AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013534


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013534.t1 MTR_7g105080 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene013534.t1 MTR_3g092130 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene013534.t1 MTR_1g059690 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene013534.t1 MTR_3g092130 98.361 122 2 0 1 122 1 122 2.83e-87 250
MS.gene013534.t1 MTR_5g092700 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene013534.t1 MTR_5g092700 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene013534.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene013534.t1 MTR_4g073580 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene013534.t1 MTR_8g088060 100.000 76 0 0 1 76 1 76 1.45e-49 155
MS.gene013534.t1 MTR_5g033960 100.000 76 0 0 1 76 1 76 1.55e-49 155
MS.gene013534.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 3.56e-49 155
MS.gene013534.t1 MTR_4g073580 44.231 104 28 1 3 76 79 182 6.31e-20 80.9
MS.gene013534.t1 MTR_4g088485 98.701 77 1 0 1 77 1 77 4.21e-49 156
MS.gene013534.t1 MTR_4g088485 98.701 77 1 0 1 77 138 214 5.53e-49 155
MS.gene013534.t1 MTR_4g088485 79.221 77 1 1 1 77 77 138 3.49e-34 118
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 1 77 4.74e-49 156
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 77 153 4.74e-49 156
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 153 229 6.35e-49 156
MS.gene013534.t1 MTR_1g066390 98.701 77 1 0 1 77 1 77 5.54e-49 156
MS.gene013534.t1 MTR_1g066390 98.701 77 1 0 1 77 77 153 5.54e-49 156
MS.gene013534.t1 MTR_1g066390 100.000 76 0 0 1 76 153 228 8.47e-49 156
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.27e-48 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.27e-48 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.27e-48 157
MS.gene013534.t1 MTR_4g080920 97.403 77 2 0 1 77 77 153 1.39e-48 155
MS.gene013534.t1 MTR_4g080920 97.403 77 2 0 1 77 1 77 2.56e-48 154
MS.gene013534.t1 MTR_4g080920 69.737 76 23 0 1 76 153 228 5.76e-30 107
MS.gene013534.t1 MTR_6g061930 98.701 77 1 0 1 77 1 77 2.73e-48 156
MS.gene013534.t1 MTR_6g061930 98.701 77 1 0 1 77 77 153 2.73e-48 156
MS.gene013534.t1 MTR_6g061930 98.701 77 1 0 1 77 214 290 3.61e-48 156
MS.gene013534.t1 MTR_6g061930 76.623 77 3 1 1 77 153 214 1.26e-31 113
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 49 125 3.06e-48 156
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 125 201 3.06e-48 156
MS.gene013534.t1 MTR_7g116360 98.701 77 1 0 1 77 201 277 3.97e-48 155
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 3.19e-48 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 3.19e-48 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 3.19e-48 157
MS.gene013534.t1 MTR_4g081010 100.000 76 0 0 1 76 229 304 4.81e-48 156
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 4.89e-48 155
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 4.89e-48 155
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 4.89e-48 155
MS.gene013534.t1 MTR_8g081020 98.701 77 1 0 1 77 1 77 1.76e-47 157
MS.gene013534.t1 MTR_8g081020 98.701 77 1 0 1 77 77 153 1.76e-47 157
MS.gene013534.t1 MTR_8g081020 98.701 77 1 0 1 77 153 229 1.76e-47 157
MS.gene013534.t1 MTR_8g081020 98.701 77 1 0 1 77 229 305 1.76e-47 157
MS.gene013534.t1 MTR_8g081020 100.000 76 0 0 1 76 305 380 2.65e-47 156
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 1.78e-47 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 1.78e-47 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 1.78e-47 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 1.78e-47 157
MS.gene013534.t1 MTR_4g081010 100.000 76 0 0 1 76 305 380 2.68e-47 156
MS.gene013534.t1 MTR_4g080797 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene013534.t1 MTR_4g080797 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene013534.t1 MTR_4g080797 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene013534.t1 MTR_4g080797 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene013534.t1 MTR_4g080797 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene013534.t1 MTR_4g091580 97.403 77 2 0 1 77 229 305 5.42e-47 155
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 305 381 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 98.701 77 1 0 1 77 381 457 2.44e-46 157
MS.gene013534.t1 MTR_4g081010 100.000 76 0 0 1 76 457 532 3.63e-46 156
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 2.52e-46 157
MS.gene013534.t1 MTR_8g018230 98.701 77 1 0 1 77 457 533 3.37e-46 156
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 2.65e-46 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 2.65e-46 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 2.65e-46 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 229 305 2.65e-46 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 381 457 2.65e-46 157
MS.gene013534.t1 MTR_4g091580 98.701 77 1 0 1 77 457 533 3.55e-46 156
MS.gene013534.t1 MTR_4g091580 96.104 77 3 0 1 77 305 381 1.00e-44 152
MS.gene013534.t1 MTR_8g479250 96.104 77 3 0 1 77 141 217 1.09e-45 150
MS.gene013534.t1 MTR_8g479250 76.389 72 6 1 1 72 217 277 6.83e-27 101
MS.gene013534.t1 MTR_8g479250 100.000 41 0 0 1 41 1 41 1.21e-20 85.1
MS.gene013534.t1 MTR_8g479250 91.429 35 3 0 43 77 107 141 1.11e-14 68.9
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 77 153 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 153 229 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 229 305 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 305 381 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 381 457 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 457 533 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 533 609 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 609 685 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 685 761 2.16e-45 157
MS.gene013534.t1 MTR_4g088495 98.701 77 1 0 1 77 761 837 2.88e-45 156
MS.gene013534.t1 MTR_4g088495 97.403 77 2 0 1 77 1 77 4.96e-44 153
MS.gene013534.t1 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.01e-28 105
MS.gene013534.t1 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.09e-27 103
MS.gene013534.t1 MTR_5g076660 69.863 73 22 0 1 73 266 338 8.62e-27 102
MS.gene013534.t1 MTR_5g067400 68.421 76 24 0 1 76 241 316 1.74e-25 98.2
MS.gene013534.t1 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.97e-25 90.9
MS.gene013534.t1 MTR_5g076370 64.384 73 26 0 1 73 267 339 3.83e-23 92.4
MS.gene013534.t1 MTR_2g038430 61.333 75 29 0 1 75 268 342 5.57e-23 92.0
MS.gene013534.t1 MTR_5g076505 61.333 75 29 0 1 75 240 314 8.04e-23 90.9
MS.gene013534.t1 MTR_1g046650 57.895 76 32 0 1 76 171 246 3.44e-22 88.2
MS.gene013534.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 4.89e-22 89.0
MS.gene013534.t1 MTR_5g076720 65.333 75 26 0 1 75 315 389 6.25e-22 89.4
MS.gene013534.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 6.95e-22 88.6
MS.gene013534.t1 MTR_1g046650 57.895 76 32 0 1 76 271 346 9.51e-22 88.6
MS.gene013534.t1 MTR_5g076740 59.211 76 30 1 1 75 86 161 1.13e-21 84.7
MS.gene013534.t1 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.35e-21 88.2
MS.gene013534.t1 MTR_7g094390 58.667 75 31 0 1 75 402 476 8.93e-21 86.7
MS.gene013534.t1 MTR_5g076520 57.333 75 31 1 1 74 244 318 3.43e-19 81.3
MS.gene013534.t1 MTR_7g024290 60.526 76 29 1 1 75 241 316 8.99e-19 80.1
MS.gene013534.t1 MTR_4g009980 55.224 67 30 0 9 75 4 70 5.06e-18 72.8
MS.gene013534.t1 MTR_5g061290 53.333 75 35 0 1 75 252 326 6.95e-18 77.8
MS.gene013534.t1 MTR_5g079360 70.213 47 14 0 50 96 9 55 4.53e-17 70.1
MS.gene013534.t1 MTR_5g076350 48.684 76 38 1 1 75 8 83 1.16e-15 67.4
MS.gene013534.t1 MTR_5g076760 59.649 57 23 0 11 67 5 61 4.47e-15 65.9
MS.gene013534.t1 MTR_5g076780 58.333 60 25 0 15 74 4 63 5.66e-15 65.1
MS.gene013534.t1 MTR_5g076340 50.649 77 36 2 1 75 9 85 1.24e-14 64.7
MS.gene013534.t1 MTR_4g080783 76.471 34 8 0 44 77 7 40 6.78e-12 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013534.t1 AT3G52590 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene013534.t1 AT2G36170 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene013534.t1 AT2G35635 100.000 76 0 0 1 76 1 76 9.81e-50 155
MS.gene013534.t1 AT2G35635 60.526 76 30 0 3 78 79 154 2.00e-26 96.7
MS.gene013534.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene013534.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene013534.t1 AT1G31340 100.000 76 0 0 1 76 1 76 1.51e-49 155
MS.gene013534.t1 AT1G31340 62.667 75 28 0 3 77 79 153 5.16e-27 98.6
MS.gene013534.t1 AT3G62250 100.000 76 0 0 1 76 1 76 1.70e-49 155
MS.gene013534.t1 AT1G23410 100.000 76 0 0 1 76 1 76 1.71e-49 155
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene013534.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene013534.t1 AT1G55060 97.403 77 2 0 1 77 77 153 1.90e-48 155
MS.gene013534.t1 AT1G55060 97.368 76 2 0 1 76 153 228 2.46e-46 149
MS.gene013534.t1 AT1G55060 85.714 77 11 0 1 77 1 77 2.30e-42 139
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene013534.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene013534.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene013534.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene013534.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene013534.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene013534.t1 AT5G20620 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene013534.t1 AT1G65350 98.701 77 1 0 1 77 1 77 6.13e-48 156
MS.gene013534.t1 AT1G65350 97.403 77 2 0 1 77 152 228 9.26e-47 153
MS.gene013534.t1 AT1G65350 97.403 77 1 1 1 77 77 152 6.86e-45 148
MS.gene013534.t1 AT1G65350 80.000 90 4 1 1 76 228 317 6.05e-39 133
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 1 77 1.97e-47 157
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 77 153 1.97e-47 157
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 153 229 1.97e-47 157
MS.gene013534.t1 AT5G20620 98.701 77 1 0 1 77 229 305 1.97e-47 157
MS.gene013534.t1 AT5G20620 100.000 76 0 0 1 76 305 380 2.96e-47 156
MS.gene013534.t1 AT5G37640 96.104 77 3 0 1 77 79 155 4.64e-47 154
MS.gene013534.t1 AT5G37640 92.208 77 6 0 1 77 155 231 6.93e-43 143
MS.gene013534.t1 AT5G37640 92.208 77 5 1 1 76 231 307 8.36e-41 138
MS.gene013534.t1 AT5G37640 77.922 77 17 0 1 77 3 79 5.00e-34 120
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene013534.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene013534.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene013534.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene013534.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene013534.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene013534.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene013534.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene013534.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene013534.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene013534.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene013534.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene013534.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene013534.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene013534.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene013534.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene013534.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene013534.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene013534.t1 AT1G53930 75.342 73 18 0 1 73 86 158 6.40e-33 113
MS.gene013534.t1 AT1G53950 61.972 71 27 0 1 71 69 139 2.72e-25 93.6
MS.gene013534.t1 AT1G11980 55.263 76 34 0 1 76 1 76 2.81e-24 89.0
MS.gene013534.t1 AT1G53945 46.269 67 36 0 1 67 46 112 7.40e-13 61.2
MS.gene013534.t1 AT4G12570 38.667 75 45 1 1 74 95 169 4.20e-12 62.4
MS.gene013534.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6
MS.gene013534.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6

Find 36 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCAGAAATTAACCTTTC+TGG 0.099822 3.4:-84319364 None:intergenic
TCCATCTTCCAACTGCTTTC+CGG 0.264402 3.4:-84319318 None:intergenic
CTTATCCTGGTTATACTTCC+TGG 0.288777 3.4:-84319565 None:intergenic
GTCTACTTGATCTTCTTCTT+TGG 0.291217 3.4:-84321121 None:intergenic
AAGATCAACCTCTGCTGGTC+CGG 0.328982 3.4:-84319293 None:intergenic
CTCAAGGGTGATAGTCTTGC+CGG 0.357525 3.4:-84319111 None:intergenic
AATCATTGAGCCTTCTTTGA+TGG 0.363914 3.4:+84319536 MS.gene013534:CDS
CAACGTCAAAGCTAAGATTC+AGG 0.397707 3.4:+84319157 MS.gene013534:CDS
AGATCAACCTCTGCTGGTCC+GGG 0.424083 3.4:-84319292 None:intergenic
CTTCTTTGATGGCGTTGGCC+AGG 0.452976 3.4:+84319547 MS.gene013534:CDS
CGGCGAAGATCAACCTCTGC+TGG 0.466798 3.4:-84319298 None:intergenic
TGAGCCTTCTTTGATGGCGT+TGG 0.490761 3.4:+84319542 MS.gene013534:CDS
CTGGCCAACGCCATCAAAGA+AGG 0.492085 3.4:-84319546 None:intergenic
TGCGGCAGATAGTCTTATCC+TGG 0.502333 3.4:-84319578 None:intergenic
GCCGGAAAGCAGTTGGAAGA+TGG 0.509801 3.4:+84319317 MS.gene013534:CDS
TTCCTGCAGTTGACAGCACG+AGG 0.524526 3.4:-84320970 None:intergenic
GGTGATAGTCTTGCCGGTGA+GGG 0.538859 3.4:-84319105 None:intergenic
GCTAAGATTCAGGATAAAGA+AGG 0.540669 3.4:+84319167 MS.gene013534:CDS
CAGCAGAGGTTGATCTTCGC+CGG 0.541092 3.4:+84319299 MS.gene013534:CDS
ACCCTCGTGCTGTCAACTGC+AGG 0.545009 3.4:+84320968 MS.gene013534:CDS
GATCTTCGCCGGAAAGCAGT+TGG 0.546373 3.4:+84319310 MS.gene013534:CDS
GGGTGATAGTCTTGCCGGTG+AGG 0.566343 3.4:-84319106 None:intergenic
CTGGATGTTGTAGTCAGCAA+GGG 0.569635 3.4:-84319345 None:intergenic
TGTCGCTTGACTCCACCTCA+AGG 0.574617 3.4:-84319127 None:intergenic
ATCAACCTCTGCTGGTCCGG+GGG 0.575505 3.4:-84319290 None:intergenic
ATCTTCGTGAAAACCCTCAC+CGG 0.581247 3.4:+84319092 MS.gene013534:CDS
TCTGGATGTTGTAGTCAGCA+AGG 0.585018 3.4:-84319346 None:intergenic
GTTGGCCAGGAAGTATAACC+AGG 0.589917 3.4:+84319560 MS.gene013534:CDS
GATCAACCTCTGCTGGTCCG+GGG 0.600001 3.4:-84319291 None:intergenic
CAAGACTATCACCCTTGAGG+TGG 0.603784 3.4:+84319115 MS.gene013534:CDS
CAATTGTTTAGGAATTCCCC+CGG 0.609118 3.4:+84319274 MS.gene013534:intron
GTCGCTTGACTCCACCTCAA+GGG 0.609137 3.4:-84319126 None:intergenic
GCTGACTACAACATCCAGAA+AGG 0.625044 3.4:+84319350 MS.gene013534:CDS
GAAGTGCGGACACAGCAACC+AGG 0.663806 3.4:+84320996 MS.gene013534:CDS
CGGCAAGACTATCACCCTTG+AGG 0.665715 3.4:+84319112 MS.gene013534:CDS
TCCTGCAGTTGACAGCACGA+GGG 0.675676 3.4:-84320969 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTATTTAGTCTTAA+TGG + chr3.4:84321071-84321090 MS.gene013534:intron 10.0%
!! TAATAAAAACTTACTTCATT+TGG - chr3.4:84320004-84320023 None:intergenic 15.0%
!!! AGTAAAATAATCTCTTTTTA+TGG - chr3.4:84320575-84320594 None:intergenic 15.0%
!!! ATAAAAAGAGATTATTTTAC+TGG + chr3.4:84320574-84320593 MS.gene013534:intron 15.0%
!! AAAATAATAGTAATTGCCTA+GGG + chr3.4:84320739-84320758 MS.gene013534:intron 20.0%
!! AAATAGTTAATATATGGGAT+AGG + chr3.4:84320136-84320155 MS.gene013534:intron 20.0%
!! AATCATCTGAATGTTTAAAA+AGG + chr3.4:84319872-84319891 MS.gene013534:intron 20.0%
!! ATCCCATATATTAACTATTT+GGG - chr3.4:84320136-84320155 None:intergenic 20.0%
!! CAGAATAATACAATATAACT+AGG - chr3.4:84320824-84320843 None:intergenic 20.0%
!! TATAAATAGAATTTCTGTCT+TGG - chr3.4:84320073-84320092 None:intergenic 20.0%
!! TATCCCATATATTAACTATT+TGG - chr3.4:84320137-84320156 None:intergenic 20.0%
!! TTATAATTGCCATCTATTAT+TGG + chr3.4:84320865-84320884 MS.gene013534:intron 20.0%
!! TTTCTTTCTTTCAATTGTTT+AGG + chr3.4:84319263-84319282 MS.gene013534:intron 20.0%
!!! CCAAGGTATTTAAATATAAA+AGG - chr3.4:84320252-84320271 None:intergenic 20.0%
!!! CCTTTTATATTTAAATACCT+TGG + chr3.4:84320249-84320268 MS.gene013534:intron 20.0%
!!! GGTTTTATGTTAAAATAGTT+AGG + chr3.4:84319940-84319959 MS.gene013534:intron 20.0%
!!! TATAAAAGGTATTGTTATCA+CGG - chr3.4:84320238-84320257 None:intergenic 20.0%
!!! TTAAAAAGGTTACTTTTCTT+TGG + chr3.4:84319886-84319905 MS.gene013534:intron 20.0%
! AAAAGAGAAAAAAATGGATC+TGG - chr3.4:84319212-84319231 None:intergenic 25.0%
! AAATAATAGTAATTGCCTAG+GGG + chr3.4:84320740-84320759 MS.gene013534:intron 25.0%
! AACACTTTAGACTTTAGTTA+AGG + chr3.4:84319764-84319783 MS.gene013534:intron 25.0%
! AATTCAGAAATTAACCTTTC+TGG - chr3.4:84319367-84319386 None:intergenic 25.0%
! ACTTCTGATTACATTGAATT+AGG + chr3.4:84320420-84320439 MS.gene013534:intron 25.0%
! AGACCCAAATAGTTAATATA+TGG + chr3.4:84320130-84320149 MS.gene013534:intron 25.0%
! ATAGTATCACATAAGATGTA+GGG - chr3.4:84320794-84320813 None:intergenic 25.0%
! CAAAATAATAGTAATTGCCT+AGG + chr3.4:84320738-84320757 MS.gene013534:intron 25.0%
! GAAGGAAAAAGAGAAAAAAA+TGG - chr3.4:84319218-84319237 None:intergenic 25.0%
! GACCCAAATAGTTAATATAT+GGG + chr3.4:84320131-84320150 MS.gene013534:intron 25.0%
! GATTCATACAATATGAAGTA+TGG - chr3.4:84320510-84320529 None:intergenic 25.0%
! TATAGTATCACATAAGATGT+AGG - chr3.4:84320795-84320814 None:intergenic 25.0%
!! ATTAATGTTTGAAACCTATC+TGG + chr3.4:84320604-84320623 MS.gene013534:intron 25.0%
!! ATTTTGCAAATGAATACCTT+TGG - chr3.4:84320724-84320743 None:intergenic 25.0%
!! GTCAACAACAATAAGATTTT+GGG - chr3.4:84320453-84320472 None:intergenic 25.0%
!!! TATTTTTTGTATTGCAGTTG+AGG + chr3.4:84321098-84321117 MS.gene013534:intron 25.0%
AAGATTTCATTCAATACGAC+AGG - chr3.4:84321043-84321062 None:intergenic 30.0%
AATAATAGTAATTGCCTAGG+GGG + chr3.4:84320741-84320760 MS.gene013534:intron 30.0%
ACAATTATAAGTAAGCACAC+TGG - chr3.4:84320922-84320941 None:intergenic 30.0%
ATCAAACAAAAACGAATCGA+AGG - chr3.4:84319236-84319255 None:intergenic 30.0%
GATGGCAATTATAATTCAAG+TGG - chr3.4:84320859-84320878 None:intergenic 30.0%
TGCAATAAGTGCAAATTCAT+AGG + chr3.4:84319919-84319938 MS.gene013534:intron 30.0%
TTAGACTTTAGTTAAGGTTC+AGG + chr3.4:84319770-84319789 MS.gene013534:intron 30.0%
! AATGATGGTTTTCTTCAGTT+TGG + chr3.4:84320179-84320198 MS.gene013534:intron 30.0%
! AGTTCATACATCTGTTGTTT+CGG - chr3.4:84320326-84320345 None:intergenic 30.0%
! CGTCAACAACAATAAGATTT+TGG - chr3.4:84320454-84320473 None:intergenic 30.0%
! TTCAATGTAATCAGAAGTGT+CGG - chr3.4:84320418-84320437 None:intergenic 30.0%
! TTGTGTTATTGGTATTGGAT+TGG + chr3.4:84319624-84319643 MS.gene013534:intron 30.0%
!!! ACACATGATTTTGAAACCAA+AGG + chr3.4:84320705-84320724 MS.gene013534:intron 30.0%
!!! TCAGGTTGTACTTTTTTTTG+AGG + chr3.4:84319788-84319807 MS.gene013534:intron 30.0%
AATCATTGAGCCTTCTTTGA+TGG + chr3.4:84319536-84319555 MS.gene013534:CDS 35.0%
AATGACTCTTGTCTGAATTG+GGG + chr3.4:84319449-84319468 MS.gene013534:intron 35.0%
AGATTGTGCAAACTTACTTG+CGG - chr3.4:84319599-84319618 None:intergenic 35.0%
CACAAAATCTCAATCCAGAT+AGG - chr3.4:84320621-84320640 None:intergenic 35.0%
CACATCTTCGTTCAAACAAT+TGG + chr3.4:84320529-84320548 MS.gene013534:intron 35.0%
GAATGACTCTTGTCTGAATT+GGG + chr3.4:84319448-84319467 MS.gene013534:intron 35.0%
GAGCACTAAAATCATGTCAA+AGG - chr3.4:84319832-84319851 None:intergenic 35.0%
GCAAAATATCAACACAACCA+AGG - chr3.4:84320269-84320288 None:intergenic 35.0%
GCTAAGATTCAGGATAAAGA+AGG + chr3.4:84319167-84319186 MS.gene013534:CDS 35.0%
TACTTATAATTGTGCTGTGC+AGG + chr3.4:84320929-84320948 MS.gene013534:intron 35.0%
TGAATGACTCTTGTCTGAAT+TGG + chr3.4:84319447-84319466 MS.gene013534:intron 35.0%
TGGATCTGGTTATTTGAGTA+AGG - chr3.4:84319198-84319217 None:intergenic 35.0%
TTGCCATCTATTATTGGAAG+CGG + chr3.4:84320871-84320890 MS.gene013534:intron 35.0%
! GAAAACCATCATTTTCGATG+AGG - chr3.4:84320172-84320191 None:intergenic 35.0%
!! ACTATTTGGGTCTTGTTAAC+CGG - chr3.4:84320123-84320142 None:intergenic 35.0%
!! GGTTGTGTTGATATTTTGCT+GGG + chr3.4:84320270-84320289 MS.gene013534:intron 35.0%
!! TGGTTGTGTTGATATTTTGC+TGG + chr3.4:84320269-84320288 MS.gene013534:intron 35.0%
!!! CAACTTTGCATCTTGTTTTG+AGG + chr3.4:84319502-84319521 MS.gene013534:CDS 35.0%
AACTGCAGGAAAAAGAAGTG+CGG + chr3.4:84320982-84321001 MS.gene013534:CDS 40.0%
AAGTGATAGAACACTGTACC+TGG - chr3.4:84321017-84321036 None:intergenic 40.0%
CAACGTCAAAGCTAAGATTC+AGG + chr3.4:84319157-84319176 MS.gene013534:CDS 40.0%
CAATTGTTTAGGAATTCCCC+CGG + chr3.4:84319274-84319293 MS.gene013534:intron 40.0%
CACACGTAAGCAGATATCTA+AGG - chr3.4:84320675-84320694 None:intergenic 40.0%
CTTATCCTGGTTATACTTCC+TGG - chr3.4:84319568-84319587 None:intergenic 40.0%
GCAAGTAAGTTTGCACAATC+TGG + chr3.4:84319598-84319617 MS.gene013534:intron 40.0%
TGCCATCTATTATTGGAAGC+GGG + chr3.4:84320872-84320891 MS.gene013534:intron 40.0%
TTGGCATGGCATACACTTAT+AGG + chr3.4:84320198-84320217 MS.gene013534:intron 40.0%
! GGCTCTTGTGTTATTGGTAT+TGG + chr3.4:84319619-84319638 MS.gene013534:intron 40.0%
! TGGTTTTCTTCAGTTTGGCA+TGG + chr3.4:84320184-84320203 MS.gene013534:intron 40.0%
! TTTTCCTACAGTTGTCAACG+AGG - chr3.4:84319854-84319873 None:intergenic 40.0%
!! CAATCTGGCTCTTGTGTTAT+TGG + chr3.4:84319613-84319632 MS.gene013534:intron 40.0%
!! TGGAACAGTTCTAAGACAGT+TGG - chr3.4:84320555-84320574 None:intergenic 40.0%
AGAATGTTAACCAGTGCACC+CGG + chr3.4:84319963-84319982 MS.gene013534:intron 45.0%
ATCTTCGTGAAAACCCTCAC+CGG + chr3.4:84319092-84319111 MS.gene013534:CDS 45.0%
ATTCGTGTCAATGTCGTGTC+TGG + chr3.4:84320475-84320494 MS.gene013534:intron 45.0%
CACAGCCTCATCGAAAATGA+TGG + chr3.4:84320164-84320183 MS.gene013534:intron 45.0%
CTGGATGTTGTAGTCAGCAA+GGG - chr3.4:84319348-84319367 None:intergenic 45.0%
GCCATCTATTATTGGAAGCG+GGG + chr3.4:84320873-84320892 MS.gene013534:intron 45.0%
GCTGACTACAACATCCAGAA+AGG + chr3.4:84319350-84319369 MS.gene013534:CDS 45.0%
GGTATTGTTATCACGGAACG+AGG - chr3.4:84320231-84320250 None:intergenic 45.0%
TCCATCTTCCAACTGCTTTC+CGG - chr3.4:84319321-84319340 None:intergenic 45.0%
TCTGGATGTTGTAGTCAGCA+AGG - chr3.4:84319349-84319368 None:intergenic 45.0%
! TTTGAGGCACATACCCTTGT+TGG + chr3.4:84319804-84319823 MS.gene013534:intron 45.0%
!! CATGTCAAAGGCACCAACAA+GGG - chr3.4:84319820-84319839 None:intergenic 45.0%
!! TCATGTCAAAGGCACCAACA+AGG - chr3.4:84319821-84319840 None:intergenic 45.0%
!!! CATCTTGTTTTGAGGCTTCG+TGG + chr3.4:84319510-84319529 MS.gene013534:CDS 45.0%
AAGATCAACCTCTGCTGGTC+CGG - chr3.4:84319296-84319315 None:intergenic 50.0%
AATGTTAACCAGTGCACCCG+GGG + chr3.4:84319965-84319984 MS.gene013534:intron 50.0%
AGATTCCTTAACCAGTGCCC+CGG + chr3.4:84320092-84320111 MS.gene013534:intron 50.0%
CAAGACTATCACCCTTGAGG+TGG + chr3.4:84319115-84319134 MS.gene013534:CDS 50.0%
GAATGTTAACCAGTGCACCC+GGG + chr3.4:84319964-84319983 MS.gene013534:intron 50.0%
GCCCCGCTTCCAATAATAGA+TGG - chr3.4:84320877-84320896 None:intergenic 50.0%
TGCTCCTCGTTGACAACTGT+AGG + chr3.4:84319847-84319866 MS.gene013534:intron 50.0%
! CTCAAGGGTGATAGTCTTGC+CGG - chr3.4:84319114-84319133 None:intergenic 50.0%
! GTTGGCCAGGAAGTATAACC+AGG + chr3.4:84319560-84319579 MS.gene013534:CDS 50.0%
! TTGGTGCTTAACCAATGCCC+CGG - chr3.4:84319985-84320004 None:intergenic 50.0%
!! TGAGCCTTCTTTGATGGCGT+TGG + chr3.4:84319542-84319561 MS.gene013534:CDS 50.0%
!! TGCGGCAGATAGTCTTATCC+TGG - chr3.4:84319581-84319600 None:intergenic 50.0%
!!! CTTGTTTTGAGGCTTCGTGG+TGG + chr3.4:84319513-84319532 MS.gene013534:CDS 50.0%
ACAGTACACGAGTCGGACAG+CGG - chr3.4:84320384-84320403 None:intergenic 55.0%
AGATCAACCTCTGCTGGTCC+GGG - chr3.4:84319295-84319314 None:intergenic 55.0%
ATTCCTTAACCAGTGCCCCG+GGG + chr3.4:84320094-84320113 MS.gene013534:intron 55.0%
CGGCAAGACTATCACCCTTG+AGG + chr3.4:84319112-84319131 MS.gene013534:CDS 55.0%
CTGGCCAACGCCATCAAAGA+AGG - chr3.4:84319549-84319568 None:intergenic 55.0%
GATCTTCGCCGGAAAGCAGT+TGG + chr3.4:84319310-84319329 MS.gene013534:CDS 55.0%
GATTCCTTAACCAGTGCCCC+GGG + chr3.4:84320093-84320112 MS.gene013534:intron 55.0%
GCCGGAAAGCAGTTGGAAGA+TGG + chr3.4:84319317-84319336 MS.gene013534:CDS 55.0%
GCGTCTGACAGTACACGAGT+CGG - chr3.4:84320391-84320410 None:intergenic 55.0%
GTCGCTTGACTCCACCTCAA+GGG - chr3.4:84319129-84319148 None:intergenic 55.0%
TCCTCTAACATGCACCCCCT+AGG - chr3.4:84320758-84320777 None:intergenic 55.0%
TCCTGCAGTTGACAGCACGA+GGG - chr3.4:84320972-84320991 None:intergenic 55.0%
TGGTGCTTAACCAATGCCCC+GGG - chr3.4:84319984-84320003 None:intergenic 55.0%
TTCCTGCAGTTGACAGCACG+AGG - chr3.4:84320973-84320992 None:intergenic 55.0%
! CAGCAGAGGTTGATCTTCGC+CGG + chr3.4:84319299-84319318 MS.gene013534:CDS 55.0%
! GGTGATAGTCTTGCCGGTGA+GGG - chr3.4:84319108-84319127 None:intergenic 55.0%
! TGTCGCTTGACTCCACCTCA+AGG - chr3.4:84319130-84319149 None:intergenic 55.0%
!! CTTCTTTGATGGCGTTGGCC+AGG + chr3.4:84319547-84319566 MS.gene013534:CDS 55.0%
ACCCTCGTGCTGTCAACTGC+AGG + chr3.4:84320968-84320987 MS.gene013534:CDS 60.0%
ATCAACCTCTGCTGGTCCGG+GGG - chr3.4:84319293-84319312 None:intergenic 60.0%
CAGTACACGAGTCGGACAGC+GGG - chr3.4:84320383-84320402 None:intergenic 60.0%
CGGCGAAGATCAACCTCTGC+TGG - chr3.4:84319301-84319320 None:intergenic 60.0%
GAAGTGCGGACACAGCAACC+AGG + chr3.4:84320996-84321015 MS.gene013534:CDS 60.0%
GATCAACCTCTGCTGGTCCG+GGG - chr3.4:84319294-84319313 None:intergenic 60.0%
TCTTGTTAACCGGTGCCCCC+GGG - chr3.4:84320113-84320132 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr3.4:84320095-84320114 MS.gene013534:intron 60.0%
! GCCTAGGGGGTGCATGTTAG+AGG + chr3.4:84320754-84320773 MS.gene013534:intron 60.0%
! GGGTGATAGTCTTGCCGGTG+AGG - chr3.4:84319109-84319128 None:intergenic 60.0%
! GTCTTGTTAACCGGTGCCCC+CGG - chr3.4:84320114-84320133 None:intergenic 60.0%
AACCAATGCCCCGGGTGCAC+TGG - chr3.4:84319976-84319995 None:intergenic 65.0%
AACCAGTGCACCCGGGGCAT+TGG + chr3.4:84319971-84319990 MS.gene013534:intron 65.0%
CTTGTTAACCGGTGCCCCCG+GGG - chr3.4:84320112-84320131 None:intergenic 65.0%
GAATTCCCCCGGACCAGCAG+AGG + chr3.4:84319285-84319304 MS.gene013534:CDS 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr3.4:84320100-84320119 None:intergenic 70.0%
! AACCAGTGCCCCGGGGGCAC+CGG + chr3.4:84320101-84320120 MS.gene013534:intron 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - chr3.4:84320106-84320125 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 84319086 84321141 84319086 ID=MS.gene013534
chr3.4 mRNA 84319086 84321141 84319086 ID=MS.gene013534.t1;Parent=MS.gene013534
chr3.4 exon 84319086 84319188 84319086 ID=MS.gene013534.t1.exon1;Parent=MS.gene013534.t1
chr3.4 CDS 84319086 84319188 84319086 ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1
chr3.4 exon 84319285 84319371 84319285 ID=MS.gene013534.t1.exon2;Parent=MS.gene013534.t1
chr3.4 CDS 84319285 84319371 84319285 ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1
chr3.4 exon 84319499 84319601 84319499 ID=MS.gene013534.t1.exon3;Parent=MS.gene013534.t1
chr3.4 CDS 84319499 84319601 84319499 ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1
chr3.4 exon 84320951 84321017 84320951 ID=MS.gene013534.t1.exon4;Parent=MS.gene013534.t1
chr3.4 CDS 84320951 84321017 84320951 ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1
chr3.4 exon 84321115 84321141 84321115 ID=MS.gene013534.t1.exon5;Parent=MS.gene013534.t1
chr3.4 CDS 84321115 84321141 84321115 ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1
Gene Sequence

>MS.gene013534

ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCAAGCGACACTATCGACAACGTCAAAGCTAAGATTCAGGATAAAGAAGGTTCGTCCTTACTCAAATAACCAGATCCATTTTTTTCTCTTTTTCCTTCGATTCGTTTTTGTTTGATTCATTTGTTTCTTTCTTTCAATTGTTTAGGAATTCCCCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACCCTTGCTGACTACAACATCCAGAAAGGTTAATTTCTGAATTTCATGTTTTTGAGAAATTTTATTTGATATGCTTGTTTAGATTGAATGTTATTAGTTACGTTGAATGACTCTTGTCTGAATTGGGGTTTATGAGATCTTTTTTGATTTTACAGAATCAACTTTGCATCTTGTTTTGAGGCTTCGTGGTGGAATCATTGAGCCTTCTTTGATGGCGTTGGCCAGGAAGTATAACCAGGATAAGACTATCTGCCGCAAGTAAGTTTGCACAATCTGGCTCTTGTGTTATTGGTATTGGATTGGATTTTGATGTGCAAGCAGTTGTATTTTGTTAATTCAAAAAGAAGTAATTGCAAATGTAGTTCTTATGTTCTGAATAACTAGTTTGATGATTGATGTGTAATAAAATTTGCTAAAATGAACACTTTAGACTTTAGTTAAGGTTCAGGTTGTACTTTTTTTTGAGGCACATACCCTTGTTGGTGCCTTTGACATGATTTTAGTGCTCCTCGTTGACAACTGTAGGAAAATCATCTGAATGTTTAAAAAGGTTACTTTTCTTTGGCACTATGTTTTGCAATAAGTGCAAATTCATAGGTTTTATGTTAAAATAGTTAGGAGAATGTTAACCAGTGCACCCGGGGCATTGGTTAAGCACCAAATGAAGTAAGTTTTTATTAAAAAGTAATGTAATTATTACTTGATAAAAAGTGACAGTTTATATTTCCAAGACAGAAATTCTATTTATAGATTCCTTAACCAGTGCCCCGGGGGCACCGGTTAACAAGACCCAAATAGTTAATATATGGGATAGGAAGAACACAGCCTCATCGAAAATGATGGTTTTCTTCAGTTTGGCATGGCATACACTTATAGGTTCTTCTCCTCGTTCCGTGATAACAATACCTTTTATATTTAAATACCTTGGTTGTGTTGATATTTTGCTGGGCATAAATTTAGACTAAGAGCTAGAATATTTCCGAAACAACAGATGTATGAACTCTGTTTGCACATACACTTCTGATTGAAAACGTGTCCCGCTGTCCGACTCGTGTACTGTCAGACGCGACACCGACACTTCTGATTACATTGAATTAGGTCATTTTCCCAAAATCTTATTGTTGTTGACGTATTCGTGTCAATGTCGTGTCTGGTGTCTGTGTCCATACTTCATATTGTATGAATCACATCTTCGTTCAAACAATTGGCCAACTGTCTTAGAACTGTTCCATAAAAAGAGATTATTTTACTGGCAAATCTATTAATGTTTGAAACCTATCTGGATTGAGATTTTGTGACTTAAGCATTCAATTCAGTAAATTGTATTGCCTTAGATATCTGCTTACGTGTGAACTTCAAAAACACATGATTTTGAAACCAAAGGTATTCATTTGCAAAATAATAGTAATTGCCTAGGGGGTGCATGTTAGAGGATAAATATTAGATACCCTACATCTTATGTGATACTATATGATTACCTAGTTATATTGTATTATTCTGTTCAATGTCAGACCACTTGAATTATAATTGCCATCTATTATTGGAAGCGGGGCTAATCTACATTGATGTGTACAACCAGTGTGCTTACTTATAATTGTGCTGTGCAGGTGCTATGCACGTTTACACCCTCGTGCTGTCAACTGCAGGAAAAAGAAGTGCGGACACAGCAACCAGGTACAGTGTTCTATCACTTGCGCCTGTCGTATTGAATGAAATCTTGCAAGTTGTTATTATTATTTAGTCTTAATGGATTATATTTTTTGTATTGCAGTTGAGGCCAAAGAAGAAGATCAAGTAG

Protein sequence

>MS.gene013534.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK