Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074631.t1 | XP_003620883.1 | 96.3 | 322 | 5 | 1 | 1 | 322 | 1 | 315 | 1.10E-169 | 605.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074631.t1 | F4JU70 | 68.3 | 312 | 98 | 1 | 10 | 320 | 5 | 316 | 2.9e-123 | 443.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074631.t1 | G7KJ83 | 96.3 | 322 | 5 | 1 | 1 | 322 | 1 | 315 | 7.8e-170 | 605.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074631.t1 | MTR_6g091800 | 96.273 | 322 | 5 | 1 | 1 | 322 | 1 | 315 | 0.0 | 626 |
MS.gene074631.t1 | MTR_6g091800 | 89.595 | 346 | 5 | 2 | 1 | 322 | 1 | 339 | 0.0 | 614 |
MS.gene074631.t1 | MTR_6g091800 | 88.715 | 319 | 5 | 2 | 1 | 295 | 1 | 312 | 0.0 | 558 |
MS.gene074631.t1 | MTR_6g034145 | 98.084 | 261 | 5 | 0 | 62 | 322 | 1 | 261 | 0.0 | 528 |
MS.gene074631.t1 | MTR_6g034145 | 25.854 | 205 | 127 | 4 | 25 | 216 | 60 | 252 | 2.89e-12 | 66.2 |
MS.gene074631.t1 | MTR_6g091800 | 83.851 | 322 | 4 | 2 | 1 | 322 | 1 | 274 | 0.0 | 525 |
MS.gene074631.t1 | MTR_6g091800 | 78.035 | 346 | 4 | 3 | 1 | 322 | 1 | 298 | 0.0 | 513 |
MS.gene074631.t1 | MTR_6g092210 | 91.571 | 261 | 16 | 1 | 62 | 322 | 1 | 255 | 1.14e-176 | 489 |
MS.gene074631.t1 | MTR_6g092210 | 26.633 | 199 | 127 | 4 | 25 | 216 | 60 | 246 | 8.50e-13 | 67.8 |
MS.gene074631.t1 | MTR_6g091800 | 95.669 | 254 | 4 | 1 | 1 | 254 | 1 | 247 | 1.82e-176 | 489 |
MS.gene074631.t1 | MTR_6g091800 | 27.885 | 208 | 123 | 5 | 121 | 316 | 18 | 210 | 4.70e-14 | 71.6 |
MS.gene074631.t1 | MTR_6g091800 | 87.410 | 278 | 4 | 2 | 1 | 254 | 1 | 271 | 2.37e-171 | 477 |
MS.gene074631.t1 | MTR_6g091800 | 25.431 | 232 | 122 | 7 | 121 | 316 | 18 | 234 | 7.24e-11 | 62.4 |
MS.gene074631.t1 | MTR_6g091910 | 88.119 | 202 | 22 | 1 | 121 | 322 | 18 | 217 | 3.62e-128 | 365 |
MS.gene074631.t1 | MTR_6g091910 | 36.842 | 228 | 112 | 5 | 1 | 216 | 1 | 208 | 5.63e-33 | 121 |
MS.gene074631.t1 | MTR_6g091800 | 94.764 | 191 | 3 | 1 | 1 | 191 | 1 | 184 | 5.42e-127 | 360 |
MS.gene074631.t1 | MTR_3g104600 | 54.037 | 322 | 141 | 3 | 6 | 320 | 15 | 336 | 1.18e-123 | 358 |
MS.gene074631.t1 | MTR_6g091800 | 84.186 | 215 | 3 | 2 | 1 | 191 | 1 | 208 | 5.74e-122 | 349 |
MS.gene074631.t1 | MTR_5g009500 | 37.267 | 322 | 165 | 7 | 22 | 318 | 34 | 343 | 8.23e-61 | 197 |
MS.gene074631.t1 | MTR_8g027975 | 34.259 | 324 | 174 | 6 | 22 | 318 | 47 | 358 | 1.83e-56 | 187 |
MS.gene074631.t1 | MTR_7g064980 | 35.179 | 307 | 167 | 6 | 24 | 313 | 23 | 314 | 3.64e-51 | 172 |
MS.gene074631.t1 | MTR_3g098460 | 33.446 | 296 | 175 | 6 | 23 | 313 | 202 | 480 | 3.13e-48 | 168 |
MS.gene074631.t1 | MTR_7g084400 | 34.797 | 296 | 162 | 7 | 26 | 313 | 213 | 485 | 1.46e-46 | 164 |
MS.gene074631.t1 | MTR_8g096050 | 33.108 | 296 | 176 | 6 | 23 | 313 | 224 | 502 | 1.18e-45 | 162 |
MS.gene074631.t1 | MTR_8g096050 | 33.668 | 199 | 119 | 4 | 23 | 219 | 318 | 505 | 5.77e-26 | 108 |
MS.gene074631.t1 | MTR_5g081150 | 33.663 | 303 | 173 | 5 | 25 | 313 | 33 | 321 | 3.06e-43 | 151 |
MS.gene074631.t1 | MTR_5g081150 | 28.509 | 228 | 138 | 7 | 104 | 320 | 16 | 229 | 2.95e-13 | 69.7 |
MS.gene074631.t1 | MTR_5g081150 | 31.472 | 197 | 119 | 5 | 25 | 218 | 140 | 323 | 3.24e-12 | 66.6 |
MS.gene074631.t1 | MTR_1g012030 | 31.864 | 295 | 175 | 6 | 24 | 313 | 137 | 410 | 2.46e-41 | 149 |
MS.gene074631.t1 | MTR_1g012030 | 30.102 | 196 | 123 | 3 | 19 | 214 | 227 | 408 | 3.65e-21 | 93.6 |
MS.gene074631.t1 | MTR_1g012030 | 26.887 | 212 | 127 | 6 | 116 | 321 | 132 | 321 | 2.01e-13 | 70.9 |
MS.gene074631.t1 | MTR_3g107510 | 30.169 | 295 | 180 | 6 | 24 | 313 | 120 | 393 | 2.03e-39 | 143 |
MS.gene074631.t1 | MTR_3g107510 | 25.854 | 205 | 125 | 6 | 122 | 321 | 122 | 304 | 7.95e-13 | 68.9 |
MS.gene074631.t1 | MTR_3g104500 | 29.582 | 311 | 185 | 9 | 22 | 315 | 30 | 323 | 4.22e-38 | 138 |
MS.gene074631.t1 | MTR_3g104500 | 25.121 | 207 | 143 | 5 | 121 | 321 | 33 | 233 | 7.49e-15 | 74.3 |
MS.gene074631.t1 | MTR_7g068340 | 30.175 | 285 | 159 | 5 | 37 | 310 | 98 | 353 | 1.04e-36 | 135 |
MS.gene074631.t1 | MTR_4g114320 | 27.946 | 297 | 184 | 6 | 24 | 313 | 121 | 394 | 1.19e-36 | 135 |
MS.gene074631.t1 | MTR_4g114320 | 29.353 | 201 | 127 | 4 | 19 | 219 | 212 | 397 | 3.47e-19 | 87.8 |
MS.gene074631.t1 | MTR_4g119770 | 27.523 | 327 | 181 | 7 | 28 | 314 | 16 | 326 | 1.65e-34 | 129 |
MS.gene074631.t1 | MTR_4g119770 | 27.941 | 204 | 130 | 5 | 120 | 312 | 12 | 209 | 9.50e-19 | 85.9 |
MS.gene074631.t1 | MTR_2g436930 | 26.480 | 321 | 188 | 5 | 28 | 313 | 17 | 324 | 2.01e-34 | 128 |
MS.gene074631.t1 | MTR_2g436930 | 29.439 | 214 | 136 | 5 | 108 | 312 | 1 | 208 | 6.86e-22 | 94.7 |
MS.gene074631.t1 | MTR_4g016730 | 30.070 | 286 | 155 | 7 | 37 | 310 | 100 | 352 | 9.79e-31 | 119 |
MS.gene074631.t1 | MTR_8g090210 | 30.063 | 316 | 177 | 7 | 24 | 317 | 108 | 401 | 2.18e-30 | 119 |
MS.gene074631.t1 | MTR_5g081150 | 33.913 | 230 | 124 | 5 | 25 | 240 | 33 | 248 | 9.26e-30 | 114 |
MS.gene074631.t1 | MTR_5g081150 | 28.509 | 228 | 138 | 7 | 104 | 320 | 16 | 229 | 7.67e-14 | 70.5 |
MS.gene074631.t1 | MTR_5g081150 | 33.913 | 230 | 124 | 5 | 25 | 240 | 33 | 248 | 1.12e-29 | 114 |
MS.gene074631.t1 | MTR_5g081150 | 28.509 | 228 | 138 | 7 | 104 | 320 | 16 | 229 | 9.80e-14 | 70.5 |
MS.gene074631.t1 | MTR_3g074490 | 30.255 | 314 | 175 | 7 | 24 | 315 | 114 | 405 | 2.96e-29 | 116 |
MS.gene074631.t1 | MTR_7g109135 | 28.956 | 297 | 186 | 6 | 28 | 313 | 24 | 306 | 3.01e-29 | 114 |
MS.gene074631.t1 | MTR_7g109135 | 31.138 | 167 | 97 | 6 | 65 | 225 | 165 | 319 | 3.89e-12 | 66.6 |
MS.gene074631.t1 | MTR_4g078545 | 29.097 | 299 | 191 | 6 | 22 | 310 | 71 | 358 | 6.81e-29 | 114 |
MS.gene074631.t1 | MTR_4g005330 | 26.032 | 315 | 187 | 10 | 24 | 315 | 64 | 355 | 4.64e-28 | 112 |
MS.gene074631.t1 | MTR_3g028590 | 28.094 | 299 | 194 | 6 | 22 | 310 | 89 | 376 | 1.38e-27 | 111 |
MS.gene074631.t1 | MTR_3g028590 | 28.094 | 299 | 194 | 6 | 22 | 310 | 93 | 380 | 1.41e-27 | 111 |
MS.gene074631.t1 | MTR_2g098070 | 28.094 | 299 | 194 | 6 | 22 | 310 | 62 | 349 | 1.83e-27 | 110 |
MS.gene074631.t1 | MTR_4g005330 | 25.962 | 312 | 185 | 10 | 27 | 315 | 1 | 289 | 2.28e-27 | 108 |
MS.gene074631.t1 | MTR_4g119770 | 28.077 | 260 | 142 | 5 | 28 | 256 | 16 | 261 | 8.10e-27 | 106 |
MS.gene074631.t1 | MTR_4g119770 | 27.941 | 204 | 130 | 5 | 120 | 312 | 12 | 209 | 4.65e-19 | 85.5 |
MS.gene074631.t1 | MTR_7g084400 | 33.333 | 222 | 118 | 6 | 26 | 236 | 207 | 409 | 8.46e-27 | 109 |
MS.gene074631.t1 | MTR_7g084400 | 27.041 | 196 | 118 | 5 | 122 | 311 | 207 | 383 | 5.46e-16 | 78.6 |
MS.gene074631.t1 | MTR_8g036880 | 27.090 | 299 | 198 | 6 | 22 | 310 | 98 | 386 | 4.30e-26 | 107 |
MS.gene074631.t1 | MTR_7g109135 | 27.946 | 297 | 182 | 6 | 28 | 313 | 24 | 299 | 2.34e-25 | 103 |
MS.gene074631.t1 | MTR_7g109135 | 31.138 | 167 | 97 | 6 | 65 | 225 | 158 | 312 | 4.55e-12 | 66.2 |
MS.gene074631.t1 | MTR_1g087840 | 28.425 | 292 | 174 | 9 | 38 | 313 | 31 | 303 | 3.17e-25 | 103 |
MS.gene074631.t1 | MTR_1g087840 | 30.556 | 216 | 134 | 8 | 112 | 322 | 8 | 212 | 2.29e-14 | 72.8 |
MS.gene074631.t1 | MTR_8g107270 | 26.045 | 311 | 198 | 10 | 24 | 320 | 16 | 308 | 6.71e-25 | 102 |
MS.gene074631.t1 | MTR_5g055410 | 27.719 | 285 | 185 | 6 | 38 | 313 | 33 | 305 | 4.79e-24 | 100 |
MS.gene074631.t1 | MTR_2g436930 | 28.972 | 214 | 121 | 3 | 118 | 313 | 34 | 234 | 1.44e-23 | 97.4 |
MS.gene074631.t1 | MTR_2g436930 | 25.862 | 232 | 150 | 6 | 3 | 225 | 20 | 238 | 2.00e-14 | 72.0 |
MS.gene074631.t1 | MTR_8g098240 | 25.524 | 286 | 191 | 6 | 27 | 311 | 321 | 585 | 6.44e-21 | 93.6 |
MS.gene074631.t1 | MTR_7g109135 | 27.801 | 241 | 154 | 5 | 79 | 313 | 2 | 228 | 6.68e-21 | 90.1 |
MS.gene074631.t1 | MTR_7g109135 | 30.952 | 168 | 98 | 6 | 64 | 225 | 86 | 241 | 3.08e-12 | 65.9 |
MS.gene074631.t1 | MTR_5g030530 | 25.333 | 300 | 207 | 6 | 23 | 313 | 5 | 296 | 1.14e-20 | 90.5 |
MS.gene074631.t1 | MTR_8g066975 | 25.333 | 300 | 207 | 6 | 23 | 313 | 5 | 296 | 6.74e-20 | 88.6 |
MS.gene074631.t1 | MTR_8g076760 | 24.497 | 298 | 191 | 8 | 42 | 320 | 30 | 312 | 4.37e-18 | 83.6 |
MS.gene074631.t1 | MTR_7g109135 | 30.108 | 186 | 110 | 5 | 134 | 313 | 36 | 207 | 7.43e-18 | 81.3 |
MS.gene074631.t1 | MTR_7g109135 | 30.952 | 168 | 98 | 6 | 64 | 225 | 65 | 220 | 1.43e-12 | 66.2 |
MS.gene074631.t1 | MTR_4g012850 | 26.552 | 290 | 173 | 9 | 16 | 288 | 1 | 267 | 3.12e-17 | 81.3 |
MS.gene074631.t1 | MTR_4g012850 | 29.798 | 198 | 117 | 6 | 20 | 210 | 104 | 286 | 1.39e-16 | 79.3 |
MS.gene074631.t1 | MTR_2g102010 | 31.016 | 187 | 111 | 3 | 39 | 219 | 123 | 297 | 3.60e-16 | 77.8 |
MS.gene074631.t1 | MTR_2g102010 | 22.368 | 304 | 207 | 10 | 12 | 307 | 6 | 288 | 3.03e-11 | 63.5 |
MS.gene074631.t1 | MTR_3g025800 | 23.582 | 335 | 215 | 9 | 17 | 322 | 20 | 342 | 3.91e-16 | 78.6 |
MS.gene074631.t1 | MTR_8g092080 | 31.019 | 216 | 130 | 6 | 17 | 232 | 125 | 321 | 5.48e-16 | 77.8 |
MS.gene074631.t1 | MTR_8g092080 | 21.384 | 318 | 199 | 8 | 3 | 313 | 32 | 305 | 6.26e-11 | 62.8 |
MS.gene074631.t1 | MTR_5g073040 | 25.000 | 300 | 191 | 7 | 26 | 314 | 39 | 315 | 8.83e-16 | 77.0 |
MS.gene074631.t1 | MTR_7g015870 | 29.187 | 209 | 118 | 5 | 27 | 219 | 123 | 317 | 4.34e-15 | 75.1 |
MS.gene074631.t1 | MTR_7g015870 | 25.092 | 271 | 160 | 11 | 71 | 320 | 70 | 318 | 5.37e-11 | 63.2 |
MS.gene074631.t1 | MTR_6g034515 | 25.888 | 197 | 135 | 3 | 27 | 222 | 161 | 347 | 6.82e-14 | 72.0 |
MS.gene074631.t1 | MTR_6g034515 | 24.161 | 298 | 184 | 11 | 42 | 322 | 83 | 355 | 4.87e-12 | 66.6 |
MS.gene074631.t1 | MTR_7g117030 | 23.755 | 261 | 168 | 9 | 68 | 310 | 85 | 332 | 2.25e-13 | 70.5 |
MS.gene074631.t1 | MTR_7g015870 | 28.431 | 204 | 116 | 5 | 27 | 214 | 119 | 308 | 5.73e-13 | 68.9 |
MS.gene074631.t1 | MTR_5g081910 | 23.826 | 298 | 201 | 8 | 42 | 314 | 24 | 320 | 1.70e-12 | 67.8 |
MS.gene074631.t1 | MTR_1g097890 | 28.218 | 202 | 121 | 6 | 27 | 222 | 132 | 315 | 2.14e-12 | 67.0 |
MS.gene074631.t1 | MTR_1g097890 | 21.562 | 320 | 207 | 8 | 6 | 319 | 31 | 312 | 1.27e-11 | 64.7 |
MS.gene074631.t1 | MTR_3g100570 | 24.500 | 200 | 129 | 5 | 24 | 214 | 122 | 308 | 2.52e-12 | 67.0 |
MS.gene074631.t1 | MTR_1g090330 | 23.039 | 204 | 135 | 4 | 20 | 214 | 105 | 295 | 4.20e-12 | 66.2 |
MS.gene074631.t1 | MTR_1g090330 | 19.454 | 293 | 218 | 6 | 25 | 310 | 13 | 294 | 9.32e-11 | 62.0 |
MS.gene074631.t1 | MTR_5g081910 | 25.000 | 208 | 141 | 5 | 121 | 314 | 40 | 246 | 7.21e-12 | 65.1 |
MS.gene074631.t1 | MTR_4g088545 | 27.094 | 203 | 134 | 4 | 24 | 221 | 10 | 203 | 9.06e-12 | 64.3 |
MS.gene074631.t1 | MTR_1g088995 | 21.875 | 320 | 212 | 9 | 3 | 310 | 11 | 304 | 9.71e-12 | 65.1 |
MS.gene074631.t1 | MTR_4g088545 | 27.273 | 198 | 130 | 4 | 24 | 216 | 10 | 198 | 1.17e-11 | 64.7 |
MS.gene074631.t1 | MTR_4g088545 | 27.273 | 198 | 130 | 4 | 24 | 216 | 10 | 198 | 1.40e-11 | 64.7 |
MS.gene074631.t1 | MTR_6g015860 | 24.759 | 311 | 191 | 12 | 32 | 320 | 21 | 310 | 3.17e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074631.t1 | AT4G26180 | 67.619 | 315 | 101 | 1 | 7 | 320 | 2 | 316 | 7.64e-161 | 452 |
MS.gene074631.t1 | AT4G26180 | 66.897 | 290 | 95 | 1 | 7 | 295 | 2 | 291 | 8.65e-146 | 412 |
MS.gene074631.t1 | AT1G14560 | 56.869 | 313 | 127 | 3 | 14 | 319 | 15 | 326 | 3.79e-120 | 349 |
MS.gene074631.t1 | AT1G14560 | 56.401 | 289 | 118 | 3 | 14 | 295 | 15 | 302 | 5.42e-106 | 312 |
MS.gene074631.t1 | AT1G14560 | 56.769 | 229 | 91 | 3 | 98 | 319 | 1 | 228 | 1.36e-86 | 260 |
MS.gene074631.t1 | AT1G14560 | 28.959 | 221 | 131 | 6 | 11 | 213 | 7 | 219 | 6.03e-17 | 79.0 |
MS.gene074631.t1 | AT4G01100 | 35.913 | 323 | 170 | 6 | 22 | 318 | 38 | 349 | 2.78e-60 | 196 |
MS.gene074631.t1 | AT4G01100 | 34.718 | 337 | 169 | 7 | 22 | 318 | 38 | 363 | 7.37e-58 | 191 |
MS.gene074631.t1 | AT4G01100 | 34.839 | 310 | 165 | 6 | 35 | 318 | 1 | 299 | 1.33e-54 | 180 |
MS.gene074631.t1 | AT3G55640 | 36.308 | 325 | 176 | 8 | 5 | 314 | 18 | 326 | 7.82e-54 | 179 |
MS.gene074631.t1 | AT3G55640 | 36.308 | 325 | 176 | 8 | 5 | 314 | 18 | 326 | 7.82e-54 | 179 |
MS.gene074631.t1 | AT3G53940 | 34.839 | 310 | 171 | 7 | 24 | 317 | 71 | 365 | 3.74e-51 | 173 |
MS.gene074631.t1 | AT2G37890 | 36.066 | 305 | 165 | 6 | 24 | 313 | 43 | 332 | 9.54e-51 | 171 |
MS.gene074631.t1 | AT5G61810 | 34.459 | 296 | 164 | 7 | 23 | 313 | 62 | 332 | 2.33e-49 | 168 |
MS.gene074631.t1 | AT5G61810 | 32.653 | 196 | 114 | 3 | 26 | 219 | 156 | 335 | 8.16e-22 | 94.4 |
MS.gene074631.t1 | AT5G61810 | 25.510 | 196 | 121 | 5 | 122 | 314 | 65 | 238 | 1.20e-11 | 65.1 |
MS.gene074631.t1 | AT5G61810 | 34.459 | 296 | 164 | 7 | 23 | 313 | 205 | 475 | 4.64e-48 | 168 |
MS.gene074631.t1 | AT5G61810 | 32.653 | 196 | 114 | 3 | 26 | 219 | 299 | 478 | 1.42e-21 | 95.1 |
MS.gene074631.t1 | AT5G61810 | 25.510 | 196 | 121 | 5 | 122 | 314 | 208 | 381 | 3.01e-11 | 64.3 |
MS.gene074631.t1 | AT5G51050 | 32.660 | 297 | 171 | 7 | 26 | 315 | 223 | 497 | 4.21e-46 | 163 |
MS.gene074631.t1 | AT5G51050 | 31.500 | 200 | 112 | 6 | 26 | 219 | 318 | 498 | 2.32e-18 | 85.9 |
MS.gene074631.t1 | AT5G56450 | 31.949 | 313 | 175 | 7 | 22 | 313 | 30 | 325 | 3.28e-41 | 146 |
MS.gene074631.t1 | AT5G56450 | 22.870 | 223 | 154 | 6 | 110 | 321 | 22 | 237 | 9.43e-11 | 62.4 |
MS.gene074631.t1 | AT5G07320 | 31.560 | 282 | 165 | 6 | 36 | 313 | 219 | 476 | 3.79e-41 | 149 |
MS.gene074631.t1 | AT5G07320 | 31.156 | 199 | 113 | 5 | 26 | 219 | 300 | 479 | 5.04e-19 | 87.8 |
MS.gene074631.t1 | AT5G07320 | 26.111 | 180 | 113 | 4 | 136 | 314 | 223 | 383 | 1.83e-11 | 65.1 |
MS.gene074631.t1 | AT4G32400 | 33.893 | 298 | 165 | 7 | 24 | 313 | 112 | 385 | 1.30e-40 | 146 |
MS.gene074631.t1 | AT4G32400 | 28.155 | 206 | 132 | 5 | 19 | 223 | 202 | 392 | 2.21e-16 | 79.7 |
MS.gene074631.t1 | AT4G32400 | 26.601 | 203 | 123 | 4 | 122 | 320 | 114 | 294 | 1.97e-13 | 70.9 |
MS.gene074631.t1 | AT3G51870 | 30.070 | 286 | 158 | 5 | 37 | 310 | 102 | 357 | 6.98e-39 | 141 |
MS.gene074631.t1 | AT3G51870 | 24.828 | 145 | 101 | 2 | 170 | 313 | 132 | 269 | 8.31e-12 | 65.9 |
MS.gene074631.t1 | AT3G55640 | 37.052 | 251 | 127 | 8 | 5 | 240 | 18 | 252 | 1.48e-37 | 135 |
MS.gene074631.t1 | AT3G55640 | 29.268 | 205 | 120 | 6 | 121 | 314 | 37 | 227 | 4.08e-17 | 80.1 |
MS.gene074631.t1 | AT3G55640 | 37.052 | 251 | 127 | 8 | 5 | 240 | 18 | 252 | 1.48e-37 | 135 |
MS.gene074631.t1 | AT3G55640 | 29.268 | 205 | 120 | 6 | 121 | 314 | 37 | 227 | 4.08e-17 | 80.1 |
MS.gene074631.t1 | AT3G53940 | 35.776 | 232 | 119 | 6 | 24 | 240 | 71 | 287 | 2.25e-36 | 132 |
MS.gene074631.t1 | AT3G53940 | 28.986 | 207 | 122 | 6 | 117 | 312 | 68 | 260 | 9.17e-14 | 70.9 |
MS.gene074631.t1 | AT5G01500 | 30.137 | 292 | 156 | 6 | 37 | 313 | 130 | 388 | 1.72e-35 | 133 |
MS.gene074631.t1 | AT5G48970 | 27.778 | 324 | 183 | 6 | 28 | 313 | 24 | 334 | 3.15e-35 | 130 |
MS.gene074631.t1 | AT5G48970 | 29.048 | 210 | 136 | 4 | 112 | 313 | 12 | 216 | 6.33e-21 | 92.0 |
MS.gene074631.t1 | AT3G21390 | 27.864 | 323 | 183 | 5 | 28 | 313 | 21 | 330 | 4.62e-34 | 127 |
MS.gene074631.t1 | AT3G21390 | 28.846 | 208 | 135 | 4 | 112 | 312 | 9 | 210 | 1.64e-19 | 88.2 |
MS.gene074631.t1 | AT3G21390 | 22.624 | 221 | 150 | 4 | 3 | 210 | 112 | 324 | 6.21e-11 | 63.2 |
MS.gene074631.t1 | AT3G21390 | 27.778 | 324 | 184 | 5 | 28 | 314 | 43 | 353 | 4.75e-34 | 128 |
MS.gene074631.t1 | AT3G21390 | 28.846 | 208 | 135 | 4 | 112 | 312 | 31 | 232 | 2.58e-19 | 87.8 |
MS.gene074631.t1 | AT3G21390 | 22.624 | 221 | 150 | 4 | 3 | 210 | 134 | 346 | 5.69e-11 | 63.2 |
MS.gene074631.t1 | AT3G20240 | 27.302 | 315 | 181 | 9 | 23 | 313 | 49 | 339 | 2.43e-32 | 123 |
MS.gene074631.t1 | AT4G28390 | 29.167 | 312 | 194 | 7 | 15 | 310 | 66 | 366 | 2.67e-30 | 118 |
MS.gene074631.t1 | AT4G28390 | 29.167 | 312 | 194 | 7 | 15 | 310 | 66 | 366 | 2.67e-30 | 118 |
MS.gene074631.t1 | AT5G64970 | 30.380 | 316 | 176 | 6 | 24 | 317 | 133 | 426 | 5.37e-30 | 118 |
MS.gene074631.t1 | AT5G64970 | 30.032 | 313 | 175 | 6 | 27 | 317 | 12 | 302 | 8.21e-30 | 115 |
MS.gene074631.t1 | AT5G48970 | 27.106 | 273 | 162 | 4 | 65 | 313 | 4 | 263 | 2.11e-29 | 113 |
MS.gene074631.t1 | AT5G13490 | 29.431 | 299 | 191 | 6 | 22 | 310 | 84 | 372 | 4.49e-29 | 115 |
MS.gene074631.t1 | AT5G13490 | 29.431 | 299 | 191 | 6 | 22 | 310 | 84 | 372 | 4.49e-29 | 115 |
MS.gene074631.t1 | AT3G08580 | 29.097 | 299 | 192 | 6 | 22 | 310 | 80 | 368 | 1.04e-27 | 111 |
MS.gene074631.t1 | AT3G08580 | 29.097 | 299 | 192 | 6 | 22 | 310 | 80 | 368 | 1.04e-27 | 111 |
MS.gene074631.t1 | AT1G78180 | 31.761 | 318 | 165 | 9 | 24 | 315 | 126 | 417 | 3.54e-27 | 110 |
MS.gene074631.t1 | AT5G17400 | 27.891 | 294 | 184 | 6 | 22 | 301 | 10 | 289 | 1.17e-25 | 104 |
MS.gene074631.t1 | AT4G11440 | 29.139 | 302 | 182 | 8 | 22 | 313 | 324 | 603 | 1.10e-24 | 104 |
MS.gene074631.t1 | AT4G11440 | 29.139 | 302 | 182 | 8 | 22 | 313 | 324 | 603 | 1.10e-24 | 104 |
MS.gene074631.t1 | AT1G25380 | 26.990 | 289 | 185 | 8 | 38 | 314 | 33 | 307 | 1.53e-24 | 102 |
MS.gene074631.t1 | AT1G25380 | 26.990 | 289 | 185 | 8 | 38 | 314 | 33 | 307 | 1.53e-24 | 102 |
MS.gene074631.t1 | AT2G47490 | 26.962 | 293 | 186 | 7 | 38 | 317 | 29 | 306 | 8.80e-23 | 96.7 |
MS.gene074631.t1 | AT2G47490 | 30.729 | 192 | 117 | 6 | 135 | 322 | 30 | 209 | 5.87e-14 | 71.6 |
MS.gene074631.t1 | AT5G64970 | 28.571 | 294 | 166 | 6 | 24 | 295 | 133 | 404 | 4.08e-22 | 96.3 |
MS.gene074631.t1 | AT5G66380 | 26.923 | 312 | 188 | 10 | 25 | 314 | 8 | 301 | 2.39e-19 | 87.0 |
MS.gene074631.t1 | AT5G46800 | 26.936 | 297 | 202 | 7 | 27 | 313 | 8 | 299 | 1.84e-18 | 84.7 |
MS.gene074631.t1 | AT5G46800 | 26.936 | 297 | 202 | 7 | 27 | 313 | 8 | 299 | 1.84e-18 | 84.7 |
MS.gene074631.t1 | AT5G46800 | 26.936 | 297 | 202 | 7 | 27 | 313 | 8 | 299 | 1.84e-18 | 84.7 |
MS.gene074631.t1 | AT2G30160 | 25.083 | 303 | 199 | 7 | 22 | 314 | 38 | 322 | 4.92e-18 | 84.0 |
MS.gene074631.t1 | AT2G33820 | 24.917 | 301 | 197 | 10 | 22 | 307 | 14 | 300 | 3.64e-17 | 80.9 |
MS.gene074631.t1 | AT1G74240 | 25.948 | 343 | 219 | 9 | 1 | 314 | 1 | 337 | 1.34e-16 | 80.1 |
MS.gene074631.t1 | AT1G07030 | 23.934 | 305 | 197 | 6 | 22 | 314 | 36 | 317 | 2.90e-16 | 78.6 |
MS.gene074631.t1 | AT2G39970 | 25.085 | 295 | 193 | 8 | 42 | 309 | 24 | 317 | 2.09e-15 | 76.3 |
MS.gene074631.t1 | AT1G34065 | 29.648 | 199 | 122 | 4 | 25 | 223 | 162 | 342 | 3.57e-15 | 75.5 |
MS.gene074631.t1 | AT1G34065 | 22.148 | 298 | 182 | 9 | 24 | 313 | 80 | 335 | 2.27e-11 | 64.3 |
MS.gene074631.t1 | AT1G34065 | 29.648 | 199 | 122 | 4 | 25 | 223 | 155 | 335 | 4.03e-15 | 75.5 |
MS.gene074631.t1 | AT1G34065 | 22.148 | 298 | 182 | 9 | 24 | 313 | 73 | 328 | 2.01e-11 | 64.7 |
MS.gene074631.t1 | AT2G33820 | 24.272 | 309 | 197 | 11 | 22 | 307 | 14 | 308 | 1.14e-14 | 73.9 |
MS.gene074631.t1 | AT1G14140 | 22.373 | 295 | 206 | 7 | 26 | 310 | 16 | 297 | 3.33e-14 | 72.4 |
MS.gene074631.t1 | AT1G79900 | 30.481 | 187 | 104 | 5 | 29 | 210 | 112 | 277 | 1.29e-13 | 70.5 |
MS.gene074631.t1 | AT4G39460 | 22.293 | 314 | 198 | 7 | 6 | 313 | 38 | 311 | 3.22e-13 | 69.7 |
MS.gene074631.t1 | AT4G39460 | 28.293 | 205 | 128 | 5 | 14 | 218 | 128 | 313 | 1.04e-12 | 68.2 |
MS.gene074631.t1 | AT4G39460 | 22.293 | 314 | 198 | 7 | 6 | 313 | 38 | 311 | 3.22e-13 | 69.7 |
MS.gene074631.t1 | AT4G39460 | 28.293 | 205 | 128 | 5 | 14 | 218 | 128 | 313 | 1.04e-12 | 68.2 |
MS.gene074631.t1 | AT4G39460 | 22.293 | 314 | 198 | 7 | 6 | 313 | 38 | 311 | 3.22e-13 | 69.7 |
MS.gene074631.t1 | AT4G39460 | 28.293 | 205 | 128 | 5 | 14 | 218 | 128 | 313 | 1.04e-12 | 68.2 |
MS.gene074631.t1 | AT5G15640 | 26.148 | 283 | 163 | 10 | 32 | 288 | 32 | 294 | 9.01e-13 | 68.6 |
MS.gene074631.t1 | AT5G42130 | 24.752 | 303 | 191 | 9 | 35 | 322 | 127 | 407 | 9.82e-13 | 68.9 |
MS.gene074631.t1 | AT5G42130 | 23.005 | 213 | 150 | 4 | 14 | 222 | 197 | 399 | 5.40e-11 | 63.5 |
MS.gene074631.t1 | AT5G15640 | 26.148 | 283 | 163 | 10 | 32 | 288 | 25 | 287 | 1.14e-12 | 68.2 |
MS.gene074631.t1 | AT5G58970 | 21.865 | 311 | 203 | 8 | 22 | 314 | 12 | 300 | 1.76e-12 | 67.4 |
MS.gene074631.t1 | AT5G58970 | 25.604 | 207 | 131 | 4 | 13 | 214 | 108 | 296 | 5.90e-12 | 65.9 |
MS.gene074631.t1 | AT5G26200 | 23.824 | 319 | 218 | 7 | 8 | 310 | 25 | 334 | 2.00e-12 | 67.4 |
MS.gene074631.t1 | AT4G27940 | 22.814 | 263 | 176 | 7 | 68 | 313 | 155 | 407 | 6.45e-12 | 66.2 |
MS.gene074631.t1 | AT3G54110 | 28.421 | 190 | 117 | 7 | 136 | 316 | 29 | 208 | 1.24e-11 | 64.7 |
MS.gene074631.t1 | AT1G74240 | 24.150 | 294 | 200 | 5 | 39 | 314 | 1 | 289 | 1.82e-11 | 64.3 |
MS.gene074631.t1 | AT2G46320 | 26.378 | 254 | 166 | 9 | 68 | 310 | 109 | 352 | 2.20e-11 | 64.7 |
MS.gene074631.t1 | AT2G33820 | 25.991 | 227 | 149 | 7 | 22 | 238 | 14 | 231 | 2.52e-11 | 63.5 |
MS.gene074631.t1 | AT4G03115 | 22.185 | 302 | 204 | 7 | 19 | 311 | 60 | 339 | 8.93e-11 | 62.8 |
Find 0 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTTGAGAAAATGAAAT+TGG | - | 42519:4783-4802 | MS.gene074631:CDS | 15.0% |
!!! | TCATTTTCTCAAATTATTAT+CGG | + | 42519:4780-4799 | MS.gene074631:intergenic | 15.0% |
!! | AATAATTAGATATGTTGTGT+TGG | - | 42519:4280-4299 | MS.gene074631:CDS | 20.0% |
!! | AGTTGAGAATGATAATTATA+AGG | + | 42519:4955-4974 | MS.gene074631:intergenic | 20.0% |
!! | CTTTCAAAAACTTATAAAGA+GGG | - | 42519:5702-5721 | MS.gene074631:intron | 20.0% |
!! | GTTGAGAATGATAATTATAA+GGG | + | 42519:4954-4973 | MS.gene074631:intergenic | 20.0% |
!! | TAACAAAAGAAAAAACAAGA+AGG | + | 42519:3850-3869 | MS.gene074631:intergenic | 20.0% |
!! | TCTTTCAAAAACTTATAAAG+AGG | - | 42519:5701-5720 | MS.gene074631:intron | 20.0% |
!!! | TCATTTTCTCATATCATTAT+CGG | + | 42519:3788-3807 | MS.gene074631:intergenic | 20.0% |
!!! | TTTGAAATTCTACTTTTATG+AGG | - | 42519:5894-5913 | MS.gene074631:intron | 20.0% |
! | AAATCCTTAGTTATACAGAA+CGG | + | 42519:6289-6308 | MS.gene074631:intergenic | 25.0% |
! | AATAATGAACAAGTTTATCG+AGG | - | 42519:5666-5685 | MS.gene074631:intron | 25.0% |
! | AATTTAAATCTGCTTGTGTT+TGG | - | 42519:5759-5778 | MS.gene074631:intron | 25.0% |
! | ATAATGAACAAGTTTATCGA+GGG | - | 42519:5667-5686 | MS.gene074631:intron | 25.0% |
! | CTAGTAAAAAAATGAGATCT+TGG | - | 42519:4601-4620 | MS.gene074631:CDS | 25.0% |
! | TAGAACTCTTATGTTAATCA+TGG | - | 42519:5831-5850 | MS.gene074631:intron | 25.0% |
! | TAGTTATAGTTACAGACATA+AGG | - | 42519:4547-4566 | MS.gene074631:CDS | 25.0% |
! | TTAATCAATCTATGGTCAAT+TGG | + | 42519:5131-5150 | MS.gene074631:intergenic | 25.0% |
! | TTGAATCATTGAAAGTCAAT+GGG | - | 42519:4373-4392 | MS.gene074631:intron | 25.0% |
! | TTTGAATTTCTTACGAAAGA+GGG | - | 42519:3991-4010 | MS.gene074631:CDS | 25.0% |
!! | TTTTGAATTTCTTACGAAAG+AGG | - | 42519:3990-4009 | MS.gene074631:CDS | 25.0% |
!!! | ATTATTATTGATGTCGACTT+CGG | + | 42519:4659-4678 | MS.gene074631:intergenic | 25.0% |
!!! | GCATTGTGATTTTGAAAAAT+AGG | - | 42519:4718-4737 | MS.gene074631:intron | 25.0% |
!!! | TAAGGATTTTTTTGCAATTC+AGG | - | 42519:6300-6319 | MS.gene074631:CDS | 25.0% |
ACAAAATACAACCAAAGTCA+TGG | + | 42519:5581-5600 | MS.gene074631:intergenic | 30.0% | |
ACTAGCATAAAACCTACAAT+AGG | + | 42519:4576-4595 | MS.gene074631:intergenic | 30.0% | |
CTAGCATAAAACCTACAATA+GGG | + | 42519:4575-4594 | MS.gene074631:intergenic | 30.0% | |
CTTATCCACTTGACTTAATT+CGG | - | 42519:5497-5516 | MS.gene074631:intron | 30.0% | |
CTTATGTAACAGTAATGGTT+AGG | + | 42519:4442-4461 | MS.gene074631:intergenic | 30.0% | |
CTTGAATCATTGAAAGTCAA+TGG | - | 42519:4372-4391 | MS.gene074631:intron | 30.0% | |
CTTGTATGAGTTAGTTAGTT+AGG | - | 42519:4079-4098 | MS.gene074631:CDS | 30.0% | |
GATTGCGATTAATCAATCTA+TGG | + | 42519:5139-5158 | MS.gene074631:intergenic | 30.0% | |
GCTGAGTATCAATTACATAA+AGG | - | 42519:6220-6239 | MS.gene074631:intron | 30.0% | |
TACAGGTAGATAGAAATCAT+AGG | - | 42519:5251-5270 | MS.gene074631:intron | 30.0% | |
TCAAAAACTTATAAAGAGGG+TGG | - | 42519:5705-5724 | MS.gene074631:intron | 30.0% | |
TGAATCATTGAAAGTCAATG+GGG | - | 42519:4374-4393 | MS.gene074631:intron | 30.0% | |
TTGTTCATTATTTACCATCC+CGG | + | 42519:5658-5677 | MS.gene074631:intergenic | 30.0% | |
! | AAGAGGGTAACTTTTTATGA+AGG | - | 42519:4007-4026 | MS.gene074631:CDS | 30.0% |
! | ACTAACTTACTAACTGATTC+AGG | + | 42519:4531-4550 | MS.gene074631:intergenic | 30.0% |
!! | TCTCATAGTCCCTTTTAATT+CGG | + | 42519:6150-6169 | MS.gene074631:intergenic | 30.0% |
!!! | GTACAGTTACAGACATTTTT+TGG | - | 42519:4101-4120 | MS.gene074631:intron | 30.0% |
ACCAATGTGAAGTTATTTGC+AGG | - | 42519:5308-5327 | MS.gene074631:intron | 35.0% | |
ACCTTTCCAAACATTAGGAA+AGG | + | 42519:5422-5441 | MS.gene074631:intergenic | 35.0% | |
ACGTCTCAAAATTCTCTTTC+AGG | - | 42519:3702-3721 | MS.gene074631:intron | 35.0% | |
AGAACCGTTCTGTATAACTA+AGG | - | 42519:6282-6301 | MS.gene074631:CDS | 35.0% | |
ATAGGACATAAAATGAAGGC+CGG | + | 42519:5371-5390 | MS.gene074631:intergenic | 35.0% | |
ATCATAAACTGTGAAGCCAA+TGG | + | 42519:6341-6360 | MS.gene074631:intergenic | 35.0% | |
CAATGTGAAGTTATTTGCAG+GGG | - | 42519:5310-5329 | MS.gene074631:intron | 35.0% | |
CACATAAATAGAGATGTGTC+TGG | + | 42519:4328-4347 | MS.gene074631:intergenic | 35.0% | |
CATTGCATGCAATTAGTGAA+TGG | - | 42519:5086-5105 | MS.gene074631:intron | 35.0% | |
CCAATGTGAAGTTATTTGCA+GGG | - | 42519:5309-5328 | MS.gene074631:intron | 35.0% | |
CCACTCTTATGTAACAGTAA+TGG | + | 42519:4447-4466 | MS.gene074631:intergenic | 35.0% | |
CCATTACTGTTACATAAGAG+TGG | - | 42519:4444-4463 | MS.gene074631:CDS | 35.0% | |
CCTCATAGGACATAAAATGA+AGG | + | 42519:5375-5394 | MS.gene074631:intergenic | 35.0% | |
CTAACTAACTCATACAAGTG+AGG | + | 42519:4077-4096 | MS.gene074631:intergenic | 35.0% | |
CTGAAGAAGCCGAATTAAAA+GGG | - | 42519:6138-6157 | MS.gene074631:intron | 35.0% | |
GATACAAAGTTAACCTGACT+AGG | - | 42519:6097-6116 | MS.gene074631:intron | 35.0% | |
GGTAGATAGAAATCATAGGT+AGG | - | 42519:5255-5274 | MS.gene074631:intron | 35.0% | |
GTCATGGATGAAAACTGATT+TGG | + | 42519:5565-5584 | MS.gene074631:intergenic | 35.0% | |
TCTGAAGAAGCCGAATTAAA+AGG | - | 42519:6137-6156 | MS.gene074631:intron | 35.0% | |
TGAATGACACTGAAACTCAA+TGG | - | 42519:3933-3952 | MS.gene074631:intron | 35.0% | |
TTAGTCCGAATTAAGTCAAG+TGG | + | 42519:5505-5524 | MS.gene074631:intergenic | 35.0% | |
! | ATGCTTTTCTTGTAATCCTC+GGG | + | 42519:5937-5956 | MS.gene074631:intergenic | 35.0% |
! | CCTTCATTTTATGTCCTATG+AGG | - | 42519:5372-5391 | MS.gene074631:intron | 35.0% |
! | CTCAAAATTCTCTTTCAGGT+AGG | - | 42519:3706-3725 | MS.gene074631:intron | 35.0% |
! | CTTTTGAGCAATCAAAACCA+TGG | + | 42519:6174-6193 | MS.gene074631:intergenic | 35.0% |
! | GATGCTTTTCTTGTAATCCT+CGG | + | 42519:5938-5957 | MS.gene074631:intergenic | 35.0% |
! | TCAGTTTTCATCCATGACTT+TGG | - | 42519:5567-5586 | MS.gene074631:intron | 35.0% |
!! | AAGAAGGAAGTTTTGTAGCA+CGG | + | 42519:3834-3853 | MS.gene074631:intergenic | 35.0% |
!! | GGATTACAAGAAAAGCATCA+TGG | - | 42519:5939-5958 | MS.gene074631:intron | 35.0% |
!! | TGTCAATTTGTGTTTGGTGT+TGG | + | 42519:4749-4768 | MS.gene074631:intergenic | 35.0% |
!!! | AGAATTTTGAGACGTTCAAG+AGG | + | 42519:3697-3716 | MS.gene074631:intergenic | 35.0% |
!!! | GTTTTGATTGCTCAAAAGCA+AGG | - | 42519:6176-6195 | MS.gene074631:intron | 35.0% |
AAAAGGGACTATGAGATCCA+TGG | - | 42519:6154-6173 | MS.gene074631:intron | 40.0% | |
AATGGTCGGAAACAGAAACA+TGG | - | 42519:5058-5077 | MS.gene074631:intron | 40.0% | |
AGAAGTTCTTTGGCAAAGAG+AGG | + | 42519:3631-3650 | MS.gene074631:intergenic | 40.0% | |
AGAATTTCAAACCCGCGTAT+GGG | + | 42519:5885-5904 | MS.gene074631:intergenic | 40.0% | |
AGGCTTGCATGATCAATCTT+CGG | + | 42519:5402-5421 | MS.gene074631:intergenic | 40.0% | |
AGTACCATCAAGAGATGAAG+TGG | - | 42519:6381-6400 | MS.gene074631:CDS | 40.0% | |
ATAAAATGAAGGCCGGCATA+AGG | + | 42519:5364-5383 | MS.gene074631:intergenic | 40.0% | |
CAATCTTCGGTATTCCTCAT+AGG | + | 42519:5389-5408 | MS.gene074631:intergenic | 40.0% | |
CATATCCTCTTGAAGTTGTC+AGG | - | 42519:6010-6029 | MS.gene074631:intron | 40.0% | |
CCCTGCAAATAACTTCACAT+TGG | + | 42519:5312-5331 | MS.gene074631:intergenic | 40.0% | |
GAAGTTATTTGCAGGGGAAA+TGG | - | 42519:5316-5335 | MS.gene074631:intron | 40.0% | |
GAAGTTCTTTGGCAAAGAGA+GGG | + | 42519:3630-3649 | MS.gene074631:intergenic | 40.0% | |
GAATGTCTGACCCAATAAAC+CGG | + | 42519:5989-6008 | MS.gene074631:intergenic | 40.0% | |
GATACTCAGCCCTGAATATA+GGG | + | 42519:6210-6229 | MS.gene074631:intergenic | 40.0% | |
GCAAGGATTATTCCTTATGC+CGG | - | 42519:5349-5368 | MS.gene074631:intron | 40.0% | |
GCCTTTCCTAATGTTTGGAA+AGG | - | 42519:5418-5437 | MS.gene074631:intron | 40.0% | |
GTAGGACCTTTCCAAACATT+AGG | + | 42519:5427-5446 | MS.gene074631:intergenic | 40.0% | |
TAGAATTTCAAACCCGCGTA+TGG | + | 42519:5886-5905 | MS.gene074631:intergenic | 40.0% | |
TAGTCCACTTCATCTCTTGA+TGG | + | 42519:6388-6407 | MS.gene074631:intergenic | 40.0% | |
TATAAAGAGGGTGGCATTAG+AGG | - | 42519:5714-5733 | MS.gene074631:intron | 40.0% | |
TCGTCGTGTCAATTTGTGTT+TGG | + | 42519:4755-4774 | MS.gene074631:intergenic | 40.0% | |
TGACTAGGTTCAAAACCTTG+CGG | - | 42519:6112-6131 | MS.gene074631:intron | 40.0% | |
TGATACTCAGCCCTGAATAT+AGG | + | 42519:6211-6230 | MS.gene074631:intergenic | 40.0% | |
TGCAAGCCTTTCCTAATGTT+TGG | - | 42519:5413-5432 | MS.gene074631:intron | 40.0% | |
TGGCATTAGAGGTCTCTATA+GGG | - | 42519:5725-5744 | MS.gene074631:intron | 40.0% | |
TTTGCCAAAGAACTTCTTGC+TGG | - | 42519:3634-3653 | MS.gene074631:CDS | 40.0% | |
! | AAGAGGAGCAACAACAGTTT+TGG | + | 42519:3680-3699 | MS.gene074631:intergenic | 40.0% |
! | CAACCAAGTTGAATGTTTCC+GGG | - | 42519:5637-5656 | MS.gene074631:intron | 40.0% |
! | CCAACCAAGTTGAATGTTTC+CGG | - | 42519:5636-5655 | MS.gene074631:intron | 40.0% |
! | CTCATATCATTATCGGTGTC+CGG | + | 42519:3781-3800 | MS.gene074631:intergenic | 40.0% |
! | GACATAAGGTACCCTATTGT+AGG | - | 42519:4561-4580 | MS.gene074631:CDS | 40.0% |
! | GCATTAAGTACCGTATGGTA+CGG | - | 42519:4148-4167 | MS.gene074631:intron | 40.0% |
! | GGGAATATTCCAAAGAGTGT+TGG | + | 42519:5865-5884 | MS.gene074631:intergenic | 40.0% |
! | GTCGGATATCTGAGAAGTAT+CGG | - | 42519:4853-4872 | MS.gene074631:intron | 40.0% |
! | TACAGGCATTAAGTACCGTA+TGG | - | 42519:4143-4162 | MS.gene074631:intron | 40.0% |
! | TCGGACTAAGTTAGCTTATC+AGG | - | 42519:5516-5535 | MS.gene074631:intron | 40.0% |
! | TGCAGGTAACGTGCTTTATT+TGG | - | 42519:6040-6059 | MS.gene074631:intron | 40.0% |
! | TTTGGAATATTCCCATACGC+GGG | - | 42519:5871-5890 | MS.gene074631:intron | 40.0% |
!! | AATTCAGGTTGTTCCATCTG+CGG | - | 42519:6315-6334 | MS.gene074631:CDS | 40.0% |
!! | CTTTGGAATATTCCCATACG+CGG | - | 42519:5870-5889 | MS.gene074631:intron | 40.0% |
!! | GGTAACGTGCTTTATTTGGT+CGG | - | 42519:6044-6063 | MS.gene074631:intron | 40.0% |
!! | TGAAGCATTGACACTAGACA+CGG | - | 42519:4630-4649 | MS.gene074631:CDS | 40.0% |
!!! | CAGACATTTTTTGGTTCTCG+AGG | - | 42519:4110-4129 | MS.gene074631:intron | 40.0% |
ACCACCAGCAAGAAGTTCTT+TGG | + | 42519:3641-3660 | MS.gene074631:intergenic | 45.0% | |
ATCATGGCGAAACTCACATG+TGG | - | 42519:5955-5974 | MS.gene074631:intron | 45.0% | |
ATCCTCTTGAAGTTGTCAGG+AGG | - | 42519:6013-6032 | MS.gene074631:intron | 45.0% | |
CATCCCGGAAACATTCAACT+TGG | + | 42519:5643-5662 | MS.gene074631:intergenic | 45.0% | |
CCGGAAACATTCAACTTGGT+TGG | + | 42519:5639-5658 | MS.gene074631:intergenic | 45.0% | |
CGCTACGAAACTCAGTTCTT+CGG | + | 42519:5175-5194 | MS.gene074631:intergenic | 45.0% | |
CTAGGATAGACCGTACCATA+CGG | + | 42519:4161-4180 | MS.gene074631:intergenic | 45.0% | |
GATCATAGCAGCTACTAGCT+AGG | + | 42519:4179-4198 | MS.gene074631:intergenic | 45.0% | |
GCTACGAAACTCAGTTCTTC+GGG | + | 42519:5174-5193 | MS.gene074631:intergenic | 45.0% | |
GCTGGAAGACCCTATATTCA+GGG | - | 42519:6198-6217 | MS.gene074631:intron | 45.0% | |
GGCATTAGAGGTCTCTATAG+GGG | - | 42519:5726-5745 | MS.gene074631:intron | 45.0% | |
GGTCGGCTGGAAATTATAGA+TGG | - | 42519:6061-6080 | MS.gene074631:intron | 45.0% | |
GTGGCATTAGAGGTCTCTAT+AGG | - | 42519:5724-5743 | MS.gene074631:intron | 45.0% | |
GTGTAAGATTGCGCAAGTGT+GGG | - | 42519:5030-5049 | MS.gene074631:intron | 45.0% | |
TCAATATCAACGTGTCGTGC+TGG | + | 42519:4231-4250 | MS.gene074631:intergenic | 45.0% | |
TCTACCTGTAGAACCCCAAA+AGG | + | 42519:5241-5260 | MS.gene074631:intergenic | 45.0% | |
TCTTGTAATCCTCGGGTACA+TGG | + | 42519:5930-5949 | MS.gene074631:intergenic | 45.0% | |
TGATTGCTCAAAAGCAAGGC+TGG | - | 42519:6180-6199 | MS.gene074631:intron | 45.0% | |
TGTAAGATTGCGCAAGTGTG+GGG | - | 42519:5031-5050 | MS.gene074631:intron | 45.0% | |
TGTGTAAGATTGCGCAAGTG+TGG | - | 42519:5029-5048 | MS.gene074631:intron | 45.0% | |
! | AAGTGTGGGGAGATAATGGT+CGG | - | 42519:5044-5063 | MS.gene074631:intron | 45.0% |
! | ACGTCTTCCACAAGAAGTGT+CGG | - | 42519:4878-4897 | MS.gene074631:intron | 45.0% |
! | CAAGTTGAATGTTTCCGGGA+TGG | - | 42519:5641-5660 | MS.gene074631:intron | 45.0% |
! | CTCGAGGAAAGTACAGTTAC+AGG | - | 42519:4126-4145 | MS.gene074631:intron | 45.0% |
!! | GAAGCATTGACACTAGACAC+GGG | - | 42519:4631-4650 | MS.gene074631:intron | 45.0% |
!! | TTGTGTTGGTGTCATCGAGA+CGG | - | 42519:4294-4313 | MS.gene074631:CDS | 45.0% |
!!! | GCAAGGTTTTGAACCTAGTC+AGG | + | 42519:6113-6132 | MS.gene074631:intergenic | 45.0% |
AGAACTGAGTTTCGTAGCGC+AGG | - | 42519:5176-5195 | MS.gene074631:intron | 50.0% | |
AGAGGTCTCTATAGGGGAGT+AGG | - | 42519:5732-5751 | MS.gene074631:intron | 50.0% | |
AGGAGAATCGCCAAAACCGA+AGG | - | 42519:5215-5234 | MS.gene074631:intron | 50.0% | |
AGGGATGTGATCGAGTATGG+TGG | + | 42519:3611-3630 | MS.gene074631:intergenic | 50.0% | |
AGGTCCTACCCTTGACCTAA+TGG | - | 42519:5438-5457 | MS.gene074631:intron | 50.0% | |
AGTTGTCAGGAGGCAAATGC+AGG | - | 42519:6023-6042 | MS.gene074631:intron | 50.0% | |
CAGGACTGTCTGGATCAGTT+AGG | - | 42519:5195-5214 | MS.gene074631:intron | 50.0% | |
CTACCCTTGACCTAATGGCA+GGG | - | 42519:5443-5462 | MS.gene074631:intron | 50.0% | |
GAAACTCACATGTGGATCCG+TGG | - | 42519:5963-5982 | MS.gene074631:intron | 50.0% | |
GAAATGGAGCAAGTGTGGCA+AGG | - | 42519:5332-5351 | MS.gene074631:intron | 50.0% | |
GAGAGGGATGTGATCGAGTA+TGG | + | 42519:3614-3633 | MS.gene074631:intergenic | 50.0% | |
GCCAAAGAACTTCTTGCTGG+TGG | - | 42519:3637-3656 | MS.gene074631:CDS | 50.0% | |
GGCTGGAAGACCCTATATTC+AGG | - | 42519:6197-6216 | MS.gene074631:intron | 50.0% | |
GTAGAACCCCAAAAGGCCTT+CGG | + | 42519:5234-5253 | MS.gene074631:intergenic | 50.0% | |
GTCAATGCTGGACAACGACA+CGG | + | 42519:4829-4848 | MS.gene074631:intergenic | 50.0% | |
TATCCGACACGTGTCAATGC+TGG | + | 42519:4841-4860 | MS.gene074631:intergenic | 50.0% | |
TGACCCTGCCATTAGGTCAA+GGG | + | 42519:5449-5468 | MS.gene074631:intergenic | 50.0% | |
TGCCTCCTGACAACTTCAAG+AGG | + | 42519:6018-6037 | MS.gene074631:intergenic | 50.0% | |
! | CCAAAACCGAAGGCCTTTTG+GGG | - | 42519:5225-5244 | MS.gene074631:intron | 50.0% |
! | GCCAAAACCGAAGGCCTTTT+GGG | - | 42519:5224-5243 | MS.gene074631:intron | 50.0% |
! | TGTCGGTGCTTCGCGTAAAA+AGG | + | 42519:3752-3771 | MS.gene074631:intergenic | 50.0% |
!! | ACGTGCTTTATTTGGTCGGC+TGG | - | 42519:6048-6067 | MS.gene074631:intron | 50.0% |
!! | TCCAAAGAGTGTTGGAGCTG+TGG | + | 42519:5857-5876 | MS.gene074631:intergenic | 50.0% |
!! | TGTCCAGCATTGACACGTGT+CGG | - | 42519:4835-4854 | MS.gene074631:intron | 50.0% |
!!! | AAGGCCTTTTGGGGTTCTAC+AGG | - | 42519:5234-5253 | MS.gene074631:intron | 50.0% |
CAGAGAGTGACCCTGCCATT+AGG | + | 42519:5456-5475 | MS.gene074631:intergenic | 55.0% | |
CAGGGGAAATGGAGCAAGTG+TGG | - | 42519:5327-5346 | MS.gene074631:intron | 55.0% | |
CCTACCCTTGACCTAATGGC+AGG | - | 42519:5442-5461 | MS.gene074631:intron | 55.0% | |
CCTGCCATTAGGTCAAGGGT+AGG | + | 42519:5445-5464 | MS.gene074631:intergenic | 55.0% | |
CTAATGGCAGGGTCACTCTC+TGG | - | 42519:5454-5473 | MS.gene074631:intron | 55.0% | |
CTGACCCAATAAACCGGCCA+CGG | + | 42519:5983-6002 | MS.gene074631:intergenic | 55.0% | |
GCCACAGCTCCAACACTCTT+TGG | - | 42519:5853-5872 | MS.gene074631:intron | 55.0% | |
GCGCAAGTGTGGGGAGATAA+TGG | - | 42519:5040-5059 | MS.gene074631:intron | 55.0% | |
GTGACCCTGCCATTAGGTCA+AGG | + | 42519:5450-5469 | MS.gene074631:intergenic | 55.0% | |
GTTGTTCCATCTGCGGCCAT+TGG | - | 42519:6322-6341 | MS.gene074631:CDS | 55.0% | |
TTTCGTAGCGCAGGACTGTC+TGG | - | 42519:5185-5204 | MS.gene074631:intron | 55.0% | |
! | AATGAAGCGCCATGTACCCG+AGG | - | 42519:5918-5937 | MS.gene074631:intron | 55.0% |
! | CCCCAAAAGGCCTTCGGTTT+TGG | + | 42519:5228-5247 | MS.gene074631:intergenic | 55.0% |
! | CGCCAAAACCGAAGGCCTTT+TGG | - | 42519:5223-5242 | MS.gene074631:intron | 55.0% |
! | CTTCTTGCTGGTGGTCTTGC+TGG | - | 42519:3646-3665 | MS.gene074631:intron | 55.0% |
! | GGATCCGTGGCCGGTTTATT+GGG | - | 42519:5976-5995 | MS.gene074631:intron | 55.0% |
! | TGGATCCGTGGCCGGTTTAT+TGG | - | 42519:5975-5994 | MS.gene074631:intron | 55.0% |
!! | CGTAGCACCGACACTTCTTG+TGG | + | 42519:4888-4907 | MS.gene074631:intergenic | 55.0% |
ATGGCAGGGTCACTCTCTGG+AGG | - | 42519:5457-5476 | MS.gene074631:intron | 60.0% | |
CGGCTTCTTCAGATGCCGCA+AGG | + | 42519:6130-6149 | MS.gene074631:intergenic | 60.0% | |
CTCACATGTGGATCCGTGGC+CGG | - | 42519:5967-5986 | MS.gene074631:intron | 60.0% | |
GTGAAGCCAATGGCCGCAGA+TGG | + | 42519:6331-6350 | MS.gene074631:intergenic | 60.0% | |
TGGCAGGGTCACTCTCTGGA+GGG | - | 42519:5458-5477 | MS.gene074631:intron | 60.0% | |
! | AGGGTCACTCTCTGGAGGGA+CGG | - | 42519:5462-5481 | MS.gene074631:intron | 60.0% |
! | CTTGCTGGTGGTCTTGCTGG+TGG | - | 42519:3649-3668 | MS.gene074631:intron | 60.0% |
! | TCGGTGTCCGGTGTCTGTGT+CGG | + | 42519:3769-3788 | MS.gene074631:intergenic | 60.0% |
!! | CGAAGCACCGACACAGACAC+CGG | - | 42519:3759-3778 | MS.gene074631:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
42519 | gene | 3571 | 6408 | 3571 | ID=MS.gene074631 |
42519 | mRNA | 3571 | 6408 | 3571 | ID=MS.gene074631.t1;Parent=MS.gene074631 |
42519 | exon | 6256 | 6408 | 6256 | ID=MS.gene074631.t1.exon1;Parent=MS.gene074631.t1 |
42519 | CDS | 6256 | 6408 | 6256 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 4724 | 4809 | 4724 | ID=MS.gene074631.t1.exon2;Parent=MS.gene074631.t1 |
42519 | CDS | 4724 | 4809 | 4724 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 4442 | 4649 | 4442 | ID=MS.gene074631.t1.exon3;Parent=MS.gene074631.t1 |
42519 | CDS | 4442 | 4649 | 4442 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 4226 | 4352 | 4226 | ID=MS.gene074631.t1.exon4;Parent=MS.gene074631.t1 |
42519 | CDS | 4226 | 4352 | 4226 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 3935 | 4119 | 3935 | ID=MS.gene074631.t1.exon5;Parent=MS.gene074631.t1 |
42519 | CDS | 3935 | 4119 | 3935 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 3738 | 3860 | 3738 | ID=MS.gene074631.t1.exon6;Parent=MS.gene074631.t1 |
42519 | CDS | 3738 | 3860 | 3738 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
42519 | exon | 3571 | 3657 | 3571 | ID=MS.gene074631.t1.exon7;Parent=MS.gene074631.t1 |
42519 | CDS | 3571 | 3657 | 3571 | ID=cds.MS.gene074631.t1;Parent=MS.gene074631.t1 |
Gene Sequence |
Protein sequence |