Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031282.t1 | XP_003596576.1 | 92.7 | 872 | 52 | 4 | 1 | 872 | 1 | 860 | 0.00E+00 | 1291.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031282.t1 | Q94B77 | 66.6 | 473 | 149 | 5 | 400 | 870 | 435 | 900 | 7.6e-166 | 585.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031282.t1 | G7IHC9 | 92.7 | 872 | 52 | 4 | 1 | 872 | 1 | 860 | 0.0e+00 | 1291.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67474 | MS.gene031282 | PPI |
MS.gene012136 | MS.gene031282 | PPI |
MS.gene031282 | MS.gene64799 | PPI |
MS.gene031282 | MS.gene017610 | PPI |
MS.gene031282 | MS.gene28870 | PPI |
MS.gene031282 | MS.gene44220 | PPI |
MS.gene031282 | MS.gene59498 | PPI |
MS.gene031282 | MS.gene67475 | PPI |
MS.gene67709 | MS.gene031282 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031282.t1 | MTR_2g082190 | 95.766 | 496 | 19 | 1 | 367 | 862 | 357 | 850 | 0.0 | 953 |
MS.gene031282.t1 | MTR_4g081410 | 69.412 | 510 | 135 | 9 | 366 | 872 | 493 | 984 | 0.0 | 674 |
MS.gene031282.t1 | MTR_4g081410 | 46.939 | 147 | 64 | 2 | 8 | 154 | 1 | 133 | 4.52e-31 | 132 |
MS.gene031282.t1 | MTR_4g081410 | 69.412 | 510 | 135 | 9 | 366 | 872 | 499 | 990 | 0.0 | 674 |
MS.gene031282.t1 | MTR_4g081410 | 47.020 | 151 | 66 | 2 | 4 | 154 | 3 | 139 | 5.71e-33 | 137 |
MS.gene031282.t1 | MTR_4g045670 | 52.327 | 709 | 260 | 17 | 173 | 870 | 214 | 855 | 0.0 | 575 |
MS.gene031282.t1 | MTR_4g095780 | 45.652 | 506 | 217 | 13 | 384 | 871 | 389 | 854 | 3.48e-119 | 382 |
MS.gene031282.t1 | MTR_5g015690 | 49.765 | 426 | 194 | 7 | 394 | 812 | 452 | 864 | 8.94e-119 | 382 |
MS.gene031282.t1 | MTR_1g083260 | 47.268 | 421 | 203 | 8 | 407 | 821 | 497 | 904 | 3.95e-116 | 375 |
MS.gene031282.t1 | MTR_8g027995 | 48.792 | 414 | 194 | 7 | 405 | 812 | 624 | 1025 | 1.52e-113 | 372 |
MS.gene031282.t1 | MTR_4g087890 | 46.429 | 448 | 209 | 8 | 393 | 818 | 416 | 854 | 7.35e-113 | 366 |
MS.gene031282.t1 | MTR_7g080920 | 44.625 | 493 | 238 | 11 | 337 | 820 | 507 | 973 | 8.46e-106 | 350 |
MS.gene031282.t1 | MTR_3g078623 | 38.186 | 474 | 242 | 9 | 360 | 824 | 213 | 644 | 6.79e-82 | 278 |
MS.gene031282.t1 | MTR_5g036540 | 39.068 | 558 | 292 | 11 | 283 | 822 | 267 | 794 | 1.57e-81 | 280 |
MS.gene031282.t1 | MTR_8g062830 | 36.327 | 490 | 269 | 14 | 351 | 822 | 271 | 735 | 2.88e-77 | 266 |
MS.gene031282.t1 | MTR_1g013800 | 24.248 | 499 | 304 | 12 | 344 | 828 | 1318 | 1756 | 3.73e-31 | 132 |
MS.gene031282.t1 | MTR_5g026645 | 25.451 | 499 | 302 | 15 | 358 | 838 | 587 | 1033 | 1.49e-29 | 127 |
MS.gene031282.t1 | MTR_5g026645 | 25.451 | 499 | 302 | 15 | 358 | 838 | 746 | 1192 | 1.81e-29 | 127 |
MS.gene031282.t1 | MTR_5g026645 | 25.451 | 499 | 302 | 15 | 358 | 838 | 761 | 1207 | 1.82e-29 | 127 |
MS.gene031282.t1 | MTR_4g131020 | 23.762 | 505 | 304 | 13 | 375 | 850 | 741 | 1193 | 5.70e-28 | 122 |
MS.gene031282.t1 | MTR_4g109040 | 25.127 | 394 | 231 | 12 | 405 | 782 | 834 | 1179 | 9.81e-28 | 121 |
MS.gene031282.t1 | MTR_4g109040 | 25.127 | 394 | 231 | 12 | 405 | 782 | 1168 | 1513 | 3.18e-27 | 120 |
MS.gene031282.t1 | MTR_4g131020 | 26.510 | 298 | 190 | 8 | 375 | 645 | 741 | 1036 | 1.86e-26 | 117 |
MS.gene031282.t1 | MTR_3g037080 | 25.984 | 254 | 174 | 6 | 403 | 645 | 1504 | 1754 | 1.39e-22 | 105 |
MS.gene031282.t1 | MTR_0094s0010 | 38.750 | 80 | 46 | 2 | 745 | 821 | 4 | 83 | 2.74e-13 | 66.6 |
MS.gene031282.t1 | MTR_0094s0010 | 39.474 | 76 | 43 | 2 | 749 | 821 | 2 | 77 | 7.86e-13 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031282.t1 | AT5G54650 | 66.879 | 471 | 147 | 5 | 402 | 870 | 437 | 900 | 0.0 | 605 |
MS.gene031282.t1 | AT5G54650 | 66.879 | 471 | 147 | 5 | 402 | 870 | 437 | 900 | 0.0 | 605 |
MS.gene031282.t1 | AT5G67470 | 50.476 | 420 | 182 | 6 | 398 | 813 | 452 | 849 | 5.11e-121 | 388 |
MS.gene031282.t1 | AT3G25500 | 48.131 | 428 | 197 | 7 | 392 | 812 | 582 | 991 | 2.28e-116 | 380 |
MS.gene031282.t1 | AT3G05470 | 47.765 | 425 | 197 | 8 | 407 | 821 | 470 | 879 | 4.64e-115 | 372 |
MS.gene031282.t1 | AT2G43800 | 46.604 | 427 | 209 | 7 | 398 | 818 | 438 | 851 | 2.57e-113 | 368 |
MS.gene031282.t1 | AT1G70140 | 41.935 | 434 | 229 | 9 | 394 | 814 | 292 | 715 | 1.86e-89 | 300 |
MS.gene031282.t1 | AT1G59910 | 39.952 | 418 | 235 | 7 | 402 | 812 | 457 | 865 | 1.26e-83 | 288 |
MS.gene031282.t1 | AT5G48360 | 38.084 | 407 | 197 | 9 | 415 | 812 | 420 | 780 | 1.08e-67 | 241 |
MS.gene031282.t1 | AT3G07540 | 32.319 | 427 | 218 | 10 | 398 | 813 | 469 | 835 | 7.06e-47 | 181 |
MS.gene031282.t1 | AT1G24150 | 42.925 | 212 | 116 | 3 | 405 | 613 | 310 | 519 | 1.23e-45 | 172 |
MS.gene031282.t1 | AT1G31810 | 27.891 | 294 | 191 | 6 | 371 | 647 | 774 | 1063 | 1.07e-28 | 124 |
MS.gene031282.t1 | AT1G31810 | 27.891 | 294 | 191 | 6 | 371 | 647 | 774 | 1063 | 1.07e-28 | 124 |
MS.gene031282.t1 | AT5G07740 | 29.134 | 254 | 171 | 5 | 399 | 645 | 1216 | 1467 | 1.56e-28 | 124 |
MS.gene031282.t1 | AT5G07740 | 29.134 | 254 | 171 | 5 | 399 | 645 | 1238 | 1489 | 1.96e-28 | 124 |
MS.gene031282.t1 | AT5G07740 | 27.055 | 292 | 162 | 8 | 399 | 645 | 1238 | 1523 | 1.88e-24 | 111 |
MS.gene031282.t1 | AT2G25050 | 24.643 | 280 | 178 | 5 | 398 | 645 | 735 | 1013 | 7.00e-22 | 102 |
MS.gene031282.t1 | AT5G07770 | 26.000 | 300 | 192 | 9 | 403 | 691 | 194 | 474 | 1.65e-19 | 94.4 |
MS.gene031282.t1 | AT5G07770 | 26.000 | 300 | 192 | 9 | 403 | 691 | 187 | 467 | 1.67e-19 | 94.4 |
MS.gene031282.t1 | AT5G07770 | 25.498 | 251 | 167 | 5 | 403 | 645 | 53 | 291 | 4.24e-19 | 92.8 |
MS.gene031282.t1 | AT5G07770 | 28.000 | 175 | 124 | 1 | 473 | 645 | 224 | 398 | 4.22e-18 | 89.7 |
MS.gene031282.t1 | AT3G32400 | 25.562 | 356 | 228 | 7 | 299 | 645 | 13 | 340 | 9.52e-18 | 87.8 |
MS.gene031282.t1 | AT5G07760 | 23.569 | 297 | 179 | 6 | 473 | 764 | 523 | 776 | 1.27e-16 | 85.5 |
MS.gene031282.t1 | AT5G07760 | 23.569 | 297 | 179 | 6 | 473 | 764 | 523 | 776 | 1.81e-16 | 84.7 |
MS.gene031282.t1 | AT5G07650 | 25.238 | 210 | 154 | 2 | 438 | 645 | 435 | 643 | 2.25e-16 | 84.3 |
MS.gene031282.t1 | AT5G07650 | 23.077 | 234 | 153 | 3 | 438 | 645 | 435 | 667 | 1.25e-12 | 72.4 |
MS.gene031282.t1 | AT5G07780 | 26.136 | 176 | 127 | 2 | 473 | 645 | 144 | 319 | 2.16e-12 | 70.9 |
MS.gene031282.t1 | AT3G25493 | 34.831 | 89 | 47 | 2 | 746 | 823 | 45 | 133 | 8.99e-12 | 64.7 |
MS.gene031282.t1 | AT3G32400 | 24.791 | 359 | 225 | 8 | 299 | 640 | 5 | 335 | 1.25e-11 | 68.6 |
Find 183 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGAAGATTTGATTCATTTA+AGG | 0.185162 | 2.1:+18371779 | MS.gene031282:CDS |
TTATCTTGTTTCACATTCTT+TGG | 0.186776 | 2.1:-18375623 | None:intergenic |
GGTAATAATTCAACAGTATA+TGG | 0.204014 | 2.1:+18370779 | MS.gene031282:CDS |
TTCTTTGGTGTTGGTTTCTT+TGG | 0.209468 | 2.1:-18375608 | None:intergenic |
CCCTACCAGGTGGAGGTTTA+AGG | 0.228982 | 2.1:-18372855 | None:intergenic |
TCCACCACCACCAGCGAAAC+CGG | 0.283636 | 2.1:+18373110 | MS.gene031282:CDS |
ATTCATTTAAGGAAAGATAT+TGG | 0.294417 | 2.1:+18371790 | MS.gene031282:CDS |
AGGAAAGATATTGGAGATCT+TGG | 0.307252 | 2.1:+18371799 | MS.gene031282:CDS |
CTTGAAGCTGTTCTTAAAAC+AGG | 0.312564 | 2.1:+18374951 | MS.gene031282:CDS |
CAGATGCAGGATCAAATAAT+TGG | 0.319812 | 2.1:-18370899 | None:intergenic |
CTAAAACTATCTGATGTAAA+AGG | 0.323915 | 2.1:+18375035 | MS.gene031282:CDS |
GAATCTCAACCAGAGATTTC+AGG | 0.325755 | 2.1:-18374468 | None:intergenic |
ATCAGGGTTTGAAGGAATTC+TGG | 0.333997 | 2.1:-18374361 | None:intergenic |
TGATCCTGCATCTGGACTAT+TGG | 0.336989 | 2.1:+18370908 | MS.gene031282:CDS |
GGACCACCATTTCCAGGTTT+CGG | 0.341832 | 2.1:-18373078 | None:intergenic |
TTAGATGCTGATGGTTTAAC+AGG | 0.343190 | 2.1:+18375287 | MS.gene031282:CDS |
GATTTCTGAGCTAATTTCAT+TGG | 0.344293 | 2.1:-18371854 | None:intergenic |
AAGTTGGTGCCATCTTCATC+AGG | 0.344509 | 2.1:-18374378 | None:intergenic |
CTGCTAGGCGTTTCTATTCC+AGG | 0.348931 | 2.1:-18372997 | None:intergenic |
AACAATTTAGACGGTGATAA+GGG | 0.352857 | 2.1:+18375374 | MS.gene031282:CDS |
TTAAATGAATCAAATCTTCC+TGG | 0.358062 | 2.1:-18371777 | None:intergenic |
CTAAAGGTCTAAGACCCTTT+TGG | 0.362464 | 2.1:-18373191 | None:intergenic |
TCCATTCGTTTAAAAGCAAA+TGG | 0.362540 | 2.1:-18374490 | None:intergenic |
CTTTCTTTGAGTCAATGATT+TGG | 0.362650 | 2.1:-18373701 | None:intergenic |
CTCGTTCCAGGTTGCTAGTA+AGG | 0.363942 | 2.1:+18374896 | MS.gene031282:intron |
GGTGGTGGTGGAGGAGGCTT+AGG | 0.364325 | 2.1:-18373099 | None:intergenic |
CTCAACTTGGTCCGGCTGAT+CGG | 0.365990 | 2.1:+18374443 | MS.gene031282:CDS |
GTGCTACTTGGTGATTCCTT+TGG | 0.369035 | 2.1:-18371832 | None:intergenic |
GGCTTAGGACCACCATTTCC+AGG | 0.376836 | 2.1:-18373084 | None:intergenic |
TCATGTTTCGCCTCGACACT+TGG | 0.379415 | 2.1:+18372008 | MS.gene031282:CDS |
GGAGCTCTTACACCGCTCTT+AGG | 0.381661 | 2.1:-18373156 | None:intergenic |
TGTTTCCAGCAGTGGTAGAT+AGG | 0.389487 | 2.1:+18375720 | MS.gene031282:CDS |
AACATGACGTAGATATCTTC+TGG | 0.391536 | 2.1:-18371992 | None:intergenic |
CCAGGTTTCGGTGGTGGAGG+TGG | 0.391590 | 2.1:-18373066 | None:intergenic |
CCCGGTTTCGCTGGTGGTGG+TGG | 0.391977 | 2.1:-18373111 | None:intergenic |
TGTTTCACATTCTTTGGTGT+TGG | 0.393924 | 2.1:-18375617 | None:intergenic |
TTCGCTGGTGGTGGTGGAGG+AGG | 0.395840 | 2.1:-18373105 | None:intergenic |
TTTCTTAATAATGTTGGATA+AGG | 0.396902 | 2.1:+18375562 | MS.gene031282:CDS |
ATGCTCGACAAAACCCTTAA+CGG | 0.400671 | 2.1:-18375408 | None:intergenic |
GAAATGTTCCATCGTTCATT+CGG | 0.402919 | 2.1:-18374977 | None:intergenic |
GGAGGTGGAGGTGGCGGAGG+AGG | 0.403020 | 2.1:-18372976 | None:intergenic |
TCTGATGTAAAAGGAGTAGA+TGG | 0.403720 | 2.1:+18375044 | MS.gene031282:CDS |
CCATTTCCAGGTTTCGGTGG+TGG | 0.406813 | 2.1:-18373072 | None:intergenic |
CCTCCGCCACCTCCACCTCC+TGG | 0.407674 | 2.1:+18372979 | MS.gene031282:CDS |
CAATTATTTGATCCTGCATC+TGG | 0.409126 | 2.1:+18370900 | MS.gene031282:CDS |
AGCAAACTCAGATCAAACTA+TGG | 0.409718 | 2.1:+18373314 | MS.gene031282:CDS |
CTAATTTCATTGGTGCTACT+TGG | 0.411514 | 2.1:-18371844 | None:intergenic |
GTAAGAGCTCCTCCGCCATT+TGG | 0.411749 | 2.1:+18373168 | MS.gene031282:CDS |
TCGGGCTGCTCTTAATCCTT+CGG | 0.418787 | 2.1:-18375111 | None:intergenic |
TCCTCCGCCATTTGGCCAAA+AGG | 0.421543 | 2.1:+18373176 | MS.gene031282:CDS |
AGTGGTGGTCTTTCTCAACT+TGG | 0.421583 | 2.1:+18374430 | MS.gene031282:CDS |
ACTCAGATCAAACTATGGTT+TGG | 0.427166 | 2.1:+18373319 | MS.gene031282:CDS |
TTCGGTGGTGGAGGTGGAGG+AGG | 0.428489 | 2.1:-18373060 | None:intergenic |
GTTCGTGATGCACTACTTGA+AGG | 0.431387 | 2.1:+18373774 | MS.gene031282:CDS |
CCACCTCCACCACCGAAACC+TGG | 0.433893 | 2.1:+18373066 | MS.gene031282:CDS |
GTTCAAGAAAAGGCTGTTGT+TGG | 0.435872 | 2.1:+18373228 | MS.gene031282:CDS |
GGTTTCGGTGGTGGAGGTGG+AGG | 0.443619 | 2.1:-18373063 | None:intergenic |
GGCGTTTCTATTCCAGGAGG+TGG | 0.445753 | 2.1:-18372991 | None:intergenic |
GAACAATTTAGACGGTGATA+AGG | 0.447793 | 2.1:+18375373 | MS.gene031282:CDS |
TTAAGGTCAAATGATGGTCT+TGG | 0.450871 | 2.1:-18372838 | None:intergenic |
ACGTGATTTCTTAATAATGT+TGG | 0.452407 | 2.1:+18375556 | MS.gene031282:CDS |
CGGCGGTGGACGATGAGTTT+CGG | 0.452994 | 2.1:-18375678 | None:intergenic |
CAGGTTTAATGAAGAAATGA+TGG | 0.453857 | 2.1:+18373590 | MS.gene031282:intron |
GGTTTCGCTGGTGGTGGTGG+AGG | 0.455786 | 2.1:-18373108 | None:intergenic |
CCACCACCGAAACCTGGAAA+TGG | 0.460099 | 2.1:+18373072 | MS.gene031282:CDS |
CGAGGACCACCCGGTTTCGC+TGG | 0.464139 | 2.1:-18373120 | None:intergenic |
GATGCTATGGATTACTTGCC+AGG | 0.464809 | 2.1:+18371759 | MS.gene031282:CDS |
ATTCCAGGAGGTGGAGGTGG+CGG | 0.472699 | 2.1:-18372982 | None:intergenic |
GACTTCAGGCAGAGATGCTA+TGG | 0.474236 | 2.1:+18371746 | MS.gene031282:intron |
CCTCCGCCATTTGGCCAAAA+GGG | 0.475426 | 2.1:+18373177 | MS.gene031282:CDS |
CTGCTCTTAATCCTTCGGTT+CGG | 0.475915 | 2.1:-18375106 | None:intergenic |
CCAGGAGGTGGAGGTGGCGG+AGG | 0.476374 | 2.1:-18372979 | None:intergenic |
CAACTTGAAGACCGAGTTCG+CGG | 0.477053 | 2.1:-18375217 | None:intergenic |
TTTAGTTCTTCCTCTGAAGT+TGG | 0.477874 | 2.1:-18374394 | None:intergenic |
AGGTGGCGGAGGAGGATTAA+CGG | 0.478748 | 2.1:-18372968 | None:intergenic |
TTAGGAGGCGGTGGTGGACG+AGG | 0.481125 | 2.1:-18373138 | None:intergenic |
TGATCGGTTCCTGAAATCTC+TGG | 0.484368 | 2.1:+18374459 | MS.gene031282:CDS |
CTTCCAGGAGGAGGTTTCAA+AGG | 0.484558 | 2.1:-18372895 | None:intergenic |
CCACCTGGTAGGGTAGGAAA+TGG | 0.494357 | 2.1:+18372865 | MS.gene031282:CDS |
GGACCGCCACCACTAGGCTT+CGG | 0.495368 | 2.1:-18373039 | None:intergenic |
GGGAGTGCAGGAAGAGATGA+AGG | 0.497222 | 2.1:+18375512 | MS.gene031282:CDS |
CTAAAGTTGCAAAAGACTCT+CGG | 0.498477 | 2.1:-18374558 | None:intergenic |
CCGCTCTTAGGAGGCGGTGG+TGG | 0.499420 | 2.1:-18373144 | None:intergenic |
TCTATTCCAGGAGGTGGAGG+TGG | 0.499801 | 2.1:-18372985 | None:intergenic |
CCATCTTCATCAGGGTTTGA+AGG | 0.502258 | 2.1:-18374369 | None:intergenic |
ACTCTCCTATCTACCACTGC+TGG | 0.504037 | 2.1:-18375725 | None:intergenic |
TGTTGTAGATGTTGTGGAAG+TGG | 0.507308 | 2.1:+18372162 | MS.gene031282:CDS |
TTTCCAGGTTTCGGTGGTGG+AGG | 0.508336 | 2.1:-18373069 | None:intergenic |
TGGTCTTTCTCAACTTGGTC+CGG | 0.510316 | 2.1:+18374435 | MS.gene031282:CDS |
CAAGATTAATGTCTTCAAGA+AGG | 0.514869 | 2.1:-18375178 | None:intergenic |
CCTTCAAACCCTGATGAAGA+TGG | 0.518374 | 2.1:+18374369 | MS.gene031282:CDS |
AAGGCTGTTGTTGGTTCAGA+AGG | 0.518631 | 2.1:+18373237 | MS.gene031282:CDS |
GAAAGAGGATCAGATCTTCC+AGG | 0.520401 | 2.1:-18372910 | None:intergenic |
GAAGATCATTACCGCGAACT+CGG | 0.521402 | 2.1:+18375206 | MS.gene031282:CDS |
TAAAGTTGCAAAAGACTCTC+GGG | 0.521682 | 2.1:-18374557 | None:intergenic |
TGGATCAAAAGTTCAAGAAA+AGG | 0.521862 | 2.1:+18373218 | MS.gene031282:CDS |
GTTTCTATTCCAGGAGGTGG+AGG | 0.522144 | 2.1:-18372988 | None:intergenic |
CCACCACCACCAGCGAAACC+GGG | 0.527329 | 2.1:+18373111 | MS.gene031282:CDS |
TGAGCGATTGTTTCCAGCAG+TGG | 0.527953 | 2.1:+18375712 | MS.gene031282:CDS |
CACCAATGCAGTTATAGCTA+TGG | 0.527972 | 2.1:-18372106 | None:intergenic |
AGCAAGAGTGATTACTCTGT+TGG | 0.530075 | 2.1:+18372225 | MS.gene031282:CDS |
ACAGGAACAACAGCTAGATT+AGG | 0.531477 | 2.1:+18375305 | MS.gene031282:CDS |
TGGACTATTGGATGAGGATA+CGG | 0.531729 | 2.1:+18370920 | MS.gene031282:CDS |
GCTCCGAAGCCTAGTGGTGG+CGG | 0.532512 | 2.1:+18373036 | MS.gene031282:CDS |
ATGGCTCTTGTGAAGAGTAC+TGG | 0.533568 | 2.1:+18375476 | MS.gene031282:CDS |
GTAATAATTCAACAGTATAT+GGG | 0.533992 | 2.1:+18370780 | MS.gene031282:CDS |
GGATCAGATCTTCCAGGAGG+AGG | 0.534869 | 2.1:-18372904 | None:intergenic |
AATGTCTTCAAGAAGGTCCT+CGG | 0.535036 | 2.1:-18375171 | None:intergenic |
GATTTCAGGAACCGATCAGC+CGG | 0.536024 | 2.1:-18374454 | None:intergenic |
CCACCCGGTTTCGCTGGTGG+TGG | 0.536669 | 2.1:-18373114 | None:intergenic |
ACCTTAAACCTCCACCTGGT+AGG | 0.544175 | 2.1:+18372854 | MS.gene031282:CDS |
CCTCCTTTGAAACCTCCTCC+TGG | 0.545221 | 2.1:+18372892 | MS.gene031282:CDS |
CCTTAAACCTCCACCTGGTA+GGG | 0.547105 | 2.1:+18372855 | MS.gene031282:CDS |
ATGAACGATGGAACATTTCG+AGG | 0.547179 | 2.1:+18374981 | MS.gene031282:CDS |
CTCTTGCTCATGCTGAGAAG+TGG | 0.550094 | 2.1:-18372210 | None:intergenic |
AAACGATGCTTATGTGGGAT+CGG | 0.551160 | 2.1:+18371963 | MS.gene031282:CDS |
ATACCATTTCCTACCCTACC+AGG | 0.554843 | 2.1:-18372868 | None:intergenic |
TTACATGACTACTCTTCAAG+AGG | 0.554868 | 2.1:+18374522 | MS.gene031282:CDS |
TTATGTTGTTGTAGATGTTG+TGG | 0.556852 | 2.1:+18372156 | MS.gene031282:CDS |
ACACCGCTCTTAGGAGGCGG+TGG | 0.557794 | 2.1:-18373147 | None:intergenic |
GAACAGCTTCAAGAAGCTTG+AGG | 0.558395 | 2.1:-18374941 | None:intergenic |
AGAAGAAGAGAAGAAAATCA+TGG | 0.559378 | 2.1:+18375457 | MS.gene031282:CDS |
GTTTGGAATCAACTCAAAGC+AGG | 0.561607 | 2.1:+18373336 | MS.gene031282:CDS |
CCACTAGGCTTCGGAGCGGG+AGG | 0.563638 | 2.1:-18373030 | None:intergenic |
CCACCATTTCCAGGTTTCGG+TGG | 0.564202 | 2.1:-18373075 | None:intergenic |
TCATCCAATAGTCCAGATGC+AGG | 0.565151 | 2.1:-18370912 | None:intergenic |
CCACCACTAGGCTTCGGAGC+GGG | 0.565794 | 2.1:-18373033 | None:intergenic |
TTTCCTACCCTACCAGGTGG+AGG | 0.566961 | 2.1:-18372862 | None:intergenic |
AAGGGTCTTAGACCTTTAGC+TGG | 0.567388 | 2.1:+18373195 | MS.gene031282:CDS |
GACTGTGGTTCAGTTGAAAG+AGG | 0.567395 | 2.1:-18372925 | None:intergenic |
AAAGATACTGCTAGTTCTAG+AGG | 0.569240 | 2.1:+18375644 | MS.gene031282:CDS |
GGAGGAGGACCGCCACCACT+AGG | 0.571983 | 2.1:-18373045 | None:intergenic |
TGCCATAGCTATAACTGCAT+TGG | 0.572156 | 2.1:+18372104 | MS.gene031282:CDS |
GCTCTTACACCGCTCTTAGG+AGG | 0.577184 | 2.1:-18373153 | None:intergenic |
TGCATCTGGACTATTGGATG+AGG | 0.577696 | 2.1:+18370914 | MS.gene031282:CDS |
GGACCACCCGGTTTCGCTGG+TGG | 0.583166 | 2.1:-18373117 | None:intergenic |
AGTTGGTGCCATCTTCATCA+GGG | 0.583828 | 2.1:-18374377 | None:intergenic |
GGTCTTAGACCTTTAGCTGG+TGG | 0.583933 | 2.1:+18373198 | MS.gene031282:CDS |
CAACAGAATGATAAAATCAA+AGG | 0.588922 | 2.1:+18373633 | MS.gene031282:CDS |
TCACGAAAATCTGACGGCGG+TGG | 0.592131 | 2.1:-18375692 | None:intergenic |
AAACCTCCACCTGGTAGGGT+AGG | 0.593948 | 2.1:+18372859 | MS.gene031282:CDS |
GGAGGAATGACACCACTGCT+AGG | 0.596488 | 2.1:-18373012 | None:intergenic |
CTTACACCGCTCTTAGGAGG+CGG | 0.599991 | 2.1:-18373150 | None:intergenic |
CCAGGAGGAGGTTTCAAAGG+AGG | 0.600070 | 2.1:-18372892 | None:intergenic |
CAGAATGATAAAATCAAAGG+TGG | 0.603431 | 2.1:+18373636 | MS.gene031282:CDS |
CCCGCTCCGAAGCCTAGTGG+TGG | 0.604589 | 2.1:+18373033 | MS.gene031282:CDS |
ACAATTTAGACGGTGATAAG+GGG | 0.606059 | 2.1:+18375375 | MS.gene031282:CDS |
GCAGCAGCATTAGATGCTGA+TGG | 0.606061 | 2.1:+18375278 | MS.gene031282:CDS |
ATACTGAGGTGTATCACGTA+AGG | 0.606224 | 2.1:-18373676 | None:intergenic |
AGGGTTTGAAGGAATTCTGG+TGG | 0.608476 | 2.1:-18374358 | None:intergenic |
CCTCCCGCTCCGAAGCCTAG+TGG | 0.609319 | 2.1:+18373030 | MS.gene031282:CDS |
GAAGATGGCACCAACTTCAG+AGG | 0.610054 | 2.1:+18374384 | MS.gene031282:CDS |
CCACCGAAACCTGGAAATGG+TGG | 0.613467 | 2.1:+18373075 | MS.gene031282:CDS |
CATGTTTCGCCTCGACACTT+GGG | 0.614612 | 2.1:+18372009 | MS.gene031282:CDS |
TTCAGACGATGACAGTCCAT+AGG | 0.616390 | 2.1:+18375760 | MS.gene031282:CDS |
AGATTTCATAAACAAAGAGA+TGG | 0.619315 | 2.1:+18375349 | MS.gene031282:CDS |
GGAGGTTTAAGGTCAAATGA+TGG | 0.621513 | 2.1:-18372844 | None:intergenic |
GGGTTTGAAGGAATTCTGGT+GGG | 0.622489 | 2.1:-18374357 | None:intergenic |
TCAGAAGTCTTAACTGACTG+TGG | 0.622598 | 2.1:-18372940 | None:intergenic |
GGAATAGAAACGCCTAGCAG+TGG | 0.622924 | 2.1:+18373000 | MS.gene031282:CDS |
GAGTTAGACAAACTGATGAA+AGG | 0.628143 | 2.1:+18372187 | MS.gene031282:CDS |
CAAGAGATAATCCGAACCGA+AGG | 0.628886 | 2.1:+18375095 | MS.gene031282:CDS |
TCTTGGCTTATGCATACCAA+AGG | 0.634402 | 2.1:+18371816 | MS.gene031282:CDS |
CCACCACCGCCTCCTAAGAG+CGG | 0.634412 | 2.1:+18373144 | MS.gene031282:CDS |
TCACTAAATGAGGAGAAACA+TGG | 0.637364 | 2.1:+18372754 | MS.gene031282:CDS |
GGTGGTGGACGAGGACCACC+CGG | 0.645287 | 2.1:-18373129 | None:intergenic |
AGCAGTGGTAGATAGGAGAG+TGG | 0.648892 | 2.1:+18375727 | MS.gene031282:CDS |
ACAGGAAACCGAATGAACGA+TGG | 0.649015 | 2.1:+18374969 | MS.gene031282:CDS |
GTTGTTGGTTCAGAAGGTGA+AGG | 0.650438 | 2.1:+18373243 | MS.gene031282:CDS |
ACAACAGCTAGATTAGGCCA+TGG | 0.652796 | 2.1:+18375311 | MS.gene031282:CDS |
TATAAGCATTGAAGAACACA+AGG | 0.662657 | 2.1:+18370854 | MS.gene031282:CDS |
GAGATGGCGAACAATTTAGA+CGG | 0.672384 | 2.1:+18375365 | MS.gene031282:CDS |
AATCGCTCACGAAAATCTGA+CGG | 0.676155 | 2.1:-18375698 | None:intergenic |
TTTGACCTTAAACCTCCACC+TGG | 0.677794 | 2.1:+18372850 | MS.gene031282:CDS |
CCACCACCAGCGAAACCGGG+TGG | 0.696337 | 2.1:+18373114 | MS.gene031282:CDS |
AACGATGGAACATTTCGAGG+AGG | 0.696651 | 2.1:+18374984 | MS.gene031282:CDS |
CTAGGCGTTTCTATTCCAGG+AGG | 0.705891 | 2.1:-18372994 | None:intergenic |
CGCTCACGAAAATCTGACGG+CGG | 0.706177 | 2.1:-18375695 | None:intergenic |
CCATTTCCTACCCTACCAGG+TGG | 0.712946 | 2.1:-18372865 | None:intergenic |
GCCACCACTAGGCTTCGGAG+CGG | 0.720213 | 2.1:-18373034 | None:intergenic |
GGAGTGCAGGAAGAGATGAA+GGG | 0.730427 | 2.1:+18375513 | MS.gene031282:CDS |
AGAGGATCAGATCTTCCAGG+AGG | 0.737639 | 2.1:-18372907 | None:intergenic |
TCAATGATTTGGATATACTG+AGG | 0.769854 | 2.1:-18373690 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAGTACTATTTTAATTAAAA+AGG | - | chr2.1:18373390-18373409 | None:intergenic | 10.0% |
!! | AAGTATATGAAATTAATTCT+AGG | - | chr2.1:18373937-18373956 | None:intergenic | 15.0% |
!! | CTGATATTATCTTAAAATTT+GGG | + | chr2.1:18371183-18371202 | MS.gene031282:intron | 15.0% |
!! | TCTGATATTATCTTAAAATT+TGG | + | chr2.1:18371182-18371201 | MS.gene031282:intron | 15.0% |
!!! | TAAATTTTCCTCAAATATTT+TGG | - | chr2.1:18370991-18371010 | None:intergenic | 15.0% |
!!! | TGTCATTGATAATAATTTAA+TGG | - | chr2.1:18374140-18374159 | None:intergenic | 15.0% |
!! | ACTTTAACAATAATTACATG+AGG | - | chr2.1:18371643-18371662 | None:intergenic | 20.0% |
!! | AGATGAATAATAATTTACCA+TGG | + | chr2.1:18373522-18373541 | MS.gene031282:intron | 20.0% |
!! | ATTCATTTAAGGAAAGATAT+TGG | + | chr2.1:18371790-18371809 | MS.gene031282:CDS | 20.0% |
!! | ATTTGTGGATTTAAAAATTG+AGG | + | chr2.1:18372598-18372617 | MS.gene031282:intron | 20.0% |
!! | GTAATAATTCAACAGTATAT+GGG | + | chr2.1:18370780-18370799 | MS.gene031282:CDS | 20.0% |
!! | TAAATAAAAAGAGTTAAGCA+CGG | - | chr2.1:18374842-18374861 | None:intergenic | 20.0% |
!! | TACATATGAATGATTTCATA+TGG | + | chr2.1:18371519-18371538 | MS.gene031282:intron | 20.0% |
!! | TATTATCTTAAAATTTGGGT+TGG | + | chr2.1:18371187-18371206 | MS.gene031282:intron | 20.0% |
!! | TTATCAAAATGAAAACCAAT+TGG | + | chr2.1:18374859-18374878 | MS.gene031282:intron | 20.0% |
!! | TTCAAAAAATTCACTAAATG+AGG | + | chr2.1:18372744-18372763 | MS.gene031282:CDS | 20.0% |
!! | TTTCTTAATAATGTTGGATA+AGG | + | chr2.1:18375562-18375581 | MS.gene031282:CDS | 20.0% |
!! | TTTGTGGATTTAAAAATTGA+GGG | + | chr2.1:18372599-18372618 | MS.gene031282:intron | 20.0% |
!!! | ATTTTTCACATTCACAATTT+CGG | + | chr2.1:18372332-18372351 | MS.gene031282:intron | 20.0% |
!!! | CATTTAGTGAATTTTTTGAA+GGG | - | chr2.1:18372744-18372763 | None:intergenic | 20.0% |
!!! | CTTTTTAATGCTATGTTATA+GGG | + | chr2.1:18372285-18372304 | MS.gene031282:intron | 20.0% |
!!! | GTCACATATTTTAAAATTTG+AGG | + | chr2.1:18372569-18372588 | MS.gene031282:intron | 20.0% |
!!! | TAAGTTAAAGCCTTTTTTTT+GGG | + | chr2.1:18373281-18373300 | MS.gene031282:CDS | 20.0% |
!!! | TCATTTAGTGAATTTTTTGA+AGG | - | chr2.1:18372745-18372764 | None:intergenic | 20.0% |
! | AATAATAATTTACCATGGCT+AGG | + | chr2.1:18373527-18373546 | MS.gene031282:intron | 25.0% |
! | AATATTTAGTTATAGGTGTG+AGG | - | chr2.1:18371107-18371126 | None:intergenic | 25.0% |
! | AATTGAAGTGTGATATGATA+TGG | + | chr2.1:18371280-18371299 | MS.gene031282:intron | 25.0% |
! | AATTTGAGGAAACAAATTTG+TGG | + | chr2.1:18372583-18372602 | MS.gene031282:intron | 25.0% |
! | ACGTGATTTCTTAATAATGT+TGG | + | chr2.1:18375556-18375575 | MS.gene031282:CDS | 25.0% |
! | AGAGCCTATTCAAAATATAT+TGG | - | chr2.1:18371326-18371345 | None:intergenic | 25.0% |
! | AGATATCTCTCATATAATGT+GGG | + | chr2.1:18371407-18371426 | MS.gene031282:intron | 25.0% |
! | AGATTTCATAAACAAAGAGA+TGG | + | chr2.1:18375349-18375368 | MS.gene031282:CDS | 25.0% |
! | AGGAAGATTTGATTCATTTA+AGG | + | chr2.1:18371779-18371798 | MS.gene031282:CDS | 25.0% |
! | AGTTGTAAATACGGAAAAAT+AGG | + | chr2.1:18372627-18372646 | MS.gene031282:intron | 25.0% |
! | ATATAACACTTTATATGGCT+AGG | + | chr2.1:18371431-18371450 | MS.gene031282:intron | 25.0% |
! | ATATTTAGTTATAGGTGTGA+GGG | - | chr2.1:18371106-18371125 | None:intergenic | 25.0% |
! | ATTGAAGTGTGATATGATAT+GGG | + | chr2.1:18371281-18371300 | MS.gene031282:intron | 25.0% |
! | CAACAGAATGATAAAATCAA+AGG | + | chr2.1:18373633-18373652 | MS.gene031282:CDS | 25.0% |
! | CACACCTATAACTAAATATT+TGG | + | chr2.1:18371107-18371126 | MS.gene031282:intron | 25.0% |
! | CACTCCAAATATTTAGTTAT+AGG | - | chr2.1:18371114-18371133 | None:intergenic | 25.0% |
! | CCTATAACATAGCATTAAAA+AGG | - | chr2.1:18372287-18372306 | None:intergenic | 25.0% |
! | CTAAAACTATCTGATGTAAA+AGG | + | chr2.1:18375035-18375054 | MS.gene031282:CDS | 25.0% |
! | CTAGTTTCAAATAGTTTGAT+TGG | - | chr2.1:18373966-18373985 | None:intergenic | 25.0% |
! | GAGCCTATTCAAAATATATT+GGG | - | chr2.1:18371325-18371344 | None:intergenic | 25.0% |
! | GGTAATAATTCAACAGTATA+TGG | + | chr2.1:18370779-18370798 | MS.gene031282:CDS | 25.0% |
! | GTGACACTAATAAGTAATTA+GGG | + | chr2.1:18373881-18373900 | MS.gene031282:intron | 25.0% |
! | GTTGTAAATACGGAAAAATA+GGG | + | chr2.1:18372628-18372647 | MS.gene031282:intron | 25.0% |
! | TAACATTGACATGTAAACAT+CGG | - | chr2.1:18374782-18374801 | None:intergenic | 25.0% |
! | TATAACACTTTATATGGCTA+GGG | + | chr2.1:18371432-18371451 | MS.gene031282:intron | 25.0% |
! | TCTGATACCATCTTAAAATT+CGG | + | chr2.1:18371343-18371362 | MS.gene031282:intron | 25.0% |
! | TGGGAATATAACACTTTATA+TGG | + | chr2.1:18371426-18371445 | MS.gene031282:intron | 25.0% |
! | TGTACTTGAATCTTAATTAC+AGG | + | chr2.1:18372700-18372719 | MS.gene031282:intron | 25.0% |
! | TGTGACACTAATAAGTAATT+AGG | + | chr2.1:18373880-18373899 | MS.gene031282:intron | 25.0% |
! | TTAAATGAATCAAATCTTCC+TGG | - | chr2.1:18371780-18371799 | None:intergenic | 25.0% |
!! | CATTTCTAGAAGAAAATTGA+TGG | - | chr2.1:18373812-18373831 | None:intergenic | 25.0% |
!! | CCTTTTTAATGCTATGTTAT+AGG | + | chr2.1:18372284-18372303 | MS.gene031282:intron | 25.0% |
!! | TTATCTTGTTTCACATTCTT+TGG | - | chr2.1:18375626-18375645 | None:intergenic | 25.0% |
!!! | AGAAAGTTTTGTTTCAAATG+TGG | - | chr2.1:18371928-18371947 | None:intergenic | 25.0% |
!!! | CTAAGTTAAAGCCTTTTTTT+TGG | + | chr2.1:18373280-18373299 | MS.gene031282:CDS | 25.0% |
!!! | TCAATCACTTTTAAAATCGA+GGG | - | chr2.1:18372387-18372406 | None:intergenic | 25.0% |
!!! | TGATAGCTTTGATATGTTTT+TGG | + | chr2.1:18374316-18374335 | MS.gene031282:intron | 25.0% |
!!! | TTGTTTTGCATTTCTATGTA+AGG | - | chr2.1:18374263-18374282 | None:intergenic | 25.0% |
AAAATCAACCGTAAATGCAA+AGG | + | chr2.1:18372536-18372555 | MS.gene031282:intron | 30.0% | |
AAATCGTGGATTTAGAAACA+AGG | - | chr2.1:18372360-18372379 | None:intergenic | 30.0% | |
AACAATTTAGACGGTGATAA+GGG | + | chr2.1:18375374-18375393 | MS.gene031282:CDS | 30.0% | |
AATGTATCCGTATGAAGTAT+TGG | - | chr2.1:18374193-18374212 | None:intergenic | 30.0% | |
AGAAAAAACGATGCTTATGT+GGG | + | chr2.1:18371958-18371977 | MS.gene031282:CDS | 30.0% | |
AGAAGAAGAGAAGAAAATCA+TGG | + | chr2.1:18375457-18375476 | MS.gene031282:CDS | 30.0% | |
AGACTAACAATGTTAATGTC+AGG | + | chr2.1:18374801-18374820 | MS.gene031282:intron | 30.0% | |
AGGGATCAAAGTTGTAAATA+CGG | + | chr2.1:18372618-18372637 | MS.gene031282:intron | 30.0% | |
AGTTACTTATGTGGCATATA+TGG | - | chr2.1:18372499-18372518 | None:intergenic | 30.0% | |
AGTTCGGCATTATAATATCA+AGG | - | chr2.1:18373456-18373475 | None:intergenic | 30.0% | |
ATACCATCTTAAAATTCGGA+TGG | + | chr2.1:18371347-18371366 | MS.gene031282:intron | 30.0% | |
CAAGATTAATGTCTTCAAGA+AGG | - | chr2.1:18375181-18375200 | None:intergenic | 30.0% | |
CAGAATGATAAAATCAAAGG+TGG | + | chr2.1:18373636-18373655 | MS.gene031282:CDS | 30.0% | |
CAGGTTTAATGAAGAAATGA+TGG | + | chr2.1:18373590-18373609 | MS.gene031282:intron | 30.0% | |
CTTTCTTTGAGTCAATGATT+TGG | - | chr2.1:18373704-18373723 | None:intergenic | 30.0% | |
GAGATATCTCTCATATAATG+TGG | + | chr2.1:18371406-18371425 | MS.gene031282:intron | 30.0% | |
GATATGGGTGATTTGATATT+GGG | + | chr2.1:18371296-18371315 | MS.gene031282:intron | 30.0% | |
GATTTCTGAGCTAATTTCAT+TGG | - | chr2.1:18371857-18371876 | None:intergenic | 30.0% | |
TATCAAAGCTATCATACAAG+TGG | - | chr2.1:18374310-18374329 | None:intergenic | 30.0% | |
TATTCATCTGCATCAAAAGA+AGG | - | chr2.1:18373511-18373530 | None:intergenic | 30.0% | |
TATTTAGTTATAGGTGTGAG+GGG | - | chr2.1:18371105-18371124 | None:intergenic | 30.0% | |
TCATACAAAACCATCTTGTA+AGG | + | chr2.1:18371048-18371067 | MS.gene031282:intron | 30.0% | |
TCCATTCGTTTAAAAGCAAA+TGG | - | chr2.1:18374493-18374512 | None:intergenic | 30.0% | |
TGATATGGGTGATTTGATAT+TGG | + | chr2.1:18371295-18371314 | MS.gene031282:intron | 30.0% | |
TGGATCAAAAGTTCAAGAAA+AGG | + | chr2.1:18373218-18373237 | MS.gene031282:CDS | 30.0% | |
TTATGTTGTTGTAGATGTTG+TGG | + | chr2.1:18372156-18372175 | MS.gene031282:CDS | 30.0% | |
TTTCTCTAGTATAAAAACCG+AGG | + | chr2.1:18375154-18375173 | MS.gene031282:CDS | 30.0% | |
! | AGACTAGATTTTGCAACTAA+TGG | - | chr2.1:18371471-18371490 | None:intergenic | 30.0% |
! | AGCATATTTTTCATGCACTT+GGG | + | chr2.1:18373984-18374003 | MS.gene031282:intron | 30.0% |
! | TACTACTCTCTTTTATCACT+CGG | - | chr2.1:18375133-18375152 | None:intergenic | 30.0% |
! | TAGCATATTTTTCATGCACT+TGG | + | chr2.1:18373983-18374002 | MS.gene031282:intron | 30.0% |
! | TCAATGATTTGGATATACTG+AGG | - | chr2.1:18373693-18373712 | None:intergenic | 30.0% |
! | TCATTTTACAACTGTTTACG+TGG | + | chr2.1:18373414-18373433 | MS.gene031282:intron | 30.0% |
!! | GAAATGATGGAATCTCTTTT+TGG | + | chr2.1:18373603-18373622 | MS.gene031282:CDS | 30.0% |
!! | GTACTGGTGATTATTTTCAT+GGG | + | chr2.1:18375492-18375511 | MS.gene031282:CDS | 30.0% |
!! | GTGTACTTTTTGCATTGTTT+TGG | + | chr2.1:18370812-18370831 | MS.gene031282:CDS | 30.0% |
!! | TATAAGCATTGAAGAACACA+AGG | + | chr2.1:18370854-18370873 | MS.gene031282:CDS | 30.0% |
!! | TCCATTTGCTTTTAAACGAA+TGG | + | chr2.1:18374489-18374508 | MS.gene031282:CDS | 30.0% |
!! | TGGCCCAATATATTTTGAAT+AGG | + | chr2.1:18371319-18371338 | MS.gene031282:intron | 30.0% |
!!! | AGTACTGGTGATTATTTTCA+TGG | + | chr2.1:18375491-18375510 | MS.gene031282:CDS | 30.0% |
!!! | ATTTTGAGACTGAATTTCGA+TGG | + | chr2.1:18372424-18372443 | MS.gene031282:intron | 30.0% |
!!! | CTCTTGTTTTTATAAGACCA+TGG | - | chr2.1:18375331-18375350 | None:intergenic | 30.0% |
!!! | GTCAATCACTTTTAAAATCG+AGG | - | chr2.1:18372388-18372407 | None:intergenic | 30.0% |
!!! | TCCTCAAATATTTTGGTTGA+GGG | - | chr2.1:18370984-18371003 | None:intergenic | 30.0% |
!!! | TGATATGTTTTTGGTTGATC+AGG | + | chr2.1:18374325-18374344 | MS.gene031282:intron | 30.0% |
!!! | TTCCTCAAATATTTTGGTTG+AGG | - | chr2.1:18370985-18371004 | None:intergenic | 30.0% |
AAAACCATCTTGTAAGGTGA+GGG | + | chr2.1:18371054-18371073 | MS.gene031282:intron | 35.0% | |
AACATGACGTAGATATCTTC+TGG | - | chr2.1:18371995-18372014 | None:intergenic | 35.0% | |
AATAGTATCGTCAGATTCTC+TGG | + | chr2.1:18373857-18373876 | MS.gene031282:intron | 35.0% | |
ACAATTTAGACGGTGATAAG+GGG | + | chr2.1:18375375-18375394 | MS.gene031282:CDS | 35.0% | |
ACACTTCAATTGTCTAGTCT+TGG | - | chr2.1:18371271-18371290 | None:intergenic | 35.0% | |
ACCCTCAACCAAAATATTTG+AGG | + | chr2.1:18370980-18370999 | MS.gene031282:intron | 35.0% | |
ACTCAGATCAAACTATGGTT+TGG | + | chr2.1:18373319-18373338 | MS.gene031282:CDS | 35.0% | |
AGCAAACTCAGATCAAACTA+TGG | + | chr2.1:18373314-18373333 | MS.gene031282:CDS | 35.0% | |
AGGAAAGATATTGGAGATCT+TGG | + | chr2.1:18371799-18371818 | MS.gene031282:CDS | 35.0% | |
AGTCTCAAAATGCATAAGTG+GGG | - | chr2.1:18372415-18372434 | None:intergenic | 35.0% | |
ATTTAGTTATAGGTGTGAGG+GGG | - | chr2.1:18371104-18371123 | None:intergenic | 35.0% | |
CAAGACTAGCATATCATCAT+AGG | - | chr2.1:18372674-18372693 | None:intergenic | 35.0% | |
CAATTATTTGATCCTGCATC+TGG | + | chr2.1:18370900-18370919 | MS.gene031282:CDS | 35.0% | |
CAGATGCAGGATCAAATAAT+TGG | - | chr2.1:18370902-18370921 | None:intergenic | 35.0% | |
CAGTCTCAAAATGCATAAGT+GGG | - | chr2.1:18372416-18372435 | None:intergenic | 35.0% | |
CTAAAGTTGCAAAAGACTCT+CGG | - | chr2.1:18374561-18374580 | None:intergenic | 35.0% | |
CTTGAAGCTGTTCTTAAAAC+AGG | + | chr2.1:18374951-18374970 | MS.gene031282:CDS | 35.0% | |
GAAATGTTCCATCGTTCATT+CGG | - | chr2.1:18374980-18374999 | None:intergenic | 35.0% | |
GAACAATTTAGACGGTGATA+AGG | + | chr2.1:18375373-18375392 | MS.gene031282:CDS | 35.0% | |
GAGAAAAAACGATGCTTATG+TGG | + | chr2.1:18371957-18371976 | MS.gene031282:CDS | 35.0% | |
GAGTTAGACAAACTGATGAA+AGG | + | chr2.1:18372187-18372206 | MS.gene031282:CDS | 35.0% | |
GATGAAGGAATGAATCCAAT+TGG | - | chr2.1:18374877-18374896 | None:intergenic | 35.0% | |
GGTTATAGTTTCATGACTTC+AGG | + | chr2.1:18371732-18371751 | MS.gene031282:intron | 35.0% | |
GTAACCATTTCTTAGATGAG+TGG | + | chr2.1:18371698-18371717 | MS.gene031282:intron | 35.0% | |
GTTTGTGCCAATACTTCATA+CGG | + | chr2.1:18374183-18374202 | MS.gene031282:intron | 35.0% | |
TAAAGTTGCAAAAGACTCTC+GGG | - | chr2.1:18374560-18374579 | None:intergenic | 35.0% | |
TCACTAAATGAGGAGAAACA+TGG | + | chr2.1:18372754-18372773 | MS.gene031282:CDS | 35.0% | |
TCAGTCTCAAAATGCATAAG+TGG | - | chr2.1:18372417-18372436 | None:intergenic | 35.0% | |
TCTGATGTAAAAGGAGTAGA+TGG | + | chr2.1:18375044-18375063 | MS.gene031282:CDS | 35.0% | |
TGAACCTTGTCCCAAAAAAA+AGG | - | chr2.1:18373294-18373313 | None:intergenic | 35.0% | |
TGTGTGTGATGAGATATATG+AGG | - | chr2.1:18371239-18371258 | None:intergenic | 35.0% | |
TTAAGGTCAAATGATGGTCT+TGG | - | chr2.1:18372841-18372860 | None:intergenic | 35.0% | |
TTACATGACTACTCTTCAAG+AGG | + | chr2.1:18374522-18374541 | MS.gene031282:CDS | 35.0% | |
TTAGATGCTGATGGTTTAAC+AGG | + | chr2.1:18375287-18375306 | MS.gene031282:CDS | 35.0% | |
! | ACTACTCTCTTTTATCACTC+GGG | - | chr2.1:18375132-18375151 | None:intergenic | 35.0% |
! | AGAGTCTTTTGCAACTTTAG+AGG | + | chr2.1:18374561-18374580 | MS.gene031282:CDS | 35.0% |
! | CTAAAGCTTAGACTTTTCAG+TGG | + | chr2.1:18374412-18374431 | MS.gene031282:CDS | 35.0% |
! | GCATATTTTTCATGCACTTG+GGG | + | chr2.1:18373985-18374004 | MS.gene031282:intron | 35.0% |
! | GTGGAAGCATAGATATATTC+TGG | - | chr2.1:18371584-18371603 | None:intergenic | 35.0% |
! | TAGATGAGTGGACTCTAATA+CGG | + | chr2.1:18371710-18371729 | MS.gene031282:intron | 35.0% |
! | TGTTTCACATTCTTTGGTGT+TGG | - | chr2.1:18375620-18375639 | None:intergenic | 35.0% |
!! | AAAGATACTGCTAGTTCTAG+AGG | + | chr2.1:18375644-18375663 | MS.gene031282:CDS | 35.0% |
!! | CTAATTTCATTGGTGCTACT+TGG | - | chr2.1:18371847-18371866 | None:intergenic | 35.0% |
!! | GTGGCATATATGGTTGATTT+TGG | - | chr2.1:18372489-18372508 | None:intergenic | 35.0% |
!! | GTTGATGATGAATATGTGAC+AGG | + | chr2.1:18373571-18373590 | MS.gene031282:intron | 35.0% |
!! | TCTTTTGCAACTTTAGAGGT+AGG | + | chr2.1:18374565-18374584 | MS.gene031282:intron | 35.0% |
!! | TGGCATAATGGATCTTAGTT+AGG | + | chr2.1:18371158-18371177 | MS.gene031282:intron | 35.0% |
!! | TTCTTTGGTGTTGGTTTCTT+TGG | - | chr2.1:18375611-18375630 | None:intergenic | 35.0% |
!! | TTTAGTTCTTCCTCTGAAGT+TGG | - | chr2.1:18374397-18374416 | None:intergenic | 35.0% |
!!! | AAAGCCTTTTTTTTGGGACA+AGG | + | chr2.1:18373287-18373306 | MS.gene031282:CDS | 35.0% |
!!! | ACAGAGCTACTTTTGGATAT+TGG | + | chr2.1:18374226-18374245 | MS.gene031282:intron | 35.0% |
!!! | ACCTTACAAGCTGGTTTTTA+GGG | - | chr2.1:18371384-18371403 | None:intergenic | 35.0% |
!!! | ATATGAGGCATGGTTTTGTA+TGG | - | chr2.1:18371224-18371243 | None:intergenic | 35.0% |
!!! | TGGTTTTGTATGGTTGGATT+AGG | - | chr2.1:18371214-18371233 | None:intergenic | 35.0% |
AAACGATGCTTATGTGGGAT+CGG | + | chr2.1:18371963-18371982 | MS.gene031282:CDS | 40.0% | |
AAATCGAGGGACTAAAATCG+TGG | - | chr2.1:18372374-18372393 | None:intergenic | 40.0% | |
AAGAAGGACGAGTCTATGAT+AGG | - | chr2.1:18373495-18373514 | None:intergenic | 40.0% | |
AATCGCTCACGAAAATCTGA+CGG | - | chr2.1:18375701-18375720 | None:intergenic | 40.0% | |
AATGTCTTCAAGAAGGTCCT+CGG | - | chr2.1:18375174-18375193 | None:intergenic | 40.0% | |
ACAGGAACAACAGCTAGATT+AGG | + | chr2.1:18375305-18375324 | MS.gene031282:CDS | 40.0% | |
ACCCTAAAAACCAGCTTGTA+AGG | + | chr2.1:18371380-18371399 | MS.gene031282:intron | 40.0% | |
ACTTGTCAGTGTCTAGTGAT+TGG | + | chr2.1:18374160-18374179 | MS.gene031282:intron | 40.0% | |
AGCAAGAGTGATTACTCTGT+TGG | + | chr2.1:18372225-18372244 | MS.gene031282:CDS | 40.0% | |
ATACTGAGGTGTATCACGTA+AGG | - | chr2.1:18373679-18373698 | None:intergenic | 40.0% | |
ATATGTGTCAGTATCTGGCA+CGG | + | chr2.1:18374091-18374110 | MS.gene031282:intron | 40.0% | |
ATCAGGGTTTGAAGGAATTC+TGG | - | chr2.1:18374364-18374383 | None:intergenic | 40.0% | |
ATGAACGATGGAACATTTCG+AGG | + | chr2.1:18374981-18375000 | MS.gene031282:CDS | 40.0% | |
ATGCTCGACAAAACCCTTAA+CGG | - | chr2.1:18375411-18375430 | None:intergenic | 40.0% | |
ATGGGTGATTTGATATTGGG+TGG | + | chr2.1:18371299-18371318 | MS.gene031282:intron | 40.0% | |
CAAAACCATCTTGTAAGGTG+AGG | + | chr2.1:18371053-18371072 | MS.gene031282:intron | 40.0% | |
CACCAATGCAGTTATAGCTA+TGG | - | chr2.1:18372109-18372128 | None:intergenic | 40.0% | |
CTTGTCAGTGTCTAGTGATT+GGG | + | chr2.1:18374161-18374180 | MS.gene031282:intron | 40.0% | |
GAATCTCAACCAGAGATTTC+AGG | - | chr2.1:18374471-18374490 | None:intergenic | 40.0% | |
GAGATGGCGAACAATTTAGA+CGG | + | chr2.1:18375365-18375384 | MS.gene031282:CDS | 40.0% | |
GAGTCCACTCATCTAAGAAA+TGG | - | chr2.1:18371705-18371724 | None:intergenic | 40.0% | |
GGACATGCCTTTAATGTGAA+GGG | - | chr2.1:18374063-18374082 | None:intergenic | 40.0% | |
GTCTCAAAATGCATAAGTGG+GGG | - | chr2.1:18372414-18372433 | None:intergenic | 40.0% | |
GTCTGATATGTGTCAGTATC+TGG | + | chr2.1:18374086-18374105 | MS.gene031282:intron | 40.0% | |
GTGATGAGATATATGAGGCA+TGG | - | chr2.1:18371234-18371253 | None:intergenic | 40.0% | |
GTTCAAGAAAAGGCTGTTGT+TGG | + | chr2.1:18373228-18373247 | MS.gene031282:CDS | 40.0% | |
TACTGACACATATCAGACAC+CGG | - | chr2.1:18374084-18374103 | None:intergenic | 40.0% | |
TCAACCGTAAATGCAAAGGT+CGG | + | chr2.1:18372540-18372559 | MS.gene031282:intron | 40.0% | |
TCAGAAGTCTTAACTGACTG+TGG | - | chr2.1:18372943-18372962 | None:intergenic | 40.0% | |
TCGCAAGTGAGTTACTTATG+TGG | - | chr2.1:18372508-18372527 | None:intergenic | 40.0% | |
TCTTGGCTTATGCATACCAA+AGG | + | chr2.1:18371816-18371835 | MS.gene031282:CDS | 40.0% | |
TGACATGTGTGGTCTGATAA+CGG | + | chr2.1:18371134-18371153 | MS.gene031282:intron | 40.0% | |
TGCCATAGCTATAACTGCAT+TGG | + | chr2.1:18372104-18372123 | MS.gene031282:CDS | 40.0% | |
TGGACTATTGGATGAGGATA+CGG | + | chr2.1:18370920-18370939 | MS.gene031282:CDS | 40.0% | |
TGTTGTAGATGTTGTGGAAG+TGG | + | chr2.1:18372162-18372181 | MS.gene031282:CDS | 40.0% | |
TTAGTTCCTTACTAGCAACC+TGG | - | chr2.1:18374905-18374924 | None:intergenic | 40.0% | |
TTTCCCGACCTTTGCATTTA+CGG | - | chr2.1:18372547-18372566 | None:intergenic | 40.0% | |
! | AAGCTTAGACTTTTCAGTGG+TGG | + | chr2.1:18374415-18374434 | MS.gene031282:CDS | 40.0% |
! | ACTTTTGATCCACCAGCTAA+AGG | - | chr2.1:18373210-18373229 | None:intergenic | 40.0% |
! | AGATGAGTGGACTCTAATAC+GGG | + | chr2.1:18371711-18371730 | MS.gene031282:intron | 40.0% |
! | CACGTTACAATCTGAAGTGT+CGG | - | chr2.1:18374673-18374692 | None:intergenic | 40.0% |
! | CTAGTCTTCAAAGTGTCTTG+AGG | + | chr2.1:18371484-18371503 | MS.gene031282:intron | 40.0% |
! | CTTCACATTAAAGGCATGTC+CGG | + | chr2.1:18374062-18374081 | MS.gene031282:intron | 40.0% |
! | GCATTGACCCTTCACATTAA+AGG | + | chr2.1:18374053-18374072 | MS.gene031282:intron | 40.0% |
! | GGAGGTTTAAGGTCAAATGA+TGG | - | chr2.1:18372847-18372866 | None:intergenic | 40.0% |
! | GTTTGGAATCAACTCAAAGC+AGG | + | chr2.1:18373336-18373355 | MS.gene031282:CDS | 40.0% |
! | TATTTGGAGTGTGACATGTG+TGG | + | chr2.1:18371123-18371142 | MS.gene031282:intron | 40.0% |
! | TATTTTTCATGCACTTGGGG+AGG | + | chr2.1:18373988-18374007 | MS.gene031282:intron | 40.0% |
! | TGAGATGCTTATGTGCTACT+TGG | + | chr2.1:18372453-18372472 | MS.gene031282:intron | 40.0% |
!! | CTAAAGGTCTAAGACCCTTT+TGG | - | chr2.1:18373194-18373213 | None:intergenic | 40.0% |
!! | GATTATTTTCATGGGAGTGC+AGG | + | chr2.1:18375500-18375519 | MS.gene031282:CDS | 40.0% |
!! | GGTCCATCCGAATTTTAAGA+TGG | - | chr2.1:18371353-18371372 | None:intergenic | 40.0% |
!!! | CACCTTACAAGCTGGTTTTT+AGG | - | chr2.1:18371385-18371404 | None:intergenic | 40.0% |
!!! | CTGGTTTTTAGGGTTCAGTT+AGG | - | chr2.1:18371374-18371393 | None:intergenic | 40.0% |
!!! | TTTTTTTCTCCCAAGTGTCG+AGG | - | chr2.1:18372021-18372040 | None:intergenic | 40.0% |
AACGATGGAACATTTCGAGG+AGG | + | chr2.1:18374984-18375003 | MS.gene031282:CDS | 45.0% | |
AAGGGTCTTAGACCTTTAGC+TGG | + | chr2.1:18373195-18373214 | MS.gene031282:CDS | 45.0% | |
AATGTAACCACATCGACGTG+AGG | - | chr2.1:18374731-18374750 | None:intergenic | 45.0% | |
ACAACAGCTAGATTAGGCCA+TGG | + | chr2.1:18375311-18375330 | MS.gene031282:CDS | 45.0% | |
ACAGGAAACCGAATGAACGA+TGG | + | chr2.1:18374969-18374988 | MS.gene031282:CDS | 45.0% | |
ACTTCCCTCACCTTACAAGA+TGG | - | chr2.1:18371061-18371080 | None:intergenic | 45.0% | |
AGCTATGTAACACCTAGCCA+TGG | - | chr2.1:18373542-18373561 | None:intergenic | 45.0% | |
AGGGTTTGAAGGAATTCTGG+TGG | - | chr2.1:18374361-18374380 | None:intergenic | 45.0% | |
AGTGGTGGTCTTTCTCAACT+TGG | + | chr2.1:18374430-18374449 | MS.gene031282:CDS | 45.0% | |
ATACCATTTCCTACCCTACC+AGG | - | chr2.1:18372871-18372890 | None:intergenic | 45.0% | |
ATATCTCGCACCTTACAAGC+TGG | - | chr2.1:18371393-18371412 | None:intergenic | 45.0% | |
CAACCGTAAATGCAAAGGTC+GGG | + | chr2.1:18372541-18372560 | MS.gene031282:intron | 45.0% | |
CAAGAGATAATCCGAACCGA+AGG | + | chr2.1:18375095-18375114 | MS.gene031282:CDS | 45.0% | |
CCATCTTCATCAGGGTTTGA+AGG | - | chr2.1:18374372-18374391 | None:intergenic | 45.0% | |
CCTTCAAACCCTGATGAAGA+TGG | + | chr2.1:18374369-18374388 | MS.gene031282:CDS | 45.0% | |
CGGACATGCCTTTAATGTGA+AGG | - | chr2.1:18374064-18374083 | None:intergenic | 45.0% | |
CTGCTCTTAATCCTTCGGTT+CGG | - | chr2.1:18375109-18375128 | None:intergenic | 45.0% | |
GAAAGAGGATCAGATCTTCC+AGG | - | chr2.1:18372913-18372932 | None:intergenic | 45.0% | |
GAACAGCTTCAAGAAGCTTG+AGG | - | chr2.1:18374944-18374963 | None:intergenic | 45.0% | |
GAAGAAGATCGATCACTCAC+TGG | - | chr2.1:18373368-18373387 | None:intergenic | 45.0% | |
GAAGATCATTACCGCGAACT+CGG | + | chr2.1:18375206-18375225 | MS.gene031282:CDS | 45.0% | |
GACATGTGTGGTCTGATAAC+GGG | + | chr2.1:18371135-18371154 | MS.gene031282:intron | 45.0% | |
GACTGTGGTTCAGTTGAAAG+AGG | - | chr2.1:18372928-18372947 | None:intergenic | 45.0% | |
GCATGCTCATTCACATCATG+TGG | - | chr2.1:18371603-18371622 | None:intergenic | 45.0% | |
GGGTTTGAAGGAATTCTGGT+GGG | - | chr2.1:18374360-18374379 | None:intergenic | 45.0% | |
GTTCGTGATGCACTACTTGA+AGG | + | chr2.1:18373774-18373793 | MS.gene031282:CDS | 45.0% | |
TCAGCTCAGTGGTAAGAGTT+CGG | - | chr2.1:18373472-18373491 | None:intergenic | 45.0% | |
TCATACGGATACATTCGCTG+AGG | + | chr2.1:18374198-18374217 | MS.gene031282:intron | 45.0% | |
TCATCCAATAGTCCAGATGC+AGG | - | chr2.1:18370915-18370934 | None:intergenic | 45.0% | |
TCATTCCTTCATCTCGTTCC+AGG | + | chr2.1:18374884-18374903 | MS.gene031282:intron | 45.0% | |
TCTATGATAGGTCAGCTCAG+TGG | - | chr2.1:18373483-18373502 | None:intergenic | 45.0% | |
TGACGTTAGACAACAAGCAC+AGG | - | chr2.1:18374699-18374718 | None:intergenic | 45.0% | |
TGATCCTGCATCTGGACTAT+TGG | + | chr2.1:18370908-18370927 | MS.gene031282:CDS | 45.0% | |
TGCATCTGGACTATTGGATG+AGG | + | chr2.1:18370914-18370933 | MS.gene031282:CDS | 45.0% | |
TGGTCTTTCTCAACTTGGTC+CGG | + | chr2.1:18374435-18374454 | MS.gene031282:CDS | 45.0% | |
TGTTTCCAGCAGTGGTAGAT+AGG | + | chr2.1:18375720-18375739 | MS.gene031282:CDS | 45.0% | |
TTCAGACGATGACAGTCCAT+AGG | + | chr2.1:18375760-18375779 | MS.gene031282:CDS | 45.0% | |
TTTGACCTTAAACCTCCACC+TGG | + | chr2.1:18372850-18372869 | MS.gene031282:CDS | 45.0% | |
! | ATGGCTCTTGTGAAGAGTAC+TGG | + | chr2.1:18375476-18375495 | MS.gene031282:CDS | 45.0% |
! | CTAAGACCCTTTTGGCCAAA+TGG | - | chr2.1:18373186-18373205 | None:intergenic | 45.0% |
! | GATGCTATGGATTACTTGCC+AGG | + | chr2.1:18371759-18371778 | MS.gene031282:CDS | 45.0% |
! | GGGTTTTACGAGACCGTTAA+GGG | + | chr2.1:18375395-18375414 | MS.gene031282:CDS | 45.0% |
! | TGATCGGTTCCTGAAATCTC+TGG | + | chr2.1:18374459-18374478 | MS.gene031282:CDS | 45.0% |
!! | AAGGCTGTTGTTGGTTCAGA+AGG | + | chr2.1:18373237-18373256 | MS.gene031282:CDS | 45.0% |
!! | AAGTTGGTGCCATCTTCATC+AGG | - | chr2.1:18374381-18374400 | None:intergenic | 45.0% |
!! | AGTTGGTGCCATCTTCATCA+GGG | - | chr2.1:18374380-18374399 | None:intergenic | 45.0% |
!! | GTGCTACTTGGTGATTCCTT+TGG | - | chr2.1:18371835-18371854 | None:intergenic | 45.0% |
!! | GTTGTTGGTTCAGAAGGTGA+AGG | + | chr2.1:18373243-18373262 | MS.gene031282:CDS | 45.0% |
!! | TCTGATAACGGGTGGCATAA+TGG | + | chr2.1:18371146-18371165 | MS.gene031282:intron | 45.0% |
!! | TTGTCTAGTCTTGGACGTGA+TGG | - | chr2.1:18371262-18371281 | None:intergenic | 45.0% |
!!! | GAGGCATGGTTTTGTATGGT+TGG | - | chr2.1:18371220-18371239 | None:intergenic | 45.0% |
ACCTTAAACCTCCACCTGGT+AGG | + | chr2.1:18372854-18372873 | MS.gene031282:CDS | 50.0% | |
ACTCTCCTATCTACCACTGC+TGG | - | chr2.1:18375728-18375747 | None:intergenic | 50.0% | |
AGAGGATCAGATCTTCCAGG+AGG | - | chr2.1:18372910-18372929 | None:intergenic | 50.0% | |
AGCAACCTGGAACGAGATGA+AGG | - | chr2.1:18374892-18374911 | None:intergenic | 50.0% | |
AGCAGTGGTAGATAGGAGAG+TGG | + | chr2.1:18375727-18375746 | MS.gene031282:CDS | 50.0% | |
CAACTTGAAGACCGAGTTCG+CGG | - | chr2.1:18375220-18375239 | None:intergenic | 50.0% | |
CATGTTTCGCCTCGACACTT+GGG | + | chr2.1:18372009-18372028 | MS.gene031282:CDS | 50.0% | |
CCTTAAACCTCCACCTGGTA+GGG | + | chr2.1:18372855-18372874 | MS.gene031282:CDS | 50.0% | |
CTAGGCGTTTCTATTCCAGG+AGG | - | chr2.1:18372997-18373016 | None:intergenic | 50.0% | |
CTCGTTCCAGGTTGCTAGTA+AGG | + | chr2.1:18374896-18374915 | MS.gene031282:intron | 50.0% | |
CTCTTGCTCATGCTGAGAAG+TGG | - | chr2.1:18372213-18372232 | None:intergenic | 50.0% | |
CTGCTAGGCGTTTCTATTCC+AGG | - | chr2.1:18373000-18373019 | None:intergenic | 50.0% | |
CTTCCAGGAGGAGGTTTCAA+AGG | - | chr2.1:18372898-18372917 | None:intergenic | 50.0% | |
GAAGATGGCACCAACTTCAG+AGG | + | chr2.1:18374384-18374403 | MS.gene031282:CDS | 50.0% | |
GACTTCAGGCAGAGATGCTA+TGG | + | chr2.1:18371746-18371765 | MS.gene031282:intron | 50.0% | |
GATTTCAGGAACCGATCAGC+CGG | - | chr2.1:18374457-18374476 | None:intergenic | 50.0% | |
GCAGCAGCATTAGATGCTGA+TGG | + | chr2.1:18375278-18375297 | MS.gene031282:CDS | 50.0% | |
GGAATAGAAACGCCTAGCAG+TGG | + | chr2.1:18373000-18373019 | MS.gene031282:CDS | 50.0% | |
GGACCACCATTTCCAGGTTT+CGG | - | chr2.1:18373081-18373100 | None:intergenic | 50.0% | |
GGAGTGCAGGAAGAGATGAA+GGG | + | chr2.1:18375513-18375532 | MS.gene031282:CDS | 50.0% | |
GGTCTTAGACCTTTAGCTGG+TGG | + | chr2.1:18373198-18373217 | MS.gene031282:CDS | 50.0% | |
GTTTCTATTCCAGGAGGTGG+AGG | - | chr2.1:18372991-18373010 | None:intergenic | 50.0% | |
TCATGTTTCGCCTCGACACT+TGG | + | chr2.1:18372008-18372027 | MS.gene031282:CDS | 50.0% | |
TCGGGCTGCTCTTAATCCTT+CGG | - | chr2.1:18375114-18375133 | None:intergenic | 50.0% | |
TGAGCGATTGTTTCCAGCAG+TGG | + | chr2.1:18375712-18375731 | MS.gene031282:CDS | 50.0% | |
! | AGACCCTTTTGGCCAAATGG+CGG | - | chr2.1:18373183-18373202 | None:intergenic | 50.0% |
! | GGGGTTTTACGAGACCGTTA+AGG | + | chr2.1:18375394-18375413 | MS.gene031282:CDS | 50.0% |
!! | ATGTGTGGTCTGATAACGGG+TGG | + | chr2.1:18371138-18371157 | MS.gene031282:intron | 50.0% |
!! | GGCACACACAGAGCTACTTT+TGG | + | chr2.1:18374219-18374238 | MS.gene031282:intron | 50.0% |
AAACCTCCACCTGGTAGGGT+AGG | + | chr2.1:18372859-18372878 | MS.gene031282:CDS | 55.0% | |
ACGACATCCTCACGTCGATG+TGG | + | chr2.1:18374721-18374740 | MS.gene031282:intron | 55.0% | |
CAGTATCTGGCACGGACACA+TGG | + | chr2.1:18374099-18374118 | MS.gene031282:intron | 55.0% | |
CCACCACCGAAACCTGGAAA+TGG | + | chr2.1:18373072-18373091 | MS.gene031282:CDS | 55.0% | |
CCACCATTTCCAGGTTTCGG+TGG | - | chr2.1:18373078-18373097 | None:intergenic | 55.0% | |
CCACCGAAACCTGGAAATGG+TGG | + | chr2.1:18373075-18373094 | MS.gene031282:CDS | 55.0% | |
CCACCTGGTAGGGTAGGAAA+TGG | + | chr2.1:18372865-18372884 | MS.gene031282:CDS | 55.0% | |
CCAGGAGGAGGTTTCAAAGG+AGG | - | chr2.1:18372895-18372914 | None:intergenic | 55.0% | |
CCATTTCCAGGTTTCGGTGG+TGG | - | chr2.1:18373075-18373094 | None:intergenic | 55.0% | |
CCATTTCCTACCCTACCAGG+TGG | - | chr2.1:18372868-18372887 | None:intergenic | 55.0% | |
CCCTACCAGGTGGAGGTTTA+AGG | - | chr2.1:18372858-18372877 | None:intergenic | 55.0% | |
CCTCCGCCATTTGGCCAAAA+GGG | + | chr2.1:18373177-18373196 | MS.gene031282:CDS | 55.0% | |
CGCTCACGAAAATCTGACGG+CGG | - | chr2.1:18375698-18375717 | None:intergenic | 55.0% | |
CTCAACTTGGTCCGGCTGAT+CGG | + | chr2.1:18374443-18374462 | MS.gene031282:CDS | 55.0% | |
CTTACACCGCTCTTAGGAGG+CGG | - | chr2.1:18373153-18373172 | None:intergenic | 55.0% | |
GCTCTTACACCGCTCTTAGG+AGG | - | chr2.1:18373156-18373175 | None:intergenic | 55.0% | |
GGAGCTCTTACACCGCTCTT+AGG | - | chr2.1:18373159-18373178 | None:intergenic | 55.0% | |
GGAGGAATGACACCACTGCT+AGG | - | chr2.1:18373015-18373034 | None:intergenic | 55.0% | |
GGATCAGATCTTCCAGGAGG+AGG | - | chr2.1:18372907-18372926 | None:intergenic | 55.0% | |
GGCGTTTCTATTCCAGGAGG+TGG | - | chr2.1:18372994-18373013 | None:intergenic | 55.0% | |
GGCTTAGGACCACCATTTCC+AGG | - | chr2.1:18373087-18373106 | None:intergenic | 55.0% | |
GTAAGAGCTCCTCCGCCATT+TGG | + | chr2.1:18373168-18373187 | MS.gene031282:CDS | 55.0% | |
TCACGAAAATCTGACGGCGG+TGG | - | chr2.1:18375695-18375714 | None:intergenic | 55.0% | |
TCCTCCGCCATTTGGCCAAA+AGG | + | chr2.1:18373176-18373195 | MS.gene031282:CDS | 55.0% | |
TCTATTCCAGGAGGTGGAGG+TGG | - | chr2.1:18372988-18373007 | None:intergenic | 55.0% | |
TTTCCTACCCTACCAGGTGG+AGG | - | chr2.1:18372865-18372884 | None:intergenic | 55.0% | |
! | GGGAGTGCAGGAAGAGATGA+AGG | + | chr2.1:18375512-18375531 | MS.gene031282:CDS | 55.0% |
! | TTTCCAGGTTTCGGTGGTGG+AGG | - | chr2.1:18373072-18373091 | None:intergenic | 55.0% |
!! | AGGTGGCGGAGGAGGATTAA+CGG | - | chr2.1:18372971-18372990 | None:intergenic | 55.0% |
!! | CCTCCTTTGAAACCTCCTCC+TGG | + | chr2.1:18372892-18372911 | MS.gene031282:CDS | 55.0% |
!! | GGGTTTTGTCGAGCATGCTG+AGG | + | chr2.1:18375415-18375434 | MS.gene031282:CDS | 55.0% |
ATTCCAGGAGGTGGAGGTGG+CGG | - | chr2.1:18372985-18373004 | None:intergenic | 60.0% | |
CGGCGGTGGACGATGAGTTT+CGG | - | chr2.1:18375681-18375700 | None:intergenic | 60.0% | |
TCCACCACCACCAGCGAAAC+CGG | + | chr2.1:18373110-18373129 | MS.gene031282:CDS | 60.0% | |
! | CCCTTTTGGCCAAATGGCGG+AGG | - | chr2.1:18373180-18373199 | None:intergenic | 60.0% |
ACACCGCTCTTAGGAGGCGG+TGG | - | chr2.1:18373150-18373169 | None:intergenic | 65.0% | |
CCACCACCACCAGCGAAACC+GGG | + | chr2.1:18373111-18373130 | MS.gene031282:CDS | 65.0% | |
CCACCACCGCCTCCTAAGAG+CGG | + | chr2.1:18373144-18373163 | MS.gene031282:CDS | 65.0% | |
CCACCACTAGGCTTCGGAGC+GGG | - | chr2.1:18373036-18373055 | None:intergenic | 65.0% | |
CCACCTCCACCACCGAAACC+TGG | + | chr2.1:18373066-18373085 | MS.gene031282:CDS | 65.0% | |
GCCACCACTAGGCTTCGGAG+CGG | - | chr2.1:18373037-18373056 | None:intergenic | 65.0% | |
GCTCCGAAGCCTAGTGGTGG+CGG | + | chr2.1:18373036-18373055 | MS.gene031282:CDS | 65.0% | |
GGACCGCCACCACTAGGCTT+CGG | - | chr2.1:18373042-18373061 | None:intergenic | 65.0% | |
!! | CCAGGTTTCGGTGGTGGAGG+TGG | - | chr2.1:18373069-18373088 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGAGGAGGCTT+AGG | - | chr2.1:18373102-18373121 | None:intergenic | 65.0% |
!! | GGTTTCGCTGGTGGTGGTGG+AGG | - | chr2.1:18373111-18373130 | None:intergenic | 65.0% |
!! | GGTTTCGGTGGTGGAGGTGG+AGG | - | chr2.1:18373066-18373085 | None:intergenic | 65.0% |
!! | TTAGGAGGCGGTGGTGGACG+AGG | - | chr2.1:18373141-18373160 | None:intergenic | 65.0% |
!! | TTCGCTGGTGGTGGTGGAGG+AGG | - | chr2.1:18373108-18373127 | None:intergenic | 65.0% |
!! | TTCGGTGGTGGAGGTGGAGG+AGG | - | chr2.1:18373063-18373082 | None:intergenic | 65.0% |
CCACCACCAGCGAAACCGGG+TGG | + | chr2.1:18373114-18373133 | MS.gene031282:CDS | 70.0% | |
CCACCCGGTTTCGCTGGTGG+TGG | - | chr2.1:18373117-18373136 | None:intergenic | 70.0% | |
CCACTAGGCTTCGGAGCGGG+AGG | - | chr2.1:18373033-18373052 | None:intergenic | 70.0% | |
CCCGCTCCGAAGCCTAGTGG+TGG | + | chr2.1:18373033-18373052 | MS.gene031282:CDS | 70.0% | |
CCGCTCTTAGGAGGCGGTGG+TGG | - | chr2.1:18373147-18373166 | None:intergenic | 70.0% | |
CCTCCCGCTCCGAAGCCTAG+TGG | + | chr2.1:18373030-18373049 | MS.gene031282:CDS | 70.0% | |
CGAGGACCACCCGGTTTCGC+TGG | - | chr2.1:18373123-18373142 | None:intergenic | 70.0% | |
GGACCACCCGGTTTCGCTGG+TGG | - | chr2.1:18373120-18373139 | None:intergenic | 70.0% | |
GGAGGAGGACCGCCACCACT+AGG | - | chr2.1:18373048-18373067 | None:intergenic | 70.0% | |
!! | CCCGGTTTCGCTGGTGGTGG+TGG | - | chr2.1:18373114-18373133 | None:intergenic | 70.0% |
!! | GGTGGTGGACGAGGACCACC+CGG | - | chr2.1:18373132-18373151 | None:intergenic | 70.0% |
CCTCCGCCACCTCCACCTCC+TGG | + | chr2.1:18372979-18372998 | MS.gene031282:CDS | 75.0% | |
! | CCAGGAGGTGGAGGTGGCGG+AGG | - | chr2.1:18372982-18373001 | None:intergenic | 75.0% |
!! | GGAGGTGGAGGTGGCGGAGG+AGG | - | chr2.1:18372979-18372998 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 18370777 | 18375781 | 18370777 | ID=MS.gene031282 |
chr2.1 | mRNA | 18370777 | 18375781 | 18370777 | ID=MS.gene031282.t1;Parent=MS.gene031282 |
chr2.1 | exon | 18370777 | 18370941 | 18370777 | ID=MS.gene031282.t1.exon1;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18370777 | 18370941 | 18370777 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
chr2.1 | exon | 18371754 | 18372246 | 18371754 | ID=MS.gene031282.t1.exon2;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18371754 | 18372246 | 18371754 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
chr2.1 | exon | 18372722 | 18373367 | 18372722 | ID=MS.gene031282.t1.exon3;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18372722 | 18373367 | 18372722 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
chr2.1 | exon | 18373593 | 18373795 | 18373593 | ID=MS.gene031282.t1.exon4;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18373593 | 18373795 | 18373593 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
chr2.1 | exon | 18374347 | 18374582 | 18374347 | ID=MS.gene031282.t1.exon5;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18374347 | 18374582 | 18374347 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
chr2.1 | exon | 18374906 | 18375781 | 18374906 | ID=MS.gene031282.t1.exon6;Parent=MS.gene031282.t1 |
chr2.1 | CDS | 18374906 | 18375781 | 18374906 | ID=cds.MS.gene031282.t1;Parent=MS.gene031282.t1 |
Gene Sequence |
Protein sequence |