTAACTTCCT+AGG | - | chr1.2:48947089-48947108 | MS.gene24619:intron | 30.0% |
| !!! | GTGTGTTTTTTCTTTCTTTC+TGG | - | chr1.2:48948501-48948520 | MS.gene24619:intron | 30.0% |
| !!! | TCTTTTTTCATGATTAAGGC+AGG | + | chr1.2:48949063-48949082 | None:intergenic | 30.0% |
| AACAAAGAGCTTTCTGACAT+GGG | - | chr1.2:48944881-48944900 | MS.gene24619:intron | 35.0% | |
| AATATTGGTGAACTGGATGT+AGG | - | chr1.2:48945544-48945563 | MS.gene24619:intron | 35.0% | |
| AATTCAATGCTTACTGCTTC+TGG | - | chr1.2:48948670-48948689 | MS.gene24619:intron | 35.0% | |
| ACACCTGATGCTATCAAATA+GGG | + | chr1.2:48948986-48949005 | None:intergenic | 35.0% | |
| ACCAATACATCAAAAAGTCC+AGG | + | chr1.2:48945658-48945677 | None:intergenic | 35.0% | |
| ACCCCTGATCAAAGTTATAT+AGG | + | chr1.2:48948145-48948164 | None:intergenic | 35.0% | |
| ATATCCTGAGATAGTGTATG+AGG | - | chr1.2:48945490-48945509 | MS.gene24619:intron | 35.0% | |
| ATATGCAGAACTATGTGAGT+TGG | + | chr1.2:48947390-48947409 | None:intergenic | 35.0% | |
| ATATGCCCATAGTACAAACA+AGG | + | chr1.2:48944593-48944612 | None:intergenic | 35.0% | |
| CAAAGCCTAGGAAGTTAAAA+AGG | + | chr1.2:48947097-48947116 | None:intergenic | 35.0% | |
| CAAATTATGTCCATTTCCTC+TGG | + | chr1.2:48943831-48943850 | None:intergenic | 35.0% | |
| CATAAAGTAAGCGTAACAGA+AGG | - | chr1.2:48946491-48946510 | MS.gene24619:intron | 35.0% | |
| CATTGACAATTGCTGTATGA+TGG | - | chr1.2:48945520-48945539 | MS.gene24619:intron | 35.0% | |
| CGATATTGCATATGTGACTA+TGG | - | chr1.2:48947738-48947757 | MS.gene24619:intron | 35.0% | |
| CGGATTACAATCTTTCTCAT+GGG | - | chr1.2:48949400-48949419 | MS.gene24619:intron | 35.0% | |
| CGTAAAAGAAATACTGCTAC+AGG | + | chr1.2:48949209-48949228 | None:intergenic | 35.0% | |
| CTTGCAAATAGAACAAGCTT+AGG | + | chr1.2:48947151-48947170 | None:intergenic | 35.0% | |
| GATGTCAGATGATATAACTG+TGG | + | chr1.2:48945807-48945826 | None:intergenic | 35.0% | |
| GATTACAATCTTTCTCATGG+GGG | - | chr1.2:48949402-48949421 | MS.gene24619:intron | 35.0% | |
| GCATAAACCCACAGAAAAAT+TGG | + | chr1.2:48949482-48949501 | None:intergenic | 35.0% | |
| GCATAATGTTTAAGGGAGAA+AGG | - | chr1.2:48944453-48944472 | MS.gene24619:intron | 35.0% | |
| GCATGAAACAGAAACATAAC+AGG | - | chr1.2:48944352-48944371 | MS.gene24619:intron | 35.0% | |
| GGATCTAGAGATAAATGAGT+TGG | - | chr1.2:48946731-48946750 | MS.gene24619:intron | 35.0% | |
| GGATTACAATCTTTCTCATG+GGG | - | chr1.2:48949401-48949420 | MS.gene24619:intron | 35.0% | |
| GGCTTTGCAGAAATAGATAT+TGG | - | chr1.2:48946121-48946140 | MS.gene24619:intron | 35.0% | |
| GTCACATATGCAATATCGAA+AGG | + | chr1.2:48947736-48947755 | None:intergenic | 35.0% | |
| TAAGTCAGCTAAGCTAGATT+AGG | - | chr1.2:48946100-48946119 | MS.gene24619:intron | 35.0% | |
| TACACGTCAAGCTAGTATAA+GGG | - | chr1.2:48945250-48945269 | MS.gene24619:intron | 35.0% | |
| TAGATCTAAAAAAGGGTGGT+TGG | + | chr1.2:48949444-48949463 | None:intergenic | 35.0% | |
| TAGGTTATCATGAAAGGTCA+CGG | - | chr1.2:48947915-48947934 | MS.gene24619:CDS | 35.0% | |
| TAGTTTCCTCGTGAAAAGTA+AGG | - | chr1.2:48949354-48949373 | MS.gene24619:intron | 35.0% | |
| TCAGAAAGCTCTTTGTTCTA+GGG | + | chr1.2:48944878-48944897 | None:intergenic | 35.0% | |
| TGATCTACAAGATTAAGCAC+TGG | + | chr1.2:48949033-48949052 | None:intergenic | 35.0% | |
| TGATGGTAATATTGGTGAAC+TGG | - | chr1.2:48945537-48945556 | MS.gene24619:intron | 35.0% | |
| TGATTGATATGCTTCATTCC+TGG | - | chr1.2:48944692-48944711 | MS.gene24619:intron | 35.0% | |
| TGCATGTGAAATTGATACAC+TGG | - | chr1.2:48945598-48945617 | MS.gene24619:intron | 35.0% | |
| TGCTGATGCACAAATAGAAT+GGG | - | chr1.2:48944824-48944843 | MS.gene24619:intron | 35.0% | |
| TGTGGATTCTGTAGTAATGA+AGG | - | chr1.2:48946617-48946636 | MS.gene24619:intron | 35.0% | |
| TGTTTGTACTATGGGCATAT+TGG | - | chr1.2:48944593-48944612 | MS.gene24619:intron | 35.0% | |
| TTACACGTCAAGCTAGTATA+AGG | - | chr1.2:48945249-48945268 | MS.gene24619:intron | 35.0% | |
| TTCTCGGTATCAATAGAAAG+TGG | - | chr1.2:48943945-48943964 | MS.gene24619:intron | 35.0% | |
| ! | AAAGTTTAGAATCGGTTAGG+CGG | - | chr1.2:48944904-48944923 | MS.gene24619:intron | 35.0% |
| ! | AATGCCTTAAAAAGGGCATA+TGG | + | chr1.2:48946025-48946044 | None:intergenic | 35.0% |
| ! | ACGGATTACAATCTTTCTCA+TGG | - | chr1.2:48949399-48949418 | MS.gene24619:intron | 35.0% |
| ! | ATATTTTGCAGCCTCAACAT+TGG | - | chr1.2:48945834-48945853 | MS.gene24619:intron | 35.0% |
| ! | CTATTAGGGAAATCTTTTGG+CGG | - | chr1.2:48946053-48946072 | MS.gene24619:intron | 35.0% |
| ! | GACATGGGAAAGTTTAGAAT+CGG | - | chr1.2:48944896-48944915 | MS.gene24619:intron | 35.0% |
| ! | GCTGACTTACAACCTAAATT+AGG | + | chr1.2:48946089-48946108 | None:intergenic | 35.0% |
| ! | TACATGCTCCATGTTTTTCT+GGG | + | chr1.2:48944533-48944552 | None:intergenic | 35.0% |
| ! | TCCTGGACTTTTTGATGTAT+TGG | - | chr1.2:48945654-48945673 | MS.gene24619:intron | 35.0% |
| ! | TCTACCATCTTTTCTACAAG+AGG | + | chr1.2:48946558-48946577 | None:intergenic | 35.0% |
| ! | TGGTTTCTCTTTTGCATCTA+AGG | - | chr1.2:48947309-48947328 | MS.gene24619:CDS | 35.0% |
| ! | TTCACATTCCTTGATAGCAT+GGG | - | chr1.2:48948953-48948972 | MS.gene24619:intron | 35.0% |
| ! | TTTCACATTCCTTGATAGCA+TGG | - | chr1.2:48948952-48948971 | MS.gene24619:intron | 35.0% |
| ! | TTTCCCTATTTGATAGCATC+AGG | - | chr1.2:48948980-48948999 | MS.gene24619:intron | 35.0% |
| ! | TTTTCTCTTGTCTGTACTGT+AGG | - | chr1.2:48948383-48948402 | MS.gene24619:intron | 35.0% |
| !! | AACGGAAATTTTAGAGACAG+TGG | + | chr1.2:48948420-48948439 | None:intergenic | 35.0% |
| !! | AAGCATTGAATTCAAGTCTG+AGG | + | chr1.2:48948662-48948681 | None:intergenic | 35.0% |
| !! | AATGGGAAGAGCATTATGTA+GGG | - | chr1.2:48944841-48944860 | MS.gene24619:intron | 35.0% |
| !! | GAAAGTACCACTTAAGTTGA+AGG | - | chr1.2:48946391-48946410 | MS.gene24619:intron | 35.0% |
| !! | GGCATTGATATAAGTATTGC+TGG | - | chr1.2:48944035-48944054 | MS.gene24619:intron | 35.0% |
| !! | TTGGTGATGCCTAATCTTTA+CGG | - | chr1.2:48945673-48945692 | MS.gene24619:intron | 35.0% |
| !!! | AGTCATATGGTTTTGGATAG+TGG | + | chr1.2:48948265-48948284 | None:intergenic | 35.0% |
| !!! | ATATGCCCTTTTTAAGGCAT+TGG | - | chr1.2:48946024-48946043 | MS.gene24619:intron | 35.0% |
| !!! | CTTTTTAACTTCCTAGGCTT+TGG | - | chr1.2:48947095-48947114 | MS.gene24619:intron | 35.0% |
| !!! | TATGCCCTTTTTAAGGCATT+GGG | - | chr1.2:48946025-48946044 | MS.gene24619:intron | 35.0% |
| AAACTTTAGCATTGCCCTCA+GGG | - | chr1.2:48947053-48947072 | MS.gene24619:intron | 40.0% | |
| AAATGACGGCATTAGAGAGT+TGG | - | chr1.2:48946525-48946544 | MS.gene24619:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr1.2:48947986-48948005 | MS.gene24619:intron | 40.0% | |
| AACTCAGTCCCTTAAAGCTA+AGG | - | chr1.2:48948453-48948472 | MS.gene24619:intron | 40.0% | |
| AAGGTTTCCGTCTGTTTGTA+TGG | - | chr1.2:48943921-48943940 | MS.gene24619:intron | 40.0% | |
| AATGACGGCATTAGAGAGTT+GGG | - | chr1.2:48946526-48946545 | MS.gene24619:intron | 40.0% | |
| ACAATCCGTGAAAATACCGA+AGG | - | chr1.2:48945086-48945105 | MS.gene24619:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr1.2:48947987-48948006 | MS.gene24619:intron | 40.0% | |
| ACATGTAGAGAGAAGAACTG+TGG | - | chr1.2:48946599-48946618 | MS.gene24619:intron | 40.0% | |
| ACGAACCTGTTTGACAGAAT+CGG | + | chr1.2:48943614-48943633 | None:intergenic | 40.0% | |
| ACTTCCTCATACACTATCTC+AGG | + | chr1.2:48945497-48945516 | None:intergenic | 40.0% | |
| AGATGGTAGAAACTAGGCTT+AGG | - | chr1.2:48946568-48946587 | MS.gene24619:intron | 40.0% | |
| AGCACCTCTTGTAGAAAAGA+TGG | - | chr1.2:48946551-48946570 | MS.gene24619:intron | 40.0% | |
| AGGTTATCATGAAAGGTCAC+GGG | - | chr1.2:48947916-48947935 | MS.gene24619:CDS | 40.0% | |
| ATCTGTCAACAACTTAGGAG+AGG | + | chr1.2:48947241-48947260 | None:intergenic | 40.0% | |
| ATGTTGAAGACCAGAAGTTG+AGG | + | chr1.2:48949115-48949134 | None:intergenic | 40.0% | |
| CAACAGAAAAGCGATAGGAT+AGG | + | chr1.2:48948324-48948343 | None:intergenic | 40.0% | |
| CAAGCTACAAGAACAAACCA+GGG | + | chr1.2:48948720-48948739 | None:intergenic | 40.0% | |
| CAGAAACATAACAGGACACT+AGG | - | chr1.2:48944360-48944379 | MS.gene24619:intron | 40.0% | |
| CGAGAAACCATACAAACAGA+CGG | + | chr1.2:48943931-48943950 | None:intergenic | 40.0% | |
| CGCATGAAAAAGTAAAGGGA+AGG | + | chr1.2:48943638-48943657 | None:intergenic | 40.0% | |
| CGCTTACTTTATGTTCGTGT+TGG | + | chr1.2:48946484-48946503 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.2:48948018-48948037 | MS.gene24619:intron | 40.0% | |
| CGTCTGTTTGTATGGTTTCT+CGG | - | chr1.2:48943929-48943948 | MS.gene24619:intron | 40.0% | |
| CTCAACAACAGAAAAGCGAT+AGG | + | chr1.2:48948329-48948348 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr1.2:48947992-48948011 | MS.gene24619:intron | 40.0% | |
| CTGCTGATGCACAAATAGAA+TGG | - | chr1.2:48944823-48944842 | MS.gene24619:intron | 40.0% | |
| CTGTGGGTTTATGCAGAATT+TGG | - | chr1.2:48949488-48949507 | MS.gene24619:intron | 40.0% | |
| CTTTGTCATGGAGATCCAAA+TGG | + | chr1.2:48949557-48949576 | None:intergenic | 40.0% | |
| GAACAAAGAGCTTTCTGACA+TGG | - | chr1.2:48944880-48944899 | MS.gene24619:intron | 40.0% | |
| GACACCTGATGCTATCAAAT+AGG | + | chr1.2:48948987-48949006 | None:intergenic | 40.0% | |
| GATCTTGCAATAGCATTGCT+AGG | + | chr1.2:48944082-48944101 | None:intergenic | 40.0% | |
| GATTCTTCACAAGCTATGGA+TGG | + | chr1.2:48945636-48945655 | None:intergenic | 40.0% | |
| GCACGTATTAAAAGACCTTG+AGG | + | chr1.2:48945373-48945392 | None:intergenic | 40.0% | |
| GGCGAAGCTAAGTGAAAAAT+AGG | - | chr1.2:48947179-48947198 | MS.gene24619:intron | 40.0% | |
| GTCAGAAAGCTCTTTGTTCT+AGG | + | chr1.2:48944879-48944898 | None:intergenic | 40.0% | |
| GTTGTACGGGATAGATTGTT+GGG | - | chr1.2:48946448-48946467 | MS.gene24619:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1.2:48947943-48947962 | MS.gene24619:CDS | 40.0% | |
| TACAAACAGACGGAAACCTT+AGG | + | chr1.2:48943921-48943940 | None:intergenic | 40.0% | |
| TAGATCAGAGATCAGATGGA+GGG | - | chr1.2:48946642-48946661 | MS.gene24619:intron | 40.0% | |
| TATCCATTAAGGCTGTAGCA+AGG | + | chr1.2:48945035-48945054 | None:intergenic | 40.0% | |
| TCTACGGATAAGTGTAGTGT+TGG | - | chr1.2:48949157-48949176 | MS.gene24619:intron | 40.0% | |
| TCTCTTTCTTCCATGTTCCT+TGG | + | chr1.2:48945300-48945319 | None:intergenic | 40.0% | |
| TCTGTCAACAACTTAGGAGA+GGG | + | chr1.2:48947240-48947259 | None:intergenic | 40.0% | |
| TGATAGATAACAGCTAGCTC+AGG | + | chr1.2:48946167-48946186 | None:intergenic | 40.0% | |
| TGTTGAAGACCAGAAGTTGA+GGG | + | chr1.2:48949114-48949133 | None:intergenic | 40.0% | |
| TGTTGTACGGGATAGATTGT+TGG | - | chr1.2:48946447-48946466 | MS.gene24619:intron | 40.0% | |
| TTCGCCCAATGCCTTAAAAA+GGG | + | chr1.2:48946032-48946051 | None:intergenic | 40.0% | |
| TTTATCTTTCTCTCACTCCC+TGG | - | chr1.2:48948700-48948719 | MS.gene24619:intron | 40.0% | |
| TTTCGCCCAATGCCTTAAAA+AGG | + | chr1.2:48946033-48946052 | None:intergenic | 40.0% | |
| TTTGACAGAATCGGCGATTT+CGG | + | chr1.2:48943605-48943624 | None:intergenic | 40.0% | |
| TTTGGATCTCCATGACAAAG+CGG | - | chr1.2:48949557-48949576 | MS.gene24619:CDS | 40.0% | |
| ! | AATCTTTCTCATGGGGGTAT+AGG | - | chr1.2:48949408-48949427 | MS.gene24619:intron | 40.0% |
| ! | ACTTTTCACGAGGAAACTAG+TGG | + | chr1.2:48949353-48949372 | None:intergenic | 40.0% |
| ! | CAACTTCTGGTCTTCAACAT+GGG | - | chr1.2:48949115-48949134 | MS.gene24619:intron | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr1.2:48947994-48948013 | None:intergenic | 40.0% |
| ! | CTTTTCACGAGGAAACTAGT+GGG | + | chr1.2:48949352-48949371 | None:intergenic | 40.0% |
| ! | GGGAAAATTTTATCGGACAG+CGG | - | chr1.2:48946412-48946431 | MS.gene24619:intron | 40.0% |
| ! | GGGAAAGTTTAGAATCGGTT+AGG | - | chr1.2:48944901-48944920 | MS.gene24619:intron | 40.0% |
| ! | GTAAGGTTAGCTATGTGACT+TGG | - | chr1.2:48949371-48949390 | MS.gene24619:intron | 40.0% |
| ! | GTACATGCTCCATGTTTTTC+TGG | + | chr1.2:48944534-48944553 | None:intergenic | 40.0% |
| ! | TCAACTTCTGGTCTTCAACA+TGG | - | chr1.2:48949114-48949133 | MS.gene24619:intron | 40.0% |
| ! | TCACATTCCTTGATAGCATG+GGG | - | chr1.2:48948954-48948973 | MS.gene24619:intron | 40.0% |
| ! | TGTGACTATGGTGTCAACTT+TGG | - | chr1.2:48947750-48947769 | MS.gene24619:intron | 40.0% |
| ! | TTTAAGGGACTGAGTTCTGA+TGG | + | chr1.2:48948449-48948468 | None:intergenic | 40.0% |
| ! | TTTTCACGAGGAAACTAGTG+GGG | + | chr1.2:48949351-48949370 | None:intergenic | 40.0% |
| !! | AGCTAACCTTACTTTTCACG+AGG | + | chr1.2:48949363-48949382 | None:intergenic | 40.0% |
| !! | GAATGGGAAGAGCATTATGT+AGG | - | chr1.2:48944840-48944859 | MS.gene24619:intron | 40.0% |
| !! | GGAATAAGGTTGGCTTGAAA+GGG | - | chr1.2:48944925-48944944 | MS.gene24619:intron | 40.0% |
| !! | GTATAGTGGACTTGAACATC+AGG | - | chr1.2:48945112-48945131 | MS.gene24619:intron | 40.0% |
| !!! | AAGTTGAGGGGTTTTGGATA+AGG | + | chr1.2:48949101-48949120 | None:intergenic | 40.0% |
| !!! | AGGTGTCTTGTTTTAGTGTG+AGG | - | chr1.2:48949000-48949019 | MS.gene24619:intron | 40.0% |
| !!! | AGTTGAGGGGTTTTGGATAA+GGG | + | chr1.2:48949100-48949119 | None:intergenic | 40.0% |
| !!! | ATTTTGGGTTACAGGTTGTG+AGG | - | chr1.2:48945201-48945220 | MS.gene24619:intron | 40.0% |
| !!! | CATATGGTTTTGGATAGTGG+AGG | + | chr1.2:48948262-48948281 | None:intergenic | 40.0% |
| !!! | GTCTAGCAATTTTGGGTTAC+AGG | - | chr1.2:48945193-48945212 | MS.gene24619:intron | 40.0% |
| !!! | TTTTGGGTTACAGGTTGTGA+GGG | - | chr1.2:48945202-48945221 | MS.gene24619:intron | 40.0% |
| AACGATGCCCTTTACCGATA+GGG | + | chr1.2:48944962-48944981 | None:intergenic | 45.0% | |
| AACGTAACCTTGACGAGACA+TGG | - | chr1.2:48947578-48947597 | MS.gene24619:intron | 45.0% | |
| AAGTCCACTATACTCGCCTT+CGG | + | chr1.2:48945105-48945124 | None:intergenic | 45.0% | |
| AAGTCCCTCCCAGAAAAACA+TGG | - | chr1.2:48944522-48944541 | MS.gene24619:intron | 45.0% | |
| AATACCGAAGGCGAGTATAG+TGG | - | chr1.2:48945098-48945117 | MS.gene24619:intron | 45.0% | |
| AATCGGAAGAGAAAGGTCTG+TGG | + | chr1.2:48943537-48943556 | None:intergenic | 45.0% | |
| ACGTCAAGCTAGTATAAGGG+TGG | - | chr1.2:48945253-48945272 | MS.gene24619:intron | 45.0% | |
| AGAATCGGTTAGGCGGAATA+AGG | - | chr1.2:48944911-48944930 | MS.gene24619:intron | 45.0% | |
| AGATCAGAGATCAGATGGAG+GGG | - | chr1.2:48946643-48946662 | MS.gene24619:intron | 45.0% | |
| AGCACCTGATATTGCTGGAA+AGG | - | chr1.2:48945896-48945915 | MS.gene24619:intron | 45.0% | |
| AGTGACGATCCCAAAACAGA+TGG | + | chr1.2:48948593-48948612 | None:intergenic | 45.0% | |
| ATAATCAGTGACCTCTGTGC+TGG | - | chr1.2:48945700-48945719 | MS.gene24619:intron | 45.0% | |
| ATCCAAAACCCCTCAACTTC+TGG | - | chr1.2:48949102-48949121 | MS.gene24619:intron | 45.0% | |
| ATCTCCATGACAAAGCGGAT+CGG | - | chr1.2:48949562-48949581 | MS.gene24619:CDS | 45.0% | |
| ATCTCTATCCCTACCTCTAG+TGG | + | chr1.2:48946676-48946695 | None:intergenic | 45.0% | |
| ATGACGGCATTAGAGAGTTG+GGG | - | chr1.2:48946527-48946546 | MS.gene24619:intron | 45.0% | |
| ATGGAGATGACTGACCATAC+AGG | - | chr1.2:48947597-48947616 | MS.gene24619:intron | 45.0% | |
| ATGGCGCACAAGTACAAAAC+AGG | + | chr1.2:48946006-48946025 | None:intergenic | 45.0% | |
| CAGATCCTCAGAAGAACACT+CGG | - | chr1.2:48943493-48943512 | MS.gene24619:CDS | 45.0% | |
| CCAAGCTACAAGAACAAACC+AGG | + | chr1.2:48948721-48948740 | None:intergenic | 45.0% | |
| CCAAGTGTTATCCCACTAAG+TGG | + | chr1.2:48946814-48946833 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAACACT+TGG | - | chr1.2:48946811-48946830 | MS.gene24619:intron | 45.0% | |
| CCAGGATTCTTCACAAGCTA+TGG | + | chr1.2:48945640-48945659 | None:intergenic | 45.0% | |
| CTATTTGTGCATCAGCAGCT+TGG | + | chr1.2:48944821-48944840 | None:intergenic | 45.0% | |
| CTCACCTTTCCAGCAATATC+AGG | + | chr1.2:48945903-48945922 | None:intergenic | 45.0% | |
| GAAACAACCCCATGCTATCA+AGG | + | chr1.2:48948964-48948983 | None:intergenic | 45.0% | |
| GAAACTTTAGCATTGCCCTC+AGG | - | chr1.2:48947052-48947071 | MS.gene24619:intron | 45.0% | |
| GATATTTCTCTGCAACCTCG+CGG | + | chr1.2:48945475-48945494 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.2:48948017-48948036 | MS.gene24619:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.2:48948014-48948033 | MS.gene24619:intron | 45.0% | |
| GGAGTAGATCAGAGATCAGA+TGG | - | chr1.2:48946638-48946657 | MS.gene24619:intron | 45.0% | |
| GGCTGGTGCAATCCTAATTT+AGG | - | chr1.2:48946074-48946093 | MS.gene24619:intron | 45.0% | |
| GTAAGACCGACGATGTTGTA+CGG | - | chr1.2:48946434-48946453 | MS.gene24619:intron | 45.0% | |
| GTAGATCAGAGATCAGATGG+AGG | - | chr1.2:48946641-48946660 | MS.gene24619:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1.2:48947949-48947968 | MS.gene24619:intron | 45.0% | |
| GTTGAAGACCAGAAGTTGAG+GGG | + | chr1.2:48949113-48949132 | None:intergenic | 45.0% | |
| TAAGACCGACGATGTTGTAC+GGG | - | chr1.2:48946435-48946454 | MS.gene24619:intron | 45.0% | |
| TCAATCATTAGTCGGTGAGC+AGG | + | chr1.2:48944679-48944698 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr1.2:48947950-48947969 | MS.gene24619:intron | 45.0% | |
| TCTATCCCGTACAACATCGT+CGG | + | chr1.2:48946443-48946462 | None:intergenic | 45.0% | |
| TGATTTCTCGGAATGGCGAT+GGG | + | chr1.2:48948745-48948764 | None:intergenic | 45.0% | |
| TGGTAGAAACTAGGCTTAGG+TGG | - | chr1.2:48946571-48946590 | MS.gene24619:intron | 45.0% | |
| TGGTGGCAGTTCAAAGACAA+CGG | - | chr1.2:48949641-48949660 | MS.gene24619:CDS | 45.0% | |
| TGTCTCAATGTTGCGCCATT+TGG | - | chr1.2:48949539-48949558 | MS.gene24619:intron | 45.0% | |
| TGTGTGTGTGTGTGTGTGTT+AGG | + | chr1.2:48944419-48944438 | None:intergenic | 45.0% | |
| TTATGTTTAGTGTTGCCGCG+AGG | - | chr1.2:48945457-48945476 | MS.gene24619:intron | 45.0% | |
| TTGACAGAATCGGCGATTTC+GGG | + | chr1.2:48943604-48943623 | None:intergenic | 45.0% | |
| TTGCAATAGCATTGCTAGGC+AGG | + | chr1.2:48944078-48944097 | None:intergenic | 45.0% | |
| TTTCACTACGCCAAGGAACA+TGG | - | chr1.2:48945287-48945306 | MS.gene24619:intron | 45.0% | |
| TTTGCTAACATGTGCCCTGA+GGG | + | chr1.2:48947070-48947089 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1.2:48944291-48944310 | None:intergenic | 45.0% |
| ! | AAGGGTCCAAGCTGATTTCT+CGG | + | chr1.2:48948757-48948776 | None:intergenic | 45.0% |
| ! | ACTCGCCTTCGGTATTTTCA+CGG | + | chr1.2:48945094-48945113 | None:intergenic | 45.0% |
| ! | AGGTTAGCTATGTGACTTGG+TGG | - | chr1.2:48949374-48949393 | MS.gene24619:intron | 45.0% |
| ! | ATGCTCCATGTTTTTCTGGG+AGG | + | chr1.2:48944530-48944549 | None:intergenic | 45.0% |
| ! | ATTTGCTAACATGTGCCCTG+AGG | + | chr1.2:48947071-48947090 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1.2:48944292-48944311 | None:intergenic | 45.0% |
| ! | CCATAGCTTGTGAAGAATCC+TGG | - | chr1.2:48945637-48945656 | MS.gene24619:intron | 45.0% |
| ! | GACTATGGTGTCAACTTTGG+TGG | - | chr1.2:48947753-48947772 | MS.gene24619:intron | 45.0% |
| ! | GACTGATGGTCTTTTCCTCA+AGG | - | chr1.2:48945355-48945374 | MS.gene24619:intron | 45.0% |
| ! | GCAGAACTATGTGAGTTGGA+AGG | + | chr1.2:48947386-48947405 | None:intergenic | 45.0% |
| ! | GGCATTGGGCGAAACTATTA+GGG | - | chr1.2:48946039-48946058 | MS.gene24619:intron | 45.0% |
| ! | GTATGCTTTTCACTACGCCA+AGG | - | chr1.2:48945280-48945299 | MS.gene24619:intron | 45.0% |
| ! | GTCTGTGGTTTGCGAAATAG+CGG | + | chr1.2:48943522-48943541 | None:intergenic | 45.0% |
| ! | TCCAAGCTGATTTCTCGGAA+TGG | + | chr1.2:48948752-48948771 | None:intergenic | 45.0% |
| ! | TGCGCCATATGCCCTTTTTA+AGG | - | chr1.2:48946018-48946037 | MS.gene24619:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.2:48947983-48948002 | None:intergenic | 45.0% |
| ! | TTTGGGTTACAGGTTGTGAG+GGG | - | chr1.2:48945203-48945222 | MS.gene24619:intron | 45.0% |
| !! | AAGTACCGAACTGCTGATCT+TGG | - | chr1.2:48949621-48949640 | MS.gene24619:CDS | 45.0% |
| !! | AATCGCCGATTCTGTCAAAC+AGG | - | chr1.2:48943606-48943625 | MS.gene24619:CDS | 45.0% |
| !! | AGGCATTGGGCGAAACTATT+AGG | - | chr1.2:48946038-48946057 | MS.gene24619:intron | 45.0% |
| !! | AGTAAGCATTGAGAGCGTGT+TGG | - | chr1.2:48948854-48948873 | MS.gene24619:intron | 45.0% |
| !! | CCTGGTTTGTTCTTGTAGCT+TGG | - | chr1.2:48948718-48948737 | MS.gene24619:intron | 45.0% |
| !! | CGGAATAAGGTTGGCTTGAA+AGG | - | chr1.2:48944924-48944943 | MS.gene24619:intron | 45.0% |
| !! | TGCTCCATGTTTTTCTGGGA+GGG | + | chr1.2:48944529-48944548 | None:intergenic | 45.0% |
| !! | TAAAAATACAAATTAAAAAA+AGG | + | chr1.2:48947019-48947038 | None:intergenic | 5.0% |
| !! | TATTAATTACATATTATTAA+CGG | - | chr1.2:48947662-48947681 | MS.gene24619:CDS | 5.0% |
| !!! | TTTTTTTATTTTTTATAAGT+AGG | - | chr1.2:48948102-48948121 | MS.gene24619:CDS | 5.0% |
| AACTAAGTGGGCCAAAGCCT+AGG | + | chr1.2:48947109-48947128 | None:intergenic | 50.0% | |
| ACGATGCCCTTTACCGATAG+GGG | + | chr1.2:48944961-48944980 | None:intergenic | 50.0% | |
| ACTAGAGCTCACGCATATGC+AGG | + | chr1.2:48948058-48948077 | None:intergenic | 50.0% | |
| AGGCTGAAGTTTCGCAGAAC+AGG | + | chr1.2:48946147-48946166 | None:intergenic | 50.0% | |
| ATGTAACCGACGCCACTTAG+TGG | - | chr1.2:48946799-48946818 | MS.gene24619:intron | 50.0% | |
| CAAGTCTGAGGACCAAGAAG+TGG | + | chr1.2:48948650-48948669 | None:intergenic | 50.0% | |
| CAGCAACATCCATGCATGTC+TGG | - | chr1.2:48948545-48948564 | MS.gene24619:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1.2:48944290-48944309 | MS.gene24619:intron | 50.0% | |
| CGACCTTGCTACAGCCTTAA+TGG | - | chr1.2:48945029-48945048 | MS.gene24619:intron | 50.0% | |
| CGAGGAAACTAGTGGGGTAT+CGG | + | chr1.2:48949345-48949364 | None:intergenic | 50.0% | |
| CTAGAGCTCACGCATATGCA+GGG | + | chr1.2:48948057-48948076 | None:intergenic | 50.0% | |
| CTGATTTCTCGGAATGGCGA+TGG | + | chr1.2:48948746-48948765 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1.2:48944287-48944306 | None:intergenic | 50.0% | |
| GAACGATGCCCTTTACCGAT+AGG | + | chr1.2:48944963-48944982 | None:intergenic | 50.0% | |
| GAATCCGATCCGCTTTGTCA+TGG | + | chr1.2:48949569-48949588 | None:intergenic | 50.0% | |
| GACCAGACTATGTCCTTGCT+TGG | - | chr1.2:48948624-48948643 | MS.gene24619:intron | 50.0% | |
| GATTTCTCGGAATGGCGATG+GGG | + | chr1.2:48948744-48948763 | None:intergenic | 50.0% | |
| GCCATTCCGAGAAATCAGCT+TGG | - | chr1.2:48948748-48948767 | MS.gene24619:intron | 50.0% | |
| GCTGTAGCAAGGTCGAACAT+TGG | + | chr1.2:48945024-48945043 | None:intergenic | 50.0% | |
| GGAGTGGAATCGGAAGAGAA+AGG | + | chr1.2:48943544-48943563 | None:intergenic | 50.0% | |
| GGTTCAGCACCTGATATTGC+TGG | - | chr1.2:48945891-48945910 | MS.gene24619:intron | 50.0% | |
| GTACGGGATAGATTGTTGGG+TGG | - | chr1.2:48946451-48946470 | MS.gene24619:intron | 50.0% | |
| GTCATCTCCATGTCTCGTCA+AGG | + | chr1.2:48947588-48947607 | None:intergenic | 50.0% | |
| GTGTCAGACCACTAGAGGTA+GGG | - | chr1.2:48946665-48946684 | MS.gene24619:intron | 50.0% | |
| GTTATCCCACTAAGTGGCGT+CGG | + | chr1.2:48946808-48946827 | None:intergenic | 50.0% | |
| TACCGAACTGCTGATCTTGG+TGG | - | chr1.2:48949624-48949643 | MS.gene24619:CDS | 50.0% | |
| TACCTCCCTCACCAATGTTG+AGG | + | chr1.2:48945848-48945867 | None:intergenic | 50.0% | |
| TCGGTTAGGCGGAATAAGGT+TGG | - | chr1.2:48944915-48944934 | MS.gene24619:intron | 50.0% | |
| TGCAGCCTCAACATTGGTGA+GGG | - | chr1.2:48945840-48945859 | MS.gene24619:intron | 50.0% | |
| TGCCACCAAGATCAGCAGTT+CGG | + | chr1.2:48949629-48949648 | None:intergenic | 50.0% | |
| TGTAACCGACGCCACTTAGT+GGG | - | chr1.2:48946800-48946819 | MS.gene24619:intron | 50.0% | |
| TTGCAGCCTCAACATTGGTG+AGG | - | chr1.2:48945839-48945858 | MS.gene24619:intron | 50.0% | |
| ! | AAGGGACTGAGTTCTGATGG+TGG | + | chr1.2:48948446-48948465 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1.2:48944293-48944312 | None:intergenic | 50.0% |
| ! | GACCAGAAGTTGAGGGGTTT+TGG | + | chr1.2:48949107-48949126 | None:intergenic | 50.0% |
| ! | TAGGGAAATCTTTTGGCGGC+TGG | - | chr1.2:48946057-48946076 | MS.gene24619:intron | 50.0% |
| !! | ACCTCTGTGCTGGCTTGATT+GGG | - | chr1.2:48945710-48945729 | MS.gene24619:intron | 50.0% |
| !! | GAGTTCTGATGGTGGTGGAA+CGG | + | chr1.2:48948438-48948457 | None:intergenic | 50.0% |
| !! | GCTATGTGACTTGGTGGTCA+CGG | - | chr1.2:48949380-48949399 | MS.gene24619:intron | 50.0% |
| !!! | GAGGGGTTTTGGATAAGGGA+GGG | + | chr1.2:48949096-48949115 | None:intergenic | 50.0% |
| !!! | TGAGGGGTTTTGGATAAGGG+AGG | + | chr1.2:48949097-48949116 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr1.2:48947962-48947981 | MS.gene24619:intron | 55.0% | |
| AGCCTCAACATTGGTGAGGG+AGG | - | chr1.2:48945843-48945862 | MS.gene24619:intron | 55.0% | |
| ATGCCCTTTACCGATAGGGG+TGG | + | chr1.2:48944958-48944977 | None:intergenic | 55.0% | |
| ATGGCCACCCCTATCGGTAA+AGG | - | chr1.2:48944951-48944970 | MS.gene24619:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1.2:48944278-48944297 | MS.gene24619:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1.2:48944285-48944304 | MS.gene24619:intron | 55.0% | |
| GACCAAGAAGTGGCCAAGCA+AGG | + | chr1.2:48948640-48948659 | None:intergenic | 55.0% | |
| GAGCTCAGCAGCAAAGCTGT+TGG | + | chr1.2:48949519-48949538 | None:intergenic | 55.0% | |
| GCATCTGTGCCAGACATGCA+TGG | + | chr1.2:48948557-48948576 | None:intergenic | 55.0% | |
| GGCCAAGCAAGGACATAGTC+TGG | + | chr1.2:48948629-48948648 | None:intergenic | 55.0% | |
| GGCTTCCGAGTGTTCTTCTG+AGG | + | chr1.2:48943501-48943520 | None:intergenic | 55.0% | |
| GGTGTCAGACCACTAGAGGT+AGG | - | chr1.2:48946664-48946683 | MS.gene24619:intron | 55.0% | |
| GTCCTTGCTTGGCCACTTCT+TGG | - | chr1.2:48948635-48948654 | MS.gene24619:intron | 55.0% | |
| TGGCCACCCCTATCGGTAAA+GGG | - | chr1.2:48944952-48944971 | MS.gene24619:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1.2:48944279-48944298 | MS.gene24619:intron | 55.0% | |
| TTACCGATAGGGGTGGCCAT+TGG | + | chr1.2:48944951-48944970 | None:intergenic | 55.0% | |
| ! | ATGCGTGAGCTCTAGTGCAC+CGG | - | chr1.2:48948062-48948081 | MS.gene24619:CDS | 55.0% |
| ! | CTTTTCCCCGGCGATGGTAT+CGG | - | chr1.2:48943577-48943596 | MS.gene24619:CDS | 55.0% |
| ! | GCACTTGCTGAGGCTGTACA+TGG | - | chr1.2:48945870-48945889 | MS.gene24619:intron | 55.0% |
| !! | CCTCTGTGCTGGCTTGATTG+GGG | - | chr1.2:48945711-48945730 | MS.gene24619:intron | 55.0% |
| !! | CTCTGTGCTGGCTTGATTGG+GGG | - | chr1.2:48945712-48945731 | MS.gene24619:intron | 55.0% |
| !! | GACCTCTGTGCTGGCTTGAT+TGG | - | chr1.2:48945709-48945728 | MS.gene24619:intron | 55.0% |
| !! | GGACTGAGTTCTGATGGTGG+TGG | + | chr1.2:48948443-48948462 | None:intergenic | 55.0% |
| !! | GGGAGGTATTGCACTTGCTG+AGG | - | chr1.2:48945860-48945879 | MS.gene24619:intron | 55.0% |
| !! | GGTTGGCTTGAAAGGGCCAA+TGG | - | chr1.2:48944932-48944951 | MS.gene24619:intron | 55.0% |
| !! | TCTGTGCTGGCTTGATTGGG+GGG | - | chr1.2:48945713-48945732 | MS.gene24619:intron | 55.0% |
| ACCATCGCCGGGGAAAAGAG+TGG | + | chr1.2:48943575-48943594 | None:intergenic | 60.0% | |
| CCCCAATCAAGCCAGCACAG+AGG | + | chr1.2:48945714-48945733 | None:intergenic | 60.0% | |
| CTCACGCATATGCAGGGACC+GGG | + | chr1.2:48948051-48948070 | None:intergenic | 60.0% | |
| GCTCACGCATATGCAGGGAC+CGG | + | chr1.2:48948052-48948071 | None:intergenic | 60.0% | |
| GGGAAAAGAGTGGCGCGGAT+CGG | + | chr1.2:48943565-48943584 | None:intergenic | 60.0% | |
| TTCGGGACCGATACCATCGC+CGG | + | chr1.2:48943587-48943606 | None:intergenic | 60.0% | |
| ! | ATCCGCGCCACTCTTTTCCC+CGG | - | chr1.2:48943565-48943584 | MS.gene24619:CDS | 60.0% |
| ! | CAAATGGTGGGACGCCTTCC+CGG | - | chr1.2:48948030-48948049 | MS.gene24619:intron | 60.0% |
| ! | TGCGTGAGCTCTAGTGCACC+GGG | - | chr1.2:48948063-48948082 | MS.gene24619:CDS | 60.0% |
| !! | GAGGGGTGTCAGACCACTAG+AGG | - | chr1.2:48946660-48946679 | MS.gene24619:intron | 60.0% |
| !! | GCTGGCTTGATTGGGGGGTT+GGG | - | chr1.2:48945718-48945737 | MS.gene24619:intron | 60.0% |
| !! | GTGGGGTATCGGTGTCGCAT+TGG | + | chr1.2:48949334-48949353 | None:intergenic | 60.0% |
| !! | TGCTGGCTTGATTGGGGGGT+TGG | - | chr1.2:48945717-48945736 | MS.gene24619:intron | 60.0% |
| AAGAGTGGCGCGGATCGGAG+TGG | + | chr1.2:48943560-48943579 | None:intergenic | 65.0% | |
| CGCATATGCAGGGACCGGGA+AGG | + | chr1.2:48948047-48948066 | None:intergenic | 65.0% | |
| GGCGCGGATCGGAGTGGAAT+CGG | + | chr1.2:48943554-48943573 | None:intergenic | 65.0% | |
| GGGCCAATGGCCACCCCTAT+CGG | - | chr1.2:48944945-48944964 | MS.gene24619:intron | 65.0% | |
| GGGGGTTGGGCTTGACACCA+AGG | - | chr1.2:48945731-48945750 | MS.gene24619:intron | 65.0% | |
| TCGGGACCGATACCATCGCC+GGG | + | chr1.2:48943586-48943605 | None:intergenic | 65.0% | |
| ! | GCCACTCTTTTCCCCGGCGA+TGG | - | chr1.2:48943571-48943590 | MS.gene24619:CDS | 65.0% |
| !! | CGGGAAGGCGTCCCACCATT+TGG | + | chr1.2:48948032-48948051 | None:intergenic | 65.0% |
| CGCCGGGGAAAAGAGTGGCG+CGG | + | chr1.2:48943570-48943589 | None:intergenic | 70.0% | |
| CGGGACCGATACCATCGCCG+GGG | + | chr1.2:48943585-48943604 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 48943484 | 48949695 | 48943484 | ID=MS.gene24619 |
| chr1.2 | mRNA | 48943484 | 48949695 | 48943484 | ID=MS.gene24619.t1;Parent=MS.gene24619 |
| chr1.2 | exon | 48949552 | 48949695 | 48949552 | ID=MS.gene24619.t1.exon1;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48949552 | 48949695 | 48949552 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48948046 | 48948366 | 48948046 | ID=MS.gene24619.t1.exon2;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48948046 | 48948366 | 48948046 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48947803 | 48947964 | 48947803 | ID=MS.gene24619.t1.exon3;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48947803 | 48947964 | 48947803 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48947638 | 48947712 | 48947638 | ID=MS.gene24619.t1.exon4;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48947638 | 48947712 | 48947638 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48947427 | 48947536 | 48947427 | ID=MS.gene24619.t1.exon5;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48947427 | 48947536 | 48947427 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48947262 | 48947334 | 48947262 | ID=MS.gene24619.t1.exon6;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48947262 | 48947334 | 48947262 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| chr1.2 | exon | 48943484 | 48943675 | 48943484 | ID=MS.gene24619.t1.exon7;Parent=MS.gene24619.t1 |
| chr1.2 | CDS | 48943484 | 48943675 | 48943484 | ID=cds.MS.gene24619.t1;Parent=MS.gene24619.t1 |
| Gene Sequence |
| Protein sequence |
