Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064047.t1 | GAU33546.1 | 91.1 | 270 | 14 | 1 | 7 | 266 | 47 | 316 | 1.50E-132 | 482.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064047.t1 | F4JU70 | 63.8 | 271 | 87 | 2 | 7 | 266 | 46 | 316 | 1.5e-93 | 344.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064047.t1 | A0A2Z6MLZ0 | 91.1 | 270 | 14 | 1 | 7 | 266 | 47 | 316 | 1.1e-132 | 482.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064047.t1 | MTR_6g091800 | 89.377 | 273 | 19 | 1 | 6 | 268 | 43 | 315 | 2.64e-178 | 493 |
MS.gene064047.t1 | MTR_6g091800 | 26.923 | 208 | 125 | 5 | 67 | 262 | 18 | 210 | 7.25e-13 | 67.8 |
MS.gene064047.t1 | MTR_6g091800 | 82.492 | 297 | 18 | 2 | 6 | 268 | 43 | 339 | 4.02e-173 | 481 |
MS.gene064047.t1 | MTR_6g034145 | 90.038 | 261 | 16 | 1 | 18 | 268 | 1 | 261 | 7.38e-173 | 477 |
MS.gene064047.t1 | MTR_6g092210 | 86.973 | 261 | 18 | 2 | 18 | 268 | 1 | 255 | 8.81e-163 | 451 |
MS.gene064047.t1 | MTR_6g091800 | 81.481 | 270 | 16 | 2 | 6 | 241 | 43 | 312 | 1.45e-153 | 431 |
MS.gene064047.t1 | MTR_6g091800 | 75.458 | 273 | 16 | 2 | 6 | 268 | 43 | 274 | 1.04e-140 | 396 |
MS.gene064047.t1 | MTR_6g091800 | 26.923 | 208 | 125 | 5 | 67 | 262 | 18 | 210 | 4.08e-13 | 68.2 |
MS.gene064047.t1 | MTR_6g091800 | 69.697 | 297 | 15 | 3 | 6 | 268 | 43 | 298 | 1.31e-135 | 384 |
MS.gene064047.t1 | MTR_6g091800 | 86.256 | 211 | 19 | 1 | 6 | 206 | 43 | 253 | 5.18e-129 | 367 |
MS.gene064047.t1 | MTR_6g091800 | 26.923 | 208 | 125 | 5 | 67 | 262 | 18 | 210 | 3.91e-13 | 68.2 |
MS.gene064047.t1 | MTR_6g091800 | 77.872 | 235 | 18 | 2 | 6 | 206 | 43 | 277 | 7.61e-124 | 354 |
MS.gene064047.t1 | MTR_6g091910 | 86.139 | 202 | 26 | 1 | 67 | 268 | 18 | 217 | 1.48e-123 | 351 |
MS.gene064047.t1 | MTR_3g104600 | 50.545 | 275 | 119 | 4 | 7 | 264 | 60 | 334 | 6.88e-90 | 270 |
MS.gene064047.t1 | MTR_6g091800 | 84.507 | 142 | 12 | 1 | 6 | 137 | 43 | 184 | 7.43e-81 | 241 |
MS.gene064047.t1 | MTR_6g091800 | 72.892 | 166 | 11 | 2 | 6 | 137 | 43 | 208 | 7.96e-76 | 229 |
MS.gene064047.t1 | MTR_5g009500 | 35.385 | 260 | 132 | 6 | 26 | 261 | 93 | 340 | 2.61e-41 | 145 |
MS.gene064047.t1 | MTR_5g009500 | 23.645 | 203 | 130 | 4 | 67 | 259 | 37 | 224 | 1.84e-14 | 72.8 |
MS.gene064047.t1 | MTR_8g027975 | 32.061 | 262 | 140 | 5 | 26 | 261 | 106 | 355 | 4.12e-38 | 137 |
MS.gene064047.t1 | MTR_8g027975 | 25.455 | 220 | 140 | 5 | 50 | 259 | 32 | 237 | 1.36e-16 | 79.0 |
MS.gene064047.t1 | MTR_3g098460 | 31.799 | 239 | 144 | 4 | 26 | 259 | 256 | 480 | 2.96e-35 | 132 |
MS.gene064047.t1 | MTR_3g098460 | 24.742 | 194 | 123 | 5 | 68 | 257 | 205 | 379 | 3.09e-12 | 66.6 |
MS.gene064047.t1 | MTR_7g084400 | 31.174 | 247 | 144 | 4 | 20 | 259 | 258 | 485 | 1.87e-32 | 124 |
MS.gene064047.t1 | MTR_7g084400 | 25.510 | 196 | 121 | 5 | 68 | 257 | 213 | 389 | 6.85e-14 | 71.6 |
MS.gene064047.t1 | MTR_8g096050 | 31.381 | 239 | 145 | 4 | 26 | 259 | 278 | 502 | 6.52e-32 | 123 |
MS.gene064047.t1 | MTR_8g096050 | 31.915 | 141 | 84 | 3 | 26 | 165 | 376 | 505 | 3.65e-15 | 75.1 |
MS.gene064047.t1 | MTR_8g096050 | 24.615 | 195 | 122 | 5 | 68 | 257 | 227 | 401 | 6.66e-11 | 62.4 |
MS.gene064047.t1 | MTR_1g012030 | 31.092 | 238 | 143 | 4 | 26 | 259 | 190 | 410 | 3.33e-31 | 120 |
MS.gene064047.t1 | MTR_1g012030 | 26.667 | 210 | 127 | 5 | 62 | 266 | 132 | 319 | 9.61e-14 | 70.9 |
MS.gene064047.t1 | MTR_7g064980 | 31.301 | 246 | 139 | 6 | 26 | 259 | 87 | 314 | 1.42e-30 | 116 |
MS.gene064047.t1 | MTR_3g107510 | 30.081 | 246 | 149 | 5 | 26 | 266 | 173 | 400 | 9.58e-29 | 113 |
MS.gene064047.t1 | MTR_3g107510 | 25.616 | 203 | 125 | 4 | 68 | 266 | 122 | 302 | 1.90e-13 | 70.1 |
MS.gene064047.t1 | MTR_4g114320 | 28.631 | 241 | 144 | 5 | 26 | 259 | 175 | 394 | 2.02e-28 | 112 |
MS.gene064047.t1 | MTR_4g114320 | 25.854 | 205 | 126 | 6 | 68 | 267 | 123 | 306 | 6.33e-13 | 68.6 |
MS.gene064047.t1 | MTR_4g114320 | 29.878 | 164 | 95 | 4 | 3 | 165 | 253 | 397 | 6.57e-13 | 68.2 |
MS.gene064047.t1 | MTR_7g068340 | 28.980 | 245 | 140 | 5 | 26 | 265 | 147 | 362 | 1.03e-26 | 107 |
MS.gene064047.t1 | MTR_7g068340 | 25.824 | 182 | 116 | 4 | 81 | 259 | 100 | 265 | 2.57e-13 | 69.3 |
MS.gene064047.t1 | MTR_5g081150 | 29.630 | 243 | 148 | 4 | 26 | 259 | 93 | 321 | 3.80e-24 | 99.4 |
MS.gene064047.t1 | MTR_5g081150 | 28.311 | 219 | 132 | 7 | 50 | 257 | 16 | 220 | 3.04e-12 | 65.9 |
MS.gene064047.t1 | MTR_2g436930 | 25.391 | 256 | 157 | 4 | 26 | 260 | 83 | 325 | 8.74e-23 | 95.9 |
MS.gene064047.t1 | MTR_2g436930 | 29.612 | 206 | 128 | 6 | 61 | 256 | 8 | 206 | 3.87e-21 | 91.3 |
MS.gene064047.t1 | MTR_3g104500 | 27.547 | 265 | 159 | 9 | 6 | 261 | 83 | 323 | 6.15e-22 | 93.6 |
MS.gene064047.t1 | MTR_3g104500 | 25.121 | 207 | 143 | 5 | 67 | 267 | 33 | 233 | 7.60e-14 | 70.5 |
MS.gene064047.t1 | MTR_2g436930 | 25.101 | 247 | 151 | 4 | 35 | 260 | 2 | 235 | 1.21e-21 | 90.9 |
MS.gene064047.t1 | MTR_4g119770 | 26.848 | 257 | 152 | 6 | 26 | 260 | 84 | 326 | 1.36e-21 | 92.4 |
MS.gene064047.t1 | MTR_4g119770 | 26.866 | 201 | 132 | 4 | 66 | 256 | 12 | 207 | 5.83e-18 | 82.4 |
MS.gene064047.t1 | MTR_4g016730 | 28.745 | 247 | 135 | 7 | 26 | 265 | 149 | 361 | 1.88e-19 | 87.0 |
MS.gene064047.t1 | MTR_2g098070 | 27.350 | 234 | 156 | 5 | 26 | 256 | 127 | 349 | 2.11e-18 | 84.0 |
MS.gene064047.t1 | MTR_4g119770 | 26.866 | 201 | 132 | 4 | 66 | 256 | 12 | 207 | 2.87e-18 | 82.4 |
MS.gene064047.t1 | MTR_4g119770 | 27.083 | 192 | 111 | 4 | 26 | 202 | 84 | 261 | 6.52e-16 | 75.9 |
MS.gene064047.t1 | MTR_4g005330 | 23.735 | 257 | 155 | 8 | 27 | 261 | 52 | 289 | 8.53e-18 | 81.6 |
MS.gene064047.t1 | MTR_4g005330 | 23.735 | 257 | 155 | 8 | 27 | 261 | 118 | 355 | 9.80e-18 | 82.0 |
MS.gene064047.t1 | MTR_8g090210 | 27.692 | 260 | 147 | 7 | 26 | 263 | 161 | 401 | 1.69e-17 | 81.6 |
MS.gene064047.t1 | MTR_7g109135 | 27.165 | 254 | 160 | 6 | 13 | 259 | 71 | 306 | 3.87e-17 | 80.1 |
MS.gene064047.t1 | MTR_7g109135 | 29.126 | 206 | 133 | 6 | 66 | 268 | 20 | 215 | 6.71e-16 | 76.6 |
MS.gene064047.t1 | MTR_7g109135 | 26.971 | 241 | 154 | 5 | 26 | 259 | 3 | 228 | 6.12e-17 | 78.2 |
MS.gene064047.t1 | MTR_4g078545 | 28.395 | 243 | 160 | 5 | 20 | 259 | 130 | 361 | 1.27e-16 | 79.0 |
MS.gene064047.t1 | MTR_3g074490 | 27.907 | 258 | 145 | 7 | 26 | 261 | 167 | 405 | 2.18e-16 | 78.6 |
MS.gene064047.t1 | MTR_7g109135 | 29.947 | 187 | 109 | 5 | 80 | 259 | 36 | 207 | 6.15e-16 | 75.1 |
MS.gene064047.t1 | MTR_3g028590 | 27.917 | 240 | 159 | 5 | 20 | 256 | 148 | 376 | 1.13e-15 | 76.3 |
MS.gene064047.t1 | MTR_3g028590 | 27.917 | 240 | 159 | 5 | 20 | 256 | 152 | 380 | 1.29e-15 | 76.3 |
MS.gene064047.t1 | MTR_5g055410 | 29.814 | 161 | 104 | 4 | 100 | 253 | 141 | 299 | 5.71e-15 | 73.9 |
MS.gene064047.t1 | MTR_8g076760 | 23.611 | 216 | 140 | 5 | 64 | 266 | 109 | 312 | 5.71e-15 | 73.9 |
MS.gene064047.t1 | MTR_8g036880 | 26.939 | 245 | 166 | 5 | 15 | 256 | 152 | 386 | 7.87e-15 | 73.9 |
MS.gene064047.t1 | MTR_1g087840 | 26.250 | 240 | 156 | 7 | 26 | 259 | 79 | 303 | 2.64e-14 | 72.0 |
MS.gene064047.t1 | MTR_1g087840 | 28.421 | 190 | 125 | 5 | 81 | 268 | 32 | 212 | 1.74e-11 | 63.5 |
MS.gene064047.t1 | MTR_7g084400 | 25.510 | 196 | 121 | 5 | 68 | 257 | 207 | 383 | 5.64e-14 | 71.6 |
MS.gene064047.t1 | MTR_7g084400 | 30.460 | 174 | 94 | 5 | 20 | 182 | 252 | 409 | 1.38e-13 | 70.5 |
MS.gene064047.t1 | MTR_7g109135 | 25.984 | 254 | 156 | 6 | 13 | 259 | 71 | 299 | 2.50e-13 | 68.9 |
MS.gene064047.t1 | MTR_7g109135 | 27.184 | 206 | 130 | 6 | 66 | 268 | 20 | 208 | 1.30e-11 | 63.9 |
MS.gene064047.t1 | MTR_5g030530 | 30.500 | 200 | 119 | 8 | 67 | 256 | 7 | 196 | 3.06e-13 | 68.6 |
MS.gene064047.t1 | MTR_7g117030 | 25.385 | 260 | 159 | 10 | 20 | 259 | 91 | 335 | 8.11e-13 | 67.8 |
MS.gene064047.t1 | MTR_5g081150 | 28.311 | 219 | 132 | 7 | 50 | 257 | 16 | 220 | 1.04e-12 | 66.6 |
MS.gene064047.t1 | MTR_5g081150 | 28.824 | 170 | 98 | 4 | 26 | 186 | 93 | 248 | 8.79e-12 | 63.9 |
MS.gene064047.t1 | MTR_5g081150 | 28.311 | 219 | 132 | 7 | 50 | 257 | 16 | 220 | 1.10e-12 | 66.6 |
MS.gene064047.t1 | MTR_5g081150 | 28.824 | 170 | 98 | 4 | 26 | 186 | 93 | 248 | 1.00e-11 | 63.9 |
MS.gene064047.t1 | MTR_8g098240 | 24.034 | 233 | 157 | 5 | 26 | 257 | 372 | 585 | 2.39e-12 | 67.0 |
MS.gene064047.t1 | MTR_3g025800 | 25.114 | 219 | 129 | 6 | 60 | 258 | 24 | 227 | 4.55e-12 | 65.9 |
MS.gene064047.t1 | MTR_8g066975 | 26.263 | 198 | 130 | 5 | 67 | 256 | 7 | 196 | 3.87e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064047.t1 | AT4G26180 | 63.736 | 273 | 86 | 3 | 6 | 266 | 45 | 316 | 4.76e-122 | 351 |
MS.gene064047.t1 | AT4G26180 | 26.471 | 238 | 142 | 6 | 44 | 268 | 1 | 218 | 4.33e-14 | 71.6 |
MS.gene064047.t1 | AT4G26180 | 62.903 | 248 | 79 | 3 | 6 | 241 | 45 | 291 | 3.66e-108 | 315 |
MS.gene064047.t1 | AT4G26180 | 26.471 | 238 | 142 | 6 | 44 | 268 | 1 | 218 | 2.67e-14 | 71.6 |
MS.gene064047.t1 | AT1G14560 | 53.791 | 277 | 110 | 5 | 6 | 265 | 51 | 326 | 7.99e-96 | 285 |
MS.gene064047.t1 | AT1G14560 | 53.360 | 253 | 100 | 5 | 6 | 241 | 51 | 302 | 5.40e-83 | 251 |
MS.gene064047.t1 | AT1G14560 | 55.895 | 229 | 93 | 4 | 44 | 265 | 1 | 228 | 1.92e-82 | 247 |
MS.gene064047.t1 | AT1G14560 | 28.358 | 134 | 88 | 2 | 26 | 159 | 94 | 219 | 9.37e-11 | 60.8 |
MS.gene064047.t1 | AT4G01100 | 34.100 | 261 | 136 | 6 | 26 | 261 | 47 | 296 | 2.68e-41 | 144 |
MS.gene064047.t1 | AT4G01100 | 25.405 | 185 | 115 | 4 | 84 | 259 | 8 | 178 | 2.83e-14 | 71.6 |
MS.gene064047.t1 | AT4G01100 | 34.100 | 261 | 136 | 6 | 26 | 261 | 97 | 346 | 5.12e-41 | 144 |
MS.gene064047.t1 | AT4G01100 | 25.514 | 243 | 150 | 5 | 26 | 259 | 8 | 228 | 1.93e-17 | 81.3 |
MS.gene064047.t1 | AT4G01100 | 32.727 | 275 | 135 | 7 | 26 | 261 | 97 | 360 | 7.83e-39 | 139 |
MS.gene064047.t1 | AT4G01100 | 24.125 | 257 | 150 | 5 | 26 | 259 | 8 | 242 | 1.87e-15 | 75.5 |
MS.gene064047.t1 | AT2G37890 | 32.787 | 244 | 139 | 5 | 26 | 259 | 104 | 332 | 1.82e-33 | 124 |
MS.gene064047.t1 | AT5G51050 | 30.864 | 243 | 142 | 7 | 26 | 261 | 274 | 497 | 7.30e-33 | 125 |
MS.gene064047.t1 | AT5G51050 | 24.242 | 198 | 127 | 3 | 68 | 260 | 223 | 402 | 1.07e-13 | 70.9 |
MS.gene064047.t1 | AT5G61810 | 30.370 | 270 | 148 | 8 | 5 | 259 | 88 | 332 | 3.41e-31 | 118 |
MS.gene064047.t1 | AT3G55640 | 32.365 | 241 | 138 | 6 | 26 | 256 | 97 | 322 | 4.65e-31 | 118 |
MS.gene064047.t1 | AT3G55640 | 28.155 | 206 | 121 | 7 | 67 | 260 | 37 | 227 | 2.42e-14 | 72.0 |
MS.gene064047.t1 | AT3G55640 | 32.365 | 241 | 138 | 6 | 26 | 256 | 97 | 322 | 4.65e-31 | 118 |
MS.gene064047.t1 | AT3G55640 | 28.155 | 206 | 121 | 7 | 67 | 260 | 37 | 227 | 2.42e-14 | 72.0 |
MS.gene064047.t1 | AT3G53940 | 30.522 | 249 | 147 | 6 | 26 | 263 | 132 | 365 | 5.82e-31 | 118 |
MS.gene064047.t1 | AT3G53940 | 27.805 | 205 | 125 | 6 | 63 | 257 | 68 | 259 | 2.81e-12 | 66.2 |
MS.gene064047.t1 | AT5G61810 | 30.000 | 270 | 149 | 8 | 5 | 259 | 231 | 475 | 2.83e-30 | 118 |
MS.gene064047.t1 | AT4G32400 | 31.933 | 238 | 141 | 4 | 26 | 259 | 165 | 385 | 4.92e-30 | 116 |
MS.gene064047.t1 | AT4G32400 | 26.108 | 203 | 124 | 4 | 68 | 266 | 114 | 294 | 6.63e-14 | 71.2 |
MS.gene064047.t1 | AT5G07320 | 30.213 | 235 | 139 | 4 | 26 | 256 | 260 | 473 | 7.75e-29 | 114 |
MS.gene064047.t1 | AT3G51870 | 28.163 | 245 | 140 | 5 | 26 | 264 | 151 | 365 | 7.77e-27 | 107 |
MS.gene064047.t1 | AT5G01500 | 27.823 | 248 | 139 | 5 | 26 | 265 | 179 | 394 | 2.36e-24 | 101 |
MS.gene064047.t1 | AT5G01500 | 26.846 | 149 | 93 | 3 | 116 | 259 | 160 | 297 | 9.50e-12 | 65.1 |
MS.gene064047.t1 | AT5G56450 | 29.630 | 243 | 145 | 6 | 26 | 259 | 100 | 325 | 3.46e-24 | 99.8 |
MS.gene064047.t1 | AT5G56450 | 22.870 | 223 | 154 | 6 | 56 | 267 | 22 | 237 | 6.30e-11 | 62.4 |
MS.gene064047.t1 | AT3G21390 | 27.106 | 273 | 158 | 5 | 6 | 253 | 68 | 324 | 8.81e-24 | 98.6 |
MS.gene064047.t1 | AT3G21390 | 29.126 | 206 | 133 | 4 | 58 | 256 | 9 | 208 | 3.49e-20 | 88.6 |
MS.gene064047.t1 | AT3G21390 | 27.106 | 273 | 158 | 5 | 6 | 253 | 90 | 346 | 9.01e-24 | 99.0 |
MS.gene064047.t1 | AT3G21390 | 29.126 | 206 | 133 | 4 | 58 | 256 | 31 | 230 | 4.69e-20 | 88.6 |
MS.gene064047.t1 | AT5G48970 | 25.581 | 258 | 155 | 4 | 26 | 259 | 19 | 263 | 3.84e-23 | 95.5 |
MS.gene064047.t1 | AT5G48970 | 28.169 | 142 | 90 | 3 | 125 | 259 | 9 | 145 | 6.71e-11 | 61.6 |
MS.gene064047.t1 | AT5G48970 | 25.483 | 259 | 156 | 4 | 26 | 260 | 90 | 335 | 9.43e-23 | 95.9 |
MS.gene064047.t1 | AT5G48970 | 27.619 | 210 | 139 | 4 | 58 | 259 | 12 | 216 | 4.36e-19 | 85.9 |
MS.gene064047.t1 | AT3G20240 | 25.391 | 256 | 148 | 7 | 27 | 259 | 104 | 339 | 1.07e-21 | 93.2 |
MS.gene064047.t1 | AT5G13490 | 30.672 | 238 | 144 | 7 | 26 | 256 | 149 | 372 | 5.83e-18 | 83.2 |
MS.gene064047.t1 | AT5G13490 | 30.672 | 238 | 144 | 7 | 26 | 256 | 149 | 372 | 5.83e-18 | 83.2 |
MS.gene064047.t1 | AT1G25380 | 28.571 | 182 | 112 | 5 | 80 | 255 | 133 | 302 | 7.78e-18 | 82.4 |
MS.gene064047.t1 | AT1G25380 | 28.571 | 182 | 112 | 5 | 80 | 255 | 133 | 302 | 7.78e-18 | 82.4 |
MS.gene064047.t1 | AT3G53940 | 30.409 | 171 | 94 | 5 | 26 | 186 | 132 | 287 | 2.05e-17 | 80.5 |
MS.gene064047.t1 | AT3G53940 | 27.805 | 205 | 125 | 6 | 63 | 257 | 68 | 259 | 1.64e-12 | 66.6 |
MS.gene064047.t1 | AT3G55640 | 32.164 | 171 | 91 | 6 | 26 | 186 | 97 | 252 | 4.19e-17 | 79.0 |
MS.gene064047.t1 | AT3G55640 | 28.155 | 206 | 121 | 7 | 67 | 260 | 37 | 227 | 7.66e-15 | 72.8 |
MS.gene064047.t1 | AT3G55640 | 32.164 | 171 | 91 | 6 | 26 | 186 | 97 | 252 | 4.19e-17 | 79.0 |
MS.gene064047.t1 | AT3G55640 | 28.155 | 206 | 121 | 7 | 67 | 260 | 37 | 227 | 7.66e-15 | 72.8 |
MS.gene064047.t1 | AT4G28390 | 28.632 | 234 | 153 | 5 | 26 | 256 | 144 | 366 | 7.30e-17 | 79.7 |
MS.gene064047.t1 | AT4G28390 | 28.632 | 234 | 153 | 5 | 26 | 256 | 144 | 366 | 7.30e-17 | 79.7 |
MS.gene064047.t1 | AT3G08580 | 28.632 | 234 | 154 | 5 | 26 | 256 | 145 | 368 | 8.63e-16 | 76.6 |
MS.gene064047.t1 | AT3G08580 | 28.632 | 234 | 154 | 5 | 26 | 256 | 145 | 368 | 8.63e-16 | 76.6 |
MS.gene064047.t1 | AT5G64970 | 26.538 | 260 | 150 | 5 | 26 | 263 | 62 | 302 | 1.30e-15 | 75.5 |
MS.gene064047.t1 | AT5G64970 | 27.308 | 260 | 148 | 6 | 26 | 263 | 186 | 426 | 2.71e-15 | 75.5 |
MS.gene064047.t1 | AT4G11440 | 26.996 | 263 | 163 | 6 | 8 | 263 | 367 | 607 | 1.01e-14 | 74.3 |
MS.gene064047.t1 | AT4G11440 | 26.996 | 263 | 163 | 6 | 8 | 263 | 367 | 607 | 1.01e-14 | 74.3 |
MS.gene064047.t1 | AT5G66380 | 26.442 | 208 | 130 | 7 | 64 | 260 | 106 | 301 | 2.84e-14 | 71.6 |
MS.gene064047.t1 | AT5G17400 | 24.891 | 229 | 151 | 5 | 26 | 247 | 75 | 289 | 4.49e-14 | 71.2 |
MS.gene064047.t1 | AT1G78180 | 26.792 | 265 | 139 | 8 | 26 | 261 | 179 | 417 | 2.31e-13 | 69.7 |
MS.gene064047.t1 | AT2G47490 | 28.249 | 177 | 117 | 4 | 97 | 266 | 136 | 309 | 8.27e-13 | 67.8 |
MS.gene064047.t1 | AT2G47490 | 30.208 | 192 | 118 | 6 | 81 | 268 | 30 | 209 | 2.87e-11 | 63.2 |
MS.gene064047.t1 | AT2G39970 | 24.390 | 205 | 138 | 5 | 67 | 255 | 114 | 317 | 6.01e-12 | 65.1 |
Find 76 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGAAATTCTACTTCTA+TGG | 0.211770 | 6.1:+79458913 | MS.gene064047:CDS |
TCGGACCAAGTTACCTTATC+AGG | 0.278071 | 6.1:+79458558 | MS.gene064047:CDS |
TCCACAGCTCCGACACTCTT+TGG | 0.293511 | 6.1:+79458874 | MS.gene064047:intron |
CCTATCCGCTTGACTTAATT+CGG | 0.322792 | 6.1:+79458539 | MS.gene064047:CDS |
AGGTCCTACCCTTGACCTTA+TGG | 0.344397 | 6.1:+79458480 | MS.gene064047:CDS |
TGCTATAAAACTCAGTTCTT+CGG | 0.352730 | 6.1:-79458244 | None:intergenic |
TGATACTCAGCCCTGAAAAC+AGG | 0.363500 | 6.1:-79459230 | None:intergenic |
TGGCATTAGAGGTCTCTATA+GGG | 0.376779 | 6.1:+79458788 | MS.gene064047:CDS |
CTCACATGTGGATCTGTTGC+CGG | 0.379981 | 6.1:+79458988 | MS.gene064047:CDS |
TACTCTCAGGCATGATTTCA+TGG | 0.385122 | 6.1:-79459395 | None:intergenic |
GTGGCATTAGAGGTCTCTAT+AGG | 0.387290 | 6.1:+79458787 | MS.gene064047:CDS |
AAAATTATTTGCAGGGGAAA+TGG | 0.389338 | 6.1:+79458358 | MS.gene064047:intron |
CATATCCTCTTGAAGTTGTC+AGG | 0.390609 | 6.1:+79459031 | MS.gene064047:CDS |
TATAAAGAGGGTGGCATTAG+AGG | 0.393834 | 6.1:+79458777 | MS.gene064047:CDS |
CCCTTTCAATTCAGTTTCCT+CGG | 0.394542 | 6.1:-79459160 | None:intergenic |
GTAGGACCTTTCCAAACATT+AGG | 0.400870 | 6.1:-79458466 | None:intergenic |
CTGGATCAGTTAGGAGAATC+AGG | 0.401115 | 6.1:+79458276 | MS.gene064047:CDS |
GCTATAAAACTCAGTTCTTC+GGG | 0.409137 | 6.1:-79458243 | None:intergenic |
CCAACCAAGTTGAATGTGTT+GGG | 0.415930 | 6.1:+79458699 | MS.gene064047:CDS |
GGATCTGTTGCCGGTTTACT+TGG | 0.423820 | 6.1:+79458997 | MS.gene064047:CDS |
TCTTGTAATCCTCGGGTACA+TGG | 0.424056 | 6.1:-79458948 | None:intergenic |
CAATCTTCGGTATTCCTCAT+AGG | 0.426870 | 6.1:-79458428 | None:intergenic |
GTTGTTCCATCTGCGGCCAT+TGG | 0.439759 | 6.1:+79459355 | MS.gene064047:CDS |
CCCAACACATTCAACTTGGT+TGG | 0.451472 | 6.1:-79458699 | None:intergenic |
GTTTGAAATTCTACTTCTAT+GGG | 0.452685 | 6.1:+79458914 | MS.gene064047:CDS |
TAGAATTTCAAACCCGCGTA+TGG | 0.453141 | 6.1:-79458904 | None:intergenic |
GCTGAGTATCAACTACATAA+AGG | 0.462740 | 6.1:+79459242 | MS.gene064047:CDS |
CATCCCCAACACATTCAACT+TGG | 0.474348 | 6.1:-79458703 | None:intergenic |
CTTATGGCAGGGTCACTCTC+AGG | 0.483660 | 6.1:+79458496 | MS.gene064047:CDS |
TCCAACCAAGTTGAATGTGT+TGG | 0.496391 | 6.1:+79458698 | MS.gene064047:CDS |
CCTACCCTTGACCTTATGGC+AGG | 0.496875 | 6.1:+79458484 | MS.gene064047:CDS |
CTGAGAGTGACCCTGCCATA+AGG | 0.497964 | 6.1:-79458495 | None:intergenic |
TGATTGCTCAAAAGCAAGGC+TGG | 0.499574 | 6.1:+79459202 | MS.gene064047:CDS |
GCAAGGATTATTCCTTATGC+AGG | 0.499813 | 6.1:+79458391 | MS.gene064047:CDS |
GAAGGTCTGACCAAGTAAAC+CGG | 0.510739 | 6.1:-79459007 | None:intergenic |
CCGAATTAAGTCAAGCGGAT+AGG | 0.520778 | 6.1:-79458539 | None:intergenic |
CAGGACTGTCTGGATCAGTT+AGG | 0.521755 | 6.1:+79458267 | MS.gene064047:CDS |
AAGCTTGCACGATCAATCTT+CGG | 0.527031 | 6.1:-79458441 | None:intergenic |
ATATACTGAAGACCTGCATA+AGG | 0.527451 | 6.1:-79458403 | None:intergenic |
GTGAAGCCAATGGCCGCAGA+TGG | 0.532601 | 6.1:-79459361 | None:intergenic |
CCGAGGAAACTGAATTGAAA+GGG | 0.537080 | 6.1:+79459160 | MS.gene064047:CDS |
AGAGGTCTCTATAGGGGAGT+AGG | 0.544211 | 6.1:+79458795 | MS.gene064047:CDS |
TCCGAGGAAACTGAATTGAA+AGG | 0.551267 | 6.1:+79459159 | MS.gene064047:CDS |
AATCAAAACCATGGATCTCA+TGG | 0.555093 | 6.1:-79459184 | None:intergenic |
AGAATTTCAAACCCGCGTAT+GGG | 0.562448 | 6.1:-79458903 | None:intergenic |
TCTTCAGTATATGTCCTATG+AGG | 0.563613 | 6.1:+79458414 | MS.gene064047:CDS |
AGTTGTCAGGAGGCAAATGC+AGG | 0.565986 | 6.1:+79459044 | MS.gene064047:CDS |
AATTCAGGTTGTTCCATCTG+CGG | 0.571625 | 6.1:+79459348 | MS.gene064047:intron |
CAGGGGAAATGGAGCAAGTG+TGG | 0.576065 | 6.1:+79458369 | MS.gene064047:intron |
TGCCTCCTGACAACTTCAAG+AGG | 0.577185 | 6.1:-79459036 | None:intergenic |
GTGACCCTGCCATAAGGTCA+AGG | 0.580517 | 6.1:-79458489 | None:intergenic |
ATAATGAACAAGTTTATCGA+GGG | 0.581693 | 6.1:+79458730 | MS.gene064047:CDS |
GAAAGGGACCATGAGATCCA+TGG | 0.582691 | 6.1:+79459176 | MS.gene064047:CDS |
CTTTGGAATATTCCCATACG+CGG | 0.582745 | 6.1:+79458891 | MS.gene064047:CDS |
CTACCCTTGACCTTATGGCA+GGG | 0.587881 | 6.1:+79458485 | MS.gene064047:CDS |
TTTCTTTGGCCACATGACTG+TGG | 0.594201 | 6.1:+79457331 | None:intergenic |
GATACTCAGCCCTGAAAACA+GGG | 0.597661 | 6.1:-79459229 | None:intergenic |
GGCATTAGAGGTCTCTATAG+GGG | 0.605826 | 6.1:+79458789 | MS.gene064047:CDS |
AATAATGAACAAGTTTATCG+AGG | 0.610108 | 6.1:+79458729 | MS.gene064047:CDS |
GGGAATATTCCAAAGAGTGT+CGG | 0.616862 | 6.1:-79458883 | None:intergenic |
ATGGCAGGGTCACTCTCAGG+AGG | 0.619651 | 6.1:+79458499 | MS.gene064047:CDS |
TTTGAAATTCTACTTCTATG+GGG | 0.621949 | 6.1:+79458915 | MS.gene064047:CDS |
GAAATGGAGCAAGTGTGGCA+AGG | 0.627350 | 6.1:+79458374 | MS.gene064047:CDS |
ATCATAAACTGTGAAGCCAA+TGG | 0.627582 | 6.1:-79459371 | None:intergenic |
TGACCCTGCCATAAGGTCAA+GGG | 0.628759 | 6.1:-79458488 | None:intergenic |
GGATTACAAGAAAAGCATCA+TGG | 0.633750 | 6.1:+79458960 | MS.gene064047:CDS |
TTGGTCCGAATTAAGTCAAG+CGG | 0.635861 | 6.1:-79458544 | None:intergenic |
TTTGGAATATTCCCATACGC+GGG | 0.647148 | 6.1:+79458892 | MS.gene064047:CDS |
AACTTCAAGAGGATATGTGA+AGG | 0.648843 | 6.1:-79459025 | None:intergenic |
CAAGTTGAATGTGTTGGGGA+TGG | 0.648984 | 6.1:+79458704 | MS.gene064047:CDS |
AATGAAGCGCCATGTACCCG+AGG | 0.665599 | 6.1:+79458939 | MS.gene064047:CDS |
TGGCAGGGTCACTCTCAGGA+GGG | 0.675992 | 6.1:+79458500 | MS.gene064047:CDS |
CAACCAAGTTGAATGTGTTG+GGG | 0.677476 | 6.1:+79458700 | MS.gene064047:CDS |
ATCCTCTTGAAGTTGTCAGG+AGG | 0.680873 | 6.1:+79459034 | MS.gene064047:CDS |
CCTGCCATAAGGTCAAGGGT+AGG | 0.694528 | 6.1:-79458484 | None:intergenic |
ATCATGGCGAAACTCACATG+TGG | 0.699503 | 6.1:+79458976 | MS.gene064047:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTGAGAAAATAATTTAAT+TGG | + | chr6.1:79457843-79457862 | MS.gene064047:intron | 10.0% |
!! | AATTGAGAATGATAATTATA+AGG | - | chr6.1:79457998-79458017 | None:intergenic | 15.0% |
!! | ATTGAGAATGATAATTATAA+GGG | - | chr6.1:79457997-79458016 | None:intergenic | 15.0% |
!!! | AAAATATATTTTACCTGATA+AGG | - | chr6.1:79458574-79458593 | None:intergenic | 15.0% |
!! | CTTTCAAAAACTTATAAAGA+GGG | + | chr6.1:79458765-79458784 | MS.gene064047:CDS | 20.0% |
!! | TCTTTCAAAAACTTATAAAG+AGG | + | chr6.1:79458764-79458783 | MS.gene064047:CDS | 20.0% |
!!! | AAAAAAGCATAAGAAAAAAG+AGG | - | chr6.1:79458049-79458068 | None:intergenic | 20.0% |
!!! | AAAAAGCATAAGAAAAAAGA+GGG | - | chr6.1:79458048-79458067 | None:intergenic | 20.0% |
!!! | TCATTTTTTCAACTTATTAC+TGG | - | chr6.1:79457728-79457747 | None:intergenic | 20.0% |
!!! | TTATTTTCTCAAATACTCAT+CGG | - | chr6.1:79457837-79457856 | None:intergenic | 20.0% |
!!! | TTCTTTTTTTTTTGCAATTC+AGG | + | chr6.1:79459333-79459352 | MS.gene064047:intron | 20.0% |
! | AAATGCTTAGTTATACAGAA+CGG | - | chr6.1:79459310-79459329 | None:intergenic | 25.0% |
! | AATAATGAACAAGTTTATCG+AGG | + | chr6.1:79458729-79458748 | MS.gene064047:CDS | 25.0% |
! | ATAATGAACAAGTTTATCGA+GGG | + | chr6.1:79458730-79458749 | MS.gene064047:CDS | 25.0% |
! | ATCAGGTAGATAAAAATCAT+AGG | + | chr6.1:79458293-79458312 | MS.gene064047:intron | 25.0% |
! | ATTAAAGTAATTCACACTCT+AGG | + | chr6.1:79459283-79459302 | MS.gene064047:intron | 25.0% |
! | GATACAAAGTTAATCTAACT+AGG | + | chr6.1:79459119-79459138 | MS.gene064047:intron | 25.0% |
!! | GTTTGAAATTCTACTTCTAT+GGG | + | chr6.1:79458914-79458933 | MS.gene064047:CDS | 25.0% |
!! | TGTTATGGTAATGAATAGTT+TGG | + | chr6.1:79457406-79457425 | MS.gene064047:intron | 25.0% |
!! | TTTGAAATTCTACTTCTATG+GGG | + | chr6.1:79458915-79458934 | MS.gene064047:CDS | 25.0% |
AAAATTATTTGCAGGGGAAA+TGG | + | chr6.1:79458358-79458377 | MS.gene064047:intron | 30.0% | |
AAATTTCATGTCTGTGTTTC+TGG | - | chr6.1:79458138-79458157 | None:intergenic | 30.0% | |
AACCATTACTGTTACATAAG+AGG | + | chr6.1:79457529-79457548 | MS.gene064047:intron | 30.0% | |
AATTGTGCATTTCACTGTTA+TGG | + | chr6.1:79457379-79457398 | MS.gene064047:intron | 30.0% | |
ACCAATGCAAAATTATTTGC+AGG | + | chr6.1:79458350-79458369 | MS.gene064047:intron | 30.0% | |
ACCATTACTGTTACATAAGA+GGG | + | chr6.1:79457530-79457549 | MS.gene064047:intron | 30.0% | |
CAATGCAAAATTATTTGCAG+GGG | + | chr6.1:79458352-79458371 | MS.gene064047:intron | 30.0% | |
CACTGTTATGGATATTGTTA+TGG | + | chr6.1:79457391-79457410 | MS.gene064047:intron | 30.0% | |
CATTTAAATCTGCTTGTGTT+TGG | + | chr6.1:79458822-79458841 | MS.gene064047:intron | 30.0% | |
CCAATGCAAAATTATTTGCA+GGG | + | chr6.1:79458351-79458370 | MS.gene064047:intron | 30.0% | |
CTTATGTAACAGTAATGGTT+AGG | - | chr6.1:79457529-79457548 | None:intergenic | 30.0% | |
GGTAGATAAAAATCATAGGT+AGG | + | chr6.1:79458297-79458316 | MS.gene064047:intron | 30.0% | |
TAGTTACAGTTACAGACATA+AGG | + | chr6.1:79457616-79457635 | MS.gene064047:intron | 30.0% | |
TCAAAAACTTATAAAGAGGG+TGG | + | chr6.1:79458768-79458787 | MS.gene064047:CDS | 30.0% | |
TGCTATAAAACTCAGTTCTT+CGG | - | chr6.1:79458247-79458266 | None:intergenic | 30.0% | |
! | ACTAACTTACTAACTGATTC+AGG | - | chr6.1:79457600-79457619 | None:intergenic | 30.0% |
! | GGTTTGAAATTCTACTTCTA+TGG | + | chr6.1:79458913-79458932 | MS.gene064047:CDS | 30.0% |
! | TAGTCTACTTCATCTTTTGA+TGG | - | chr6.1:79459421-79459440 | None:intergenic | 30.0% |
! | TTTTACCTGATAAGGTAACT+TGG | - | chr6.1:79458566-79458585 | None:intergenic | 30.0% |
!! | AAGTTTTTGAAAGACAGTCA+TGG | - | chr6.1:79458758-79458777 | None:intergenic | 30.0% |
AACAGTAATGGTTAGGACTT+AGG | - | chr6.1:79457522-79457541 | None:intergenic | 35.0% | |
AACTTCAAGAGGATATGTGA+AGG | - | chr6.1:79459028-79459047 | None:intergenic | 35.0% | |
AATCAAAACCATGGATCTCA+TGG | - | chr6.1:79459187-79459206 | None:intergenic | 35.0% | |
ATATACTGAAGACCTGCATA+AGG | - | chr6.1:79458406-79458425 | None:intergenic | 35.0% | |
ATCATAAACTGTGAAGCCAA+TGG | - | chr6.1:79459374-79459393 | None:intergenic | 35.0% | |
CCATTACTGTTACATAAGAG+GGG | + | chr6.1:79457531-79457550 | MS.gene064047:intron | 35.0% | |
GATTGTGATCAATCGATCTA+TGG | - | chr6.1:79458211-79458230 | None:intergenic | 35.0% | |
GCAAAATACAACCAAAGTCA+TGG | - | chr6.1:79458623-79458642 | None:intergenic | 35.0% | |
GCTATAAAACTCAGTTCTTC+GGG | - | chr6.1:79458246-79458265 | None:intergenic | 35.0% | |
GCTGAGTATCAACTACATAA+AGG | + | chr6.1:79459242-79459261 | MS.gene064047:CDS | 35.0% | |
TAACTAGGTTCAAAAACTCG+TGG | + | chr6.1:79459134-79459153 | MS.gene064047:intron | 35.0% | |
TCAATCGATCTATGGTCAAT+TGG | - | chr6.1:79458203-79458222 | None:intergenic | 35.0% | |
TCAATTGTCATCCATGACTT+TGG | + | chr6.1:79458609-79458628 | MS.gene064047:intron | 35.0% | |
TCTTCAGTATATGTCCTATG+AGG | + | chr6.1:79458414-79458433 | MS.gene064047:CDS | 35.0% | |
TGAACCATTGACACTATACA+CGG | + | chr6.1:79457687-79457706 | MS.gene064047:intron | 35.0% | |
! | ATGCTTTTCTTGTAATCCTC+GGG | - | chr6.1:79458958-79458977 | None:intergenic | 35.0% |
! | CCCTGCAAATAATTTTGCAT+TGG | - | chr6.1:79458354-79458373 | None:intergenic | 35.0% |
! | CTTTTGAGCAATCAAAACCA+TGG | - | chr6.1:79459196-79459215 | None:intergenic | 35.0% |
! | GATGCTTTTCTTGTAATCCT+CGG | - | chr6.1:79458959-79458978 | None:intergenic | 35.0% |
! | GCTTTTCCTAATGTTTGGAA+AGG | + | chr6.1:79458460-79458479 | MS.gene064047:CDS | 35.0% |
! | TGCAAGCTTTTCCTAATGTT+TGG | + | chr6.1:79458455-79458474 | MS.gene064047:CDS | 35.0% |
!! | AGAACTGAGTTTTATAGCAC+AGG | + | chr6.1:79458248-79458267 | MS.gene064047:CDS | 35.0% |
!! | GGATTACAAGAAAAGCATCA+TGG | + | chr6.1:79458960-79458979 | MS.gene064047:CDS | 35.0% |
!! | TGCAGGTAGTTTGCTTTATT+TGG | + | chr6.1:79459061-79459080 | MS.gene064047:intron | 35.0% |
!! | TTACAGACATAAGGTATCGT+AGG | + | chr6.1:79457625-79457644 | MS.gene064047:intron | 35.0% |
!!! | GTTTTGATTGCTCAAAAGCA+AGG | + | chr6.1:79459198-79459217 | MS.gene064047:CDS | 35.0% |
AAGCTTGCACGATCAATCTT+CGG | - | chr6.1:79458444-79458463 | None:intergenic | 40.0% | |
AGAATTTCAAACCCGCGTAT+GGG | - | chr6.1:79458906-79458925 | None:intergenic | 40.0% | |
CAATCTTCGGTATTCCTCAT+AGG | - | chr6.1:79458431-79458450 | None:intergenic | 40.0% | |
CATATCCTCTTGAAGTTGTC+AGG | + | chr6.1:79459031-79459050 | MS.gene064047:CDS | 40.0% | |
CCCCTCTTATGTAACAGTAA+TGG | - | chr6.1:79457534-79457553 | None:intergenic | 40.0% | |
CCCTTTCAATTCAGTTTCCT+CGG | - | chr6.1:79459163-79459182 | None:intergenic | 40.0% | |
CCGAGGAAACTGAATTGAAA+GGG | + | chr6.1:79459160-79459179 | MS.gene064047:CDS | 40.0% | |
CCTATCCGCTTGACTTAATT+CGG | + | chr6.1:79458539-79458558 | MS.gene064047:CDS | 40.0% | |
CGTTGCGTGTAATTAGTGAA+TGG | + | chr6.1:79458158-79458177 | MS.gene064047:intron | 40.0% | |
GAACCATTGACACTATACAC+GGG | + | chr6.1:79457688-79457707 | MS.gene064047:intron | 40.0% | |
GCAAGGATTATTCCTTATGC+AGG | + | chr6.1:79458391-79458410 | MS.gene064047:CDS | 40.0% | |
GGTCGTCTGGAAATTATAGA+TGG | + | chr6.1:79459082-79459101 | MS.gene064047:intron | 40.0% | |
GTAGGACCTTTCCAAACATT+AGG | - | chr6.1:79458469-79458488 | None:intergenic | 40.0% | |
GTCGGATATCTGAACCATAT+CGG | + | chr6.1:79457896-79457915 | MS.gene064047:intron | 40.0% | |
TACTCTCAGGCATGATTTCA+TGG | - | chr6.1:79459398-79459417 | None:intergenic | 40.0% | |
TAGAATTTCAAACCCGCGTA+TGG | - | chr6.1:79458907-79458926 | None:intergenic | 40.0% | |
TATAAAGAGGGTGGCATTAG+AGG | + | chr6.1:79458777-79458796 | MS.gene064047:CDS | 40.0% | |
TCCGAGGAAACTGAATTGAA+AGG | + | chr6.1:79459159-79459178 | MS.gene064047:CDS | 40.0% | |
TGGCATTAGAGGTCTCTATA+GGG | + | chr6.1:79458788-79458807 | MS.gene064047:CDS | 40.0% | |
TTGGTCCGAATTAAGTCAAG+CGG | - | chr6.1:79458547-79458566 | None:intergenic | 40.0% | |
! | CAACCAAGTTGAATGTGTTG+GGG | + | chr6.1:79458700-79458719 | MS.gene064047:CDS | 40.0% |
! | CCAACCAAGTTGAATGTGTT+GGG | + | chr6.1:79458699-79458718 | MS.gene064047:CDS | 40.0% |
! | GGGAATATTCCAAAGAGTGT+CGG | - | chr6.1:79458886-79458905 | None:intergenic | 40.0% |
! | TCCAACCAAGTTGAATGTGT+TGG | + | chr6.1:79458698-79458717 | MS.gene064047:CDS | 40.0% |
! | TTTGGAATATTCCCATACGC+GGG | + | chr6.1:79458892-79458911 | MS.gene064047:CDS | 40.0% |
! | TTTTATAGCACAGGACTGTC+TGG | + | chr6.1:79458257-79458276 | MS.gene064047:CDS | 40.0% |
!! | AATTCAGGTTGTTCCATCTG+CGG | + | chr6.1:79459348-79459367 | MS.gene064047:intron | 40.0% |
!! | CATCTTTTGATGGTACTCTC+AGG | - | chr6.1:79459411-79459430 | None:intergenic | 40.0% |
!! | CTTATTACTGGTGTCGACTT+TGG | - | chr6.1:79457716-79457735 | None:intergenic | 40.0% |
!! | CTTTGGAATATTCCCATACG+CGG | + | chr6.1:79458891-79458910 | MS.gene064047:CDS | 40.0% |
!! | GTTTGCTTTATTTGGTCGTC+TGG | + | chr6.1:79459069-79459088 | MS.gene064047:intron | 40.0% |
ATCATGGCGAAACTCACATG+TGG | + | chr6.1:79458976-79458995 | MS.gene064047:CDS | 45.0% | |
ATCCTCTTGAAGTTGTCAGG+AGG | + | chr6.1:79459034-79459053 | MS.gene064047:CDS | 45.0% | |
CATCCCCAACACATTCAACT+TGG | - | chr6.1:79458706-79458725 | None:intergenic | 45.0% | |
CCCAACACATTCAACTTGGT+TGG | - | chr6.1:79458702-79458721 | None:intergenic | 45.0% | |
CCGAATTAAGTCAAGCGGAT+AGG | - | chr6.1:79458542-79458561 | None:intergenic | 45.0% | |
CTGGATCAGTTAGGAGAATC+AGG | + | chr6.1:79458276-79458295 | MS.gene064047:CDS | 45.0% | |
GAAGGTCTGACCAAGTAAAC+CGG | - | chr6.1:79459010-79459029 | None:intergenic | 45.0% | |
GATACTCAGCCCTGAAAACA+GGG | - | chr6.1:79459232-79459251 | None:intergenic | 45.0% | |
GGCATTAGAGGTCTCTATAG+GGG | + | chr6.1:79458789-79458808 | MS.gene064047:CDS | 45.0% | |
GTGGATGCTTTACGTGTAAG+TGG | + | chr6.1:79457350-79457369 | MS.gene064047:intron | 45.0% | |
GTGGCATTAGAGGTCTCTAT+AGG | + | chr6.1:79458787-79458806 | MS.gene064047:CDS | 45.0% | |
TCGGACCAAGTTACCTTATC+AGG | + | chr6.1:79458558-79458577 | MS.gene064047:CDS | 45.0% | |
TCTTGTAATCCTCGGGTACA+TGG | - | chr6.1:79458951-79458970 | None:intergenic | 45.0% | |
TGATACTCAGCCCTGAAAAC+AGG | - | chr6.1:79459233-79459252 | None:intergenic | 45.0% | |
TGATTGCTCAAAAGCAAGGC+TGG | + | chr6.1:79459202-79459221 | MS.gene064047:CDS | 45.0% | |
TGTGGAAGACGTATCCGATA+TGG | - | chr6.1:79457913-79457932 | None:intergenic | 45.0% | |
TTGGTTGGACTAACAACCTG+CGG | - | chr6.1:79458687-79458706 | None:intergenic | 45.0% | |
! | ACGTCTTCCACAAGAAGTGT+CGG | + | chr6.1:79457921-79457940 | MS.gene064047:intron | 45.0% |
! | ATGTGATGTCGTGTCGTTGT+CGG | + | chr6.1:79457878-79457897 | MS.gene064047:intron | 45.0% |
! | CAAGTTGAATGTGTTGGGGA+TGG | + | chr6.1:79458704-79458723 | MS.gene064047:CDS | 45.0% |
! | GCGTTTGAAATTGAAACCGC+AGG | + | chr6.1:79458668-79458687 | MS.gene064047:intron | 45.0% |
AGAGGTCTCTATAGGGGAGT+AGG | + | chr6.1:79458795-79458814 | MS.gene064047:CDS | 50.0% | |
AGGTCCTACCCTTGACCTTA+TGG | + | chr6.1:79458480-79458499 | MS.gene064047:CDS | 50.0% | |
AGTTGTCAGGAGGCAAATGC+AGG | + | chr6.1:79459044-79459063 | MS.gene064047:CDS | 50.0% | |
CAGGACTGTCTGGATCAGTT+AGG | + | chr6.1:79458267-79458286 | MS.gene064047:CDS | 50.0% | |
CTACCCTTGACCTTATGGCA+GGG | + | chr6.1:79458485-79458504 | MS.gene064047:CDS | 50.0% | |
CTCACATGTGGATCTGTTGC+CGG | + | chr6.1:79458988-79459007 | MS.gene064047:CDS | 50.0% | |
GAAAGGGACCATGAGATCCA+TGG | + | chr6.1:79459176-79459195 | MS.gene064047:CDS | 50.0% | |
GAAATGGAGCAAGTGTGGCA+AGG | + | chr6.1:79458374-79458393 | MS.gene064047:CDS | 50.0% | |
GTGCCCGTGTATAGTGTCAA+TGG | - | chr6.1:79457694-79457713 | None:intergenic | 50.0% | |
GTGTAAGATTGCGCGAGTGT+GGG | + | chr6.1:79458102-79458121 | MS.gene064047:intron | 50.0% | |
TCAAAAACTCGTGGCATCCG+AGG | + | chr6.1:79459143-79459162 | MS.gene064047:CDS | 50.0% | |
TGACCCTGCCATAAGGTCAA+GGG | - | chr6.1:79458491-79458510 | None:intergenic | 50.0% | |
TGCCTCCTGACAACTTCAAG+AGG | - | chr6.1:79459039-79459058 | None:intergenic | 50.0% | |
TGTAAGATTGCGCGAGTGTG+GGG | + | chr6.1:79458103-79458122 | MS.gene064047:intron | 50.0% | |
TGTGTAAGATTGCGCGAGTG+TGG | + | chr6.1:79458101-79458120 | MS.gene064047:intron | 50.0% | |
! | GCTGGAAGACCCTGTTTTCA+GGG | + | chr6.1:79459220-79459239 | MS.gene064047:CDS | 50.0% |
!! | GGATCTGTTGCCGGTTTACT+TGG | + | chr6.1:79458997-79459016 | MS.gene064047:CDS | 50.0% |
!! | TGTAGCACCGACACTTCTTG+TGG | - | chr6.1:79457931-79457950 | None:intergenic | 50.0% |
CAGGGGAAATGGAGCAAGTG+TGG | + | chr6.1:79458369-79458388 | MS.gene064047:intron | 55.0% | |
CCTACCCTTGACCTTATGGC+AGG | + | chr6.1:79458484-79458503 | MS.gene064047:CDS | 55.0% | |
CCTGCCATAAGGTCAAGGGT+AGG | - | chr6.1:79458487-79458506 | None:intergenic | 55.0% | |
CTGAGAGTGACCCTGCCATA+AGG | - | chr6.1:79458498-79458517 | None:intergenic | 55.0% | |
CTTATGGCAGGGTCACTCTC+AGG | + | chr6.1:79458496-79458515 | MS.gene064047:CDS | 55.0% | |
GTGACCCTGCCATAAGGTCA+AGG | - | chr6.1:79458492-79458511 | None:intergenic | 55.0% | |
GTTGTTCCATCTGCGGCCAT+TGG | + | chr6.1:79459355-79459374 | MS.gene064047:CDS | 55.0% | |
TCCACAGCTCCGACACTCTT+TGG | + | chr6.1:79458874-79458893 | MS.gene064047:intron | 55.0% | |
! | AATGAAGCGCCATGTACCCG+AGG | + | chr6.1:79458939-79458958 | MS.gene064047:CDS | 55.0% |
! | GGCTGGAAGACCCTGTTTTC+AGG | + | chr6.1:79459219-79459238 | MS.gene064047:CDS | 55.0% |
!! | TCCAAAGAGTGTCGGAGCTG+TGG | - | chr6.1:79458878-79458897 | None:intergenic | 55.0% |
ATGGCAGGGTCACTCTCAGG+AGG | + | chr6.1:79458499-79458518 | MS.gene064047:CDS | 60.0% | |
GCGCGAGTGTGGGGAGATAA+TGG | + | chr6.1:79458112-79458131 | MS.gene064047:intron | 60.0% | |
GTGAAGCCAATGGCCGCAGA+TGG | - | chr6.1:79459364-79459383 | None:intergenic | 60.0% | |
TGGCAGGGTCACTCTCAGGA+GGG | + | chr6.1:79458500-79458519 | MS.gene064047:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 79457344 | 79459441 | 79457344 | ID=MS.gene064047 |
chr6.1 | mRNA | 79457344 | 79459441 | 79457344 | ID=MS.gene064047.t1;Parent=MS.gene064047 |
chr6.1 | exon | 79457344 | 79457364 | 79457344 | ID=MS.gene064047.t1.exon1;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79457344 | 79457364 | 79457344 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79458242 | 79458297 | 79458242 | ID=MS.gene064047.t1.exon2;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79458242 | 79458297 | 79458242 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79458372 | 79458579 | 79458372 | ID=MS.gene064047.t1.exon3;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79458372 | 79458579 | 79458372 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79458690 | 79458816 | 79458690 | ID=MS.gene064047.t1.exon4;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79458690 | 79458816 | 79458690 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79458881 | 79459065 | 79458881 | ID=MS.gene064047.t1.exon5;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79458881 | 79459065 | 79458881 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79459141 | 79459263 | 79459141 | ID=MS.gene064047.t1.exon6;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79459141 | 79459263 | 79459141 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
chr6.1 | exon | 79459355 | 79459441 | 79459355 | ID=MS.gene064047.t1.exon7;Parent=MS.gene064047.t1 |
chr6.1 | CDS | 79459355 | 79459441 | 79459355 | ID=cds.MS.gene064047.t1;Parent=MS.gene064047.t1 |
Gene Sequence |
Protein sequence |