Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030705.t1 | XP_003630125.1 | 99.7 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 2.40E-177 | 631.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030705.t1 | Q94AG6 | 78.5 | 316 | 62 | 1 | 1 | 310 | 1 | 316 | 9.8e-135 | 481.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030705.t1 | G7LBC1 | 99.7 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 1.8e-177 | 631.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030705 | MS.gene75068 | PPI |
| MS.gene030705 | MS.gene074632 | PPI |
| MS.gene064041 | MS.gene030705 | PPI |
| MS.gene030289 | MS.gene030705 | PPI |
| MS.gene030705 | MS.gene064047 | PPI |
| MS.gene030705 | MS.gene074631 | PPI |
| MS.gene064043 | MS.gene030705 | PPI |
| MS.gene030705 | MS.gene66338 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030705.t1 | MTR_8g092080 | 99.690 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 0.0 | 651 |
| MS.gene030705.t1 | MTR_1g097890 | 71.080 | 287 | 81 | 2 | 31 | 316 | 29 | 314 | 3.30e-152 | 430 |
| MS.gene030705.t1 | MTR_8g098240 | 33.208 | 265 | 161 | 4 | 50 | 299 | 318 | 581 | 1.80e-41 | 152 |
| MS.gene030705.t1 | MTR_3g025800 | 30.747 | 348 | 187 | 7 | 32 | 325 | 5 | 352 | 9.79e-39 | 140 |
| MS.gene030705.t1 | MTR_6g034515 | 35.616 | 292 | 149 | 8 | 29 | 285 | 34 | 321 | 1.08e-36 | 135 |
| MS.gene030705.t1 | MTR_5g073040 | 31.959 | 291 | 156 | 9 | 49 | 307 | 36 | 316 | 5.41e-33 | 124 |
| MS.gene030705.t1 | MTR_5g073040 | 29.688 | 192 | 124 | 4 | 125 | 310 | 31 | 217 | 2.99e-16 | 78.6 |
| MS.gene030705.t1 | MTR_1g095780 | 30.483 | 269 | 169 | 4 | 47 | 303 | 520 | 782 | 3.99e-32 | 127 |
| MS.gene030705.t1 | MTR_7g109135 | 31.164 | 292 | 164 | 9 | 54 | 311 | 24 | 312 | 7.21e-26 | 105 |
| MS.gene030705.t1 | MTR_4g012850 | 30.714 | 280 | 156 | 11 | 55 | 305 | 22 | 292 | 9.61e-24 | 99.4 |
| MS.gene030705.t1 | MTR_7g015870 | 31.081 | 296 | 164 | 9 | 46 | 304 | 21 | 313 | 2.19e-23 | 98.6 |
| MS.gene030705.t1 | MTR_7g109135 | 30.175 | 285 | 169 | 8 | 54 | 311 | 24 | 305 | 2.87e-23 | 98.2 |
| MS.gene030705.t1 | MTR_1g087840 | 29.433 | 282 | 162 | 7 | 64 | 311 | 31 | 309 | 5.13e-23 | 97.4 |
| MS.gene030705.t1 | MTR_7g015870 | 30.952 | 294 | 160 | 10 | 27 | 283 | 1 | 288 | 6.98e-23 | 97.4 |
| MS.gene030705.t1 | MTR_1g012030 | 27.206 | 272 | 180 | 5 | 52 | 305 | 139 | 410 | 7.86e-22 | 95.5 |
| MS.gene030705.t1 | MTR_4g114320 | 27.076 | 277 | 182 | 6 | 52 | 309 | 123 | 398 | 8.81e-22 | 95.1 |
| MS.gene030705.t1 | MTR_3g107510 | 26.374 | 273 | 183 | 5 | 54 | 308 | 124 | 396 | 1.04e-21 | 95.1 |
| MS.gene030705.t1 | MTR_3g107510 | 30.286 | 175 | 103 | 3 | 52 | 207 | 216 | 390 | 3.24e-14 | 73.2 |
| MS.gene030705.t1 | MTR_3g107510 | 29.747 | 158 | 106 | 3 | 133 | 287 | 122 | 277 | 1.59e-13 | 71.2 |
| MS.gene030705.t1 | MTR_6g015860 | 29.553 | 291 | 165 | 10 | 54 | 307 | 21 | 308 | 5.77e-21 | 92.0 |
| MS.gene030705.t1 | MTR_7g084400 | 28.014 | 282 | 172 | 6 | 49 | 305 | 210 | 485 | 1.70e-20 | 92.0 |
| MS.gene030705.t1 | MTR_4g057850 | 30.508 | 295 | 156 | 11 | 53 | 309 | 23 | 306 | 1.82e-20 | 90.5 |
| MS.gene030705.t1 | MTR_7g109135 | 31.224 | 237 | 145 | 7 | 90 | 311 | 1 | 234 | 2.27e-20 | 88.6 |
| MS.gene030705.t1 | MTR_8g027975 | 26.506 | 332 | 192 | 9 | 1 | 282 | 1 | 330 | 4.16e-20 | 90.1 |
| MS.gene030705.t1 | MTR_8g027975 | 28.125 | 192 | 124 | 3 | 133 | 310 | 51 | 242 | 1.20e-17 | 83.2 |
| MS.gene030705.t1 | MTR_8g096050 | 29.032 | 279 | 168 | 7 | 53 | 305 | 228 | 502 | 6.21e-20 | 90.5 |
| MS.gene030705.t1 | MTR_5g009500 | 26.316 | 342 | 198 | 9 | 11 | 305 | 4 | 338 | 9.10e-20 | 89.0 |
| MS.gene030705.t1 | MTR_5g009500 | 29.293 | 198 | 126 | 3 | 127 | 310 | 32 | 229 | 3.69e-18 | 84.3 |
| MS.gene030705.t1 | MTR_7g066690 | 28.470 | 281 | 158 | 8 | 63 | 307 | 28 | 301 | 1.19e-19 | 87.8 |
| MS.gene030705.t1 | MTR_5g055410 | 30.851 | 282 | 156 | 10 | 64 | 310 | 33 | 310 | 3.60e-19 | 87.4 |
| MS.gene030705.t1 | MTR_4g005330 | 26.852 | 324 | 190 | 11 | 26 | 309 | 41 | 357 | 6.80e-19 | 86.7 |
| MS.gene030705.t1 | MTR_8g019480 | 26.797 | 306 | 166 | 9 | 62 | 309 | 43 | 348 | 9.23e-19 | 86.3 |
| MS.gene030705.t1 | MTR_8g076760 | 28.723 | 282 | 155 | 7 | 66 | 305 | 28 | 305 | 9.76e-19 | 85.5 |
| MS.gene030705.t1 | MTR_8g076760 | 28.824 | 170 | 109 | 3 | 149 | 307 | 30 | 198 | 8.77e-14 | 71.2 |
| MS.gene030705.t1 | MTR_2g102010 | 31.474 | 251 | 145 | 8 | 55 | 281 | 23 | 270 | 1.75e-18 | 84.7 |
| MS.gene030705.t1 | MTR_4g005330 | 26.599 | 297 | 172 | 10 | 53 | 309 | 1 | 291 | 2.79e-18 | 84.0 |
| MS.gene030705.t1 | MTR_4g018750 | 27.143 | 280 | 157 | 8 | 63 | 304 | 26 | 296 | 8.38e-18 | 82.8 |
| MS.gene030705.t1 | MTR_3g098460 | 26.619 | 278 | 176 | 6 | 53 | 305 | 206 | 480 | 1.86e-17 | 83.2 |
| MS.gene030705.t1 | MTR_3g098460 | 28.492 | 179 | 105 | 4 | 52 | 207 | 299 | 477 | 2.16e-13 | 70.9 |
| MS.gene030705.t1 | MTR_1g088995 | 28.405 | 257 | 157 | 7 | 47 | 279 | 28 | 281 | 9.03e-17 | 80.1 |
| MS.gene030705.t1 | MTR_7g109135 | 31.250 | 176 | 106 | 5 | 149 | 311 | 40 | 213 | 1.77e-16 | 77.4 |
| MS.gene030705.t1 | MTR_2g032610 | 25.092 | 271 | 166 | 8 | 66 | 299 | 43 | 313 | 4.00e-16 | 78.2 |
| MS.gene030705.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 2.14e-15 | 75.5 |
| MS.gene030705.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 2.67e-15 | 75.1 |
| MS.gene030705.t1 | MTR_6g091800 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 3.36e-15 | 75.5 |
| MS.gene030705.t1 | MTR_6g091800 | 21.086 | 313 | 199 | 7 | 34 | 305 | 1 | 306 | 1.02e-11 | 65.1 |
| MS.gene030705.t1 | MTR_6g091800 | 26.667 | 210 | 108 | 7 | 48 | 220 | 115 | 315 | 1.37e-11 | 64.7 |
| MS.gene030705.t1 | MTR_5g030530 | 30.500 | 200 | 108 | 5 | 38 | 207 | 95 | 293 | 4.72e-15 | 74.7 |
| MS.gene030705.t1 | MTR_5g030530 | 27.698 | 278 | 156 | 11 | 43 | 282 | 3 | 273 | 4.98e-13 | 68.9 |
| MS.gene030705.t1 | MTR_5g030530 | 29.064 | 203 | 125 | 4 | 133 | 316 | 8 | 210 | 1.61e-11 | 64.3 |
| MS.gene030705.t1 | MTR_7g064980 | 25.941 | 239 | 155 | 5 | 87 | 307 | 82 | 316 | 7.17e-15 | 74.7 |
| MS.gene030705.t1 | MTR_7g064980 | 28.966 | 145 | 97 | 2 | 172 | 310 | 76 | 220 | 3.40e-12 | 66.6 |
| MS.gene030705.t1 | MTR_7g064980 | 28.261 | 184 | 106 | 4 | 48 | 207 | 130 | 311 | 4.84e-12 | 66.2 |
| MS.gene030705.t1 | MTR_7g068340 | 24.481 | 241 | 173 | 6 | 87 | 324 | 142 | 376 | 1.98e-14 | 73.6 |
| MS.gene030705.t1 | MTR_7g068340 | 30.994 | 171 | 102 | 6 | 149 | 308 | 103 | 268 | 2.56e-12 | 67.4 |
| MS.gene030705.t1 | MTR_4g119770 | 23.780 | 328 | 185 | 9 | 39 | 305 | 2 | 325 | 4.53e-14 | 72.4 |
| MS.gene030705.t1 | MTR_6g091800 | 33.143 | 175 | 98 | 6 | 125 | 280 | 10 | 184 | 4.85e-14 | 70.1 |
| MS.gene030705.t1 | MTR_3g104600 | 24.116 | 311 | 191 | 8 | 38 | 305 | 21 | 329 | 1.06e-13 | 71.2 |
| MS.gene030705.t1 | MTR_4g088545 | 26.354 | 277 | 157 | 6 | 49 | 284 | 9 | 279 | 1.11e-13 | 70.9 |
| MS.gene030705.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 1.65e-11 | 64.3 |
| MS.gene030705.t1 | MTR_3g104810 | 24.510 | 306 | 173 | 8 | 62 | 309 | 42 | 347 | 1.31e-13 | 71.2 |
| MS.gene030705.t1 | MTR_8g066975 | 28.826 | 281 | 149 | 10 | 43 | 282 | 3 | 273 | 2.99e-13 | 69.7 |
| MS.gene030705.t1 | MTR_8g066975 | 31.013 | 158 | 97 | 4 | 56 | 207 | 142 | 293 | 4.27e-12 | 66.2 |
| MS.gene030705.t1 | MTR_2g436930 | 22.045 | 313 | 178 | 7 | 54 | 305 | 17 | 324 | 4.79e-13 | 69.3 |
| MS.gene030705.t1 | MTR_6g034145 | 31.410 | 156 | 93 | 3 | 166 | 307 | 2 | 157 | 7.15e-13 | 68.2 |
| MS.gene030705.t1 | MTR_5g081150 | 29.703 | 202 | 126 | 4 | 124 | 309 | 25 | 226 | 7.56e-13 | 67.8 |
| MS.gene030705.t1 | MTR_5g081150 | 28.713 | 202 | 128 | 4 | 124 | 309 | 25 | 226 | 9.02e-13 | 67.4 |
| MS.gene030705.t1 | MTR_3g100570 | 23.548 | 310 | 178 | 7 | 53 | 307 | 7 | 312 | 1.10e-12 | 68.2 |
| MS.gene030705.t1 | MTR_6g092210 | 31.333 | 150 | 95 | 3 | 166 | 307 | 2 | 151 | 1.37e-12 | 67.0 |
| MS.gene030705.t1 | MTR_6g092210 | 27.941 | 204 | 107 | 7 | 48 | 220 | 61 | 255 | 4.10e-12 | 65.9 |
| MS.gene030705.t1 | MTR_3g462140 | 26.207 | 290 | 178 | 8 | 47 | 303 | 10 | 296 | 2.44e-12 | 67.0 |
| MS.gene030705.t1 | MTR_5g081150 | 28.713 | 202 | 128 | 4 | 124 | 309 | 25 | 226 | 2.76e-12 | 67.0 |
| MS.gene030705.t1 | MTR_5g081150 | 27.974 | 311 | 179 | 12 | 36 | 307 | 19 | 323 | 3.18e-12 | 66.6 |
| MS.gene030705.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 2.95e-12 | 66.6 |
| MS.gene030705.t1 | MTR_2g436930 | 24.020 | 204 | 131 | 4 | 126 | 305 | 31 | 234 | 3.07e-12 | 65.9 |
| MS.gene030705.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 4.25e-12 | 66.6 |
| MS.gene030705.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 4.91e-12 | 66.2 |
| MS.gene030705.t1 | MTR_6g091800 | 28.761 | 226 | 118 | 6 | 125 | 307 | 10 | 235 | 5.14e-12 | 65.9 |
| MS.gene030705.t1 | MTR_3g074490 | 26.804 | 194 | 136 | 4 | 132 | 323 | 115 | 304 | 5.29e-12 | 66.6 |
| MS.gene030705.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 8.83e-12 | 64.7 |
| MS.gene030705.t1 | MTR_4g088545 | 27.500 | 200 | 105 | 5 | 49 | 215 | 9 | 201 | 1.54e-11 | 63.9 |
| MS.gene030705.t1 | MTR_4g088545 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 1.16e-11 | 64.7 |
| MS.gene030705.t1 | MTR_4g088545 | 27.500 | 200 | 105 | 5 | 49 | 215 | 9 | 201 | 1.45e-11 | 64.3 |
| MS.gene030705.t1 | MTR_1g090330 | 22.603 | 292 | 166 | 7 | 58 | 304 | 20 | 296 | 2.79e-11 | 63.9 |
| MS.gene030705.t1 | MTR_5g081910 | 24.919 | 309 | 164 | 9 | 67 | 310 | 23 | 328 | 3.03e-11 | 63.9 |
| MS.gene030705.t1 | MTR_4g018750 | 25.101 | 247 | 138 | 8 | 63 | 271 | 26 | 263 | 6.72e-11 | 62.4 |
| MS.gene030705.t1 | MTR_4g016730 | 25.764 | 229 | 145 | 6 | 87 | 306 | 144 | 356 | 7.53e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030705.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 3.31e-178 | 496 |
| MS.gene030705.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 3.31e-178 | 496 |
| MS.gene030705.t1 | AT4G39460 | 79.114 | 316 | 60 | 2 | 1 | 310 | 1 | 316 | 3.31e-178 | 496 |
| MS.gene030705.t1 | AT1G34065 | 73.571 | 280 | 74 | 0 | 29 | 308 | 59 | 338 | 1.38e-154 | 437 |
| MS.gene030705.t1 | AT1G34065 | 73.571 | 280 | 74 | 0 | 29 | 308 | 52 | 331 | 3.51e-154 | 436 |
| MS.gene030705.t1 | AT4G11440 | 33.696 | 276 | 157 | 5 | 54 | 306 | 332 | 604 | 2.17e-41 | 152 |
| MS.gene030705.t1 | AT4G11440 | 33.696 | 276 | 157 | 5 | 54 | 306 | 332 | 604 | 2.17e-41 | 152 |
| MS.gene030705.t1 | AT1G74240 | 34.615 | 286 | 140 | 5 | 48 | 286 | 32 | 317 | 3.75e-39 | 142 |
| MS.gene030705.t1 | AT1G74240 | 35.075 | 268 | 127 | 5 | 66 | 286 | 2 | 269 | 9.67e-37 | 134 |
| MS.gene030705.t1 | AT5G42130 | 32.567 | 261 | 150 | 5 | 66 | 302 | 132 | 390 | 3.42e-35 | 132 |
| MS.gene030705.t1 | AT2G26360 | 30.159 | 315 | 182 | 5 | 16 | 293 | 51 | 364 | 6.12e-34 | 128 |
| MS.gene030705.t1 | AT1G07030 | 31.930 | 285 | 167 | 6 | 48 | 307 | 36 | 318 | 1.99e-32 | 123 |
| MS.gene030705.t1 | AT1G07030 | 30.366 | 191 | 124 | 4 | 125 | 310 | 32 | 218 | 1.40e-16 | 79.7 |
| MS.gene030705.t1 | AT2G35800 | 29.545 | 264 | 177 | 2 | 48 | 303 | 541 | 803 | 6.17e-32 | 126 |
| MS.gene030705.t1 | AT2G30160 | 31.944 | 288 | 166 | 9 | 48 | 307 | 38 | 323 | 1.27e-31 | 121 |
| MS.gene030705.t1 | AT2G30160 | 30.055 | 183 | 119 | 4 | 133 | 310 | 42 | 220 | 1.58e-14 | 73.6 |
| MS.gene030705.t1 | AT3G54110 | 29.617 | 287 | 157 | 8 | 58 | 307 | 21 | 299 | 3.43e-24 | 100 |
| MS.gene030705.t1 | AT4G32400 | 28.623 | 276 | 179 | 6 | 52 | 309 | 114 | 389 | 5.16e-24 | 101 |
| MS.gene030705.t1 | AT3G20240 | 27.491 | 291 | 169 | 8 | 53 | 305 | 53 | 339 | 2.64e-23 | 99.0 |
| MS.gene030705.t1 | AT5G26200 | 26.280 | 293 | 171 | 6 | 62 | 309 | 49 | 341 | 1.43e-20 | 91.3 |
| MS.gene030705.t1 | AT4G01100 | 26.101 | 318 | 186 | 7 | 37 | 305 | 27 | 344 | 2.15e-20 | 90.9 |
| MS.gene030705.t1 | AT4G01100 | 30.412 | 194 | 117 | 5 | 133 | 310 | 42 | 233 | 1.04e-16 | 80.1 |
| MS.gene030705.t1 | AT1G79900 | 28.571 | 266 | 168 | 8 | 67 | 314 | 31 | 292 | 4.16e-20 | 89.4 |
| MS.gene030705.t1 | AT5G58970 | 27.551 | 294 | 177 | 6 | 47 | 307 | 11 | 301 | 5.32e-20 | 89.0 |
| MS.gene030705.t1 | AT5G15640 | 28.889 | 315 | 181 | 10 | 30 | 306 | 11 | 320 | 1.02e-19 | 88.6 |
| MS.gene030705.t1 | AT5G15640 | 28.622 | 283 | 164 | 7 | 62 | 306 | 31 | 313 | 1.80e-19 | 87.8 |
| MS.gene030705.t1 | AT4G03115 | 28.030 | 264 | 163 | 6 | 40 | 279 | 23 | 283 | 5.22e-19 | 86.3 |
| MS.gene030705.t1 | AT4G03115 | 28.030 | 264 | 163 | 6 | 40 | 279 | 55 | 315 | 6.43e-19 | 86.7 |
| MS.gene030705.t1 | AT2G47490 | 28.169 | 284 | 166 | 9 | 64 | 313 | 29 | 308 | 6.84e-19 | 85.9 |
| MS.gene030705.t1 | AT2G37890 | 27.184 | 309 | 188 | 10 | 32 | 305 | 26 | 332 | 2.02e-17 | 82.0 |
| MS.gene030705.t1 | AT2G37890 | 30.348 | 201 | 124 | 4 | 127 | 311 | 39 | 239 | 3.37e-15 | 75.9 |
| MS.gene030705.t1 | AT4G01100 | 25.000 | 332 | 186 | 8 | 37 | 305 | 27 | 358 | 2.41e-17 | 82.4 |
| MS.gene030705.t1 | AT4G01100 | 27.670 | 206 | 121 | 4 | 133 | 310 | 42 | 247 | 1.91e-14 | 73.9 |
| MS.gene030705.t1 | AT5G09470 | 26.638 | 229 | 157 | 3 | 89 | 307 | 107 | 334 | 3.84e-17 | 81.3 |
| MS.gene030705.t1 | AT4G01100 | 26.877 | 253 | 151 | 5 | 87 | 305 | 42 | 294 | 5.80e-17 | 80.5 |
| MS.gene030705.t1 | AT4G01100 | 31.677 | 161 | 97 | 4 | 161 | 310 | 25 | 183 | 4.84e-16 | 77.8 |
| MS.gene030705.t1 | AT4G01100 | 28.205 | 195 | 99 | 5 | 54 | 207 | 97 | 291 | 3.87e-13 | 69.3 |
| MS.gene030705.t1 | AT5G66380 | 28.638 | 213 | 131 | 5 | 130 | 326 | 7 | 214 | 7.04e-17 | 80.1 |
| MS.gene030705.t1 | AT5G66380 | 27.063 | 303 | 181 | 8 | 49 | 313 | 7 | 307 | 2.80e-15 | 75.5 |
| MS.gene030705.t1 | AT5G51050 | 29.286 | 280 | 163 | 8 | 53 | 305 | 224 | 495 | 9.81e-17 | 81.3 |
| MS.gene030705.t1 | AT5G51050 | 29.545 | 176 | 103 | 6 | 52 | 207 | 318 | 492 | 1.76e-12 | 68.2 |
| MS.gene030705.t1 | AT4G03115 | 29.442 | 197 | 131 | 4 | 88 | 279 | 19 | 212 | 1.46e-16 | 78.2 |
| MS.gene030705.t1 | AT1G72820 | 26.159 | 302 | 169 | 8 | 62 | 309 | 41 | 342 | 1.78e-16 | 79.7 |
| MS.gene030705.t1 | AT1G72820 | 26.159 | 302 | 169 | 8 | 62 | 309 | 41 | 342 | 1.78e-16 | 79.7 |
| MS.gene030705.t1 | AT4G03115 | 29.442 | 197 | 131 | 4 | 88 | 279 | 27 | 220 | 2.04e-16 | 78.2 |
| MS.gene030705.t1 | AT1G25380 | 29.078 | 282 | 162 | 9 | 64 | 310 | 33 | 311 | 3.48e-16 | 79.0 |
| MS.gene030705.t1 | AT1G25380 | 29.078 | 282 | 162 | 9 | 64 | 310 | 33 | 311 | 3.48e-16 | 79.0 |
| MS.gene030705.t1 | AT5G01340 | 28.269 | 283 | 160 | 9 | 53 | 299 | 18 | 293 | 2.85e-15 | 75.5 |
| MS.gene030705.t1 | AT5G61810 | 28.520 | 277 | 168 | 8 | 52 | 306 | 65 | 333 | 1.20e-14 | 73.9 |
| MS.gene030705.t1 | AT5G61810 | 28.520 | 277 | 168 | 8 | 52 | 306 | 208 | 476 | 1.28e-14 | 74.7 |
| MS.gene030705.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.55e-14 | 72.0 |
| MS.gene030705.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.55e-14 | 72.0 |
| MS.gene030705.t1 | AT3G51870 | 25.103 | 243 | 171 | 7 | 87 | 325 | 146 | 381 | 3.96e-14 | 72.8 |
| MS.gene030705.t1 | AT3G51870 | 28.889 | 180 | 98 | 7 | 146 | 307 | 104 | 271 | 1.42e-11 | 65.1 |
| MS.gene030705.t1 | AT3G53940 | 26.102 | 295 | 176 | 10 | 50 | 306 | 71 | 361 | 4.53e-14 | 72.8 |
| MS.gene030705.t1 | AT3G53940 | 29.897 | 194 | 113 | 5 | 139 | 311 | 76 | 267 | 3.58e-13 | 70.1 |
| MS.gene030705.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 5.10e-14 | 72.0 |
| MS.gene030705.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.04e-12 | 67.0 |
| MS.gene030705.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 5.10e-14 | 72.0 |
| MS.gene030705.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.04e-12 | 67.0 |
| MS.gene030705.t1 | AT5G46800 | 28.315 | 279 | 156 | 8 | 43 | 282 | 3 | 276 | 5.10e-14 | 72.0 |
| MS.gene030705.t1 | AT5G46800 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.04e-12 | 67.0 |
| MS.gene030705.t1 | AT5G01500 | 27.027 | 222 | 154 | 5 | 87 | 306 | 174 | 389 | 6.91e-14 | 72.4 |
| MS.gene030705.t1 | AT5G01500 | 30.726 | 179 | 98 | 7 | 146 | 308 | 132 | 300 | 2.40e-11 | 64.7 |
| MS.gene030705.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.00e-13 | 71.2 |
| MS.gene030705.t1 | AT3G55640 | 29.508 | 183 | 107 | 3 | 48 | 208 | 141 | 323 | 1.67e-12 | 67.8 |
| MS.gene030705.t1 | AT3G55640 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.00e-13 | 71.2 |
| MS.gene030705.t1 | AT3G55640 | 29.508 | 183 | 107 | 3 | 48 | 208 | 141 | 323 | 1.67e-12 | 67.8 |
| MS.gene030705.t1 | AT2G33820 | 26.182 | 275 | 164 | 7 | 48 | 285 | 14 | 286 | 1.13e-13 | 70.9 |
| MS.gene030705.t1 | AT3G53940 | 29.798 | 198 | 116 | 5 | 139 | 315 | 76 | 271 | 1.25e-13 | 70.5 |
| MS.gene030705.t1 | AT1G14140 | 25.436 | 287 | 180 | 7 | 52 | 306 | 16 | 300 | 1.39e-13 | 70.9 |
| MS.gene030705.t1 | AT4G26180 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 2.99e-13 | 69.7 |
| MS.gene030705.t1 | AT4G26180 | 23.322 | 283 | 176 | 6 | 37 | 280 | 4 | 284 | 1.01e-12 | 68.2 |
| MS.gene030705.t1 | AT4G26180 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 4.18e-13 | 69.7 |
| MS.gene030705.t1 | AT4G26180 | 23.377 | 308 | 195 | 6 | 37 | 305 | 4 | 309 | 5.48e-13 | 69.3 |
| MS.gene030705.t1 | AT2G33820 | 25.088 | 283 | 165 | 7 | 48 | 285 | 14 | 294 | 7.28e-13 | 68.6 |
| MS.gene030705.t1 | AT5G07320 | 27.239 | 268 | 167 | 6 | 60 | 306 | 217 | 477 | 7.52e-13 | 69.3 |
| MS.gene030705.t1 | AT5G07320 | 29.143 | 175 | 104 | 5 | 52 | 207 | 300 | 473 | 2.87e-12 | 67.8 |
| MS.gene030705.t1 | AT4G24570 | 25.991 | 227 | 158 | 2 | 90 | 307 | 87 | 312 | 1.32e-12 | 67.8 |
| MS.gene030705.t1 | AT3G21390 | 24.918 | 305 | 169 | 9 | 54 | 299 | 43 | 346 | 2.26e-12 | 67.4 |
| MS.gene030705.t1 | AT3G21390 | 24.918 | 305 | 169 | 9 | 54 | 299 | 21 | 324 | 2.41e-12 | 67.4 |
| MS.gene030705.t1 | AT1G14560 | 25.402 | 311 | 176 | 9 | 43 | 305 | 18 | 320 | 8.63e-12 | 65.5 |
| MS.gene030705.t1 | AT1G14560 | 27.700 | 213 | 106 | 8 | 52 | 221 | 25 | 232 | 2.54e-11 | 63.2 |
| MS.gene030705.t1 | AT5G64970 | 28.079 | 203 | 137 | 5 | 106 | 302 | 106 | 305 | 6.72e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGCAATTTCTGCTTTGC+AGG | 0.223057 | 4.3:+9264336 | None:intergenic |
| TTATTGAAAGGCCTTTATTC+TGG | 0.225181 | 4.3:-9265488 | MS.gene030705:CDS |
| GATCCAGAAAATGCAATTAT+TGG | 0.242454 | 4.3:-9263184 | MS.gene030705:CDS |
| GCATCTAGGGAGGGCTTTAA+AGG | 0.249580 | 4.3:-9263791 | MS.gene030705:CDS |
| ATTCCCTTGTATTGGTTTGC+AGG | 0.276596 | 4.3:+9262322 | None:intergenic |
| TATATTTATTGCAGGGTATT+GGG | 0.281623 | 4.3:-9262090 | MS.gene030705:intron |
| TTGTGTTCAAACCATTATTA+AGG | 0.295101 | 4.3:-9262293 | MS.gene030705:CDS |
| CTGCAGCACTGAGCTAGTTT+AGG | 0.298289 | 4.3:+9261977 | None:intergenic |
| GACTTCTTACGCACTTTATT+CGG | 0.315195 | 4.3:-9266623 | MS.gene030705:intron |
| TTATATTTATTGCAGGGTAT+TGG | 0.325821 | 4.3:-9262091 | MS.gene030705:intron |
| ATAGGTGGTTCAATATTCTT+TGG | 0.340105 | 4.3:-9262046 | MS.gene030705:CDS |
| CTCTATGAGCAGATTCGTTT+AGG | 0.342765 | 4.3:-9263595 | MS.gene030705:CDS |
| GGATTGGCAGGGAACCTTGC+TGG | 0.346162 | 4.3:-9265467 | MS.gene030705:CDS |
| GTCAAGCAACGAATGCAAAC+TGG | 0.350543 | 4.3:-9263851 | MS.gene030705:CDS |
| TGGGCCCTCTTCCTTAATAA+TGG | 0.357096 | 4.3:+9262282 | None:intergenic |
| GGCCTTTATTCTGGATTGGC+AGG | 0.363354 | 4.3:-9265479 | MS.gene030705:CDS |
| TCCCTGCCAATCCAGAATAA+AGG | 0.367538 | 4.3:+9265477 | None:intergenic |
| AGGGCATCTGCTTTATTTGT+TGG | 0.371448 | 4.3:-9264369 | MS.gene030705:CDS |
| AATCTACAATTCCCTTGTAT+TGG | 0.374693 | 4.3:+9262314 | None:intergenic |
| TGTCATCAAGACAAGGTTAA+TGG | 0.406251 | 4.3:-9262482 | MS.gene030705:CDS |
| TCAAACCATTATTAAGGAAG+AGG | 0.421702 | 4.3:-9262287 | MS.gene030705:CDS |
| TTTCTTGTAGGCGCACTAAC+CGG | 0.426214 | 4.3:-9262526 | MS.gene030705:intron |
| CTGTTCGCTTTATTGCATCT+AGG | 0.427767 | 4.3:-9263805 | MS.gene030705:CDS |
| CGCTTTATTGCATCTAGGGA+GGG | 0.439283 | 4.3:-9263800 | MS.gene030705:CDS |
| ATGCCTATCCAAAGCACTCT+TGG | 0.455630 | 4.3:+9262067 | None:intergenic |
| TTTAAACTTCCTTAGACTGC+AGG | 0.461102 | 4.3:-9264012 | MS.gene030705:intron |
| AGATGCAGCAATGCCTCCTA+TGG | 0.462674 | 4.3:+9263987 | None:intergenic |
| CCTTAGACTGCAGGTGCCAT+AGG | 0.468200 | 4.3:-9264003 | MS.gene030705:intron |
| TCCTCTTACACTCTCCGTTA+CGG | 0.470847 | 4.3:-9267448 | MS.gene030705:CDS |
| TGTTCGCTTTATTGCATCTA+GGG | 0.478843 | 4.3:-9263804 | MS.gene030705:CDS |
| GAGAATTAAGCAACCTCTGT+TGG | 0.484810 | 4.3:+9263952 | None:intergenic |
| GAAAGGCCTTTATTCTGGAT+TGG | 0.486028 | 4.3:-9265483 | MS.gene030705:CDS |
| GTATTGGGCCAAGAGTGCTT+TGG | 0.489705 | 4.3:-9262075 | MS.gene030705:CDS |
| CAAGACAAGGTTAATGGTCC+AGG | 0.493486 | 4.3:-9262476 | MS.gene030705:intron |
| TATTTCCAATCACAGGGGTA+TGG | 0.494820 | 4.3:-9263664 | MS.gene030705:intron |
| AAAGTGCGTAAGAAGTCAAA+TGG | 0.506329 | 4.3:+9266629 | None:intergenic |
| ATTATTAAGGAAGAGGGCCC+AGG | 0.516548 | 4.3:-9262280 | MS.gene030705:CDS |
| GTTATCGCAGGAGGTACAGC+TGG | 0.521468 | 4.3:-9266026 | MS.gene030705:CDS |
| CAAACCATTATTAAGGAAGA+GGG | 0.542176 | 4.3:-9262286 | MS.gene030705:CDS |
| AAGTGGTGTAGTTATAGCTC+CGG | 0.542614 | 4.3:+9262507 | None:intergenic |
| GGGCCAAGAGTGCTTTGGAT+AGG | 0.546598 | 4.3:-9262070 | MS.gene030705:CDS |
| TATGCAGAGGGTGTTATCGC+AGG | 0.559305 | 4.3:-9266038 | MS.gene030705:intron |
| TCAAGCAACGAATGCAAACT+GGG | 0.559945 | 4.3:-9263850 | MS.gene030705:CDS |
| GGGACCTGCAAACCAATACA+AGG | 0.561092 | 4.3:-9262326 | MS.gene030705:CDS |
| ACGGTGCAAGATTCTGCCTC+CGG | 0.561209 | 4.3:-9267429 | MS.gene030705:intron |
| TCGTTTAGGTTATATGCTTG+CGG | 0.564520 | 4.3:-9263581 | MS.gene030705:intron |
| GCAAAACTGAATAGCATCGA+AGG | 0.569103 | 4.3:+9263618 | None:intergenic |
| GGCAGAATCTTGCACCGTAA+CGG | 0.574358 | 4.3:+9267434 | None:intergenic |
| TCGCTTTATTGCATCTAGGG+AGG | 0.574800 | 4.3:-9263801 | MS.gene030705:CDS |
| TAGACTGCAGGTGCCATAGG+AGG | 0.585629 | 4.3:-9264000 | MS.gene030705:CDS |
| GCCTTTATTCTGGATTGGCA+GGG | 0.591598 | 4.3:-9265478 | MS.gene030705:CDS |
| TTTAGGTGTAGGACGCCTCT+CGG | 0.591628 | 4.3:+9261994 | None:intergenic |
| GTGTAGGACGCCTCTCGGCA+AGG | 0.600855 | 4.3:+9261999 | None:intergenic |
| AGAGTGCTTTGGATAGGCAT+AGG | 0.606452 | 4.3:-9262064 | MS.gene030705:CDS |
| CTGCAAAGCAGAAATTGCTA+AGG | 0.608222 | 4.3:-9264335 | MS.gene030705:CDS |
| ACCGTAACGGAGAGTGTAAG+AGG | 0.610387 | 4.3:+9267447 | None:intergenic |
| CTAAACGAATCTGCTCATAG+AGG | 0.612392 | 4.3:+9263596 | None:intergenic |
| GCGAACAGCATTAGAAGCTG+AGG | 0.620160 | 4.3:+9263820 | None:intergenic |
| CACTTGATGTCATCAAGACA+AGG | 0.621719 | 4.3:-9262489 | MS.gene030705:CDS |
| CACTGAGCTAGTTTAGGTGT+AGG | 0.633466 | 4.3:+9261983 | None:intergenic |
| CATACCTTCAGAAAAGCACC+TGG | 0.639866 | 4.3:+9262262 | None:intergenic |
| CAAAACTGAATAGCATCGAA+GGG | 0.640886 | 4.3:+9263619 | None:intergenic |
| GTGCTTTGGATAGGCATAGG+TGG | 0.648337 | 4.3:-9262061 | MS.gene030705:CDS |
| CAAAACGTTTCCTTGCCGAG+AGG | 0.661791 | 4.3:-9262009 | MS.gene030705:CDS |
| CTTGTCTTGATGACATCAAG+TGG | 0.662260 | 4.3:+9262490 | None:intergenic |
| GCAGAGGGTGTTATCGCAGG+AGG | 0.664121 | 4.3:-9266035 | MS.gene030705:intron |
| GGACCTGCAAACCAATACAA+GGG | 0.705803 | 4.3:-9262325 | MS.gene030705:CDS |
| CTCACGGTAAGACACCAGCA+AGG | 0.720656 | 4.3:+9265453 | None:intergenic |
| ATACCTTCAGAAAAGCACCT+GGG | 0.748450 | 4.3:+9262263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTATTTTTATGTATTTTA+AGG | - | chr4.3:9265860-9265879 | MS.gene030705:intron | 10.0% |
| !!! | TTTTAAAATTGATATTTCTA+TGG | - | chr4.3:9265480-9265499 | MS.gene030705:CDS | 10.0% |
| !! | AAAATAAAATACACATATGA+AGG | + | chr4.3:9262979-9262998 | None:intergenic | 15.0% |
| !! | AAATAAAATACACATATGAA+GGG | + | chr4.3:9262978-9262997 | None:intergenic | 15.0% |
| !! | AATATGATTTATCTAATTCT+TGG | - | chr4.3:9264122-9264141 | MS.gene030705:intron | 15.0% |
| !! | ATATTCTTATATTTATTGCA+GGG | - | chr4.3:9267308-9267327 | MS.gene030705:intron | 15.0% |
| !! | CAAAAAATTACAAATAGAAA+TGG | + | chr4.3:9266721-9266740 | None:intergenic | 15.0% |
| !! | TAACAAATATATGGAAATTA+AGG | + | chr4.3:9264175-9264194 | None:intergenic | 15.0% |
| !! | TATTTCACAAATTATTTAAG+CGG | - | chr4.3:9264920-9264939 | MS.gene030705:intron | 15.0% |
| !! | TCCAAACAAAATTTAATATA+AGG | + | chr4.3:9264821-9264840 | None:intergenic | 15.0% |
| !! | TCTTTAAACATTAATTCATA+AGG | + | chr4.3:9266358-9266377 | None:intergenic | 15.0% |
| !! | TTATACTATCTAATCTATAT+GGG | + | chr4.3:9262370-9262389 | None:intergenic | 15.0% |
| !! | TTTATACTATCTAATCTATA+TGG | + | chr4.3:9262371-9262390 | None:intergenic | 15.0% |
| !!! | AAAATGCTTTAGAATTTTTA+TGG | - | chr4.3:9265348-9265367 | MS.gene030705:intron | 15.0% |
| !!! | AAATGATCATTTCTTTATTT+TGG | - | chr4.3:9266788-9266807 | MS.gene030705:intron | 15.0% |
| !!! | AAATGCTTTAGAATTTTTAT+GGG | - | chr4.3:9265349-9265368 | MS.gene030705:intron | 15.0% |
| !!! | ATATTTGTTGATATTGATAT+AGG | - | chr4.3:9264234-9264253 | MS.gene030705:intron | 15.0% |
| !!! | ATTTTGTTTAAATGTTTCTT+TGG | - | chr4.3:9265712-9265731 | MS.gene030705:intron | 15.0% |
| !!! | GAAAATAAACCTATATTTTT+TGG | - | chr4.3:9263614-9263633 | MS.gene030705:CDS | 15.0% |
| !!! | TCCTTATATTAAATTTTGTT+TGG | - | chr4.3:9264817-9264836 | MS.gene030705:intron | 15.0% |
| !!! | TTTAATTAAGATCTAGAATT+AGG | + | chr4.3:9266518-9266537 | None:intergenic | 15.0% |
| !!! | TTTCTATTTGTAATTTTTTG+TGG | - | chr4.3:9266721-9266740 | MS.gene030705:intron | 15.0% |
| !! | AAAATATCAAAAGAAAGAGA+TGG | + | chr4.3:9265662-9265681 | None:intergenic | 20.0% |
| !! | AAATATATGGAAATTAAGGT+TGG | + | chr4.3:9264171-9264190 | None:intergenic | 20.0% |
| !! | AAATATCAAAAGAAAGAGAT+GGG | + | chr4.3:9265661-9265680 | None:intergenic | 20.0% |
| !! | AATTAATGTTTAAAGATGTG+TGG | - | chr4.3:9266362-9266381 | MS.gene030705:intron | 20.0% |
| !! | ACAAAATTTAATATAAGGAG+AGG | + | chr4.3:9264816-9264835 | None:intergenic | 20.0% |
| !! | ACAAATTATAATGACTATTG+AGG | - | chr4.3:9263475-9263494 | MS.gene030705:intron | 20.0% |
| !! | ACATTTAAACAAAATATCAC+AGG | + | chr4.3:9265707-9265726 | None:intergenic | 20.0% |
| !! | ACTGTCAATAATCAATAATA+TGG | + | chr4.3:9262512-9262531 | None:intergenic | 20.0% |
| !! | ATATTATCATCATAATTTCC+AGG | + | chr4.3:9264218-9264237 | None:intergenic | 20.0% |
| !! | CAAAATTTAATATAAGGAGA+GGG | + | chr4.3:9264815-9264834 | None:intergenic | 20.0% |
| !! | CAAATTATAATGACTATTGA+GGG | - | chr4.3:9263476-9263495 | MS.gene030705:intron | 20.0% |
| !! | CATATTCTTATATTTATTGC+AGG | - | chr4.3:9267307-9267326 | MS.gene030705:intron | 20.0% |
| !! | GATATTTAAACACAATCTAA+GGG | + | chr4.3:9263274-9263293 | None:intergenic | 20.0% |
| !! | GTTACTACTTATGTTTATAT+AGG | + | chr4.3:9265143-9265162 | None:intergenic | 20.0% |
| !! | TAGCAAATATATCTTCATTT+AGG | + | chr4.3:9266679-9266698 | None:intergenic | 20.0% |
| !! | TGATATTTAAACACAATCTA+AGG | + | chr4.3:9263275-9263294 | None:intergenic | 20.0% |
| !! | TTGATTCATGAATCATATAT+AGG | - | chr4.3:9264976-9264995 | MS.gene030705:intron | 20.0% |
| !!! | AACACCAACTATTAAATTTT+TGG | - | chr4.3:9264788-9264807 | MS.gene030705:intron | 20.0% |
| !!! | ACAATAGCAATTTTTTTTGT+TGG | - | chr4.3:9263657-9263676 | MS.gene030705:intron | 20.0% |
| !!! | ATGTTTGTTTTTGTTTTGTT+AGG | - | chr4.3:9263871-9263890 | MS.gene030705:intron | 20.0% |
| !!! | CAGTTGTTTTAACAAATATA+TGG | + | chr4.3:9264184-9264203 | None:intergenic | 20.0% |
| !!! | CATATATTTGTTAAAACAAC+TGG | - | chr4.3:9264182-9264201 | MS.gene030705:intron | 20.0% |
| !!! | CATCATTTTAACAGATTATA+TGG | - | chr4.3:9262671-9262690 | MS.gene030705:intron | 20.0% |
| !!! | GCCTTTTATGTAAAAAAAAT+GGG | + | chr4.3:9263844-9263863 | None:intergenic | 20.0% |
| !!! | TAAAGCATGAACTATTTTAT+GGG | + | chr4.3:9264395-9264414 | None:intergenic | 20.0% |
| !!! | TATTTGTAATTTTTTGTGGA+TGG | - | chr4.3:9266725-9266744 | MS.gene030705:intron | 20.0% |
| !!! | TATTTTATTTTTCGACTGTA+AGG | - | chr4.3:9262988-9263007 | MS.gene030705:intron | 20.0% |
| !!! | TCCCATTTTTTTTACATAAA+AGG | - | chr4.3:9263840-9263859 | MS.gene030705:CDS | 20.0% |
| !!! | TCTAAATTGCTATTAAGAAA+AGG | + | chr4.3:9263816-9263835 | None:intergenic | 20.0% |
| !!! | TTAAAGCATGAACTATTTTA+TGG | + | chr4.3:9264396-9264415 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTTGATATTTCCA+TGG | - | chr4.3:9263790-9263809 | MS.gene030705:CDS | 20.0% |
| !!! | TTTTCTTAATAGCAATTTAG+AGG | - | chr4.3:9263815-9263834 | MS.gene030705:CDS | 20.0% |
| ! | AAAATATATTTCTTGCCATG+TGG | + | chr4.3:9267268-9267287 | None:intergenic | 25.0% |
| ! | AAGAATTCATATCAACATGT+AGG | - | chr4.3:9266083-9266102 | MS.gene030705:intron | 25.0% |
| ! | AATATCAAAAGAAAGAGATG+GGG | + | chr4.3:9265660-9265679 | None:intergenic | 25.0% |
| ! | ACATATTAAATCTTGACGAT+TGG | + | chr4.3:9263719-9263738 | None:intergenic | 25.0% |
| ! | AGAATTAATCTCAATAGTGT+TGG | - | chr4.3:9262315-9262334 | MS.gene030705:CDS | 25.0% |
| ! | AGGTGAATAAATGACATTAT+AGG | - | chr4.3:9266253-9266272 | MS.gene030705:intron | 25.0% |
| ! | ATTAATTCTCTCGTGAATAT+AGG | + | chr4.3:9262304-9262323 | None:intergenic | 25.0% |
| ! | GAATTAATCTCAATAGTGTT+GGG | - | chr4.3:9262316-9262335 | MS.gene030705:CDS | 25.0% |
| ! | GCACAATATAAAAACCTAAT+AGG | - | chr4.3:9262462-9262481 | MS.gene030705:intron | 25.0% |
| ! | GGAGAAAAACTATTATTGAA+AGG | - | chr4.3:9263905-9263924 | MS.gene030705:intron | 25.0% |
| ! | TAAACAATGAAGAAATCAGT+AGG | - | chr4.3:9266534-9266553 | MS.gene030705:intron | 25.0% |
| ! | TATTGATATTTCCAATCACA+GGG | - | chr4.3:9265735-9265754 | MS.gene030705:intron | 25.0% |
| ! | TCAAGCTATATTTCTTTACA+AGG | - | chr4.3:9266439-9266458 | MS.gene030705:intron | 25.0% |
| ! | TTATATTTATTGCAGGGTAT+TGG | - | chr4.3:9267314-9267333 | MS.gene030705:intron | 25.0% |
| ! | TTGATACTTCTTACAATCTA+TGG | - | chr4.3:9264690-9264709 | MS.gene030705:intron | 25.0% |
| ! | TTGTGTTCAAACCATTATTA+AGG | - | chr4.3:9267112-9267131 | MS.gene030705:intron | 25.0% |
| ! | TTTAAGGACTTGATTTCATT+TGG | - | chr4.3:9265876-9265895 | MS.gene030705:intron | 25.0% |
| !! | ACATGGCAAGAAATATATTT+TGG | - | chr4.3:9267267-9267286 | MS.gene030705:intron | 25.0% |
| !! | ACATTGGCTATTACTTATTA+CGG | + | chr4.3:9263541-9263560 | None:intergenic | 25.0% |
| !! | AGTTGATTTACATAGTATAG+TGG | - | chr4.3:9263750-9263769 | MS.gene030705:intron | 25.0% |
| !! | ATGTTCTGATTTTACAAAAG+AGG | - | chr4.3:9264750-9264769 | MS.gene030705:intron | 25.0% |
| !! | CGCCTTTTATGTAAAAAAAA+TGG | + | chr4.3:9263845-9263864 | None:intergenic | 25.0% |
| !! | GATTTGTATTTCTTTTTGCT+AGG | - | chr4.3:9266181-9266200 | MS.gene030705:intron | 25.0% |
| !! | TATATTTATTGCAGGGTATT+GGG | - | chr4.3:9267315-9267334 | MS.gene030705:intron | 25.0% |
| !! | TGATATTTTGTTGCTAAGAA+TGG | - | chr4.3:9265928-9265947 | MS.gene030705:intron | 25.0% |
| !! | TGTTCTGATTTTACAAAAGA+GGG | - | chr4.3:9264751-9264770 | MS.gene030705:intron | 25.0% |
| !! | TTATTGATTATTGACAGTCA+AGG | - | chr4.3:9262514-9262533 | MS.gene030705:CDS | 25.0% |
| !! | TTCTATTCTTTTAATGACTG+AGG | - | chr4.3:9263075-9263094 | MS.gene030705:intron | 25.0% |
| !!! | AAATAGGTTTTTCGGTAATT+AGG | - | chr4.3:9266753-9266772 | MS.gene030705:intron | 25.0% |
| !!! | AGCAATTTTTTTTGTTGGAT+AGG | - | chr4.3:9263662-9263681 | MS.gene030705:intron | 25.0% |
| !!! | GTATTACTTTTAAATGTGCA+GGG | - | chr4.3:9265017-9265036 | MS.gene030705:intron | 25.0% |
| !!! | TAAGATTCAAGGTTTTGATT+CGG | + | chr4.3:9266414-9266433 | None:intergenic | 25.0% |
| !!! | TATACCATTTTGTTTCTTGT+AGG | - | chr4.3:9266867-9266886 | MS.gene030705:intron | 25.0% |
| !!! | TATTATGGTTACCCTTTTTT+AGG | - | chr4.3:9263102-9263121 | MS.gene030705:intron | 25.0% |
| !!! | TGTATTACTTTTAAATGTGC+AGG | - | chr4.3:9265016-9265035 | MS.gene030705:intron | 25.0% |
| !!! | TTAACTTTTGTTATAGCAGT+AGG | + | chr4.3:9262125-9262144 | None:intergenic | 25.0% |
| AAAAGTTATTGGCAAGCATA+GGG | - | chr4.3:9264060-9264079 | MS.gene030705:intron | 30.0% | |
| AAAATATCACAATAGTGGCT+TGG | + | chr4.3:9265917-9265936 | None:intergenic | 30.0% | |
| AAATATCACAATAGTGGCTT+GGG | + | chr4.3:9265916-9265935 | None:intergenic | 30.0% | |
| AAATTATGTTCTACAGCCTT+GGG | - | chr4.3:9267223-9267242 | MS.gene030705:intron | 30.0% | |
| AACATAGACAGGATAATTTC+AGG | + | chr4.3:9264579-9264598 | None:intergenic | 30.0% | |
| AATCTACAATTCCCTTGTAT+TGG | + | chr4.3:9267094-9267113 | None:intergenic | 30.0% | |
| AATGACTGAGGACATTATTA+TGG | - | chr4.3:9263087-9263106 | MS.gene030705:intron | 30.0% | |
| ACATGTAGGAAATACCTATT+TGG | - | chr4.3:9266097-9266116 | MS.gene030705:intron | 30.0% | |
| AGGCATATGATGTTTCAAAT+AGG | + | chr4.3:9264351-9264370 | None:intergenic | 30.0% | |
| ATAAAGAAAGCAACCATTTG+AGG | + | chr4.3:9263128-9263147 | None:intergenic | 30.0% | |
| ATAGGTGGTTCAATATTCTT+TGG | - | chr4.3:9267359-9267378 | MS.gene030705:intron | 30.0% | |
| ATCGAAAAATAGCTTATTGC+TGG | + | chr4.3:9262156-9262175 | None:intergenic | 30.0% | |
| ATCTTTGATAAACCCCAAAT+AGG | + | chr4.3:9266114-9266133 | None:intergenic | 30.0% | |
| ATGGTTGAAAACTGTTTCAT+TGG | - | chr4.3:9265499-9265518 | MS.gene030705:CDS | 30.0% | |
| ATGTAGGAAATACCTATTTG+GGG | - | chr4.3:9266099-9266118 | MS.gene030705:intron | 30.0% | |
| ATTATTGACAGTCAAGGAAA+AGG | - | chr4.3:9262520-9262539 | MS.gene030705:intron | 30.0% | |
| ATTGATATTTCCAATCACAG+GGG | - | chr4.3:9265736-9265755 | MS.gene030705:intron | 30.0% | |
| CAAACCATTATTAAGGAAGA+GGG | - | chr4.3:9267119-9267138 | MS.gene030705:intron | 30.0% | |
| CATAGTATACAACTTTCAGT+AGG | - | chr4.3:9264093-9264112 | MS.gene030705:intron | 30.0% | |
| CATGATGTTTCAAACATTCT+AGG | - | chr4.3:9263989-9264008 | MS.gene030705:CDS | 30.0% | |
| CATGTAGGAAATACCTATTT+GGG | - | chr4.3:9266098-9266117 | MS.gene030705:intron | 30.0% | |
| CTCGTCTTTCCAAAAAATAT+AGG | + | chr4.3:9263626-9263645 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | + | chr4.3:9264503-9264522 | None:intergenic | 30.0% | |
| GATCCAGAAAATGCAATTAT+TGG | - | chr4.3:9266221-9266240 | MS.gene030705:intron | 30.0% | |
| GCAACAAAATATCACAATAG+TGG | + | chr4.3:9265922-9265941 | None:intergenic | 30.0% | |
| GCTTGACAAAATAAGATTCA+AGG | + | chr4.3:9266425-9266444 | None:intergenic | 30.0% | |
| GGATCACTTAGCTATATATA+TGG | - | chr4.3:9264711-9264730 | MS.gene030705:intron | 30.0% | |
| GGGTCCAAAAATTTAATAGT+TGG | + | chr4.3:9264795-9264814 | None:intergenic | 30.0% | |
| GTAATAAGTAATAGCCAATG+TGG | - | chr4.3:9263540-9263559 | MS.gene030705:intron | 30.0% | |
| GTCCTTAAGTTTGTACTTTA+AGG | - | chr4.3:9264608-9264627 | MS.gene030705:intron | 30.0% | |
| TAAACAAAATATCACAGGTG+CGG | + | chr4.3:9265702-9265721 | None:intergenic | 30.0% | |
| TAAGTTGTTTATCGAAACAG+AGG | + | chr4.3:9262083-9262102 | None:intergenic | 30.0% | |
| TAGCTATATATATGGTTGTC+TGG | - | chr4.3:9264719-9264738 | MS.gene030705:intron | 30.0% | |
| TAGGCAAATTCTATGTAAGT+AGG | + | chr4.3:9264332-9264351 | None:intergenic | 30.0% | |
| TATATGGAAATTAAGGTTGG+TGG | + | chr4.3:9264168-9264187 | None:intergenic | 30.0% | |
| TATCTAATCTATATGGGACT+TGG | + | chr4.3:9262364-9262383 | None:intergenic | 30.0% | |
| TATGTGTATCAGGTAAAAAC+AGG | + | chr4.3:9266966-9266985 | None:intergenic | 30.0% | |
| TCAAACCATTATTAAGGAAG+AGG | - | chr4.3:9267118-9267137 | MS.gene030705:intron | 30.0% | |
| TCATATATGCAGTGAAGAAT+TGG | - | chr4.3:9263240-9263259 | MS.gene030705:intron | 30.0% | |
| TCGAAAAATAGCTTATTGCT+GGG | + | chr4.3:9262155-9262174 | None:intergenic | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | + | chr4.3:9264502-9264521 | None:intergenic | 30.0% | |
| TGGTTGAAAACTGTTTCATT+GGG | - | chr4.3:9265500-9265519 | MS.gene030705:CDS | 30.0% | |
| TTATTGAAAGGCCTTTATTC+TGG | - | chr4.3:9263917-9263936 | MS.gene030705:intron | 30.0% | |
| TTCACTGCATATATGAATGA+GGG | + | chr4.3:9263236-9263255 | None:intergenic | 30.0% | |
| TTGTTAAAACAACTGGAGTT+GGG | - | chr4.3:9264189-9264208 | MS.gene030705:intron | 30.0% | |
| TTTGTTAAAACAACTGGAGT+TGG | - | chr4.3:9264188-9264207 | MS.gene030705:intron | 30.0% | |
| ! | ATATGGAAATTAAGGTTGGT+GGG | + | chr4.3:9264167-9264186 | None:intergenic | 30.0% |
| ! | GAACTATTTTATGGGTAAGA+TGG | + | chr4.3:9264387-9264406 | None:intergenic | 30.0% |
| ! | GATTTGCTCTTATTCCTATT+AGG | + | chr4.3:9262479-9262498 | None:intergenic | 30.0% |
| ! | GTATTGATATTTCCAATCAC+AGG | - | chr4.3:9265734-9265753 | MS.gene030705:intron | 30.0% |
| ! | GTTCTGATTTTACAAAAGAG+GGG | - | chr4.3:9264752-9264771 | MS.gene030705:intron | 30.0% |
| ! | TCAAATGGTTGCTTTCTTTA+TGG | - | chr4.3:9263127-9263146 | MS.gene030705:intron | 30.0% |
| ! | TGAGTTGAAGTGTTAAGTAT+GGG | + | chr4.3:9265198-9265217 | None:intergenic | 30.0% |
| ! | TGGTAGGTAAATAGGTTTTT+CGG | - | chr4.3:9266745-9266764 | MS.gene030705:intron | 30.0% |
| ! | TGTTATCATTCTTTTGTTGC+TGG | - | chr4.3:9265307-9265326 | MS.gene030705:intron | 30.0% |
| !! | ACGTGTTTTTATAGTGTCAA+TGG | + | chr4.3:9263431-9263450 | None:intergenic | 30.0% |
| !! | ATAACTTTTGTTTGCCAGAA+AGG | + | chr4.3:9265969-9265988 | None:intergenic | 30.0% |
| !! | CAAAAACTTAACACTGATTC+AGG | + | chr4.3:9263781-9263800 | None:intergenic | 30.0% |
| !! | CGTGTTTTTATAGTGTCAAT+GGG | + | chr4.3:9263430-9263449 | None:intergenic | 30.0% |
| !! | GTGTTTTTATAGTGTCAATG+GGG | + | chr4.3:9263429-9263448 | None:intergenic | 30.0% |
| !! | TGTTGCTTTGTTAAGCATTA+TGG | - | chr4.3:9266818-9266837 | MS.gene030705:intron | 30.0% |
| !! | TTGAGTTGAAGTGTTAAGTA+TGG | + | chr4.3:9265199-9265218 | None:intergenic | 30.0% |
| !!! | AACATCATATGCCTCTTTTT+TGG | - | chr4.3:9264357-9264376 | MS.gene030705:CDS | 30.0% |
| !!! | ACATCATATGCCTCTTTTTT+GGG | - | chr4.3:9264358-9264377 | MS.gene030705:CDS | 30.0% |
| !!! | CTATATTTTTTGGAAAGACG+AGG | - | chr4.3:9263624-9263643 | MS.gene030705:CDS | 30.0% |
| !!! | TGTAATTTTTTGTGGATGGT+AGG | - | chr4.3:9266729-9266748 | MS.gene030705:intron | 30.0% |
| AAACAAAATATCACAGGTGC+GGG | + | chr4.3:9265701-9265720 | None:intergenic | 35.0% | |
| AAACAGGACTAAATCTTACC+TGG | + | chr4.3:9266950-9266969 | None:intergenic | 35.0% | |
| AAAGTGCGTAAGAAGTCAAA+TGG | + | chr4.3:9262779-9262798 | None:intergenic | 35.0% | |
| AAATGGTATACCACATCACA+AGG | + | chr4.3:9266857-9266876 | None:intergenic | 35.0% | |
| AATTTAGTAGCATGGATTCG+AGG | - | chr4.3:9266044-9266063 | MS.gene030705:intron | 35.0% | |
| ACAGATTAAGAACTCCTTGT+TGG | - | chr4.3:9264263-9264282 | MS.gene030705:intron | 35.0% | |
| ACAGTTAAAGCATAAGCTCA+TGG | + | chr4.3:9266319-9266338 | None:intergenic | 35.0% | |
| ACTATTAAAGAGTCCCACAT+CGG | + | chr4.3:9264538-9264557 | None:intergenic | 35.0% | |
| ATAGGAACTTCGTAAATGAG+TGG | + | chr4.3:9267044-9267063 | None:intergenic | 35.0% | |
| ATATATGAATGAGGGATTGG+GGG | + | chr4.3:9263228-9263247 | None:intergenic | 35.0% | |
| ATCGAAACATGTGCATAAGT+TGG | + | chr4.3:9262202-9262221 | None:intergenic | 35.0% | |
| ATGTAAAACCCCATCATATC+GGG | + | chr4.3:9264309-9264328 | None:intergenic | 35.0% | |
| ATTATCCTGTCTATGTTTCG+TGG | - | chr4.3:9264582-9264601 | MS.gene030705:intron | 35.0% | |
| CAAAAGTTATTGGCAAGCAT+AGG | - | chr4.3:9264059-9264078 | MS.gene030705:intron | 35.0% | |
| CAAATTATGTTCTACAGCCT+TGG | - | chr4.3:9267222-9267241 | MS.gene030705:intron | 35.0% | |
| CATATATGAATGAGGGATTG+GGG | + | chr4.3:9263229-9263248 | None:intergenic | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | - | chr4.3:9264501-9264520 | MS.gene030705:intron | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | + | chr4.3:9264504-9264523 | None:intergenic | 35.0% | |
| CGAAAGAAGCCAAAAGTTAT+TGG | - | chr4.3:9264049-9264068 | MS.gene030705:intron | 35.0% | |
| CGCCTTAAAGTACAAACTTA+AGG | + | chr4.3:9264613-9264632 | None:intergenic | 35.0% | |
| CTTCACTGCATATATGAATG+AGG | + | chr4.3:9263237-9263256 | None:intergenic | 35.0% | |
| GACAATGTGTTTATAAGTGG+GGG | + | chr4.3:9264501-9264520 | None:intergenic | 35.0% | |
| GACTTCTTACGCACTTTATT+CGG | - | chr4.3:9262782-9262801 | MS.gene030705:intron | 35.0% | |
| GATGTAAAACCCCATCATAT+CGG | + | chr4.3:9264310-9264329 | None:intergenic | 35.0% | |
| GCAAGCATAATTTAGTAGCA+TGG | - | chr4.3:9266036-9266055 | MS.gene030705:intron | 35.0% | |
| GCATATATGAATGAGGGATT+GGG | + | chr4.3:9263230-9263249 | None:intergenic | 35.0% | |
| GTATCAATAAGTCTCCAACA+AGG | + | chr4.3:9264280-9264299 | None:intergenic | 35.0% | |
| TAGGAACTTCGTAAATGAGT+GGG | + | chr4.3:9267043-9267062 | None:intergenic | 35.0% | |
| TATCTTTCTGAATTTGCCCA+AGG | + | chr4.3:9267242-9267261 | None:intergenic | 35.0% | |
| TCAATGAGTCAATCCAAACA+CGG | - | chr4.3:9262278-9262297 | MS.gene030705:CDS | 35.0% | |
| TCCAATACAAGCCAAATAGA+TGG | + | chr4.3:9265273-9265292 | None:intergenic | 35.0% | |
| TCTGGCTAATTATGGTTATG+TGG | - | chr4.3:9265245-9265264 | MS.gene030705:intron | 35.0% | |
| TGCATATATGAATGAGGGAT+TGG | + | chr4.3:9263231-9263250 | None:intergenic | 35.0% | |
| TGTCATCAAGACAAGGTTAA+TGG | - | chr4.3:9266923-9266942 | MS.gene030705:intron | 35.0% | |
| TTTAAACTTCCTTAGACTGC+AGG | - | chr4.3:9265393-9265412 | MS.gene030705:intron | 35.0% | |
| TTTAGCCCTATTTGAGTAGA+AGG | - | chr4.3:9263180-9263199 | MS.gene030705:CDS | 35.0% | |
| TTTCTGCTATCAAAGCGAAA+AGG | - | chr4.3:9262855-9262874 | MS.gene030705:intron | 35.0% | |
| TTTGTGGATGGTAGGTAAAT+AGG | - | chr4.3:9266737-9266756 | MS.gene030705:intron | 35.0% | |
| ! | AACCATTTGAGGCCTAAAAA+AGG | + | chr4.3:9263117-9263136 | None:intergenic | 35.0% |
| ! | AAGTATGGGACTTGTTCTAA+AGG | + | chr4.3:9265184-9265203 | None:intergenic | 35.0% |
| ! | ACCATTTGAGGCCTAAAAAA+GGG | + | chr4.3:9263116-9263135 | None:intergenic | 35.0% |
| ! | AGAAGTCAAATGGCTTTTCT+TGG | + | chr4.3:9262769-9262788 | None:intergenic | 35.0% |
| ! | AGTATGGGACTTGTTCTAAA+GGG | + | chr4.3:9265183-9265202 | None:intergenic | 35.0% |
| ! | AGTGATGATGTGAAACATAC+CGG | + | chr4.3:9261998-9262017 | None:intergenic | 35.0% |
| ! | CAAAACTGAATAGCATCGAA+GGG | + | chr4.3:9265789-9265808 | None:intergenic | 35.0% |
| ! | CTATGCTTGCCAATAACTTT+TGG | + | chr4.3:9264061-9264080 | None:intergenic | 35.0% |
| ! | GCACCAATAATTGCATTTTC+TGG | + | chr4.3:9266227-9266246 | None:intergenic | 35.0% |
| ! | TCGCTTTGATAGCAGAAAAA+TGG | + | chr4.3:9262853-9262872 | None:intergenic | 35.0% |
| ! | TCGTTTAGGTTATATGCTTG+CGG | - | chr4.3:9265824-9265843 | MS.gene030705:intron | 35.0% |
| ! | TCTTTTGCATCTGTTAGTGT+GGG | - | chr4.3:9262743-9262762 | MS.gene030705:intron | 35.0% |
| ! | TGTTCGCTTTATTGCATCTA+GGG | - | chr4.3:9265601-9265620 | MS.gene030705:intron | 35.0% |
| ! | TTCTTTTGCATCTGTTAGTG+TGG | - | chr4.3:9262742-9262761 | MS.gene030705:intron | 35.0% |
| ! | TTGCTATTAAGAAAAGGCCA+TGG | + | chr4.3:9263810-9263829 | None:intergenic | 35.0% |
| !! | TGTACTTTAAGGCGTAGTAA+TGG | - | chr4.3:9264619-9264638 | MS.gene030705:intron | 35.0% |
| !! | TTGATTCGGCAGAGTAAATA+CGG | + | chr4.3:9266400-9266419 | None:intergenic | 35.0% |
| !! | TTGCTTTAAAGTCGTAAGTC+TGG | - | chr4.3:9265227-9265246 | MS.gene030705:intron | 35.0% |
| !! | TTTTGGAAAGACGAGGAAAA+AGG | - | chr4.3:9263631-9263650 | MS.gene030705:CDS | 35.0% |
| !!! | CATCATATGCCTCTTTTTTG+GGG | - | chr4.3:9264359-9264378 | MS.gene030705:CDS | 35.0% |
| !!! | GGTATGGATCTTTTTTACTG+CGG | - | chr4.3:9265757-9265776 | MS.gene030705:intron | 35.0% |
| !!! | GTATGGATCTTTTTTACTGC+GGG | - | chr4.3:9265758-9265777 | MS.gene030705:intron | 35.0% |
| AACAAAATATCACAGGTGCG+GGG | + | chr4.3:9265700-9265719 | None:intergenic | 40.0% | |
| AAGATGGAACCCCAAAAAAG+AGG | + | chr4.3:9264371-9264390 | None:intergenic | 40.0% | |
| AAGTGGTGTAGTTATAGCTC+CGG | + | chr4.3:9266901-9266920 | None:intergenic | 40.0% | |
| AATCTTGCTAACGAGCTTGA+TGG | - | chr4.3:9263341-9263360 | MS.gene030705:intron | 40.0% | |
| ACCATGCACAAATGAAGTAG+TGG | + | chr4.3:9266156-9266175 | None:intergenic | 40.0% | |
| AGCTTGATGGAATTATGCAG+AGG | - | chr4.3:9263354-9263373 | MS.gene030705:intron | 40.0% | |
| CACTATAAAAACACGTCTGC+AGG | - | chr4.3:9263435-9263454 | MS.gene030705:intron | 40.0% | |
| CACTTGATGTCATCAAGACA+AGG | - | chr4.3:9266916-9266935 | MS.gene030705:intron | 40.0% | |
| CTAAACGAATCTGCTCATAG+AGG | + | chr4.3:9265812-9265831 | None:intergenic | 40.0% | |
| CTCTATGAGCAGATTCGTTT+AGG | - | chr4.3:9265810-9265829 | MS.gene030705:intron | 40.0% | |
| CTGCAAAGCAGAAATTGCTA+AGG | - | chr4.3:9265070-9265089 | MS.gene030705:intron | 40.0% | |
| CTTAGCAATTTCTGCTTTGC+AGG | + | chr4.3:9265072-9265091 | None:intergenic | 40.0% | |
| GAAAGGCCTTTATTCTGGAT+TGG | - | chr4.3:9263922-9263941 | MS.gene030705:intron | 40.0% | |
| GAGAATTAAGCAACCTCTGT+TGG | + | chr4.3:9265456-9265475 | None:intergenic | 40.0% | |
| GCTTGATGGAATTATGCAGA+GGG | - | chr4.3:9263355-9263374 | MS.gene030705:intron | 40.0% | |
| GTCAGCCTTCTACTCAAATA+GGG | + | chr4.3:9263188-9263207 | None:intergenic | 40.0% | |
| GTCGTAAGTCTGGCTAATTA+TGG | - | chr4.3:9265237-9265256 | MS.gene030705:intron | 40.0% | |
| GTTATGTGGAGCCATCTATT+TGG | - | chr4.3:9265259-9265278 | MS.gene030705:intron | 40.0% | |
| TAGAGGCTTGATATCCACAT+TGG | + | chr4.3:9263557-9263576 | None:intergenic | 40.0% | |
| TATTTCCAATCACAGGGGTA+TGG | - | chr4.3:9265741-9265760 | MS.gene030705:intron | 40.0% | |
| TCAAGCAACGAATGCAAACT+GGG | - | chr4.3:9265555-9265574 | MS.gene030705:intron | 40.0% | |
| TCCACTACTTCATTTGTGCA+TGG | - | chr4.3:9266152-9266171 | MS.gene030705:intron | 40.0% | |
| TGCGCCTACAAGAAACAAAA+TGG | + | chr4.3:9266874-9266893 | None:intergenic | 40.0% | |
| TTCAGAAAGATACAGCCACA+TGG | - | chr4.3:9267250-9267269 | MS.gene030705:intron | 40.0% | |
| TTTAACTGTGCTTCAAGCTG+AGG | - | chr4.3:9266330-9266349 | MS.gene030705:intron | 40.0% | |
| TTTGTGACTCTTGAGAATCG+TGG | - | chr4.3:9264421-9264440 | MS.gene030705:intron | 40.0% | |
| ! | CATTTTCTTTAATGCTCCGC+AGG | - | chr4.3:9265529-9265548 | MS.gene030705:intron | 40.0% |
| ! | CTGTTCGCTTTATTGCATCT+AGG | - | chr4.3:9265600-9265619 | MS.gene030705:intron | 40.0% |
| ! | CTTGTCTTGATGACATCAAG+TGG | + | chr4.3:9266918-9266937 | None:intergenic | 40.0% |
| ! | GCAAAACTGAATAGCATCGA+AGG | + | chr4.3:9265790-9265809 | None:intergenic | 40.0% |
| ! | GGAAACGTTTTGTACTCTCA+AGG | + | chr4.3:9267388-9267407 | None:intergenic | 40.0% |
| ! | TCTGAGTGCTTTTGCTCATT+TGG | - | chr4.3:9265107-9265126 | MS.gene030705:intron | 40.0% |
| !! | AACTCACAAGCCAGTTTTGT+GGG | + | chr4.3:9264470-9264489 | None:intergenic | 40.0% |
| !! | AGGGCATCTGCTTTATTTGT+TGG | - | chr4.3:9265036-9265055 | MS.gene030705:intron | 40.0% |
| !! | ATACCTTCAGAAAAGCACCT+GGG | + | chr4.3:9267145-9267164 | None:intergenic | 40.0% |
| !! | ATTCCCTTGTATTGGTTTGC+AGG | + | chr4.3:9267086-9267105 | None:intergenic | 40.0% |
| !! | GCCATCTATTTGGCTTGTAT+TGG | - | chr4.3:9265269-9265288 | MS.gene030705:intron | 40.0% |
| !! | GGGTTTTGTAAGGATGACTT+AGG | - | chr4.3:9262440-9262459 | MS.gene030705:intron | 40.0% |
| !!! | ACCCTTTTTTAGGCCTCAAA+TGG | - | chr4.3:9263112-9263131 | MS.gene030705:intron | 40.0% |
| !!! | GCAAAAGCACTCAGATTTTC+AGG | + | chr4.3:9265102-9265121 | None:intergenic | 40.0% |
| AAAACCCGCTGGTAAGATGA+GGG | + | chr4.3:9262427-9262446 | None:intergenic | 45.0% | |
| AAGATCCATACCCCTGTGAT+TGG | + | chr4.3:9265749-9265768 | None:intergenic | 45.0% | |
| ACACTCCACGAAACATAGAC+AGG | + | chr4.3:9264590-9264609 | None:intergenic | 45.0% | |
| ACATATGAAGGGATCGCAAC+TGG | + | chr4.3:9262967-9262986 | None:intergenic | 45.0% | |
| ATACTCCTGTCCCGATATGA+TGG | - | chr4.3:9264296-9264315 | MS.gene030705:intron | 45.0% | |
| ATTATTAAGGAAGAGGGCCC+AGG | - | chr4.3:9267125-9267144 | MS.gene030705:intron | 45.0% | |
| ATTCGTTGCTTGACAACCTG+CGG | + | chr4.3:9265548-9265567 | None:intergenic | 45.0% | |
| CAAGACAAGGTTAATGGTCC+AGG | - | chr4.3:9266929-9266948 | MS.gene030705:intron | 45.0% | |
| CACCACCATATTTCAGACAC+GGG | - | chr4.3:9266644-9266663 | MS.gene030705:CDS | 45.0% | |
| CACGAGAGGATATGTGTATC+AGG | + | chr4.3:9266976-9266995 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+TGG | - | chr4.3:9264457-9264476 | MS.gene030705:intron | 45.0% | |
| GAAACATCATGCTATCCACG+AGG | + | chr4.3:9263980-9263999 | None:intergenic | 45.0% | |
| GATGATGTGAAACATACCGG+AGG | + | chr4.3:9261995-9262014 | None:intergenic | 45.0% | |
| GCACCACCATATTTCAGACA+CGG | - | chr4.3:9266643-9266662 | MS.gene030705:CDS | 45.0% | |
| GCAGAGTAATTAGACACGAG+AGG | + | chr4.3:9266990-9267009 | None:intergenic | 45.0% | |
| GGACCTGCAAACCAATACAA+GGG | - | chr4.3:9267080-9267099 | MS.gene030705:intron | 45.0% | |
| GGTCAGCCTTCTACTCAAAT+AGG | + | chr4.3:9263189-9263208 | None:intergenic | 45.0% | |
| GTCAAGCAACGAATGCAAAC+TGG | - | chr4.3:9265554-9265573 | MS.gene030705:intron | 45.0% | |
| GTGGGGTTGTGTTAGGATTT+GGG | + | chr4.3:9264452-9264471 | None:intergenic | 45.0% | |
| TACTCCTGTCCCGATATGAT+GGG | - | chr4.3:9264297-9264316 | MS.gene030705:intron | 45.0% | |
| TCCCTGCCAATCCAGAATAA+AGG | + | chr4.3:9263931-9263950 | None:intergenic | 45.0% | |
| TCCTCTTACACTCTCCGTTA+CGG | - | chr4.3:9261957-9261976 | MS.gene030705:CDS | 45.0% | |
| TCGTGAATATAGGCCGTGTT+TGG | + | chr4.3:9262294-9262313 | None:intergenic | 45.0% | |
| TGGGCCCTCTTCCTTAATAA+TGG | + | chr4.3:9267126-9267145 | None:intergenic | 45.0% | |
| TGTGGGGTTGTGTTAGGATT+TGG | + | chr4.3:9264453-9264472 | None:intergenic | 45.0% | |
| TTTCTTGTAGGCGCACTAAC+CGG | - | chr4.3:9266879-9266898 | MS.gene030705:intron | 45.0% | |
| TTTGCCAGAAAGGTCTGAGA+GGG | + | chr4.3:9265959-9265978 | None:intergenic | 45.0% | |
| ! | AAGCTCCCGTGTCTGAAATA+TGG | + | chr4.3:9266652-9266671 | None:intergenic | 45.0% |
| ! | AGAGTGCTTTGGATAGGCAT+AGG | - | chr4.3:9267341-9267360 | MS.gene030705:intron | 45.0% |
| ! | ATGCCTATCCAAAGCACTCT+TGG | + | chr4.3:9267341-9267360 | None:intergenic | 45.0% |
| ! | CAACTCACAAGCCAGTTTTG+TGG | + | chr4.3:9264471-9264490 | None:intergenic | 45.0% |
| ! | CACTGAGCTAGTTTAGGTGT+AGG | + | chr4.3:9267425-9267444 | None:intergenic | 45.0% |
| ! | CCTATTTTCCTCCTCCTCAA+GGG | - | chr4.3:9267059-9267078 | MS.gene030705:intron | 45.0% |
| ! | CGCTTTATTGCATCTAGGGA+GGG | - | chr4.3:9265605-9265624 | MS.gene030705:intron | 45.0% |
| ! | TCCTATTTTCCTCCTCCTCA+AGG | - | chr4.3:9267058-9267077 | MS.gene030705:intron | 45.0% |
| ! | TCGCTTTATTGCATCTAGGG+AGG | - | chr4.3:9265604-9265623 | MS.gene030705:intron | 45.0% |
| ! | TTTTGTTCGCGTTCCAACAG+AGG | - | chr4.3:9265440-9265459 | MS.gene030705:intron | 45.0% |
| !! | ACTCACAAGCCAGTTTTGTG+GGG | + | chr4.3:9264469-9264488 | None:intergenic | 45.0% |
| !! | CAAAACTGGCTTGTGAGTTG+AGG | - | chr4.3:9264471-9264490 | MS.gene030705:intron | 45.0% |
| !! | CAGTTTTGTGGGGTTGTGTT+AGG | + | chr4.3:9264459-9264478 | None:intergenic | 45.0% |
| !! | CATACCTTCAGAAAAGCACC+TGG | + | chr4.3:9267146-9267165 | None:intergenic | 45.0% |
| !! | GCCTTTATTCTGGATTGGCA+GGG | - | chr4.3:9263927-9263946 | MS.gene030705:intron | 45.0% |
| !! | TCTTACCAGCGGGTTTTGTA+AGG | - | chr4.3:9262430-9262449 | MS.gene030705:intron | 45.0% |
| !! | TTGTTTTGTTAGGCTGCTCG+CGG | - | chr4.3:9263881-9263900 | MS.gene030705:intron | 45.0% |
| !!! | AAAAATAATTTAGTTTTATT+TGG | - | chr4.3:9266569-9266588 | MS.gene030705:intron | 5.0% |
| AAACCCCATCATATCGGGAC+AGG | + | chr4.3:9264304-9264323 | None:intergenic | 50.0% | |
| AAACCCGCTGGTAAGATGAG+GGG | + | chr4.3:9262426-9262445 | None:intergenic | 50.0% | |
| ACAACTGGAGTTGGGTTACC+TGG | - | chr4.3:9264197-9264216 | MS.gene030705:intron | 50.0% | |
| ACTCCTGTCCCGATATGATG+GGG | - | chr4.3:9264298-9264317 | MS.gene030705:intron | 50.0% | |
| ACTTTGCATCACTGCCAGCT+AGG | - | chr4.3:9263578-9263597 | MS.gene030705:intron | 50.0% | |
| AGATGCAGCAATGCCTCCTA+TGG | + | chr4.3:9265421-9265440 | None:intergenic | 50.0% | |
| AGGCCATCTCTTATCCGATG+TGG | - | chr4.3:9264521-9264540 | MS.gene030705:intron | 50.0% | |
| ATACCCCTCATCTTACCAGC+GGG | - | chr4.3:9262420-9262439 | MS.gene030705:intron | 50.0% | |
| ATATCACAGGTGCGGGGAAT+AGG | + | chr4.3:9265694-9265713 | None:intergenic | 50.0% | |
| CAAAACCCGCTGGTAAGATG+AGG | + | chr4.3:9262428-9262447 | None:intergenic | 50.0% | |
| CAAAACGTTTCCTTGCCGAG+AGG | - | chr4.3:9267396-9267415 | MS.gene030705:intron | 50.0% | |
| CCACAACAATCAAGCCTAGC+TGG | + | chr4.3:9263595-9263614 | None:intergenic | 50.0% | |
| CCAGCTAGGCTTGATTGTTG+TGG | - | chr4.3:9263592-9263611 | MS.gene030705:CDS | 50.0% | |
| CCCTTGAGGAGGAGGAAAAT+AGG | + | chr4.3:9267062-9267081 | None:intergenic | 50.0% | |
| GATACCCCTCATCTTACCAG+CGG | - | chr4.3:9262419-9262438 | MS.gene030705:intron | 50.0% | |
| GCAACTGGTGTGTGTGAGAA+CGG | + | chr4.3:9262952-9262971 | None:intergenic | 50.0% | |
| GCGAACAGCATTAGAAGCTG+AGG | + | chr4.3:9265588-9265607 | None:intergenic | 50.0% | |
| GGCAGAATCTTGCACCGTAA+CGG | + | chr4.3:9261974-9261993 | None:intergenic | 50.0% | |
| GGCAGTGATGCAAAGTCTAG+AGG | + | chr4.3:9263574-9263593 | None:intergenic | 50.0% | |
| GGCCATCTCTTATCCGATGT+GGG | - | chr4.3:9264522-9264541 | MS.gene030705:intron | 50.0% | |
| GGGACCTGCAAACCAATACA+AGG | - | chr4.3:9267079-9267098 | MS.gene030705:intron | 50.0% | |
| GGGGGATAGCATCTTAGTGT+TGG | + | chr4.3:9263210-9263229 | None:intergenic | 50.0% | |
| GTCATCCTTACAAAACCCGC+TGG | + | chr4.3:9262438-9262457 | None:intergenic | 50.0% | |
| GTCCCACATCGGATAAGAGA+TGG | + | chr4.3:9264527-9264546 | None:intergenic | 50.0% | |
| GTTTGCCAGAAAGGTCTGAG+AGG | + | chr4.3:9265960-9265979 | None:intergenic | 50.0% | |
| TACCACATCACAAGGCTGCT+AGG | + | chr4.3:9266849-9266868 | None:intergenic | 50.0% | |
| TGCTATCCACGAGGATCTCA+CGG | + | chr4.3:9263971-9263990 | None:intergenic | 50.0% | |
| TTGCCAGAAAGGTCTGAGAG+GGG | + | chr4.3:9265958-9265977 | None:intergenic | 50.0% | |
| TTTAGGTGTAGGACGCCTCT+CGG | + | chr4.3:9267414-9267433 | None:intergenic | 50.0% | |
| ! | ACCGTAACGGAGAGTGTAAG+AGG | + | chr4.3:9261961-9261980 | None:intergenic | 50.0% |
| ! | CTCCCGTGTCTGAAATATGG+TGG | + | chr4.3:9266649-9266668 | None:intergenic | 50.0% |
| ! | CTGCAGCACTGAGCTAGTTT+AGG | + | chr4.3:9267431-9267450 | None:intergenic | 50.0% |
| ! | GCATCTAGGGAGGGCTTTAA+AGG | - | chr4.3:9265614-9265633 | MS.gene030705:intron | 50.0% |
| ! | GTGCTTTGGATAGGCATAGG+TGG | - | chr4.3:9267344-9267363 | MS.gene030705:intron | 50.0% |
| ! | TCAATAGTGTTGGGCGTGAG+AGG | - | chr4.3:9262325-9262344 | MS.gene030705:CDS | 50.0% |
| !! | ATTGGTTTGCAGGTCCCTTG+AGG | + | chr4.3:9267076-9267095 | None:intergenic | 50.0% |
| !! | GGCCTTTATTCTGGATTGGC+AGG | - | chr4.3:9263926-9263945 | MS.gene030705:intron | 50.0% |
| !! | GTATTGGGCCAAGAGTGCTT+TGG | - | chr4.3:9267330-9267349 | MS.gene030705:intron | 50.0% |
| !! | TATGCAGAGGGTGTTATCGC+AGG | - | chr4.3:9263367-9263386 | MS.gene030705:intron | 50.0% |
| ACGGTGCAAGATTCTGCCTC+CGG | - | chr4.3:9261976-9261995 | MS.gene030705:CDS | 55.0% | |
| CCTATGGCACCTGCAGTCTA+AGG | + | chr4.3:9265405-9265424 | None:intergenic | 55.0% | |
| CTCACGGTAAGACACCAGCA+AGG | + | chr4.3:9263955-9263974 | None:intergenic | 55.0% | |
| GTCTTACCGTGAGATCCTCG+TGG | - | chr4.3:9263962-9263981 | MS.gene030705:intron | 55.0% | |
| GTGTGTGTGAGAACGGAGTG+AGG | + | chr4.3:9262945-9262964 | None:intergenic | 55.0% | |
| TGCCAGAAAGGTCTGAGAGG+GGG | + | chr4.3:9265957-9265976 | None:intergenic | 55.0% | |
| ! | CCTTAGACTGCAGGTGCCAT+AGG | - | chr4.3:9265402-9265421 | MS.gene030705:intron | 55.0% |
| ! | GTCCTAGCAGCCTTGTGATG+TGG | - | chr4.3:9266844-9266863 | MS.gene030705:intron | 55.0% |
| ! | GTTATCGCAGGAGGTACAGC+TGG | - | chr4.3:9263379-9263398 | MS.gene030705:intron | 55.0% |
| ! | GTTGGGCGTGAGAGGTGTAT+TGG | - | chr4.3:9262333-9262352 | MS.gene030705:intron | 55.0% |
| ! | TAGACTGCAGGTGCCATAGG+AGG | - | chr4.3:9265405-9265424 | MS.gene030705:intron | 55.0% |
| ! | TTTTGTTAGGCTGCTCGCGG+AGG | - | chr4.3:9263884-9263903 | MS.gene030705:intron | 55.0% |
| !! | GGGCCAAGAGTGCTTTGGAT+AGG | - | chr4.3:9267335-9267354 | MS.gene030705:intron | 55.0% |
| GCCAGAAAGGTCTGAGAGGG+GGG | + | chr4.3:9265956-9265975 | None:intergenic | 60.0% | |
| GGTTTGCAGGTCCCTTGAGG+AGG | + | chr4.3:9267073-9267092 | None:intergenic | 60.0% | |
| TCCCCCCTCTCAGACCTTTC+TGG | - | chr4.3:9265952-9265971 | MS.gene030705:intron | 60.0% | |
| TTGCAGGTCCCTTGAGGAGG+AGG | + | chr4.3:9267070-9267089 | None:intergenic | 60.0% | |
| ! | GGATTGGCAGGGAACCTTGC+TGG | - | chr4.3:9263938-9263957 | MS.gene030705:intron | 60.0% |
| ! | GGGCCCAGGTGCTTTTCTGA+AGG | - | chr4.3:9267139-9267158 | MS.gene030705:intron | 60.0% |
| !! | GCAGAGGGTGTTATCGCAGG+AGG | - | chr4.3:9263370-9263389 | MS.gene030705:intron | 60.0% |
| GTGTAGGACGCCTCTCGGCA+AGG | + | chr4.3:9267409-9267428 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 9261952 | 9267475 | 9261952 | ID=MS.gene030705 |
| chr4.3 | mRNA | 9261952 | 9267475 | 9261952 | ID=MS.gene030705.t1;Parent=MS.gene030705 |
| chr4.3 | exon | 9267430 | 9267475 | 9267430 | ID=MS.gene030705.t1.exon1;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9267430 | 9267475 | 9267430 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9266624 | 9266725 | 9266624 | ID=MS.gene030705.t1.exon2;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9266624 | 9266725 | 9266624 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9265971 | 9266053 | 9265971 | ID=MS.gene030705.t1.exon3;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9265971 | 9266053 | 9265971 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9265458 | 9265534 | 9265458 | ID=MS.gene030705.t1.exon4;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9265458 | 9265534 | 9265458 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9264299 | 9264389 | 9264299 | ID=MS.gene030705.t1.exon5;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9264299 | 9264389 | 9264299 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9263966 | 9264019 | 9263966 | ID=MS.gene030705.t1.exon6;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9263966 | 9264019 | 9263966 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9263781 | 9263876 | 9263781 | ID=MS.gene030705.t1.exon7;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9263781 | 9263876 | 9263781 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9263582 | 9263671 | 9263582 | ID=MS.gene030705.t1.exon8;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9263582 | 9263671 | 9263582 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9263173 | 9263224 | 9263173 | ID=MS.gene030705.t1.exon9;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9263173 | 9263224 | 9263173 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9262477 | 9262538 | 9262477 | ID=MS.gene030705.t1.exon10;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9262477 | 9262538 | 9262477 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9262267 | 9262347 | 9262267 | ID=MS.gene030705.t1.exon11;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9262267 | 9262347 | 9262267 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| chr4.3 | exon | 9261952 | 9262098 | 9261952 | ID=MS.gene030705.t1.exon12;Parent=MS.gene030705.t1 |
| chr4.3 | CDS | 9261952 | 9262098 | 9261952 | ID=cds.MS.gene030705.t1;Parent=MS.gene030705.t1 |
| Gene Sequence |
| Protein sequence |
