Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060064.t1 | XP_013448021.1 | 96.1 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 2.00E-232 | 814.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060064.t1 | Q67ZU1 | 60.0 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 1.1e-143 | 511.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060064.t1 | A0A072TYW1 | 96.1 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 1.4e-232 | 814.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060063 | MS.gene060064 | 0.932975 | 3.79E-95 | -1.69E-46 |
| MS.gene060064 | MS.gene060065 | 0.91527 | 7.18E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060064 | MS.gene060315 | PPI |
| MS.gene060064 | MS.gene71663 | PPI |
| MS.gene060064 | MS.gene029609 | PPI |
| MS.gene060064 | MS.gene060313 | PPI |
| MS.gene029607 | MS.gene060064 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060064.t1 | MTR_7g029365 | 96.117 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 0.0 | 828 |
| MS.gene060064.t1 | MTR_7g029365 | 95.752 | 306 | 13 | 0 | 1 | 306 | 1 | 306 | 0.0 | 613 |
| MS.gene060064.t1 | MTR_6g023740 | 58.413 | 416 | 165 | 5 | 1 | 411 | 1 | 413 | 1.72e-178 | 504 |
| MS.gene060064.t1 | MTR_6g023715 | 55.583 | 412 | 156 | 9 | 5 | 411 | 5 | 394 | 1.07e-161 | 461 |
| MS.gene060064.t1 | MTR_6g023750 | 58.873 | 355 | 143 | 3 | 60 | 411 | 2 | 356 | 2.72e-155 | 443 |
| MS.gene060064.t1 | MTR_5g084950 | 52.139 | 374 | 172 | 2 | 38 | 410 | 33 | 400 | 2.22e-144 | 417 |
| MS.gene060064.t1 | MTR_7g081050 | 48.501 | 367 | 186 | 1 | 44 | 410 | 40 | 403 | 8.11e-134 | 390 |
| MS.gene060064.t1 | MTR_3g081040 | 48.656 | 372 | 187 | 2 | 40 | 410 | 36 | 404 | 1.22e-130 | 382 |
| MS.gene060064.t1 | MTR_3g081060 | 49.457 | 368 | 181 | 4 | 45 | 410 | 45 | 409 | 1.59e-130 | 382 |
| MS.gene060064.t1 | MTR_6g033965 | 45.924 | 368 | 192 | 4 | 44 | 410 | 41 | 402 | 3.98e-121 | 358 |
| MS.gene060064.t1 | MTR_3g080980 | 45.753 | 365 | 195 | 1 | 46 | 410 | 42 | 403 | 1.60e-115 | 343 |
| MS.gene060064.t1 | MTR_6g033975 | 44.565 | 368 | 196 | 5 | 44 | 410 | 41 | 401 | 2.58e-115 | 343 |
| MS.gene060064.t1 | MTR_7g081060 | 41.278 | 407 | 223 | 6 | 9 | 411 | 10 | 404 | 1.64e-110 | 330 |
| MS.gene060064.t1 | MTR_1g107330 | 39.633 | 381 | 218 | 5 | 38 | 412 | 25 | 399 | 2.46e-101 | 307 |
| MS.gene060064.t1 | MTR_0595s0010 | 60.084 | 238 | 88 | 5 | 1 | 234 | 1 | 235 | 4.07e-100 | 301 |
| MS.gene060064.t1 | MTR_1g107330 | 41.455 | 275 | 154 | 3 | 38 | 306 | 25 | 298 | 8.84e-72 | 229 |
| MS.gene060064.t1 | MTR_5g006650 | 47.953 | 171 | 73 | 4 | 69 | 234 | 44 | 203 | 2.86e-44 | 154 |
| MS.gene060064.t1 | MTR_6g085070 | 26.521 | 411 | 245 | 16 | 34 | 407 | 146 | 536 | 2.92e-18 | 87.4 |
| MS.gene060064.t1 | MTR_6g085070 | 26.521 | 411 | 245 | 16 | 34 | 407 | 278 | 668 | 5.28e-18 | 86.7 |
| MS.gene060064.t1 | MTR_8g103850 | 25.062 | 403 | 257 | 11 | 44 | 414 | 294 | 683 | 2.21e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060064.t1 | AT5G14180 | 60.000 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 0.0 | 521 |
| MS.gene060064.t1 | AT5G14180 | 64.194 | 310 | 111 | 0 | 102 | 411 | 7 | 316 | 2.15e-156 | 444 |
| MS.gene060064.t1 | AT5G14180 | 63.844 | 307 | 111 | 0 | 105 | 411 | 1 | 307 | 5.89e-154 | 437 |
| MS.gene060064.t1 | AT5G14180 | 59.667 | 300 | 114 | 4 | 12 | 306 | 14 | 311 | 3.81e-131 | 380 |
| MS.gene060064.t1 | AT5G14180 | 54.737 | 285 | 120 | 5 | 12 | 289 | 14 | 296 | 6.16e-110 | 325 |
| MS.gene060064.t1 | AT2G15230 | 38.462 | 364 | 214 | 4 | 47 | 410 | 32 | 385 | 1.87e-92 | 284 |
| MS.gene060064.t1 | AT1G73920 | 25.191 | 393 | 245 | 10 | 44 | 402 | 223 | 600 | 1.84e-18 | 88.2 |
| MS.gene060064.t1 | AT1G73920 | 25.191 | 393 | 245 | 10 | 44 | 402 | 292 | 669 | 2.34e-18 | 87.8 |
| MS.gene060064.t1 | AT1G18460 | 25.888 | 394 | 241 | 14 | 44 | 402 | 290 | 667 | 2.17e-17 | 84.7 |
Find 0 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATAAAATATTAAT+TGG | - | 51472:5637-5656 | MS.gene060064:intergenic | 0.0% |
| !! | TAATATATAAAATATTAATT+GGG | - | 51472:5636-5655 | MS.gene060064:intergenic | 0.0% |
| !! | AATAATAATAAAATGATTTG+TGG | - | 51472:3545-3564 | MS.gene060064:intergenic | 10.0% |
| !! | TATAGTATAAATGTTTATAT+TGG | - | 51472:5796-5815 | MS.gene060064:intergenic | 10.0% |
| !! | TATATCTTCATAAAAAATTA+TGG | + | 51472:3204-3223 | MS.gene060064:intron | 10.0% |
| !!! | CATAATTTTATACATAAAAA+AGG | + | 51472:5472-5491 | MS.gene060064:intron | 10.0% |
| !! | AAAAATTTATGTATTAGAGA+AGG | - | 51472:4846-4865 | MS.gene060064:intergenic | 15.0% |
| !! | AAGATACATTAATTTCATTA+AGG | - | 51472:4802-4821 | MS.gene060064:intergenic | 15.0% |
| !! | ACAAATAGAATAGTAAAAAA+AGG | - | 51472:5145-5164 | MS.gene060064:intergenic | 15.0% |
| !! | AGAACATTATTAATTGTTTA+AGG | + | 51472:6119-6138 | MS.gene060064:intron | 15.0% |
| !! | ATTACTATTACATTAATTAG+AGG | - | 51472:3954-3973 | MS.gene060064:intergenic | 15.0% |
| !! | CAAATAGAATAGTAAAAAAA+GGG | - | 51472:5144-5163 | MS.gene060064:intergenic | 15.0% |
| !! | CTAACATTTAATTAGATATT+TGG | + | 51472:6367-6386 | MS.gene060064:intron | 15.0% |
| !! | GAATGAAATTCAATAAATAA+GGG | + | 51472:2950-2969 | MS.gene060064:intron | 15.0% |
| !! | TAATGTAATAGTAATAGTAT+AGG | + | 51472:3959-3978 | MS.gene060064:intron | 15.0% |
| !! | TAATTGTTAATTAGAAGAAA+TGG | - | 51472:3514-3533 | MS.gene060064:intergenic | 15.0% |
| !! | TATATAAGTTTATAAAATGG+AGG | + | 51472:1469-1488 | MS.gene060064:intron | 15.0% |
| !! | TGAATGAAATTCAATAAATA+AGG | + | 51472:2949-2968 | MS.gene060064:intron | 15.0% |
| !! | TTAAGGATTTATTACAATAA+AGG | - | 51472:4785-4804 | MS.gene060064:intergenic | 15.0% |
| !! | TTTACATTTCTTAAAATTTG+TGG | + | 51472:793-812 | MS.gene060064:intron | 15.0% |
| !!! | AAAGTTTTTTTTCCAATAAA+TGG | + | 51472:2630-2649 | MS.gene060064:intron | 15.0% |
| !!! | AAGTTTTTTTTCCAATAAAT+GGG | + | 51472:2631-2650 | MS.gene060064:intron | 15.0% |
| !!! | AATATTTTTTTGTTTGTTTG+AGG | + | 51472:4203-4222 | MS.gene060064:intron | 15.0% |
| !!! | ACAATAAAGGTTTTTTTTTT+TGG | - | 51472:4772-4791 | MS.gene060064:intergenic | 15.0% |
| !!! | ATTTGTTGTTATTTAATCAA+AGG | - | 51472:2297-2316 | MS.gene060064:intergenic | 15.0% |
| !!! | CATGCATTTTATTATATTTT+TGG | - | 51472:1304-1323 | MS.gene060064:intergenic | 15.0% |
| !!! | GTAAATAGAAAATATTTTCA+TGG | - | 51472:778-797 | MS.gene060064:intergenic | 15.0% |
| !!! | TTTGTTGTTATTTAATCAAA+GGG | - | 51472:2296-2315 | MS.gene060064:intergenic | 15.0% |
| !!! | TTTGTTTATGCTTATTTTTA+AGG | + | 51472:4312-4331 | MS.gene060064:intron | 15.0% |
| !! | AAAAATGTAACCATAAAACT+TGG | + | 51472:1851-1870 | MS.gene060064:intron | 20.0% |
| !! | AACAAAAAACATAAACATAC+TGG | - | 51472:4181-4200 | MS.gene060064:intergenic | 20.0% |
| !! | AATTAAAACTGTTAGAAACA+AGG | + | 51472:4692-4711 | MS.gene060064:intron | 20.0% |
| !! | AATTATGTTAAATAAGTAGC+TGG | - | 51472:4539-4558 | MS.gene060064:intergenic | 20.0% |
| !! | ACAAAAAACATAAACATACT+GGG | - | 51472:4180-4199 | MS.gene060064:intergenic | 20.0% |
| !! | ACCACACAATAAATAATTTA+AGG | - | 51472:4665-4684 | MS.gene060064:intergenic | 20.0% |
| !! | AGAAAGTCTCAATTAATAAA+TGG | - | 51472:4892-4911 | MS.gene060064:intergenic | 20.0% |
| !! | GAAAAAAAAAGACATTTATC+TGG | - | 51472:1376-1395 | MS.gene060064:intergenic | 20.0% |
| !! | GAAAATGCTAACAATAAAAT+TGG | - | 51472:4643-4662 | MS.gene060064:intergenic | 20.0% |
| !! | TCATGTAAAAAAGTAAGTAA+TGG | - | 51472:5045-5064 | MS.gene060064:intergenic | 20.0% |
| !! | TCCTTAAATTATTTATTGTG+TGG | + | 51472:4661-4680 | MS.gene060064:intron | 20.0% |
| !! | TGAAGACTATTCAAATATTT+AGG | - | 51472:4346-4365 | MS.gene060064:intergenic | 20.0% |
| !! | TTCTTCCAAAAACAAATTTA+AGG | + | 51472:3903-3922 | MS.gene060064:intron | 20.0% |
| !! | TTTATCTGGATATGAAAAAA+AGG | - | 51472:1362-1381 | MS.gene060064:intergenic | 20.0% |
| !!! | AAAATAATAGCCAAGTTTTA+TGG | - | 51472:1864-1883 | MS.gene060064:intergenic | 20.0% |
| !!! | ACATTCCTTAAATTTGTTTT+TGG | - | 51472:3911-3930 | MS.gene060064:intergenic | 20.0% |
| !!! | ACATTTTTTTTTTTGCATGA+TGG | - | 51472:6076-6095 | MS.gene060064:intergenic | 20.0% |
| !!! | ATGCTTATTTTTAAGGAAAA+TGG | + | 51472:4319-4338 | MS.gene060064:intron | 20.0% |
| !!! | CATATTTTTGTGTTACTTTT+CGG | + | 51472:2566-2585 | MS.gene060064:intron | 20.0% |
| !!! | CATTTTTCTCTTAGATATTT+TGG | - | 51472:1896-1915 | MS.gene060064:intergenic | 20.0% |
| !!! | CTTTTTGGAATTTAAATAGA+CGG | + | 51472:3610-3629 | MS.gene060064:intron | 20.0% |
| !!! | TAAGCAAAAAACTACATTTT+AGG | - | 51472:2426-2445 | MS.gene060064:intergenic | 20.0% |
| !!! | TAATTTTGACTTGTATTTGT+AGG | - | 51472:4415-4434 | MS.gene060064:intergenic | 20.0% |
| !!! | TTGAGTTTTTTTTAAATACG+AGG | + | 51472:6036-6055 | MS.gene060064:intron | 20.0% |
| !!! | TTGTTGTTTTTTCTTTCAAT+CGG | + | 51472:6261-6280 | MS.gene060064:intron | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+CGG | - | 51472:2327-2346 | MS.gene060064:intergenic | 20.0% |
| !!! | TTTTTGGTGAAAAAATTGTT+AGG | - | 51472:2500-2519 | MS.gene060064:intergenic | 20.0% |
| ! | AACTTCAAATAAATCATGCT+AGG | + | 51472:3289-3308 | MS.gene060064:intron | 25.0% |
| ! | AATAGTCTTCAACATAAAAC+TGG | + | 51472:4355-4374 | MS.gene060064:intron | 25.0% |
| ! | AATGTATGTATGTATGTGTA+TGG | + | 51472:3926-3945 | MS.gene060064:intron | 25.0% |
| ! | AATTAAATGTTTATCCCTTG+TGG | - | 51472:1042-1061 | MS.gene060064:intergenic | 25.0% |
| ! | AGAATAAGATTCCCATTTAT+TGG | - | 51472:2645-2664 | MS.gene060064:intergenic | 25.0% |
| ! | AGTCAAAATTCTAATATGGA+TGG | + | 51472:2036-2055 | MS.gene060064:intron | 25.0% |
| ! | ATAAAGAGAATGTCGTTATA+AGG | - | 51472:3371-3390 | MS.gene060064:intergenic | 25.0% |
| ! | ATGTATGTATGTATGTGTAT+GGG | + | 51472:3927-3946 | MS.gene060064:intron | 25.0% |
| ! | ATGTTGAGAATTTACTTGAT+AGG | + | 51472:6662-6681 | MS.gene060064:CDS | 25.0% |
| ! | ATGTTGGATAGGTTATATAT+TGG | - | 51472:6580-6599 | MS.gene060064:intergenic | 25.0% |
| ! | ATTGGTCAAAGTAAAATATG+TGG | - | 51472:5778-5797 | MS.gene060064:intergenic | 25.0% |
| ! | ATTTCTCCTCCAAAAAATTA+AGG | - | 51472:2770-2789 | MS.gene060064:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | 51472:2401-2420 | MS.gene060064:intergenic | 25.0% |
| ! | CGAAAAGTAACACAAAAATA+TGG | - | 51472:2568-2587 | MS.gene060064:intergenic | 25.0% |
| ! | CGTCTATTTAAATTCCAAAA+AGG | - | 51472:3612-3631 | MS.gene060064:intergenic | 25.0% |
| ! | GAAAAAAGTTACAAAAACAG+TGG | - | 51472:1340-1359 | MS.gene060064:intergenic | 25.0% |
| ! | GACAATTTCTTATGTTACAT+TGG | - | 51472:5596-5615 | MS.gene060064:intergenic | 25.0% |
| ! | GATTATAACATAATGCACTA+TGG | + | 51472:6541-6560 | MS.gene060064:CDS | 25.0% |
| ! | GTAATAATCAAGACCATAAT+CGG | - | 51472:3815-3834 | MS.gene060064:intergenic | 25.0% |
| ! | GTTTATATACGATGTGAATT+TGG | + | 51472:3425-3444 | MS.gene060064:intron | 25.0% |
| ! | TAAATTCCAAAAAGGTTTGA+AGG | - | 51472:3604-3623 | MS.gene060064:intergenic | 25.0% |
| ! | TAATTTGACCTAAAAACAAG+AGG | + | 51472:4447-4466 | MS.gene060064:intron | 25.0% |
| ! | TAGAATTTAGTTGGACAAAT+TGG | - | 51472:958-977 | MS.gene060064:intergenic | 25.0% |
| ! | TAGCAGAATTTAATCCTAAA+GGG | + | 51472:5554-5573 | MS.gene060064:CDS | 25.0% |
| ! | TAGTGCATTATGTTATAATC+TGG | - | 51472:6541-6560 | MS.gene060064:intergenic | 25.0% |
| ! | TCTAAGAGAAAAATGACATA+TGG | + | 51472:1901-1920 | MS.gene060064:intron | 25.0% |
| ! | TTCCAGTCAAAATTCTAATA+TGG | + | 51472:2032-2051 | MS.gene060064:intron | 25.0% |
| ! | TTGGTCAAAGTAAAATATGT+GGG | - | 51472:5777-5796 | MS.gene060064:intergenic | 25.0% |
| ! | TTTATAAAATGGAGGACATA+AGG | + | 51472:1477-1496 | MS.gene060064:intron | 25.0% |
| ! | TTTCTCCTCCAAAAAATTAA+GGG | - | 51472:2769-2788 | MS.gene060064:intergenic | 25.0% |
| ! | TTTGTCACCATGTTAAAATA+CGG | - | 51472:1687-1706 | MS.gene060064:intergenic | 25.0% |
| !! | ACAACAATTTTTACCTGAAT+TGG | - | 51472:5849-5868 | MS.gene060064:intergenic | 25.0% |
| !! | CTATTCTATTTGTCTAAAAC+TGG | + | 51472:5152-5171 | MS.gene060064:intron | 25.0% |
| !! | TTGCAATCTTAACTTTTTGA+AGG | + | 51472:1128-1147 | MS.gene060064:intron | 25.0% |
| !! | TTTATTTGTGTTACTGACTA+AGG | + | 51472:6439-6458 | MS.gene060064:intron | 25.0% |
| !!! | AATCGATTGAATTTTGAGAA+GGG | - | 51472:6313-6332 | MS.gene060064:intergenic | 25.0% |
| !!! | AGTGATAACCCTTAATTTTT+TGG | + | 51472:2667-2686 | MS.gene060064:intron | 25.0% |
| !!! | ATCCATATTAGAATTTTGAC+TGG | - | 51472:2037-2056 | MS.gene060064:intergenic | 25.0% |
| !!! | GTTTACATTATTGATTTGCT+AGG | - | 51472:3466-3485 | MS.gene060064:intergenic | 25.0% |
| !!! | TACACCAATTTTTTGAGAAA+GGG | - | 51472:1791-1810 | MS.gene060064:intergenic | 25.0% |
| !!! | TCGTGATTATTGTGTTATTT+TGG | + | 51472:5963-5982 | MS.gene060064:intron | 25.0% |
| !!! | TTACACCAATTTTTTGAGAA+AGG | - | 51472:1792-1811 | MS.gene060064:intergenic | 25.0% |
| !!! | TTTGTTTTTGGAAGAAACAA+TGG | - | 51472:3899-3918 | MS.gene060064:intergenic | 25.0% |
| AAACAGATCACTACACTATT+TGG | + | 51472:5529-5548 | MS.gene060064:intron | 30.0% | |
| AAACCACATTCATTAGATTG+AGG | - | 51472:852-871 | MS.gene060064:intergenic | 30.0% | |
| AAATAGTGTAGTGATCTGTT+TGG | - | 51472:5530-5549 | MS.gene060064:intergenic | 30.0% | |
| AACACATAATCAAAAACAGC+AGG | - | 51472:4974-4993 | MS.gene060064:intergenic | 30.0% | |
| AACATCGAAGAATGTATTGA+TGG | + | 51472:6342-6361 | MS.gene060064:intron | 30.0% | |
| AAGGATTTATTCTGTGTACT+CGG | - | 51472:6208-6227 | MS.gene060064:intergenic | 30.0% | |
| AAGTTTGTGCACGATTATTA+AGG | + | 51472:2835-2854 | MS.gene060064:intron | 30.0% | |
| AATCATGCTAGGAAATTTAG+AGG | + | 51472:3300-3319 | MS.gene060064:intron | 30.0% | |
| ACTTCTCCTCCAAAAAATTA+AGG | - | 51472:2679-2698 | MS.gene060064:intergenic | 30.0% | |
| AGTCTCTTCTAACTTAACTA+AGG | - | 51472:3693-3712 | MS.gene060064:intergenic | 30.0% | |
| ATAATCGAGGTCTGTATATT+TGG | - | 51472:3867-3886 | MS.gene060064:intergenic | 30.0% | |
| ATCAACATCAACAAAGAACA+TGG | + | 51472:5913-5932 | MS.gene060064:CDS | 30.0% | |
| ATCTGAACATAATACAACGT+GGG | + | 51472:4012-4031 | MS.gene060064:intron | 30.0% | |
| ATGTTATTACCTGAAGTTCT+TGG | - | 51472:705-724 | MS.gene060064:intergenic | 30.0% | |
| ATTACCAACTCTTTCTCTTT+AGG | - | 51472:4474-4493 | MS.gene060064:intergenic | 30.0% | |
| ATTATGTGTTTAGCCAAACT+GGG | + | 51472:4984-5003 | MS.gene060064:CDS | 30.0% | |
| CACGAGTTAAATCTTACTTT+GGG | - | 51472:5948-5967 | MS.gene060064:intergenic | 30.0% | |
| CATTCATTTAATGATGCACA+TGG | + | 51472:2362-2381 | MS.gene060064:intron | 30.0% | |
| CCACTAGCTACATTTAATAA+GGG | - | 51472:2918-2937 | MS.gene060064:intergenic | 30.0% | |
| CCAGCATTTATCAAATGATT+GGG | + | 51472:2065-2084 | MS.gene060064:intron | 30.0% | |
| CTAATGCTAAAAGATATCAC+AGG | - | 51472:1410-1429 | MS.gene060064:intergenic | 30.0% | |
| CTAGCAGAATTTAATCCTAA+AGG | + | 51472:5553-5572 | MS.gene060064:CDS | 30.0% | |
| CTTCTCAAAATTCAATCGAT+TGG | + | 51472:6312-6331 | MS.gene060064:intron | 30.0% | |
| CTTCTCCTCCAAAAAATTAA+GGG | - | 51472:2678-2697 | MS.gene060064:intergenic | 30.0% | |
| GACTATAATTTAGAGACAGA+GGG | - | 51472:2810-2829 | MS.gene060064:intergenic | 30.0% | |
| GATATTACAACATGGAGTAT+TGG | + | 51472:1242-1261 | MS.gene060064:CDS | 30.0% | |
| GCACAAAAACATTGTATTGA+AGG | - | 51472:5450-5469 | MS.gene060064:intergenic | 30.0% | |
| GCACGATTATTAAGGAAAAA+TGG | + | 51472:2843-2862 | MS.gene060064:intron | 30.0% | |
| TAAGATTTGACTGGATATGT+CGG | + | 51472:1012-1031 | MS.gene060064:intron | 30.0% | |
| TAATCGAGGTCTGTATATTT+GGG | - | 51472:3866-3885 | MS.gene060064:intergenic | 30.0% | |
| TACTTCTCTTATCAACATCA+TGG | - | 51472:6696-6715 | MS.gene060064:intergenic | 30.0% | |
| TATAAGGTAACTCGTATGTA+CGG | - | 51472:3355-3374 | MS.gene060064:intergenic | 30.0% | |
| TATCTGAACATAATACAACG+TGG | + | 51472:4011-4030 | MS.gene060064:intron | 30.0% | |
| TCAAAATTCAATCGATTGGA+AGG | + | 51472:6316-6335 | MS.gene060064:intron | 30.0% | |
| TCAATCTAATGAATGTGGTT+TGG | + | 51472:851-870 | MS.gene060064:intron | 30.0% | |
| TCACGAGTTAAATCTTACTT+TGG | - | 51472:5949-5968 | MS.gene060064:intergenic | 30.0% | |
| TCCACTAGCTACATTTAATA+AGG | - | 51472:2919-2938 | MS.gene060064:intergenic | 30.0% | |
| TCCAGCATTTATCAAATGAT+TGG | + | 51472:2064-2083 | MS.gene060064:intron | 30.0% | |
| TGAAGGTTACAACTAAAGAT+GGG | + | 51472:1145-1164 | MS.gene060064:intron | 30.0% | |
| TGGATAGGTTATATATTGGT+GGG | - | 51472:6576-6595 | MS.gene060064:intergenic | 30.0% | |
| TGGGAGTTAAATAACAACTT+GGG | + | 51472:2084-2103 | MS.gene060064:intron | 30.0% | |
| TGTTAGAAACAAGGTTAGAT+TGG | + | 51472:4701-4720 | MS.gene060064:intron | 30.0% | |
| TTCAACGAGTAGAATTTAGT+TGG | - | 51472:967-986 | MS.gene060064:intergenic | 30.0% | |
| TTGAAGGTTACAACTAAAGA+TGG | + | 51472:1144-1163 | MS.gene060064:intron | 30.0% | |
| TTGGATAGGTTATATATTGG+TGG | - | 51472:6577-6596 | MS.gene060064:intergenic | 30.0% | |
| TTGGGAGTTAAATAACAACT+TGG | + | 51472:2083-2102 | MS.gene060064:intron | 30.0% | |
| TTTATGTACCTCACCAATAA+AGG | - | 51472:5325-5344 | MS.gene060064:intergenic | 30.0% | |
| ! | AATCAATTTTCCTTCAGAGA+AGG | - | 51472:5217-5236 | MS.gene060064:intergenic | 30.0% |
| ! | ACAATTTTTACCTGAATTGG+TGG | - | 51472:5846-5865 | MS.gene060064:intergenic | 30.0% |
| ! | ACTAATCCTTCAAACCTTTT+TGG | + | 51472:3595-3614 | MS.gene060064:intron | 30.0% |
| ! | ATTAGCATGTGATTTTGCAA+TGG | + | 51472:1081-1100 | MS.gene060064:intron | 30.0% |
| ! | GAAAATTGACTCATGAGATT+AGG | - | 51472:1927-1946 | MS.gene060064:intergenic | 30.0% |
| ! | TCCTTTGGAAGAAATCAAAA+TGG | + | 51472:616-635 | MS.gene060064:CDS | 30.0% |
| ! | TCTATTTGTCTAAAACTGGA+AGG | + | 51472:5156-5175 | MS.gene060064:intron | 30.0% |
| ! | TTATGGTCTTGATTATTACG+TGG | + | 51472:3816-3835 | MS.gene060064:intron | 30.0% |
| ! | TTCTTTGTTGATGTTGATTG+AGG | - | 51472:5911-5930 | MS.gene060064:intergenic | 30.0% |
| ! | TTGATGATCTGAAGATTGTT+AGG | + | 51472:1982-2001 | MS.gene060064:intron | 30.0% |
| ! | TTTTCGGCAAACATTAATCA+TGG | + | 51472:2582-2601 | MS.gene060064:intron | 30.0% |
| !! | CAATCGATTGAATTTTGAGA+AGG | - | 51472:6314-6333 | MS.gene060064:intergenic | 30.0% |
| !! | GGATTAGTTTCTACAATTAC+AGG | - | 51472:3583-3602 | MS.gene060064:intergenic | 30.0% |
| !!! | ACACCAATTTTTTGAGAAAG+GGG | - | 51472:1790-1809 | MS.gene060064:intergenic | 30.0% |
| !!! | ACCATTTTGATTTCTTCCAA+AGG | - | 51472:620-639 | MS.gene060064:intergenic | 30.0% |
| !!! | GATAACCCTTAATTTTTTGG+AGG | + | 51472:2670-2689 | MS.gene060064:intron | 30.0% |
| AAAAACAGCAGGTAGATCAT+AGG | - | 51472:4963-4982 | MS.gene060063:intergenic | 35.0% | |
| AAATACGGAGTTTGGTTAAG+TGG | - | 51472:1672-1691 | MS.gene060064:intergenic | 35.0% | |
| AACAACTTGGGCTAATCATT+TGG | + | 51472:2096-2115 | MS.gene060064:intron | 35.0% | |
| AATTAATCTTCTGCCCAGTT+TGG | - | 51472:5000-5019 | MS.gene060064:intergenic | 35.0% | |
| ACTCCATGTTGTAATATCAC+CGG | - | 51472:1240-1259 | MS.gene060064:intergenic | 35.0% | |
| AGTCTTCAACATAAAACTGG+AGG | + | 51472:4358-4377 | MS.gene060064:intron | 35.0% | |
| ATAACAACAAATACACCCTC+CGG | + | 51472:2305-2324 | MS.gene060064:intron | 35.0% | |
| ATACAAATGCCAAGAACTTC+AGG | + | 51472:693-712 | MS.gene060064:CDS | 35.0% | |
| ATGAAGATAGGTAGATCATG+TGG | - | 51472:6604-6623 | MS.gene060064:intergenic | 35.0% | |
| ATGCACTATCATTACTTGTG+AGG | + | 51472:1618-1637 | MS.gene060064:intron | 35.0% | |
| ATGTGGCTTAGATAAGCAAT+AGG | - | 51472:5270-5289 | MS.gene060064:intergenic | 35.0% | |
| CCAAATCTCACTCATTAAGT+GGG | + | 51472:915-934 | MS.gene060064:intron | 35.0% | |
| CCATGATCTGCTAGAATTAA+AGG | - | 51472:4085-4104 | MS.gene060064:intergenic | 35.0% | |
| CCATGTTAAAATACGGAGTT+TGG | - | 51472:1680-1699 | MS.gene060064:intergenic | 35.0% | |
| CCCAATCATTTGATAAATGC+TGG | - | 51472:2068-2087 | MS.gene060064:intergenic | 35.0% | |
| CCCTTATTAAATGTAGCTAG+TGG | + | 51472:2915-2934 | MS.gene060064:intron | 35.0% | |
| CCTTTAATTCTAGCAGATCA+TGG | + | 51472:4082-4101 | MS.gene060064:CDS | 35.0% | |
| CGACTATAATTTAGAGACAG+AGG | - | 51472:2811-2830 | MS.gene060064:intergenic | 35.0% | |
| CTACCTATCTTCATTAGCTA+TGG | + | 51472:6610-6629 | MS.gene060064:CDS | 35.0% | |
| CTTCTATGTTCTTACCCTTT+AGG | - | 51472:5571-5590 | MS.gene060064:intergenic | 35.0% | |
| GACTTTCTGTGTAAATATGC+AGG | + | 51472:4904-4923 | MS.gene060064:intron | 35.0% | |
| GATATCACAGGAAAAAGAGA+AGG | - | 51472:1398-1417 | MS.gene060064:intergenic | 35.0% | |
| GATTATGTGTTTAGCCAAAC+TGG | + | 51472:4983-5002 | MS.gene060064:CDS | 35.0% | |
| TAACATGGTGACAAAAAGTG+CGG | + | 51472:1692-1711 | MS.gene060064:intron | 35.0% | |
| TACCTCACCAATAAAGGATT+TGG | - | 51472:5319-5338 | MS.gene060064:intergenic | 35.0% | |
| TCATGGAGTTTACGATTTGA+CGG | - | 51472:761-780 | MS.gene060064:intergenic | 35.0% | |
| TCCTACGAATACCTCTAATT+CGG | + | 51472:734-753 | MS.gene060064:intron | 35.0% | |
| TGAGATTTGGCTGAACTAAT+TGG | - | 51472:905-924 | MS.gene060064:intergenic | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | - | 51472:2323-2342 | MS.gene060064:intergenic | 35.0% | |
| TGCTTATATTAGTGACCAGA+GGG | + | 51472:2440-2459 | MS.gene060064:intron | 35.0% | |
| TGTGGCTTAGATAAGCAATA+GGG | - | 51472:5269-5288 | MS.gene060064:intergenic | 35.0% | |
| TTCAACGACTAAGATTTGAC+TGG | + | 51472:1003-1022 | MS.gene060064:intron | 35.0% | |
| TTGCTAGGTTTAAGTGTTAG+TGG | - | 51472:3451-3470 | MS.gene060064:intergenic | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | - | 51472:2324-2343 | MS.gene060064:intergenic | 35.0% | |
| TTGCTTATATTAGTGACCAG+AGG | + | 51472:2439-2458 | MS.gene060064:intron | 35.0% | |
| TTGGGCTAATCATTTGGTTA+AGG | + | 51472:2102-2121 | MS.gene060064:intron | 35.0% | |
| ! | ACATAAACATACTGGGTTAG+AGG | - | 51472:4173-4192 | MS.gene060064:intergenic | 35.0% |
| ! | ATAAACATACTGGGTTAGAG+GGG | - | 51472:4171-4190 | MS.gene060064:intergenic | 35.0% |
| ! | CATAAACATACTGGGTTAGA+GGG | - | 51472:4172-4191 | MS.gene060064:intergenic | 35.0% |
| ! | CTCATGCTGATTACATTATG+GGG | + | 51472:6737-6756 | MS.gene060064:CDS | 35.0% |
| ! | GCTCATGCTGATTACATTAT+GGG | + | 51472:6736-6755 | MS.gene060064:CDS | 35.0% |
| ! | GGTGATTTCAAGTACAAGTT+GGG | - | 51472:3794-3813 | MS.gene060064:intergenic | 35.0% |
| ! | GTACTTGAAATCACCGATTA+TGG | + | 51472:3799-3818 | MS.gene060064:intron | 35.0% |
| ! | TGCTCATGCTGATTACATTA+TGG | + | 51472:6735-6754 | MS.gene060064:CDS | 35.0% |
| !! | ATTAAAGGCAAGTCTTGTTC+TGG | - | 51472:4070-4089 | MS.gene060064:intergenic | 35.0% |
| !! | ATTACAACATGGAGTATTGG+TGG | + | 51472:1245-1264 | MS.gene060064:CDS | 35.0% |
| !! | GAATTTTGAGAAGGGAGTTA+GGG | - | 51472:6305-6324 | MS.gene060064:intergenic | 35.0% |
| !! | TGAATTTTGAGAAGGGAGTT+AGG | - | 51472:6306-6325 | MS.gene060064:intergenic | 35.0% |
| !! | TTTTGGAAGAAACAATGGCA+GGG | - | 51472:3894-3913 | MS.gene060064:intergenic | 35.0% |
| !! | TTTTTGGAAGAAACAATGGC+AGG | - | 51472:3895-3914 | MS.gene060064:intergenic | 35.0% |
| !!! | CCAAACTCCGTATTTTAACA+TGG | + | 51472:1677-1696 | MS.gene060064:intron | 35.0% |
| !!! | CTTTAGGACCTCTTGTTTTT+AGG | - | 51472:4458-4477 | MS.gene060064:intergenic | 35.0% |
| !!! | GCGTGATAGTACTGTTTTTT+TGG | - | 51472:2516-2535 | MS.gene060064:intergenic | 35.0% |
| AACAAAGAACATGGTGCACT+TGG | + | 51472:5922-5941 | MS.gene060064:CDS | 40.0% | |
| AACAATGTCCGTGTTTCACT+TGG | - | 51472:5389-5408 | MS.gene060064:intergenic | 40.0% | |
| AACTATGCAGTTGTTAGACG+TGG | + | 51472:6487-6506 | MS.gene060064:intron | 40.0% | |
| AAGTCGTAGCAGTCAATTCT+AGG | - | 51472:5724-5743 | MS.gene060064:intergenic | 40.0% | |
| ACACGACTTGAAGCTTGATA+AGG | - | 51472:595-614 | MS.gene060064:intergenic | 40.0% | |
| ACTATGCAGTTGTTAGACGT+GGG | + | 51472:6488-6507 | MS.gene060064:intron | 40.0% | |
| AGAGTTGAAGGTAGAAATGG+TGG | + | 51472:1201-1220 | MS.gene060064:CDS | 40.0% | |
| AGCACATAGAGACTTGAGAA+AGG | - | 51472:5698-5717 | MS.gene060064:intergenic | 40.0% | |
| AGCCAAATCCTTTATTGGTG+AGG | + | 51472:5314-5333 | MS.gene060064:CDS | 40.0% | |
| AGGTAGATCATGTGGAATGT+TGG | - | 51472:6596-6615 | MS.gene060064:intergenic | 40.0% | |
| AGGTCCTAAAGAGAAAGAGT+TGG | + | 51472:4467-4486 | MS.gene060064:intron | 40.0% | |
| AGTCGTAGCAGTCAATTCTA+GGG | - | 51472:5723-5742 | MS.gene060064:intergenic | 40.0% | |
| ATATGCCTTCATCCAAAGGA+GGG | - | 51472:648-667 | MS.gene060064:intergenic | 40.0% | |
| ATTCCAGAAGGTAGAGTTGA+AGG | + | 51472:1189-1208 | MS.gene060064:CDS | 40.0% | |
| CAACCGGTGATATTACAACA+TGG | + | 51472:1234-1253 | MS.gene060064:CDS | 40.0% | |
| CAGGAGCAACAACATGTTAA+TGG | + | 51472:3328-3347 | MS.gene060064:intron | 40.0% | |
| CATGGAGTTTACGATTTGAC+GGG | - | 51472:760-779 | MS.gene060064:intergenic | 40.0% | |
| CCCACTTAATGAGTGAGATT+TGG | - | 51472:918-937 | MS.gene060064:intergenic | 40.0% | |
| CCTATCTTCATTAGCTATGG+AGG | + | 51472:6613-6632 | MS.gene060064:CDS | 40.0% | |
| CCTCCATAGCTAATGAAGAT+AGG | - | 51472:6616-6635 | MS.gene060064:intergenic | 40.0% | |
| CGACCTCAATCTAATGAATG+TGG | + | 51472:846-865 | MS.gene060064:intron | 40.0% | |
| CGTCCCCTTTCTCAAAAAAT+TGG | + | 51472:1784-1803 | MS.gene060064:intron | 40.0% | |
| GAGTTGAAGGTAGAAATGGT+GGG | + | 51472:1202-1221 | MS.gene060064:CDS | 40.0% | |
| GATCATGTGGAATGTTGGAT+AGG | - | 51472:6591-6610 | MS.gene060064:intergenic | 40.0% | |
| GATTATTACGTGGTCAAGCA+TGG | + | 51472:3826-3845 | MS.gene060064:intron | 40.0% | |
| GCCAAATCTCACTCATTAAG+TGG | + | 51472:914-933 | MS.gene060064:intron | 40.0% | |
| GGGCAGAAGATTAATTACGT+TGG | + | 51472:5004-5023 | MS.gene060064:CDS | 40.0% | |
| GGTAGAGTTGAAGGTAGAAA+TGG | + | 51472:1198-1217 | MS.gene060064:CDS | 40.0% | |
| GTTGCAGCCAAATCCTTTAT+TGG | + | 51472:5309-5328 | MS.gene060064:CDS | 40.0% | |
| GTTTGGATTGCTAACACTAG+AGG | + | 51472:4112-4131 | MS.gene060064:CDS | 40.0% | |
| TAAAACTGGAAGGCTGTGTT+TGG | + | 51472:5166-5185 | MS.gene060064:intron | 40.0% | |
| TCATCACACCAAGTGAAACA+CGG | + | 51472:5378-5397 | MS.gene060064:intron | 40.0% | |
| TGAACTAATTGGATACGCAG+AGG | - | 51472:894-913 | MS.gene060064:intergenic | 40.0% | |
| TTCGTAAATGCCACCAATTC+AGG | + | 51472:5833-5852 | MS.gene060064:intron | 40.0% | |
| TTTGAGTGTCCGACACATAT+TGG | - | 51472:5423-5442 | MS.gene060064:intergenic | 40.0% | |
| ! | AACACGGACATTGTTTCTCT+CGG | + | 51472:5394-5413 | MS.gene060064:intron | 40.0% |
| ! | CGGTGATTTCAAGTACAAGT+TGG | - | 51472:3795-3814 | MS.gene060064:intergenic | 40.0% |
| ! | GACTTGATGACTGCATTAAC+TGG | + | 51472:5739-5758 | MS.gene060064:CDS | 40.0% |
| ! | GTGTAAATATGCAGGCCTTT+TGG | + | 51472:4912-4931 | MS.gene060064:intron | 40.0% |
| !! | AGGAAATTTAGAGGAGTGTC+AGG | + | 51472:3309-3328 | MS.gene060064:intron | 40.0% |
| !! | ATAAAGCTGCTGATTTCAGC+TGG | - | 51472:5242-5261 | MS.gene060064:intergenic | 40.0% |
| !! | ATGGAGTATTGGTGGTAAGT+TGG | + | 51472:1253-1272 | MS.gene060064:intron | 40.0% |
| !! | CAGATCATGGCTTTGATGTT+TGG | + | 51472:4095-4114 | MS.gene060064:CDS | 40.0% |
| !!! | ATATGCAGGCCTTTTGGAAT+TGG | + | 51472:4918-4937 | MS.gene060064:intron | 40.0% |
| ACATAATACAACGTGGGTGC+AGG | + | 51472:4018-4037 | MS.gene060064:intron | 45.0% | |
| ACGCTGCTGCATGTTGAATT+CGG | + | 51472:3655-3674 | MS.gene060064:intron | 45.0% | |
| ATTCCGCGTCTGTTACATTG+TGG | + | 51472:1716-1735 | MS.gene060064:intron | 45.0% | |
| CATATGCCTTCATCCAAAGG+AGG | - | 51472:649-668 | MS.gene060064:intergenic | 45.0% | |
| CTACCTTCAACTCTACCTTC+TGG | - | 51472:1195-1214 | MS.gene060064:intergenic | 45.0% | |
| CTATGCAGTTGTTAGACGTG+GGG | + | 51472:6489-6508 | MS.gene060064:intron | 45.0% | |
| GATATGTCGGACAACCACAA+GGG | + | 51472:1025-1044 | MS.gene060064:intron | 45.0% | |
| GCACATATGCCTTCATCCAA+AGG | - | 51472:652-671 | MS.gene060064:intergenic | 45.0% | |
| GCATGTTGAATTCGGACTCA+AGG | + | 51472:3663-3682 | MS.gene060064:intron | 45.0% | |
| GCTTCTGCTGTCATTGTTCA+TGG | + | 51472:670-689 | MS.gene060064:CDS | 45.0% | |
| GTCCCAAGACCAATTCCAAA+AGG | - | 51472:4930-4949 | MS.gene060064:intergenic | 45.0% | |
| TAATTACGTTGGCCACTCTC+TGG | + | 51472:5015-5034 | MS.gene060064:CDS | 45.0% | |
| TCTCGGACACCAATATGTGT+CGG | + | 51472:5411-5430 | MS.gene060064:intron | 45.0% | |
| TGACTTCCTTAACCAGTGTC+CGG | + | 51472:2253-2272 | MS.gene060064:intron | 45.0% | |
| TTGACCCTTAACAAGTGTCC+CGG | - | 51472:2149-2168 | MS.gene060064:intergenic | 45.0% | |
| ! | AAATGGTGTTAGCCCTCCTT+TGG | + | 51472:633-652 | MS.gene060064:CDS | 45.0% |
| ! | AAGGTAGAAATGGTGGGACT+AGG | + | 51472:1208-1227 | MS.gene060064:CDS | 45.0% |
| ! | AGTAATGGAGTACCAGAGAG+TGG | - | 51472:5030-5049 | MS.gene060064:intergenic | 45.0% |
| ! | ATTTTCTCGACTACACCCTC+TGG | - | 51472:2458-2477 | MS.gene060064:intergenic | 45.0% |
| ! | GACAGAGGGAGTATGAGAAA+AGG | - | 51472:2796-2815 | MS.gene060064:intergenic | 45.0% |
| ! | GCTTTAGCTTCCTTCTCTGA+AGG | + | 51472:5204-5223 | MS.gene060064:CDS | 45.0% |
| ! | GGTACATTTTGAGCCTGCAA+AGG | + | 51472:1166-1185 | MS.gene060064:CDS | 45.0% |
| ! | TGAATGTGGTTTGGCTGAAC+AGG | + | 51472:860-879 | MS.gene060064:intron | 45.0% |
| !! | AAAGGCAAGTCTTGTTCTGG+AGG | - | 51472:4067-4086 | MS.gene060064:intergenic | 45.0% |
| !! | AAGGCAAGTCTTGTTCTGGA+GGG | - | 51472:4066-4085 | MS.gene060064:intergenic | 45.0% |
| !! | GACTTGAGAAAGGCATCAAC+AGG | - | 51472:5688-5707 | MS.gene060064:intergenic | 45.0% |
| !! | GCCGAATTAGAGGTATTCGT+AGG | - | 51472:738-757 | MS.gene060064:intergenic | 45.0% |
| !! | TACCTTCTGGAATCCTTTGC+AGG | - | 51472:1182-1201 | MS.gene060064:intergenic | 45.0% |
| !!! | AGGCCTTTTGGAATTGGTCT+TGG | + | 51472:4924-4943 | MS.gene060064:intron | 45.0% |
| !!! | GGCCTTTTGGAATTGGTCTT+GGG | + | 51472:4925-4944 | MS.gene060064:intron | 45.0% |
| !! | AAATATATAAGTTTATAAAA+TGG | + | 51472:1466-1485 | MS.gene060064:intron | 5.0% |
| !! | AATATATAAAATATTAATTG+GGG | - | 51472:5635-5654 | MS.gene060064:intergenic | 5.0% |
| !! | ATTATAATTGAAATATTTAA+AGG | - | 51472:6227-6246 | MS.gene060064:intergenic | 5.0% |
| !! | TTAAATATTTCAATTATAAT+TGG | + | 51472:6227-6246 | MS.gene060064:intron | 5.0% |
| AATACAACGTGGGTGCAGGA+TGG | + | 51472:4022-4041 | MS.gene060064:intron | 50.0% | |
| AATGTTAACCAGTGCCCACC+CGG | + | 51472:2127-2146 | MS.gene060064:intron | 50.0% | |
| ACGCCACAATGTAACAGACG+CGG | - | 51472:1722-1741 | MS.gene060064:intergenic | 50.0% | |
| AGAAGGGAGTTAGGGCACAT+TGG | - | 51472:6297-6316 | MS.gene060064:intergenic | 50.0% | |
| AGCCACATGAACACTGCACT+TGG | + | 51472:5282-5301 | MS.gene060064:CDS | 50.0% | |
| AGCCTGCAAAGGATTCCAGA+AGG | + | 51472:1177-1196 | MS.gene060064:CDS | 50.0% | |
| AGGGGTCCAATGAGACATGT+CGG | - | 51472:4153-4172 | MS.gene060064:intergenic | 50.0% | |
| CACCAAGTGCAGTGTTCATG+TGG | - | 51472:5287-5306 | MS.gene060064:intergenic | 50.0% | |
| GACAAATTGGACGACTGCAG+TGG | - | 51472:945-964 | MS.gene060064:intergenic | 50.0% | |
| GACTTCCTTAACCAGTGTCC+GGG | + | 51472:2254-2273 | MS.gene060064:intron | 50.0% | |
| GCTTCAAGTCGTGTCTCCTT+TGG | + | 51472:601-620 | MS.gene060064:CDS | 50.0% | |
| GGATATGTCGGACAACCACA+AGG | + | 51472:1024-1043 | MS.gene060064:intron | 50.0% | |
| GTTAGCCCTCCTTTGGATGA+AGG | + | 51472:640-659 | MS.gene060064:CDS | 50.0% | |
| TAGTCGCCGACATGTCTCAT+TGG | + | 51472:4144-4163 | MS.gene060064:CDS | 50.0% | |
| TGACCCTTAACAAGTGTCCC+GGG | - | 51472:2148-2167 | MS.gene060064:intergenic | 50.0% | |
| TGGTGGGACTAGGAAACAAC+CGG | + | 51472:1218-1237 | MS.gene060064:CDS | 50.0% | |
| ! | GATTTGACGGGCCGAATTAG+AGG | - | 51472:748-767 | MS.gene060064:intergenic | 50.0% |
| ! | TGTGGTTTGGCTGAACAGGT+TGG | + | 51472:864-883 | MS.gene060064:intron | 50.0% |
| !! | GGTCTTGTTAACCAGTGTCC+CGG | - | 51472:2275-2294 | MS.gene060064:intergenic | 50.0% |
| ACTGGAAGGCTGTGTTTGGC+AGG | + | 51472:5170-5189 | MS.gene060064:intron | 55.0% | |
| ATGGCAGGGCTGCATAATCG+AGG | - | 51472:3880-3899 | MS.gene060064:intergenic | 55.0% | |
| ATGTTAACCAGTGCCCACCC+GGG | + | 51472:2128-2147 | MS.gene060064:intron | 55.0% | |
| CCTTAACAAGTGTCCCGGGT+GGG | - | 51472:2144-2163 | MS.gene060064:intergenic | 55.0% | |
| CTGGAAGGCTGTGTTTGGCA+GGG | + | 51472:5171-5190 | MS.gene060064:intron | 55.0% | |
| GGGAGTTAGGGCACATTGGT+CGG | - | 51472:6293-6312 | MS.gene060064:intergenic | 55.0% | |
| TTAACCAGTGTCCCGGACAC+TGG | - | 51472:2268-2287 | MS.gene060064:intergenic | 55.0% | |
| TTAACCAGTGTCCGGGACAC+TGG | + | 51472:2261-2280 | MS.gene060064:intron | 55.0% | |
| ! | AGTGTCCCGGACACTGGTTA+AGG | - | 51472:2262-2281 | MS.gene060064:intergenic | 55.0% |
| ! | CCACCCGGGACACTTGTTAA+GGG | + | 51472:2142-2161 | MS.gene060064:intron | 55.0% |
| CCCTTAACAAGTGTCCCGGG+TGG | - | 51472:2145-2164 | MS.gene060064:intergenic | 60.0% | |
| GGGTGCAGGATGGCATGACA+TGG | + | 51472:4032-4051 | MS.gene060064:intron | 60.0% | |
| ! | CCCACCCGGGACACTTGTTA+AGG | + | 51472:2141-2160 | MS.gene060064:intron | 60.0% |
| CAAGTGTCCCGGGTGGGCAC+TGG | - | 51472:2138-2157 | MS.gene060064:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51472 | gene | 526 | 6822 | 526 | ID=MS.gene060064 |
| 51472 | mRNA | 526 | 6822 | 526 | ID=MS.gene060064.t1;Parent=MS.gene060064 |
| 51472 | exon | 526 | 714 | 526 | ID=MS.gene060064.t1.exon1;Parent=MS.gene060064.t1 |
| 51472 | CDS | 526 | 714 | 526 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 1150 | 1266 | 1150 | ID=MS.gene060064.t1.exon2;Parent=MS.gene060064.t1 |
| 51472 | CDS | 1150 | 1266 | 1150 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 4040 | 4180 | 4040 | ID=MS.gene060064.t1.exon3;Parent=MS.gene060064.t1 |
| 51472 | CDS | 4040 | 4180 | 4040 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 4926 | 5036 | 4926 | ID=MS.gene060064.t1.exon4;Parent=MS.gene060064.t1 |
| 51472 | CDS | 4926 | 5036 | 4926 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 5192 | 5335 | 5192 | ID=MS.gene060064.t1.exon5;Parent=MS.gene060064.t1 |
| 51472 | CDS | 5192 | 5335 | 5192 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 5535 | 5575 | 5535 | ID=MS.gene060064.t1.exon6;Parent=MS.gene060064.t1 |
| 51472 | CDS | 5535 | 5575 | 5535 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 5681 | 5760 | 5681 | ID=MS.gene060064.t1.exon7;Parent=MS.gene060064.t1 |
| 51472 | CDS | 5681 | 5760 | 5681 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 5855 | 5950 | 5855 | ID=MS.gene060064.t1.exon8;Parent=MS.gene060064.t1 |
| 51472 | CDS | 5855 | 5950 | 5855 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| 51472 | exon | 6497 | 6822 | 6497 | ID=MS.gene060064.t1.exon9;Parent=MS.gene060064.t1 |
| 51472 | CDS | 6497 | 6822 | 6497 | ID=cds.MS.gene060064.t1;Parent=MS.gene060064.t1 |
| Gene Sequence |
| Protein sequence |
