Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030339.t1 | XP_003620756.1 | 97.9 | 423 | 9 | 0 | 1 | 423 | 1 | 423 | 1.00E-236 | 828.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030339.t1 | G7KQI0 | 97.9 | 423 | 9 | 0 | 1 | 423 | 1 | 423 | 7.5e-237 | 828.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030339 | MS.gene020244 | PPI |
| MS.gene030339 | MS.gene020029 | PPI |
| MS.gene030339 | MS.gene022718 | PPI |
| MS.gene030339 | MS.gene35250 | PPI |
| MS.gene030339 | MS.gene35251 | PPI |
| MS.gene030339 | MS.gene39331 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030339.t1 | MTR_6g090060 | 97.872 | 423 | 9 | 0 | 1 | 423 | 1 | 423 | 0.0 | 860 |
| MS.gene030339.t1 | MTR_3g110630 | 51.724 | 464 | 168 | 11 | 1 | 420 | 1 | 452 | 7.50e-145 | 420 |
| MS.gene030339.t1 | MTR_8g102270 | 58.356 | 365 | 112 | 6 | 64 | 419 | 26 | 359 | 5.92e-137 | 397 |
| MS.gene030339.t1 | MTR_5g005420 | 42.377 | 446 | 194 | 13 | 1 | 414 | 1 | 415 | 2.31e-95 | 292 |
| MS.gene030339.t1 | MTR_8g009770 | 38.864 | 440 | 228 | 10 | 1 | 412 | 1 | 427 | 2.26e-84 | 265 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030339.t1 | AT4G29310 | 65.589 | 433 | 128 | 9 | 1 | 422 | 1 | 423 | 0.0 | 551 |
| MS.gene030339.t1 | AT4G29310 | 64.350 | 331 | 102 | 7 | 1 | 322 | 1 | 324 | 5.80e-146 | 418 |
| MS.gene030339.t1 | AT1G10020 | 49.254 | 469 | 175 | 12 | 1 | 417 | 1 | 458 | 1.34e-132 | 389 |
| MS.gene030339.t1 | AT3G19680 | 43.089 | 492 | 204 | 10 | 1 | 420 | 1 | 488 | 5.09e-107 | 325 |
| MS.gene030339.t1 | AT1G50040 | 41.901 | 463 | 208 | 10 | 1 | 414 | 1 | 451 | 4.66e-93 | 288 |
| MS.gene030339.t1 | AT5G17640 | 38.140 | 430 | 227 | 9 | 1 | 404 | 1 | 417 | 5.60e-83 | 261 |
Find 101 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCAGAGCTGGTGGTTTC+AGG | 0.225806 | 6.4:-62198729 | None:intergenic |
| TGTTGGTGATGGAAGGTTTA+GGG | 0.274468 | 6.4:-62198580 | None:intergenic |
| ATCCACAATGAATGTGAAAA+AGG | 0.295332 | 6.4:+62202470 | MS.gene030339:CDS |
| TTGTTGGTGATGGAAGGTTT+AGG | 0.311492 | 6.4:-62198581 | None:intergenic |
| GTGGTTTGAGAAGGGAAATT+TGG | 0.319386 | 6.4:-62198672 | None:intergenic |
| CTCGGGTTCATTTCGTGGTT+CGG | 0.344710 | 6.4:+62198991 | MS.gene030339:CDS |
| TGCTGCTATTGATCTTAGTA+TGG | 0.353674 | 6.4:+62202683 | MS.gene030339:CDS |
| AGTATTATGGATTGTGTTCA+AGG | 0.354254 | 6.4:+62202529 | MS.gene030339:CDS |
| TTGCAAACACTCCTAGTAGA+TGG | 0.381223 | 6.4:+62202136 | MS.gene030339:CDS |
| CATTATAATCAATGCAGAAT+TGG | 0.384100 | 6.4:-62202497 | None:intergenic |
| AATGTTATGAAAGAGTATTA+TGG | 0.388839 | 6.4:+62202516 | MS.gene030339:CDS |
| TTCATTGTGGATTCAGCTAT+AGG | 0.393565 | 6.4:-62202459 | None:intergenic |
| CTACTCACTGAGGCGCCGTT+TGG | 0.396234 | 6.4:-62202339 | None:intergenic |
| CAAGGTTACCACCAGGTAAA+GGG | 0.410973 | 6.4:+62202547 | MS.gene030339:CDS |
| CATGGTATTGTTGTTGTTGA+AGG | 0.422188 | 6.4:-62198630 | None:intergenic |
| TGTGCACCAACTTGCACAAA+AGG | 0.427169 | 6.4:-62202615 | None:intergenic |
| CGAGCCGAATCCTTCTTTCC+CGG | 0.431922 | 6.4:-62198972 | None:intergenic |
| GTCTGTGTATGCTGGAAGCA+TGG | 0.433665 | 6.4:+62198815 | MS.gene030339:CDS |
| ACCATTGAGGCTGCAGCAAC+CGG | 0.435726 | 6.4:-62202243 | None:intergenic |
| CACACCATTTGTCCCATCCC+CGG | 0.436841 | 6.4:+62202266 | MS.gene030339:CDS |
| ATCACAAGTTCGAAGCTCTT+AGG | 0.455739 | 6.4:+62198852 | MS.gene030339:CDS |
| TTCGGCTCGGGTTCATTTCG+TGG | 0.456979 | 6.4:+62198986 | MS.gene030339:CDS |
| AAGAGGTCATGTAGATGGCT+TGG | 0.464790 | 6.4:+62202398 | MS.gene030339:CDS |
| ACACTCCTAGTAGATGGAAA+AGG | 0.466520 | 6.4:+62202142 | MS.gene030339:CDS |
| TTACGTTTGTCTGTGTATGC+TGG | 0.471252 | 6.4:+62198807 | MS.gene030339:CDS |
| CTCTGTCTGAGCCCGGGGAT+GGG | 0.471475 | 6.4:-62202278 | None:intergenic |
| CAGTTATGTTTCATAGTGGA+TGG | 0.475543 | 6.4:+62198919 | MS.gene030339:CDS |
| CTTGATACTCTGTCTGAGCC+CGG | 0.475731 | 6.4:-62202285 | None:intergenic |
| TCAAGGTTACCACCAGGTAA+AGG | 0.476377 | 6.4:+62202546 | MS.gene030339:CDS |
| CATACACAGACAAACGTAAA+GGG | 0.477099 | 6.4:-62198803 | None:intergenic |
| AGGGTTTGAACCGGGAAAGA+AGG | 0.477281 | 6.4:+62198962 | MS.gene030339:CDS |
| ACGGCGCCTCAGTGAGTAGC+TGG | 0.485041 | 6.4:+62202343 | MS.gene030339:CDS |
| CACTCCTAGTAGATGGAAAA+GGG | 0.485668 | 6.4:+62202143 | MS.gene030339:CDS |
| GTGATGAGTTCTAGTGTTGA+AGG | 0.486355 | 6.4:+62202573 | MS.gene030339:CDS |
| ACCGGTTGCTGCAGCCTCAA+TGG | 0.487378 | 6.4:+62202242 | MS.gene030339:CDS |
| ACACCATTTGTCCCATCCCC+GGG | 0.490416 | 6.4:+62202267 | MS.gene030339:CDS |
| ACTCTGTCTGAGCCCGGGGA+TGG | 0.491390 | 6.4:-62202279 | None:intergenic |
| CATAGTGGATGGCTTGTGTT+GGG | 0.492304 | 6.4:+62198930 | MS.gene030339:CDS |
| TTGATACTCTGTCTGAGCCC+GGG | 0.494151 | 6.4:-62202284 | None:intergenic |
| TCAACTGTTAGACGTACAAA+TGG | 0.494581 | 6.4:-62198549 | None:intergenic |
| AGAGGTCATGTAGATGGCTT+GGG | 0.495477 | 6.4:+62202399 | MS.gene030339:CDS |
| GGAAGAAGTGTGGTTTGAGA+AGG | 0.497031 | 6.4:-62198681 | None:intergenic |
| CGAAGAATTAGCCATGCGCC+GGG | 0.497196 | 6.4:-62202315 | None:intergenic |
| AGAGAAAGAGGTCATGTAGA+TGG | 0.497449 | 6.4:+62202393 | MS.gene030339:CDS |
| GCGTCACGGACGAGAAAGAA+AGG | 0.497933 | 6.4:+62202185 | MS.gene030339:CDS |
| GTGGAAACCATCAGCAGAGC+TGG | 0.500398 | 6.4:-62198739 | None:intergenic |
| ATAACAGTTCACGATCTCTC+TGG | 0.506176 | 6.4:+62202216 | MS.gene030339:CDS |
| TGAACCGGGAAAGAAGGATT+CGG | 0.506902 | 6.4:+62198968 | MS.gene030339:CDS |
| CGTTCAGTTATGTTTCATAG+TGG | 0.509446 | 6.4:+62198915 | MS.gene030339:CDS |
| TCACGATCTCTCTGGTTCAC+CGG | 0.513554 | 6.4:+62202224 | MS.gene030339:CDS |
| GAGCCCGGGGATGGGACAAA+TGG | 0.513648 | 6.4:-62202270 | None:intergenic |
| TCATAGTGGATGGCTTGTGT+TGG | 0.515970 | 6.4:+62198929 | MS.gene030339:CDS |
| AGGGAAATTTGGTATATGAA+TGG | 0.516982 | 6.4:-62198661 | None:intergenic |
| AAAACCACCGGACTACATTC+CGG | 0.522926 | 6.4:-62199056 | None:intergenic |
| TCAAGAGAATATTAGACAGC+CGG | 0.523927 | 6.4:+62199085 | MS.gene030339:CDS |
| GAAGAAGTGTGGTTTGAGAA+GGG | 0.529695 | 6.4:-62198680 | None:intergenic |
| GGGAAAGAAGGATTCGGCTC+GGG | 0.533415 | 6.4:+62198974 | MS.gene030339:CDS |
| AATGCACTCCAGCGTCTCAC+AGG | 0.544235 | 6.4:+62198771 | MS.gene030339:CDS |
| GATGAAGATGATGAAGAGAG+TGG | 0.546238 | 6.4:-62198702 | None:intergenic |
| TGGCTAATTCTTCGTCCAAA+CGG | 0.547768 | 6.4:+62202324 | MS.gene030339:CDS |
| CAGTGAGTAGCTGGAAACCA+TGG | 0.547889 | 6.4:+62202352 | MS.gene030339:CDS |
| TTAGAAGCATGGAGAGAAAG+AGG | 0.550587 | 6.4:+62202381 | MS.gene030339:CDS |
| CTGATCGAAATTCTAGATCA+AGG | 0.551265 | 6.4:+62199129 | MS.gene030339:CDS |
| AGGTGAACCGGAATGTAGTC+CGG | 0.552686 | 6.4:+62199049 | MS.gene030339:CDS |
| AGTGAGTAGCTGGAAACCAT+GGG | 0.554092 | 6.4:+62202353 | MS.gene030339:CDS |
| CAAGATCAAACCCCGGCGCA+TGG | 0.560299 | 6.4:+62202304 | MS.gene030339:CDS |
| TAGGTTTGCCTGTGAGACGC+TGG | 0.562906 | 6.4:-62198779 | None:intergenic |
| TGCACAACATGTTACATGTA+TGG | 0.563106 | 6.4:+62202632 | MS.gene030339:CDS |
| GCATACACAGACAAACGTAA+AGG | 0.564070 | 6.4:-62198804 | None:intergenic |
| ACGAAGAATTAGCCATGCGC+CGG | 0.565487 | 6.4:-62202316 | None:intergenic |
| CTCATCACAAACCCTTTACC+TGG | 0.570924 | 6.4:-62202558 | None:intergenic |
| CATGGGGACGTTTAGAAGCA+TGG | 0.571889 | 6.4:+62202370 | MS.gene030339:CDS |
| TGTGAGACGCTGGAGTGCAT+TGG | 0.575230 | 6.4:-62198769 | None:intergenic |
| ACAGACAAACGTAAAGGGAT+AGG | 0.577754 | 6.4:-62198798 | None:intergenic |
| GCTGGAGTGCATTGGAGTCG+AGG | 0.584687 | 6.4:-62198761 | None:intergenic |
| GAACTCGTAACCGAAAATAA+CGG | 0.585112 | 6.4:+62202432 | MS.gene030339:CDS |
| AGTTCTAGTGTTGAAGGTGA+AGG | 0.591958 | 6.4:+62202579 | MS.gene030339:CDS |
| TCTGTGTATGCTGGAAGCAT+GGG | 0.592421 | 6.4:+62198816 | MS.gene030339:CDS |
| TGAAGAGAGTGGAAGAAGTG+TGG | 0.595218 | 6.4:-62198691 | None:intergenic |
| GAAACCACCAGCTCTGCTGA+TGG | 0.597345 | 6.4:+62198732 | MS.gene030339:CDS |
| CGGGAAAGAAGGATTCGGCT+CGG | 0.598341 | 6.4:+62198973 | MS.gene030339:CDS |
| GAAGGATGAATACGTGAAAG+TGG | 0.601146 | 6.4:-62198612 | None:intergenic |
| TTCGGTCTGAACCAGATCCA+CGG | 0.603505 | 6.4:+62199009 | MS.gene030339:CDS |
| ACGGACGAGAAAGAAAGGGT+TGG | 0.607719 | 6.4:+62202190 | MS.gene030339:CDS |
| TGATACTCTGTCTGAGCCCG+GGG | 0.608826 | 6.4:-62202283 | None:intergenic |
| GGAAGCATGGGTCGAACTTG+TGG | 0.617042 | 6.4:+62198828 | MS.gene030339:CDS |
| CGTCACGGACGAGAAAGAAA+GGG | 0.630621 | 6.4:+62202186 | MS.gene030339:CDS |
| GAAACCATCAGCAGAGCTGG+TGG | 0.633877 | 6.4:-62198736 | None:intergenic |
| CATGCTTCTAAACGTCCCCA+TGG | 0.635204 | 6.4:-62202369 | None:intergenic |
| TGAATACGTGAAAGTGGTGA+TGG | 0.640926 | 6.4:-62198606 | None:intergenic |
| TTGTGTTCAAGGTTACCACC+AGG | 0.654136 | 6.4:+62202540 | MS.gene030339:CDS |
| AAAAGTGTTCAAGAGCGTCA+CGG | 0.669596 | 6.4:+62202171 | MS.gene030339:CDS |
| GGAGTGCATTGGAGTCGAGG+TGG | 0.675035 | 6.4:-62198758 | None:intergenic |
| ATCACAAACCCTTTACCTGG+TGG | 0.684939 | 6.4:-62202555 | None:intergenic |
| TGAACCGGAATGTAGTCCGG+TGG | 0.695792 | 6.4:+62199052 | MS.gene030339:CDS |
| GACAAATGGTGTGACCATTG+AGG | 0.703421 | 6.4:-62202256 | None:intergenic |
| AGAGTATCAAGATCAAACCC+CGG | 0.719340 | 6.4:+62202297 | MS.gene030339:CDS |
| GAAGAATTAGCCATGCGCCG+GGG | 0.725892 | 6.4:-62202314 | None:intergenic |
| GTGAGTAGCTGGAAACCATG+GGG | 0.739154 | 6.4:+62202354 | MS.gene030339:CDS |
| GATCAATATTAACAACAACA+CGG | 0.741783 | 6.4:-62198875 | None:intergenic |
| TGGTTTCCAGCTACTCACTG+AGG | 0.744962 | 6.4:-62202349 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTATCATATTATTAAA+AGG | + | chr6.4:62199512-62199531 | MS.gene030339:intron | 10.0% |
| !! | TTAATTAACAAAGATAATTA+TGG | + | chr6.4:62200209-62200228 | MS.gene030339:intron | 10.0% |
| !!! | AAAAATACTTAGTTTAAAAT+TGG | - | chr6.4:62201374-62201393 | None:intergenic | 10.0% |
| !!! | GTTAATTAATTTTTTTTTGA+AGG | - | chr6.4:62200198-62200217 | None:intergenic | 10.0% |
| !! | AAACATAATAATTTAGTAGT+TGG | - | chr6.4:62201530-62201549 | None:intergenic | 15.0% |
| !! | ATCATATTATTAAAAGGAAA+AGG | + | chr6.4:62199518-62199537 | MS.gene030339:intron | 15.0% |
| !! | ATTAAAAAGAGTTTAATGAT+GGG | - | chr6.4:62200914-62200933 | None:intergenic | 15.0% |
| !! | TATCTCTATTAAACATATTT+AGG | + | chr6.4:62201046-62201065 | MS.gene030339:intron | 15.0% |
| !! | TATTAAAAAGAGTTTAATGA+TGG | - | chr6.4:62200915-62200934 | None:intergenic | 15.0% |
| !! | TTAAATTTATAAATCTACCA+TGG | - | chr6.4:62199222-62199241 | None:intergenic | 15.0% |
| !!! | ACGATTTTAAATATTTTGAT+TGG | - | chr6.4:62200815-62200834 | None:intergenic | 15.0% |
| !!! | ATCAATTTTTTTTATCTTTC+AGG | + | chr6.4:62202097-62202116 | MS.gene030339:intron | 15.0% |
| !!! | ATTAGTGTTTTTAATTTATG+TGG | + | chr6.4:62200842-62200861 | MS.gene030339:intron | 15.0% |
| !!! | TTTTATGTTGGTTAAAAAAA+GGG | + | chr6.4:62199548-62199567 | MS.gene030339:intron | 15.0% |
| !! | AAAAAAAAAACCAGAATTTG+AGG | - | chr6.4:62201080-62201099 | None:intergenic | 20.0% |
| !! | AAAAAAAAACCAGAATTTGA+GGG | - | chr6.4:62201079-62201098 | None:intergenic | 20.0% |
| !! | AATTGTACCATATCATATTA+TGG | + | chr6.4:62200740-62200759 | MS.gene030339:intron | 20.0% |
| !! | ATTAACAAAGATAATTATGG+TGG | + | chr6.4:62200212-62200231 | MS.gene030339:intron | 20.0% |
| !! | CACATTTATGATATGTTATA+TGG | - | chr6.4:62201223-62201242 | None:intergenic | 20.0% |
| !! | CACTATCAGAAAAAATTAAA+TGG | + | chr6.4:62199489-62199508 | MS.gene030339:intron | 20.0% |
| !! | TATAAACCAATGACAAAAAT+CGG | + | chr6.4:62201852-62201871 | MS.gene030339:intron | 20.0% |
| !!! | AATTATGACTTTGATGATTA+AGG | + | chr6.4:62200653-62200672 | MS.gene030339:intron | 20.0% |
| !!! | AATTTGACCATTTTTTTAAG+GGG | - | chr6.4:62199845-62199864 | None:intergenic | 20.0% |
| !!! | AGAATTTGACCATTTTTTTA+AGG | - | chr6.4:62199847-62199866 | None:intergenic | 20.0% |
| !!! | CTAATTTAAAGTAAAATCCA+TGG | + | chr6.4:62201284-62201303 | MS.gene030339:intron | 20.0% |
| !!! | CTTTTATGTTGGTTAAAAAA+AGG | + | chr6.4:62199547-62199566 | MS.gene030339:intron | 20.0% |
| !!! | GAATTTGACCATTTTTTTAA+GGG | - | chr6.4:62199846-62199865 | None:intergenic | 20.0% |
| !!! | TTAAATATTTTGATTGGTTG+TGG | - | chr6.4:62200809-62200828 | None:intergenic | 20.0% |
| !!! | TTTATGTTGGTTAAAAAAAG+GGG | + | chr6.4:62199549-62199568 | MS.gene030339:intron | 20.0% |
| !!! | TTTATTTTTTGTGTTCACAT+TGG | + | chr6.4:62199255-62199274 | MS.gene030339:intron | 20.0% |
| ! | AAAAATCGAATCAAACGATT+TGG | + | chr6.4:62199290-62199309 | MS.gene030339:intron | 25.0% |
| ! | AATCATCAAAGTCATAATTG+AGG | - | chr6.4:62200652-62200671 | None:intergenic | 25.0% |
| ! | ACCTGATTAAATGACATATA+TGG | - | chr6.4:62200372-62200391 | None:intergenic | 25.0% |
| ! | ACTAATTCCCCTTAAAAAAA+TGG | + | chr6.4:62199835-62199854 | MS.gene030339:intron | 25.0% |
| ! | ATCATCAAAGTCATAATTGA+GGG | - | chr6.4:62200651-62200670 | None:intergenic | 25.0% |
| ! | ATGTACATAGTTTAAGCTTA+TGG | + | chr6.4:62200311-62200330 | MS.gene030339:intron | 25.0% |
| ! | CAAATGAAATGAGTACAAAA+TGG | - | chr6.4:62200470-62200489 | None:intergenic | 25.0% |
| ! | CATTATAATCAATGCAGAAT+TGG | - | chr6.4:62202500-62202519 | None:intergenic | 25.0% |
| ! | CTAAATTTGCAACTAAAAAC+CGG | - | chr6.4:62199107-62199126 | None:intergenic | 25.0% |
| ! | GAGAAGTTTCTGTTTATTTA+AGG | - | chr6.4:62201265-62201284 | None:intergenic | 25.0% |
| ! | GATCAATATTAACAACAACA+CGG | - | chr6.4:62198878-62198897 | None:intergenic | 25.0% |
| ! | GATTAAATGACATATATGGT+AGG | - | chr6.4:62200368-62200387 | None:intergenic | 25.0% |
| ! | GTTTACACCATAATATGATA+TGG | - | chr6.4:62200750-62200769 | None:intergenic | 25.0% |
| ! | TAATACAAAACTTGTGGATA+GGG | - | chr6.4:62200607-62200626 | None:intergenic | 25.0% |
| ! | TGTACATAGTTTAAGCTTAT+GGG | + | chr6.4:62200312-62200331 | MS.gene030339:intron | 25.0% |
| ! | TTACAATTTATCTGCATTCA+GGG | - | chr6.4:62199622-62199641 | None:intergenic | 25.0% |
| ! | TTTACAATTTATCTGCATTC+AGG | - | chr6.4:62199623-62199642 | None:intergenic | 25.0% |
| !! | AAAGGAAAATGCTTTTATGT+TGG | + | chr6.4:62199536-62199555 | MS.gene030339:intron | 25.0% |
| !! | ACCATATATGTCATTTAATC+AGG | + | chr6.4:62200368-62200387 | MS.gene030339:intron | 25.0% |
| !! | CATTTTGTACTCATTTCATT+TGG | + | chr6.4:62200468-62200487 | MS.gene030339:intron | 25.0% |
| !! | CTGTTTATTTAAGGTTGAAA+AGG | - | chr6.4:62201256-62201275 | None:intergenic | 25.0% |
| !! | GAACAAATTTCTTTTCCATA+AGG | + | chr6.4:62202756-62202775 | MS.gene030339:CDS | 25.0% |
| !! | GTGGGTTAATTAATTAACTA+TGG | + | chr6.4:62200274-62200293 | MS.gene030339:intron | 25.0% |
| !! | TGATATCTTCATTAGTTCTT+TGG | - | chr6.4:62200156-62200175 | None:intergenic | 25.0% |
| !! | TTTGACACAACTAATTTTGT+AGG | + | chr6.4:62201808-62201827 | MS.gene030339:intron | 25.0% |
| !! | TTTTTCCCACTTATTCTTTA+AGG | + | chr6.4:62201389-62201408 | MS.gene030339:intron | 25.0% |
| !!! | ATTTTTTCACAAGGACATAA+AGG | - | chr6.4:62201422-62201441 | None:intergenic | 25.0% |
| !!! | CAATAGTCACTTTTAACTAT+TGG | - | chr6.4:62199386-62199405 | None:intergenic | 25.0% |
| !!! | TATAGGTATTCCGTTATTTT+CGG | - | chr6.4:62202445-62202464 | None:intergenic | 25.0% |
| !!! | TTTTTATCTTTCAGGTCTAA+TGG | + | chr6.4:62202105-62202124 | MS.gene030339:intron | 25.0% |
| AAAAAAGAAAGGGTTTGAAC+CGG | + | chr6.4:62198953-62198972 | MS.gene030339:CDS | 30.0% | |
| AAGTCCACTCATTTAAAAAC+AGG | + | chr6.4:62201458-62201477 | MS.gene030339:intron | 30.0% | |
| ACATCACTACATGACAATAA+AGG | + | chr6.4:62199891-62199910 | MS.gene030339:intron | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr6.4:62199651-62199670 | None:intergenic | 30.0% | |
| ACTATGATACATAACTGTCA+TGG | + | chr6.4:62201622-62201641 | MS.gene030339:intron | 30.0% | |
| AGAGACATATGAAAATCGAA+CGG | - | chr6.4:62202072-62202091 | None:intergenic | 30.0% | |
| AGGGAAATTTGGTATATGAA+TGG | - | chr6.4:62198664-62198683 | None:intergenic | 30.0% | |
| ATATGAATGGTGCAAAAACA+TGG | - | chr6.4:62198651-62198670 | None:intergenic | 30.0% | |
| ATCCACAATGAATGTGAAAA+AGG | + | chr6.4:62202470-62202489 | MS.gene030339:CDS | 30.0% | |
| CTAATACAAAACTTGTGGAT+AGG | - | chr6.4:62200608-62200627 | None:intergenic | 30.0% | |
| CTTTCTATGGTTTAGTTATC+TGG | + | chr6.4:62199340-62199359 | MS.gene030339:intron | 30.0% | |
| CTTTGCTTGTCAATATCTTT+AGG | + | chr6.4:62200335-62200354 | MS.gene030339:intron | 30.0% | |
| GACAGTTATGTATCATAGTT+TGG | - | chr6.4:62201621-62201640 | None:intergenic | 30.0% | |
| GAGTACCTTAAAGAATAAGT+GGG | - | chr6.4:62201397-62201416 | None:intergenic | 30.0% | |
| GTTGCATATATAACCAGATT+TGG | + | chr6.4:62201572-62201591 | MS.gene030339:intron | 30.0% | |
| TCCACAATGAATGTGAAAAA+GGG | + | chr6.4:62202471-62202490 | MS.gene030339:CDS | 30.0% | |
| TGAGTACCTTAAAGAATAAG+TGG | - | chr6.4:62201398-62201417 | None:intergenic | 30.0% | |
| TTAATCTTAAAGAGTCTCTG+AGG | - | chr6.4:62200960-62200979 | None:intergenic | 30.0% | |
| TTAATTAACCCACCATAATG+TGG | - | chr6.4:62200267-62200286 | None:intergenic | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr6.4:62199772-62199791 | MS.gene030339:intron | 30.0% | |
| TTGTGTTGGGAAAAAAGAAA+GGG | + | chr6.4:62198943-62198962 | MS.gene030339:CDS | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr6.4:62199771-62199790 | MS.gene030339:intron | 30.0% | |
| ! | AGCTTTTCTCTCATAAACTT+AGG | + | chr6.4:62202715-62202734 | MS.gene030339:CDS | 30.0% |
| ! | GTGTCAAGTAAACATGTTTT+TGG | - | chr6.4:62200550-62200569 | None:intergenic | 30.0% |
| ! | TTACGTATGCAAAGTTGTTT+TGG | + | chr6.4:62200887-62200906 | MS.gene030339:intron | 30.0% |
| !! | AGTGGACTTTAATTTGAAAG+GGG | - | chr6.4:62201447-62201466 | None:intergenic | 30.0% |
| !! | ATCAAACGATTTGGTTAAAG+CGG | + | chr6.4:62199299-62199318 | MS.gene030339:intron | 30.0% |
| !! | CTATCCACAAGTTTTGTATT+AGG | + | chr6.4:62200606-62200625 | MS.gene030339:intron | 30.0% |
| !! | GAGTGGACTTTAATTTGAAA+GGG | - | chr6.4:62201448-62201467 | None:intergenic | 30.0% |
| !! | GATTCGATTTTTAAAGAGTG+TGG | - | chr6.4:62199282-62199301 | None:intergenic | 30.0% |
| !! | TCTTTGTTTGTTTCTGTTTC+TGG | + | chr6.4:62200512-62200531 | MS.gene030339:intron | 30.0% |
| !! | TGAGTGGACTTTAATTTGAA+AGG | - | chr6.4:62201449-62201468 | None:intergenic | 30.0% |
| !!! | AAAGGGGAAATTTTTTCACA+AGG | - | chr6.4:62201431-62201450 | None:intergenic | 30.0% |
| !!! | GCAATTCAGAATGTTTTGAT+TGG | + | chr6.4:62200864-62200883 | MS.gene030339:intron | 30.0% |
| !!! | TGAACCTGTTTTTAAATGAG+TGG | - | chr6.4:62201465-62201484 | None:intergenic | 30.0% |
| AAAAAGAAAGGGTTTGAACC+GGG | + | chr6.4:62198954-62198973 | MS.gene030339:CDS | 35.0% | |
| AAGCTTTGCACACTTTCAAT+GGG | + | chr6.4:62200683-62200702 | MS.gene030339:intron | 35.0% | |
| ACAATGAATGTGAAAAAGGG+TGG | + | chr6.4:62202474-62202493 | MS.gene030339:CDS | 35.0% | |
| ACAGCCTAATACAAAACTTG+TGG | - | chr6.4:62200613-62200632 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | - | chr6.4:62199715-62199734 | None:intergenic | 35.0% | |
| AGCAGACTCAATATCTCATA+CGG | + | chr6.4:62201672-62201691 | MS.gene030339:intron | 35.0% | |
| AGGCTCAATAATAATTCCCA+TGG | - | chr6.4:62199946-62199965 | None:intergenic | 35.0% | |
| ATTAAGACAGACTCAAGACT+CGG | + | chr6.4:62200975-62200994 | MS.gene030339:intron | 35.0% | |
| ATTCTAGATCAAGGTGAGTT+TGG | + | chr6.4:62199138-62199157 | MS.gene030339:intron | 35.0% | |
| CACTTGTAAAACTAGCCAAA+TGG | - | chr6.4:62200239-62200258 | None:intergenic | 35.0% | |
| CATACACAGACAAACGTAAA+GGG | - | chr6.4:62198806-62198825 | None:intergenic | 35.0% | |
| CCAAATTGAAAAACAAACCG+TGG | - | chr6.4:62199029-62199048 | None:intergenic | 35.0% | |
| CGTTCAGTTATGTTTCATAG+TGG | + | chr6.4:62198915-62198934 | MS.gene030339:CDS | 35.0% | |
| CTGATCGAAATTCTAGATCA+AGG | + | chr6.4:62199129-62199148 | MS.gene030339:CDS | 35.0% | |
| CTTGTCAATATCTTTAGGCT+AGG | + | chr6.4:62200340-62200359 | MS.gene030339:intron | 35.0% | |
| CTTGTGTTGGGAAAAAAGAA+AGG | + | chr6.4:62198942-62198961 | MS.gene030339:CDS | 35.0% | |
| GAACTCGTAACCGAAAATAA+CGG | + | chr6.4:62202432-62202451 | MS.gene030339:CDS | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr6.4:62199652-62199671 | None:intergenic | 35.0% | |
| TCAACTGTTAGACGTACAAA+TGG | - | chr6.4:62198552-62198571 | None:intergenic | 35.0% | |
| TCAAGAGAATATTAGACAGC+CGG | + | chr6.4:62199085-62199104 | MS.gene030339:CDS | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr6.4:62199666-62199685 | None:intergenic | 35.0% | |
| TCTTGAATCTGAAAAACCAC+CGG | - | chr6.4:62199071-62199090 | None:intergenic | 35.0% | |
| TGCACAACATGTTACATGTA+TGG | + | chr6.4:62202632-62202651 | MS.gene030339:CDS | 35.0% | |
| TGCTGCTATTGATCTTAGTA+TGG | + | chr6.4:62202683-62202702 | MS.gene030339:CDS | 35.0% | |
| TTCATTGTGGATTCAGCTAT+AGG | - | chr6.4:62202462-62202481 | None:intergenic | 35.0% | |
| TTCTAACTCAGCAAAAACCA+TGG | - | chr6.4:62201304-62201323 | None:intergenic | 35.0% | |
| ! | AGTAAACCTTTTGTGCAAGT+TGG | + | chr6.4:62202609-62202628 | MS.gene030339:CDS | 35.0% |
| ! | AGTCATCCGATTTTTGTCAT+TGG | - | chr6.4:62201861-62201880 | None:intergenic | 35.0% |
| ! | CAGTTATGTTTCATAGTGGA+TGG | + | chr6.4:62198919-62198938 | MS.gene030339:CDS | 35.0% |
| ! | CATGGTATTGTTGTTGTTGA+AGG | - | chr6.4:62198633-62198652 | None:intergenic | 35.0% |
| ! | GCACGTTTGACATTTTCATT+AGG | + | chr6.4:62201716-62201735 | MS.gene030339:intron | 35.0% |
| ! | TTTTCAATTTGGAGGTGAAC+CGG | + | chr6.4:62199037-62199056 | MS.gene030339:CDS | 35.0% |
| !! | ACCCTTTTTCACATTCATTG+TGG | - | chr6.4:62202475-62202494 | None:intergenic | 35.0% |
| !! | CCACGGTTTGTTTTTCAATT+TGG | + | chr6.4:62199026-62199045 | MS.gene030339:CDS | 35.0% |
| !! | CGGTTTGTTTTTCAATTTGG+AGG | + | chr6.4:62199029-62199048 | MS.gene030339:CDS | 35.0% |
| !! | GATAATTATGGTGGACCATT+TGG | + | chr6.4:62200221-62200240 | MS.gene030339:intron | 35.0% |
| !!! | CATTTGGCTAGTTTTACAAG+TGG | + | chr6.4:62200237-62200256 | MS.gene030339:intron | 35.0% |
| ACACTCCTAGTAGATGGAAA+AGG | + | chr6.4:62202142-62202161 | MS.gene030339:CDS | 40.0% | |
| ACAGACAAACGTAAAGGGAT+AGG | - | chr6.4:62198801-62198820 | None:intergenic | 40.0% | |
| AGAGAAAGAGGTCATGTAGA+TGG | + | chr6.4:62202393-62202412 | MS.gene030339:CDS | 40.0% | |
| AGCATACTCATTCTCAACCA+TGG | + | chr6.4:62199926-62199945 | MS.gene030339:intron | 40.0% | |
| AGCGGTTAAACGATGAACTA+AGG | + | chr6.4:62199317-62199336 | MS.gene030339:intron | 40.0% | |
| ATAACAGTTCACGATCTCTC+TGG | + | chr6.4:62202216-62202235 | MS.gene030339:CDS | 40.0% | |
| ATCACAAGTTCGAAGCTCTT+AGG | + | chr6.4:62198852-62198871 | MS.gene030339:CDS | 40.0% | |
| CAAGCTTTGCACACTTTCAA+TGG | + | chr6.4:62200682-62200701 | MS.gene030339:intron | 40.0% | |
| CACTCCTAGTAGATGGAAAA+GGG | + | chr6.4:62202143-62202162 | MS.gene030339:CDS | 40.0% | |
| CGATGAACTAAGGCTTTCTA+TGG | + | chr6.4:62199327-62199346 | MS.gene030339:intron | 40.0% | |
| CTATGCAATTCATGATCACG+AGG | - | chr6.4:62201956-62201975 | None:intergenic | 40.0% | |
| CTCTATGCTAATGTTAGCCA+TGG | + | chr6.4:62199202-62199221 | MS.gene030339:intron | 40.0% | |
| CTTGTCTGTTTGACCAAATC+TGG | - | chr6.4:62201588-62201607 | None:intergenic | 40.0% | |
| GAAGGATGAATACGTGAAAG+TGG | - | chr6.4:62198615-62198634 | None:intergenic | 40.0% | |
| GACTAACGAAGTCTACATTC+AGG | - | chr6.4:62199716-62199735 | None:intergenic | 40.0% | |
| GATGAAGATGATGAAGAGAG+TGG | - | chr6.4:62198705-62198724 | None:intergenic | 40.0% | |
| GATGAGATTGAGCTGGATAA+GGG | - | chr6.4:62200417-62200436 | None:intergenic | 40.0% | |
| GCATACACAGACAAACGTAA+AGG | - | chr6.4:62198807-62198826 | None:intergenic | 40.0% | |
| GCATACTCATTCTCAACCAT+GGG | + | chr6.4:62199927-62199946 | MS.gene030339:intron | 40.0% | |
| GGTTTATGTCCCTCAAATTC+TGG | + | chr6.4:62201067-62201086 | MS.gene030339:intron | 40.0% | |
| GTGGTTTGAGAAGGGAAATT+TGG | - | chr6.4:62198675-62198694 | None:intergenic | 40.0% | |
| TATGCAAAACAGTCCCTGTA+TGG | - | chr6.4:62199759-62199778 | None:intergenic | 40.0% | |
| TCCCTGAAATTGACCATACA+GGG | + | chr6.4:62199743-62199762 | MS.gene030339:intron | 40.0% | |
| TCCCTGTATGGTCAATTTCA+GGG | - | chr6.4:62199747-62199766 | None:intergenic | 40.0% | |
| TGAAAAACAAACCGTGGATC+TGG | - | chr6.4:62199023-62199042 | None:intergenic | 40.0% | |
| TGAATACGTGAAAGTGGTGA+TGG | - | chr6.4:62198609-62198628 | None:intergenic | 40.0% | |
| TGATGAGATTGAGCTGGATA+AGG | - | chr6.4:62200418-62200437 | None:intergenic | 40.0% | |
| TGGCTAATTCTTCGTCCAAA+CGG | + | chr6.4:62202324-62202343 | MS.gene030339:CDS | 40.0% | |
| TTACGTTTGTCTGTGTATGC+TGG | + | chr6.4:62198807-62198826 | MS.gene030339:CDS | 40.0% | |
| TTGCAAACACTCCTAGTAGA+TGG | + | chr6.4:62202136-62202155 | MS.gene030339:CDS | 40.0% | |
| ! | AATGCCCTTTTCCATCTACT+AGG | - | chr6.4:62202150-62202169 | None:intergenic | 40.0% |
| ! | ACATGATGATGAGATTGAGC+TGG | - | chr6.4:62200424-62200443 | None:intergenic | 40.0% |
| ! | AGAGTATCAAGATCAAACCC+CGG | + | chr6.4:62202297-62202316 | MS.gene030339:CDS | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | - | chr6.4:62199595-62199576 | None:intergenic | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr6.4:62199576-62199595 | MS.gene030339:intron | 40.0% |
| ! | AGTTCTAGTGTTGAAGGTGA+AGG | + | chr6.4:62202579-62202598 | MS.gene030339:CDS | 40.0% |
| ! | GAAGAAGTGTGGTTTGAGAA+GGG | - | chr6.4:62198683-62198702 | None:intergenic | 40.0% |
| ! | GTCACTTTAGTCCCTGAATA+GGG | - | chr6.4:62199817-62199836 | None:intergenic | 40.0% |
| ! | GTGATGAGTTCTAGTGTTGA+AGG | + | chr6.4:62202573-62202592 | MS.gene030339:CDS | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr6.4:62199575-62199594 | MS.gene030339:intron | 40.0% |
| ! | TTAGAAGCATGGAGAGAAAG+AGG | + | chr6.4:62202381-62202400 | MS.gene030339:CDS | 40.0% |
| !! | AAAAGTGTTCAAGAGCGTCA+CGG | + | chr6.4:62202171-62202190 | MS.gene030339:CDS | 40.0% |
| !! | ACTCGAATATTGATTCCCTG+CGG | - | chr6.4:62201910-62201929 | None:intergenic | 40.0% |
| !! | TGTTGGTGATGGAAGGTTTA+GGG | - | chr6.4:62198583-62198602 | None:intergenic | 40.0% |
| !! | TTGTTGGTGATGGAAGGTTT+AGG | - | chr6.4:62198584-62198603 | None:intergenic | 40.0% |
| !!! | ATGGTTTTGTTGGTGATGGA+AGG | - | chr6.4:62198590-62198609 | None:intergenic | 40.0% |
| !!! | GAAAGTGGTGATGGTTTTGT+TGG | - | chr6.4:62198600-62198619 | None:intergenic | 40.0% |
| !!! | TTGGCTAGTTTTACAAGTGG+TGG | + | chr6.4:62200240-62200259 | MS.gene030339:intron | 40.0% |
| AAAACCACCGGACTACATTC+CGG | - | chr6.4:62199059-62199078 | None:intergenic | 45.0% | |
| AAGAGGTCATGTAGATGGCT+TGG | + | chr6.4:62202398-62202417 | MS.gene030339:CDS | 45.0% | |
| ACCAGATACTAGCACATGGT+AGG | - | chr6.4:62201652-62201671 | None:intergenic | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr6.4:62199683-62199702 | None:intergenic | 45.0% | |
| AGAGGTCATGTAGATGGCTT+GGG | + | chr6.4:62202399-62202418 | MS.gene030339:CDS | 45.0% | |
| AGTGAGTAGCTGGAAACCAT+GGG | + | chr6.4:62202353-62202372 | MS.gene030339:CDS | 45.0% | |
| ATCACAAACCCTTTACCTGG+TGG | - | chr6.4:62202558-62202577 | None:intergenic | 45.0% | |
| CAAGGTTACCACCAGGTAAA+GGG | + | chr6.4:62202547-62202566 | MS.gene030339:CDS | 45.0% | |
| CCAGATACTAGCACATGGTA+GGG | - | chr6.4:62201651-62201670 | None:intergenic | 45.0% | |
| CTCATCACAAACCCTTTACC+TGG | - | chr6.4:62202561-62202580 | None:intergenic | 45.0% | |
| GACAAATGGTGTGACCATTG+AGG | - | chr6.4:62202259-62202278 | None:intergenic | 45.0% | |
| GACGAATCGTTCCCTATTCA+GGG | + | chr6.4:62199803-62199822 | MS.gene030339:intron | 45.0% | |
| GATGAATCGTTCCCCATTCA+GGG | - | chr6.4:62199591-62199610 | None:intergenic | 45.0% | |
| GTCCCTGAAATTGACCATAC+AGG | + | chr6.4:62199742-62199761 | MS.gene030339:intron | 45.0% | |
| GTCCCTGTATGGTCAATTTC+AGG | - | chr6.4:62199748-62199767 | None:intergenic | 45.0% | |
| TCAAGGTTACCACCAGGTAA+AGG | + | chr6.4:62202546-62202565 | MS.gene030339:CDS | 45.0% | |
| TCATCATCATGTCTCTCTCG+TGG | + | chr6.4:62200432-62200451 | MS.gene030339:intron | 45.0% | |
| TGAACCGGGAAAGAAGGATT+CGG | + | chr6.4:62198968-62198987 | MS.gene030339:CDS | 45.0% | |
| TGAAGAGAGTGGAAGAAGTG+TGG | - | chr6.4:62198694-62198713 | None:intergenic | 45.0% | |
| TGACGAATCGTTCCCTATTC+AGG | + | chr6.4:62199802-62199821 | MS.gene030339:intron | 45.0% | |
| TGATGAATCGTTCCCCATTC+AGG | - | chr6.4:62199592-62199611 | None:intergenic | 45.0% | |
| TGCTACCAGATACTAGCACA+TGG | - | chr6.4:62201656-62201675 | None:intergenic | 45.0% | |
| TGTGCACCAACTTGCACAAA+AGG | - | chr6.4:62202618-62202637 | None:intergenic | 45.0% | |
| TTGTGTTCAAGGTTACCACC+AGG | + | chr6.4:62202540-62202559 | MS.gene030339:CDS | 45.0% | |
| ! | GGAAGAAGTGTGGTTTGAGA+AGG | - | chr6.4:62198684-62198703 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr6.4:62199577-62199596 | MS.gene030339:intron | 45.0% |
| ! | TCTGTGTATGCTGGAAGCAT+GGG | + | chr6.4:62198816-62198835 | MS.gene030339:CDS | 45.0% |
| !! | ACAAGTGGTGGACCACATTA+TGG | + | chr6.4:62200252-62200271 | MS.gene030339:intron | 45.0% |
| !! | CATAGTGGATGGCTTGTGTT+GGG | + | chr6.4:62198930-62198949 | MS.gene030339:CDS | 45.0% |
| !! | TCATAGTGGATGGCTTGTGT+TGG | + | chr6.4:62198929-62198948 | MS.gene030339:CDS | 45.0% |
| !!! | GGTGATGGTTTTGTTGGTGA+TGG | - | chr6.4:62198594-62198613 | None:intergenic | 45.0% |
| !!! | AATAAAATAATTTTTTTTGA+AGG | - | chr6.4:62199992-62200011 | None:intergenic | 5.0% |
| !!! | ACTTTTAATAAAATAATAAA+AGG | - | chr6.4:62199966-62199985 | None:intergenic | 5.0% |
| ACCGTCACTATTTGACCGCA+GGG | + | chr6.4:62201892-62201911 | MS.gene030339:intron | 50.0% | |
| ACGAAGAATTAGCCATGCGC+CGG | - | chr6.4:62202319-62202338 | None:intergenic | 50.0% | |
| ACGGACGAGAAAGAAAGGGT+TGG | + | chr6.4:62202190-62202209 | MS.gene030339:CDS | 50.0% | |
| AGGGTTTGAACCGGGAAAGA+AGG | + | chr6.4:62198962-62198981 | MS.gene030339:CDS | 50.0% | |
| AGGTGAACCGGAATGTAGTC+CGG | + | chr6.4:62199049-62199068 | MS.gene030339:CDS | 50.0% | |
| CAGTGAGTAGCTGGAAACCA+TGG | + | chr6.4:62202352-62202371 | MS.gene030339:CDS | 50.0% | |
| CATGCTTCTAAACGTCCCCA+TGG | - | chr6.4:62202372-62202391 | None:intergenic | 50.0% | |
| CATGGGGACGTTTAGAAGCA+TGG | + | chr6.4:62202370-62202389 | MS.gene030339:CDS | 50.0% | |
| CCCTACCATGTGCTAGTATC+TGG | + | chr6.4:62201648-62201667 | MS.gene030339:intron | 50.0% | |
| CGTCACGGACGAGAAAGAAA+GGG | + | chr6.4:62202186-62202205 | MS.gene030339:CDS | 50.0% | |
| CTCGGGTTCATTTCGTGGTT+CGG | + | chr6.4:62198991-62199010 | MS.gene030339:CDS | 50.0% | |
| CTTGATACTCTGTCTGAGCC+CGG | - | chr6.4:62202288-62202307 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr6.4:62199684-62199703 | None:intergenic | 50.0% | |
| GTCTGTGTATGCTGGAAGCA+TGG | + | chr6.4:62198815-62198834 | MS.gene030339:CDS | 50.0% | |
| GTGAGTAGCTGGAAACCATG+GGG | + | chr6.4:62202354-62202373 | MS.gene030339:CDS | 50.0% | |
| TACCGTCACTATTTGACCGC+AGG | + | chr6.4:62201891-62201910 | MS.gene030339:intron | 50.0% | |
| TCCCTGCGGTCAAATAGTGA+CGG | - | chr6.4:62201896-62201915 | None:intergenic | 50.0% | |
| TGGTTTCCAGCTACTCACTG+AGG | - | chr6.4:62202352-62202371 | None:intergenic | 50.0% | |
| TTCGGTCTGAACCAGATCCA+CGG | + | chr6.4:62199009-62199028 | MS.gene030339:CDS | 50.0% | |
| TTGATACTCTGTCTGAGCCC+GGG | - | chr6.4:62202287-62202306 | None:intergenic | 50.0% | |
| ! | TCACGATCTCTCTGGTTCAC+CGG | + | chr6.4:62202224-62202243 | MS.gene030339:CDS | 50.0% |
| !! | AGTGGTGGACCACATTATGG+TGG | + | chr6.4:62200255-62200274 | MS.gene030339:intron | 50.0% |
| !! | GTGGTGGACCACATTATGGT+GGG | + | chr6.4:62200256-62200275 | MS.gene030339:intron | 50.0% |
| AATGCACTCCAGCGTCTCAC+AGG | + | chr6.4:62198771-62198790 | MS.gene030339:CDS | 55.0% | |
| ACACCATTTGTCCCATCCCC+GGG | + | chr6.4:62202267-62202286 | MS.gene030339:CDS | 55.0% | |
| ACCATTGAGGCTGCAGCAAC+CGG | - | chr6.4:62202246-62202265 | None:intergenic | 55.0% | |
| CACACCATTTGTCCCATCCC+CGG | + | chr6.4:62202266-62202285 | MS.gene030339:CDS | 55.0% | |
| CGAAGAATTAGCCATGCGCC+GGG | - | chr6.4:62202318-62202337 | None:intergenic | 55.0% | |
| CGAGCCGAATCCTTCTTTCC+CGG | - | chr6.4:62198975-62198994 | None:intergenic | 55.0% | |
| CGGGAAAGAAGGATTCGGCT+CGG | + | chr6.4:62198973-62198992 | MS.gene030339:CDS | 55.0% | |
| GAAACCACCAGCTCTGCTGA+TGG | + | chr6.4:62198732-62198751 | MS.gene030339:CDS | 55.0% | |
| GAAACCATCAGCAGAGCTGG+TGG | - | chr6.4:62198739-62198758 | None:intergenic | 55.0% | |
| GAAGAATTAGCCATGCGCCG+GGG | - | chr6.4:62202317-62202336 | None:intergenic | 55.0% | |
| GCGTCACGGACGAGAAAGAA+AGG | + | chr6.4:62202185-62202204 | MS.gene030339:CDS | 55.0% | |
| GGGAAAGAAGGATTCGGCTC+GGG | + | chr6.4:62198974-62198993 | MS.gene030339:CDS | 55.0% | |
| GTGGAAACCATCAGCAGAGC+TGG | - | chr6.4:62198742-62198761 | None:intergenic | 55.0% | |
| TAGGTTTGCCTGTGAGACGC+TGG | - | chr6.4:62198782-62198801 | None:intergenic | 55.0% | |
| TCAGCAGAGCTGGTGGTTTC+AGG | - | chr6.4:62198732-62198751 | None:intergenic | 55.0% | |
| TGAACCGGAATGTAGTCCGG+TGG | + | chr6.4:62199052-62199071 | MS.gene030339:CDS | 55.0% | |
| TGATACTCTGTCTGAGCCCG+GGG | - | chr6.4:62202286-62202305 | None:intergenic | 55.0% | |
| TGTGAGACGCTGGAGTGCAT+TGG | - | chr6.4:62198772-62198791 | None:intergenic | 55.0% | |
| ! | GGAAGCATGGGTCGAACTTG+TGG | + | chr6.4:62198828-62198847 | MS.gene030339:CDS | 55.0% |
| !! | TTCGGCTCGGGTTCATTTCG+TGG | + | chr6.4:62198986-62199005 | MS.gene030339:CDS | 55.0% |
| ACCGGTTGCTGCAGCCTCAA+TGG | + | chr6.4:62202242-62202261 | MS.gene030339:CDS | 60.0% | |
| CAAGATCAAACCCCGGCGCA+TGG | + | chr6.4:62202304-62202323 | MS.gene030339:CDS | 60.0% | |
| GCTGGAGTGCATTGGAGTCG+AGG | - | chr6.4:62198764-62198783 | None:intergenic | 60.0% | |
| GGAGTGCATTGGAGTCGAGG+TGG | - | chr6.4:62198761-62198780 | None:intergenic | 60.0% | |
| !! | CTACTCACTGAGGCGCCGTT+TGG | - | chr6.4:62202342-62202361 | None:intergenic | 60.0% |
| ACGGCGCCTCAGTGAGTAGC+TGG | + | chr6.4:62202343-62202362 | MS.gene030339:CDS | 65.0% | |
| ACTCTGTCTGAGCCCGGGGA+TGG | - | chr6.4:62202282-62202301 | None:intergenic | 65.0% | |
| CTCTGTCTGAGCCCGGGGAT+GGG | - | chr6.4:62202281-62202300 | None:intergenic | 65.0% | |
| GAGCCCGGGGATGGGACAAA+TGG | - | chr6.4:62202273-62202292 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 62198537 | 62202776 | 62198537 | ID=MS.gene030339 |
| chr6.4 | mRNA | 62198537 | 62202776 | 62198537 | ID=MS.gene030339.t1;Parent=MS.gene030339 |
| chr6.4 | exon | 62198537 | 62199150 | 62198537 | ID=MS.gene030339.t1.exon1;Parent=MS.gene030339.t1 |
| chr6.4 | CDS | 62198537 | 62199150 | 62198537 | ID=cds.MS.gene030339.t1;Parent=MS.gene030339.t1 |
| chr6.4 | exon | 62202119 | 62202776 | 62202119 | ID=MS.gene030339.t1.exon2;Parent=MS.gene030339.t1 |
| chr6.4 | CDS | 62202119 | 62202776 | 62202119 | ID=cds.MS.gene030339.t1;Parent=MS.gene030339.t1 |
| Gene Sequence |
| Protein sequence |
