Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031347.t1 | XP_003596499.2 | 98.8 | 802 | 10 | 0 | 1 | 802 | 1 | 802 | 0.00E+00 | 1616.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031347.t1 | Q8L6Y1 | 75.2 | 804 | 189 | 4 | 1 | 802 | 1 | 796 | 0.0e+00 | 1265.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031347.t1 | G7IR70 | 98.8 | 802 | 10 | 0 | 1 | 802 | 1 | 802 | 0.0e+00 | 1616.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene007189 | MS.gene031347 | PPI |
MS.gene057206 | MS.gene031347 | PPI |
MS.gene06859 | MS.gene031347 | PPI |
MS.gene050290 | MS.gene031347 | PPI |
MS.gene031347 | MS.gene050252 | PPI |
MS.gene013534 | MS.gene031347 | PPI |
MS.gene034846 | MS.gene031347 | PPI |
MS.gene24706 | MS.gene031347 | PPI |
MS.gene056896 | MS.gene031347 | PPI |
MS.gene06645 | MS.gene031347 | PPI |
MS.gene81765 | MS.gene031347 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031347.t1 | MTR_2g081180 | 98.753 | 802 | 10 | 0 | 1 | 802 | 1 | 802 | 0.0 | 1653 |
MS.gene031347.t1 | MTR_2g081180 | 97.132 | 802 | 9 | 1 | 1 | 802 | 1 | 788 | 0.0 | 1618 |
MS.gene031347.t1 | MTR_2g081180 | 96.509 | 802 | 10 | 1 | 1 | 802 | 1 | 784 | 0.0 | 1606 |
MS.gene031347.t1 | MTR_2g081180 | 97.876 | 565 | 12 | 0 | 238 | 802 | 4 | 568 | 0.0 | 1152 |
MS.gene031347.t1 | MTR_2g081180 | 98.110 | 529 | 10 | 0 | 274 | 802 | 1 | 529 | 0.0 | 1083 |
MS.gene031347.t1 | MTR_8g464880 | 62.500 | 120 | 37 | 2 | 629 | 745 | 1 | 115 | 4.31e-41 | 147 |
MS.gene031347.t1 | MTR_4g077475 | 63.636 | 66 | 24 | 0 | 737 | 802 | 64 | 129 | 2.40e-23 | 96.7 |
MS.gene031347.t1 | MTR_4g077475 | 70.000 | 60 | 17 | 1 | 546 | 605 | 1 | 59 | 8.71e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031347.t1 | AT3G20630 | 75.249 | 804 | 189 | 4 | 1 | 802 | 1 | 796 | 0.0 | 1277 |
Find 191 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCACGATCTTTCTCTTTA+AGG | 0.116685 | 2.1:+19557137 | MS.gene031347:CDS |
TCCATTCAAAATTGGTATTT+TGG | 0.154188 | 2.1:-19556910 | None:intergenic |
CCACTTCCTGCCCACTTTCT+TGG | 0.161699 | 2.1:-19556940 | None:intergenic |
TGTTTCACAGCTGGTTTCTA+TGG | 0.210475 | 2.1:+19560505 | MS.gene031347:CDS |
TCTTTCTTTCAGTTGTTATT+TGG | 0.220648 | 2.1:+19557090 | MS.gene031347:intron |
GATTCTATTCCATTCAAAAT+TGG | 0.229016 | 2.1:-19556918 | None:intergenic |
TAGACGCGATTGGTGGGTTC+AGG | 0.261490 | 2.1:-19552293 | None:intergenic |
GGCTGGTCTGACATCATTTC+CGG | 0.268886 | 2.1:+19559702 | MS.gene031347:CDS |
TTGAGAAATTTCAGAAGAAT+TGG | 0.277779 | 2.1:+19558988 | MS.gene031347:intron |
GACATCATTTCCGGATTATT+TGG | 0.278058 | 2.1:+19559711 | MS.gene031347:CDS |
TTCCACAGGATATCGACTTA+TGG | 0.286341 | 2.1:+19561298 | MS.gene031347:intron |
TTCTTCAAAGGCCTGTCTTC+CGG | 0.312227 | 2.1:-19552611 | None:intergenic |
TCCACAGGATATCGACTTAT+GGG | 0.329168 | 2.1:+19561299 | MS.gene031347:intron |
ATATCCTTCTGTGGAATTAC+CGG | 0.332484 | 2.1:+19553562 | MS.gene031347:CDS |
GTTGATATGCTACTTTCATT+TGG | 0.336414 | 2.1:+19560774 | MS.gene031347:CDS |
CATGTCCTTGGGAGGATTAA+TGG | 0.341823 | 2.1:-19561426 | None:intergenic |
GTGACAAGACAGACAATCTT+TGG | 0.355394 | 2.1:+19553879 | MS.gene031347:CDS |
ACATCTTGAAAGATGGTAGA+TGG | 0.364517 | 2.1:+19561372 | MS.gene031347:CDS |
GAAAAGTTGCATACAATAGA+AGG | 0.364753 | 2.1:+19558838 | MS.gene031347:CDS |
CTTTGAAAAGACTGGAAATC+CGG | 0.366390 | 2.1:+19552553 | MS.gene031347:CDS |
GGGAGCATTTCCACCCAGTT+GGG | 0.379352 | 2.1:-19553853 | None:intergenic |
CGGAACTATTACTGCTGATC+TGG | 0.387196 | 2.1:+19554018 | MS.gene031347:CDS |
CAAATGCCTTCTTTAGACTT+TGG | 0.387309 | 2.1:-19557251 | None:intergenic |
AAAGACGAAGAAGCCGGTTC+CGG | 0.387569 | 2.1:+19552592 | MS.gene031347:CDS |
CTTGCACATGGTTTACTGTC+TGG | 0.392484 | 2.1:+19557623 | MS.gene031347:CDS |
AAACCTACCCTGTTGGCTAT+AGG | 0.396001 | 2.1:+19552632 | MS.gene031347:CDS |
CCAAACTTGAAACTCCTTGC+GGG | 0.398914 | 2.1:-19558786 | None:intergenic |
CCCGCAAGGAGTTTCAAGTT+TGG | 0.407324 | 2.1:+19558786 | MS.gene031347:CDS |
TGACTGATATCAATGATATC+AGG | 0.409150 | 2.1:-19559887 | None:intergenic |
GCACATGCGCAAATTTGTTA+TGG | 0.413937 | 2.1:+19559738 | MS.gene031347:CDS |
AACACAAACCTATAGCCAAC+AGG | 0.418816 | 2.1:-19552640 | None:intergenic |
AGAGCCACGCCCTCTCGAAA+TGG | 0.421013 | 2.1:-19560730 | None:intergenic |
TCGGATAAATCAGCATCATT+TGG | 0.421423 | 2.1:-19561047 | None:intergenic |
GTAAAGATAGCCCATGTCCT+TGG | 0.425428 | 2.1:-19561438 | None:intergenic |
TGATTTCTCATCACTACAAA+AGG | 0.427517 | 2.1:+19556014 | MS.gene031347:CDS |
AAAGGCCTGTCTTCCGGAAC+CGG | 0.427653 | 2.1:-19552605 | None:intergenic |
TGGAATAGAATCCAAGAAAG+TGG | 0.428006 | 2.1:+19556929 | MS.gene031347:CDS |
ACTGATGGAGTGATCCTTTG+TGG | 0.429861 | 2.1:+19553911 | MS.gene031347:CDS |
GATCGTATCTTGTGTTCATC+AGG | 0.440152 | 2.1:+19558816 | MS.gene031347:CDS |
TGCATTTGGGAAGGATTATG+TGG | 0.443375 | 2.1:+19552523 | MS.gene031347:CDS |
TGTTAGTTGCTTCATGCAAT+GGG | 0.443599 | 2.1:-19558887 | None:intergenic |
TGTCGCATAGTAGAAAATTC+CGG | 0.445319 | 2.1:-19558325 | None:intergenic |
GTTTCACAGCTGGTTTCTAT+GGG | 0.445621 | 2.1:+19560506 | MS.gene031347:CDS |
GATTGGTCAATCTAGGAAAC+AGG | 0.446646 | 2.1:+19556990 | MS.gene031347:CDS |
CGTAGCAAAGGTCATCAACC+TGG | 0.446947 | 2.1:+19559914 | MS.gene031347:CDS |
TATGCATCTGTAGGTATTGA+TGG | 0.447383 | 2.1:+19553464 | MS.gene031347:intron |
TTGTTAGTTGCTTCATGCAA+TGG | 0.453282 | 2.1:-19558888 | None:intergenic |
GAAAGCTCACCGCAGATGTA+GGG | 0.456885 | 2.1:-19557780 | None:intergenic |
TTGCACATGGTTTACTGTCT+GGG | 0.459136 | 2.1:+19557624 | MS.gene031347:CDS |
GAGCCACGCCCTCTCGAAAT+GGG | 0.459446 | 2.1:-19560729 | None:intergenic |
CAAGTGGAGCGTGCTAATGC+TGG | 0.464682 | 2.1:+19558747 | MS.gene031347:CDS |
CTGTGAAACAATGTCTTCAT+TGG | 0.465041 | 2.1:-19560492 | None:intergenic |
CTTTGGTTAAATTTGACTGA+TGG | 0.465186 | 2.1:+19553896 | MS.gene031347:CDS |
ATTGTCTGTCTTGTCACATT+GGG | 0.467678 | 2.1:-19553873 | None:intergenic |
TTGCTTGTAGACGCGATTGG+TGG | 0.470730 | 2.1:-19552300 | None:intergenic |
TAAAGATAGCCCATGTCCTT+GGG | 0.473415 | 2.1:-19561437 | None:intergenic |
AGAAAGCTCACCGCAGATGT+AGG | 0.474579 | 2.1:-19557781 | None:intergenic |
ACTGCATCAAACACTACATC+TGG | 0.478137 | 2.1:+19561023 | MS.gene031347:CDS |
TGAAGACATTGTTTCACAGC+TGG | 0.478207 | 2.1:+19560496 | MS.gene031347:CDS |
CAAGCTTCTAAAGGCACCCT+TGG | 0.478820 | 2.1:-19559167 | None:intergenic |
CTAGCTCACATGGAGGATCC+AGG | 0.478997 | 2.1:+19560605 | MS.gene031347:CDS |
TGCTTGTAGACGCGATTGGT+GGG | 0.481175 | 2.1:-19552299 | None:intergenic |
AGGTCCACAGTTGGATCAGC+AGG | 0.481485 | 2.1:-19557282 | None:intergenic |
CCAAGAAAGTGGGCAGGAAG+TGG | 0.484253 | 2.1:+19556940 | MS.gene031347:CDS |
AAGTCTAAAGAAGGCATTTG+AGG | 0.485504 | 2.1:+19557254 | MS.gene031347:CDS |
CGCAAATTTGTTATGGAGGA+GGG | 0.487406 | 2.1:+19559745 | MS.gene031347:CDS |
CATTAATCCTCCCAAGGACA+TGG | 0.488021 | 2.1:+19561427 | MS.gene031347:CDS |
TTTAGTTGCTGCTAGCCATC+CGG | 0.489423 | 2.1:+19558306 | MS.gene031347:CDS |
ATTTCTGAATCATCCTCAAC+GGG | 0.489963 | 2.1:-19560461 | None:intergenic |
AGAAGCCGGTTCCGGAAGAC+AGG | 0.492278 | 2.1:+19552600 | MS.gene031347:CDS |
AGACGCGATTGGTGGGTTCA+GGG | 0.494744 | 2.1:-19552292 | None:intergenic |
CTGATGGAGTGATCCTTTGT+GGG | 0.494763 | 2.1:+19553912 | MS.gene031347:CDS |
TTGACCAATCCTGTGTATCC+AGG | 0.496798 | 2.1:-19556977 | None:intergenic |
ATTTGTTATGGAGGAGGGAT+GGG | 0.498587 | 2.1:+19559750 | MS.gene031347:CDS |
ATGTGCAACACCAAATAATC+CGG | 0.500599 | 2.1:-19559721 | None:intergenic |
GGTTGGAACTTTGAAAAGAC+TGG | 0.503883 | 2.1:+19552545 | MS.gene031347:CDS |
TGGGAGCATTTCCACCCAGT+TGG | 0.505198 | 2.1:-19553854 | None:intergenic |
TCAAGATGACGTTGCTCGAA+AGG | 0.505759 | 2.1:+19560800 | MS.gene031347:CDS |
CTTGCAAGGCAAGCTTCTAA+AGG | 0.506121 | 2.1:-19559176 | None:intergenic |
ATGGGAATTGTTAGCCACAT+TGG | 0.506553 | 2.1:+19561317 | MS.gene031347:CDS |
TATGAAAGTGAAACATAGTC+AGG | 0.507916 | 2.1:-19553542 | None:intergenic |
GCGCAAATTTGTTATGGAGG+AGG | 0.509069 | 2.1:+19559744 | MS.gene031347:CDS |
TTGGGAAGGATTATGTGGGT+TGG | 0.509534 | 2.1:+19552528 | MS.gene031347:CDS |
TTGTGATAGGTCTGGTGATG+AGG | 0.514427 | 2.1:+19559136 | MS.gene031347:intron |
CAGCATTAGCACGCTCCACT+TGG | 0.514650 | 2.1:-19558746 | None:intergenic |
GCTCCCATTTCGAGAGGGCG+TGG | 0.514907 | 2.1:+19560726 | MS.gene031347:CDS |
GGGGAAGAGCTTCTACCAGA+TGG | 0.515204 | 2.1:+19559935 | MS.gene031347:CDS |
CGGGAGCTGAGAAGCTTGCA+AGG | 0.515232 | 2.1:-19559190 | None:intergenic |
TTCAAATACTAGGAGCAAGA+AGG | 0.522847 | 2.1:+19558259 | MS.gene031347:intron |
TGCTAGATGCGGGTGCTGAA+CGG | 0.523169 | 2.1:+19553738 | MS.gene031347:CDS |
GCTATAAATACATCAAATGC+TGG | 0.525024 | 2.1:+19560557 | MS.gene031347:CDS |
TATAAACCAAAGTCTAAAGA+AGG | 0.526780 | 2.1:+19557245 | MS.gene031347:CDS |
TCCAACACATTATCATCCTC+CGG | 0.529571 | 2.1:-19555955 | None:intergenic |
ATGTTGGAAACGGATGCATC+AGG | 0.530519 | 2.1:-19560993 | None:intergenic |
TACACAGGATTGGTCAATCT+AGG | 0.531009 | 2.1:+19556983 | MS.gene031347:CDS |
TTCTGTGGAATTACCGGAGA+AGG | 0.533894 | 2.1:+19553568 | MS.gene031347:CDS |
TTCTTGCTTGTAGACGCGAT+TGG | 0.533981 | 2.1:-19552303 | None:intergenic |
AATTTGTTATGGAGGAGGGA+TGG | 0.534308 | 2.1:+19559749 | MS.gene031347:CDS |
GATTGTCTGTCTTGTCACAT+TGG | 0.534886 | 2.1:-19553874 | None:intergenic |
AGTAGCATCCATGTTGGAAA+CGG | 0.535832 | 2.1:-19561003 | None:intergenic |
TGGGCAACAAATACCTTCTC+CGG | 0.537224 | 2.1:-19553581 | None:intergenic |
ACAATGTCTTCATTGGCTAA+AGG | 0.540872 | 2.1:-19560485 | None:intergenic |
ACTGCTGATCTGGAGGCAGC+AGG | 0.541599 | 2.1:+19554028 | MS.gene031347:CDS |
GCTAGATGTTGTGCTAAAAG+TGG | 0.543937 | 2.1:-19555979 | None:intergenic |
TTCACTTTCATATCCTTCTG+TGG | 0.545000 | 2.1:+19553553 | MS.gene031347:CDS |
GGGAAGAGCTTCTACCAGAT+GGG | 0.548105 | 2.1:+19559936 | MS.gene031347:CDS |
GTGATGAGGTTGTACGTCCA+AGG | 0.550600 | 2.1:+19559150 | MS.gene031347:CDS |
TCAAATACTAGGAGCAAGAA+GGG | 0.551715 | 2.1:+19558260 | MS.gene031347:intron |
TAATGCTGGGAAAACTGAAC+TGG | 0.553010 | 2.1:+19558761 | MS.gene031347:CDS |
AAGTGGAGCGTGCTAATGCT+GGG | 0.554489 | 2.1:+19558748 | MS.gene031347:CDS |
TACCCACTCGCTGTAAAGCT+CGG | 0.555270 | 2.1:+19553998 | MS.gene031347:CDS |
TGGACCTGGATACACAGGAT+TGG | 0.555748 | 2.1:+19556973 | MS.gene031347:CDS |
TGATGCATCCGTTTCCAACA+TGG | 0.558113 | 2.1:+19560995 | MS.gene031347:CDS |
ATCAAATGCTGGAGTAGAAG+AGG | 0.558286 | 2.1:+19560568 | MS.gene031347:CDS |
AATATAACCTGTAGGTCGGC+TGG | 0.558667 | 2.1:+19559685 | MS.gene031347:intron |
ATCAGTCACATGCGTAGCAA+AGG | 0.558895 | 2.1:+19559902 | MS.gene031347:CDS |
GTTGCACACATCTTGAAAGA+TGG | 0.559694 | 2.1:+19561365 | MS.gene031347:CDS |
ATATTCTGTTCCACAAGTTG+AGG | 0.563078 | 2.1:+19557649 | MS.gene031347:CDS |
GGAATAGAATCCAAGAAAGT+GGG | 0.563834 | 2.1:+19556930 | MS.gene031347:CDS |
AACTATTACTGCTGATCTGG+AGG | 0.565893 | 2.1:+19554021 | MS.gene031347:CDS |
GGAGCATTTCCACCCAGTTG+GGG | 0.566321 | 2.1:-19553852 | None:intergenic |
TCCGGAGGATGATAATGTGT+TGG | 0.568706 | 2.1:+19555954 | MS.gene031347:CDS |
GATGCTATATTGCTAGATGC+GGG | 0.569791 | 2.1:+19553728 | MS.gene031347:CDS |
AATGATGCTGATTTATCCGA+TGG | 0.571407 | 2.1:+19561050 | MS.gene031347:CDS |
TCTGGTAGAAGCTCTTCCCC+AGG | 0.573187 | 2.1:-19559932 | None:intergenic |
CACATTATCATCCTCCGGAT+AGG | 0.573405 | 2.1:-19555950 | None:intergenic |
CATCTTGAAAGATGGTAGAT+GGG | 0.575725 | 2.1:+19561373 | MS.gene031347:CDS |
AACAGGGTAGGTTTCTTCAA+AGG | 0.576280 | 2.1:-19552623 | None:intergenic |
CCACTTGGTCAAGAAAATGA+AGG | 0.579718 | 2.1:-19558731 | None:intergenic |
TTTGAAGAAACCTACCCTGT+TGG | 0.582281 | 2.1:+19552625 | MS.gene031347:CDS |
TTTCTTACAACTGCATGTTG+AGG | 0.582850 | 2.1:-19557302 | None:intergenic |
GACTTGGTTACTAGCTCACA+TGG | 0.583662 | 2.1:+19560595 | MS.gene031347:CDS |
GCTGATTTATCCGATGGAGG+AGG | 0.586042 | 2.1:+19561056 | MS.gene031347:CDS |
CAACTCACTTCCTCCTCCAT+CGG | 0.586340 | 2.1:-19561066 | None:intergenic |
TAGAATCCAAGAAAGTGGGC+AGG | 0.591771 | 2.1:+19556934 | MS.gene031347:CDS |
GTAGCAAAGGTCATCAACCT+GGG | 0.592394 | 2.1:+19559915 | MS.gene031347:CDS |
TGATGCTATATTGCTAGATG+CGG | 0.593007 | 2.1:+19553727 | MS.gene031347:CDS |
TATTTCTGAATCATCCTCAA+CGG | 0.593804 | 2.1:-19560462 | None:intergenic |
ACATTGAGAAAGCAACAGAC+TGG | 0.594075 | 2.1:+19560958 | MS.gene031347:CDS |
AGATGCGGGTGCTGAACGGA+AGG | 0.595022 | 2.1:+19553742 | MS.gene031347:CDS |
CATGCGCAAATTTGTTATGG+AGG | 0.598160 | 2.1:+19559741 | MS.gene031347:CDS |
ATGCATCTGTAGGTATTGAT+GGG | 0.598292 | 2.1:+19553465 | MS.gene031347:intron |
TGCATGTTGAGGTCCACAGT+TGG | 0.598934 | 2.1:-19557291 | None:intergenic |
ATTTGATCGGAGCAAATCCA+TGG | 0.599005 | 2.1:-19552252 | None:intergenic |
TTCTCCGGTAATTCCACAGA+AGG | 0.599224 | 2.1:-19553566 | None:intergenic |
GTAGCATATCAACTTTCGAC+TGG | 0.599715 | 2.1:-19560764 | None:intergenic |
CTAGTACATACCTCAACTTG+TGG | 0.600269 | 2.1:-19557659 | None:intergenic |
GAAAGCAGAGAAACTTTCTG+AGG | 0.604681 | 2.1:+19559027 | MS.gene031347:CDS |
GCATTTGGGAAGGATTATGT+GGG | 0.605030 | 2.1:+19552524 | MS.gene031347:CDS |
GTTCCGAGCTTTACAGCGAG+TGG | 0.609506 | 2.1:-19554001 | None:intergenic |
ACCAAACTTGAAACTCCTTG+CGG | 0.609907 | 2.1:-19558787 | None:intergenic |
TTCCGAGCTTTACAGCGAGT+GGG | 0.610350 | 2.1:-19554000 | None:intergenic |
GGCTTCCATTAATCCTCCCA+AGG | 0.611522 | 2.1:+19561421 | MS.gene031347:CDS |
TAATCAGACTGAAATGACTA+CGG | 0.613034 | 2.1:+19556871 | MS.gene031347:intron |
AAAGCTCACCGCAGATGTAG+GGG | 0.614534 | 2.1:-19557779 | None:intergenic |
GAGTAGAAGAGGCAATGACT+TGG | 0.614884 | 2.1:+19560579 | MS.gene031347:CDS |
AAAGCAGAGAAACTTTCTGA+GGG | 0.617857 | 2.1:+19559028 | MS.gene031347:CDS |
GGAAGGAGCAAGTTGCAGCA+TGG | 0.618325 | 2.1:+19553759 | MS.gene031347:CDS |
ATTAATCCTCCCAAGGACAT+GGG | 0.630490 | 2.1:+19561428 | MS.gene031347:CDS |
TGCAAGCTTCTCAGCTCCCG+AGG | 0.630850 | 2.1:+19559193 | MS.gene031347:CDS |
AAACTGAACTGGATCCCGCA+AGG | 0.633426 | 2.1:+19558772 | MS.gene031347:CDS |
AATTTACAGCAAATTGACAA+TGG | 0.637927 | 2.1:+19553818 | MS.gene031347:CDS |
GAACTCGAGAGAGATTTGAT+CGG | 0.641844 | 2.1:-19552265 | None:intergenic |
TCGAAAGGCACTGATAGCAT+CGG | 0.644009 | 2.1:+19560815 | MS.gene031347:CDS |
GGAAGAGCTTCTACCAGATG+GGG | 0.644506 | 2.1:+19559937 | MS.gene031347:CDS |
TGCAAGCACCCCTACATCTG+CGG | 0.644553 | 2.1:+19557771 | MS.gene031347:CDS |
GAGCATTTCCACCCAGTTGG+GGG | 0.645122 | 2.1:-19553851 | None:intergenic |
TTGCATGAAGCAACTAACAA+AGG | 0.649182 | 2.1:+19558891 | MS.gene031347:CDS |
ATTGATGCTCCCATTTCGAG+AGG | 0.654004 | 2.1:+19560720 | MS.gene031347:CDS |
TGCATCTGTAGGTATTGATG+GGG | 0.655166 | 2.1:+19553466 | MS.gene031347:intron |
AGATAGCCCATGTCCTTGGG+AGG | 0.656852 | 2.1:-19561434 | None:intergenic |
GATGCTGATTTATCCGATGG+AGG | 0.658748 | 2.1:+19561053 | MS.gene031347:CDS |
GGCTCCTGCTGATCCAACTG+TGG | 0.659783 | 2.1:+19557278 | MS.gene031347:CDS |
TGAAAATACAGCTTGCATAG+TGG | 0.660206 | 2.1:-19557116 | None:intergenic |
TCTAAAGAAGGCATTTGAGG+AGG | 0.662919 | 2.1:+19557257 | MS.gene031347:CDS |
TTGATGCTCCCATTTCGAGA+GGG | 0.665706 | 2.1:+19560721 | MS.gene031347:CDS |
TGATGAGGTTGTACGTCCAA+GGG | 0.669779 | 2.1:+19559151 | MS.gene031347:CDS |
TGATGCAGTAGCATCCATGT+TGG | 0.673342 | 2.1:-19561009 | None:intergenic |
AAACCTATAGCCAACAGGGT+AGG | 0.677292 | 2.1:-19552635 | None:intergenic |
TCTAGGACGAAACTTGCACA+TGG | 0.681126 | 2.1:+19557611 | MS.gene031347:intron |
GAAGAGCTTCTACCAGATGG+GGG | 0.686244 | 2.1:+19559938 | MS.gene031347:CDS |
GCATAGTAGAAAATTCCGGA+TGG | 0.692803 | 2.1:-19558321 | None:intergenic |
ACACAAACCTATAGCCAACA+GGG | 0.692944 | 2.1:-19552639 | None:intergenic |
GTGTTGCACAGTACCCGTTG+AGG | 0.709727 | 2.1:+19560448 | MS.gene031347:intron |
TAGCAAAGGTCATCAACCTG+GGG | 0.714337 | 2.1:+19559916 | MS.gene031347:CDS |
ATTGGAACCTCAACACACTG+TGG | 0.716074 | 2.1:+19561335 | MS.gene031347:CDS |
ATAGTGACCACAGTGTGTTG+AGG | 0.717985 | 2.1:-19561342 | None:intergenic |
GCATCTGTAGGTATTGATGG+GGG | 0.718341 | 2.1:+19553467 | MS.gene031347:intron |
ATGGAGTGATCCTTTGTGGG+AGG | 0.719607 | 2.1:+19553915 | MS.gene031347:CDS |
TTGGTTACTAGCTCACATGG+AGG | 0.794926 | 2.1:+19560598 | MS.gene031347:CDS |
AGTGTGTTGAGGTTCCAATG+TGG | 0.798651 | 2.1:-19561331 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 19552254 | 19561478 | 19552254 | ID=MS.gene031347 |
chr2.1 | mRNA | 19552254 | 19561478 | 19552254 | ID=MS.gene031347.t1;Parent=MS.gene031347 |
chr2.1 | exon | 19552254 | 19552349 | 19552254 | ID=MS.gene031347.t1.exon1;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19552254 | 19552349 | 19552254 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19552482 | 19552653 | 19552482 | ID=MS.gene031347.t1.exon2;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19552482 | 19552653 | 19552482 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19553477 | 19553589 | 19553477 | ID=MS.gene031347.t1.exon3;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19553477 | 19553589 | 19553477 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19553713 | 19554049 | 19553713 | ID=MS.gene031347.t1.exon4;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19553713 | 19554049 | 19553713 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19555941 | 19556035 | 19555941 | ID=MS.gene031347.t1.exon5;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19555941 | 19556035 | 19555941 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19556878 | 19557011 | 19556878 | ID=MS.gene031347.t1.exon6;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19556878 | 19557011 | 19556878 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19557102 | 19557158 | 19557102 | ID=MS.gene031347.t1.exon7;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19557102 | 19557158 | 19557102 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19557239 | 19557316 | 19557239 | ID=MS.gene031347.t1.exon8;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19557239 | 19557316 | 19557239 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19557616 | 19557670 | 19557616 | ID=MS.gene031347.t1.exon9;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19557616 | 19557670 | 19557616 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19557751 | 19557792 | 19557751 | ID=MS.gene031347.t1.exon10;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19557751 | 19557792 | 19557751 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19558271 | 19558351 | 19558271 | ID=MS.gene031347.t1.exon11;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19558271 | 19558351 | 19558271 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19558714 | 19558912 | 19558714 | ID=MS.gene031347.t1.exon12;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19558714 | 19558912 | 19558714 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19559002 | 19559059 | 19559002 | ID=MS.gene031347.t1.exon13;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19559002 | 19559059 | 19559002 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19559145 | 19559267 | 19559145 | ID=MS.gene031347.t1.exon14;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19559145 | 19559267 | 19559145 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19559699 | 19559787 | 19559699 | ID=MS.gene031347.t1.exon15;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19559699 | 19559787 | 19559699 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19559870 | 19559959 | 19559870 | ID=MS.gene031347.t1.exon16;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19559870 | 19559959 | 19559870 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19560459 | 19560626 | 19560459 | ID=MS.gene031347.t1.exon17;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19560459 | 19560626 | 19560459 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19560718 | 19560836 | 19560718 | ID=MS.gene031347.t1.exon18;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19560718 | 19560836 | 19560718 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19560951 | 19561080 | 19560951 | ID=MS.gene031347.t1.exon19;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19560951 | 19561080 | 19560951 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
chr2.1 | exon | 19561306 | 19561478 | 19561306 | ID=MS.gene031347.t1.exon20;Parent=MS.gene031347.t1 |
chr2.1 | CDS | 19561306 | 19561478 | 19561306 | ID=cds.MS.gene031347.t1;Parent=MS.gene031347.t1 |
Gene Sequence |
Protein sequence |