Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013534.t1 | EYU19679.1 | 100 | 128 | 0 | 0 | 1 | 128 | 44 | 171 | 3.20E-64 | 254.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013534.t1 | P49636 | 98.4 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 8.5e-66 | 250.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013534.t1 | A0A251UKK8 | 100.0 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 2.3e-64 | 254.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013534.t1 | MTR_7g105080 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene013534.t1 | MTR_3g092130 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene013534.t1 | MTR_1g059690 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene013534.t1 | MTR_3g092130 | 98.361 | 122 | 2 | 0 | 1 | 122 | 1 | 122 | 2.83e-87 | 250 |
MS.gene013534.t1 | MTR_5g092700 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
MS.gene013534.t1 | MTR_5g092700 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
MS.gene013534.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
MS.gene013534.t1 | MTR_4g073580 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
MS.gene013534.t1 | MTR_8g088060 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.45e-49 | 155 |
MS.gene013534.t1 | MTR_5g033960 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.55e-49 | 155 |
MS.gene013534.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 3.56e-49 | 155 |
MS.gene013534.t1 | MTR_4g073580 | 44.231 | 104 | 28 | 1 | 3 | 76 | 79 | 182 | 6.31e-20 | 80.9 |
MS.gene013534.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.21e-49 | 156 |
MS.gene013534.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 138 | 214 | 5.53e-49 | 155 |
MS.gene013534.t1 | MTR_4g088485 | 79.221 | 77 | 1 | 1 | 1 | 77 | 77 | 138 | 3.49e-34 | 118 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.74e-49 | 156 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.74e-49 | 156 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.35e-49 | 156 |
MS.gene013534.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.54e-49 | 156 |
MS.gene013534.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.54e-49 | 156 |
MS.gene013534.t1 | MTR_1g066390 | 100.000 | 76 | 0 | 0 | 1 | 76 | 153 | 228 | 8.47e-49 | 156 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.27e-48 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.27e-48 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.27e-48 | 157 |
MS.gene013534.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.39e-48 | 155 |
MS.gene013534.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 2.56e-48 | 154 |
MS.gene013534.t1 | MTR_4g080920 | 69.737 | 76 | 23 | 0 | 1 | 76 | 153 | 228 | 5.76e-30 | 107 |
MS.gene013534.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.73e-48 | 156 |
MS.gene013534.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.73e-48 | 156 |
MS.gene013534.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 214 | 290 | 3.61e-48 | 156 |
MS.gene013534.t1 | MTR_6g061930 | 76.623 | 77 | 3 | 1 | 1 | 77 | 153 | 214 | 1.26e-31 | 113 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 49 | 125 | 3.06e-48 | 156 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 125 | 201 | 3.06e-48 | 156 |
MS.gene013534.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 201 | 277 | 3.97e-48 | 155 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.19e-48 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.19e-48 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.19e-48 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 4.81e-48 | 156 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.89e-48 | 155 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.89e-48 | 155 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 4.89e-48 | 155 |
MS.gene013534.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.76e-47 | 157 |
MS.gene013534.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.76e-47 | 157 |
MS.gene013534.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.76e-47 | 157 |
MS.gene013534.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.76e-47 | 157 |
MS.gene013534.t1 | MTR_8g081020 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.65e-47 | 156 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.78e-47 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.78e-47 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.78e-47 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.78e-47 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.68e-47 | 156 |
MS.gene013534.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene013534.t1 | MTR_4g091580 | 97.403 | 77 | 2 | 0 | 1 | 77 | 229 | 305 | 5.42e-47 | 155 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.44e-46 | 157 |
MS.gene013534.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 457 | 532 | 3.63e-46 | 156 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.52e-46 | 157 |
MS.gene013534.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.37e-46 | 156 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.65e-46 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.65e-46 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.65e-46 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.65e-46 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.65e-46 | 157 |
MS.gene013534.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.55e-46 | 156 |
MS.gene013534.t1 | MTR_4g091580 | 96.104 | 77 | 3 | 0 | 1 | 77 | 305 | 381 | 1.00e-44 | 152 |
MS.gene013534.t1 | MTR_8g479250 | 96.104 | 77 | 3 | 0 | 1 | 77 | 141 | 217 | 1.09e-45 | 150 |
MS.gene013534.t1 | MTR_8g479250 | 76.389 | 72 | 6 | 1 | 1 | 72 | 217 | 277 | 6.83e-27 | 101 |
MS.gene013534.t1 | MTR_8g479250 | 100.000 | 41 | 0 | 0 | 1 | 41 | 1 | 41 | 1.21e-20 | 85.1 |
MS.gene013534.t1 | MTR_8g479250 | 91.429 | 35 | 3 | 0 | 43 | 77 | 107 | 141 | 1.11e-14 | 68.9 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 533 | 609 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 609 | 685 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 685 | 761 | 2.16e-45 | 157 |
MS.gene013534.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 761 | 837 | 2.88e-45 | 156 |
MS.gene013534.t1 | MTR_4g088495 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 4.96e-44 | 153 |
MS.gene013534.t1 | MTR_1g046640 | 71.053 | 76 | 22 | 0 | 1 | 76 | 240 | 315 | 3.01e-28 | 105 |
MS.gene013534.t1 | MTR_5g076810 | 68.831 | 77 | 23 | 1 | 1 | 76 | 194 | 270 | 1.09e-27 | 103 |
MS.gene013534.t1 | MTR_5g076660 | 69.863 | 73 | 22 | 0 | 1 | 73 | 266 | 338 | 8.62e-27 | 102 |
MS.gene013534.t1 | MTR_5g067400 | 68.421 | 76 | 24 | 0 | 1 | 76 | 241 | 316 | 1.74e-25 | 98.2 |
MS.gene013534.t1 | MTR_5g061310 | 60.000 | 75 | 30 | 0 | 1 | 75 | 2 | 76 | 4.97e-25 | 90.9 |
MS.gene013534.t1 | MTR_5g076370 | 64.384 | 73 | 26 | 0 | 1 | 73 | 267 | 339 | 3.83e-23 | 92.4 |
MS.gene013534.t1 | MTR_2g038430 | 61.333 | 75 | 29 | 0 | 1 | 75 | 268 | 342 | 5.57e-23 | 92.0 |
MS.gene013534.t1 | MTR_5g076505 | 61.333 | 75 | 29 | 0 | 1 | 75 | 240 | 314 | 8.04e-23 | 90.9 |
MS.gene013534.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 171 | 246 | 3.44e-22 | 88.2 |
MS.gene013534.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 4.89e-22 | 89.0 |
MS.gene013534.t1 | MTR_5g076720 | 65.333 | 75 | 26 | 0 | 1 | 75 | 315 | 389 | 6.25e-22 | 89.4 |
MS.gene013534.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 6.95e-22 | 88.6 |
MS.gene013534.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 271 | 346 | 9.51e-22 | 88.6 |
MS.gene013534.t1 | MTR_5g076740 | 59.211 | 76 | 30 | 1 | 1 | 75 | 86 | 161 | 1.13e-21 | 84.7 |
MS.gene013534.t1 | MTR_2g038420 | 60.000 | 75 | 30 | 0 | 1 | 75 | 260 | 334 | 1.35e-21 | 88.2 |
MS.gene013534.t1 | MTR_7g094390 | 58.667 | 75 | 31 | 0 | 1 | 75 | 402 | 476 | 8.93e-21 | 86.7 |
MS.gene013534.t1 | MTR_5g076520 | 57.333 | 75 | 31 | 1 | 1 | 74 | 244 | 318 | 3.43e-19 | 81.3 |
MS.gene013534.t1 | MTR_7g024290 | 60.526 | 76 | 29 | 1 | 1 | 75 | 241 | 316 | 8.99e-19 | 80.1 |
MS.gene013534.t1 | MTR_4g009980 | 55.224 | 67 | 30 | 0 | 9 | 75 | 4 | 70 | 5.06e-18 | 72.8 |
MS.gene013534.t1 | MTR_5g061290 | 53.333 | 75 | 35 | 0 | 1 | 75 | 252 | 326 | 6.95e-18 | 77.8 |
MS.gene013534.t1 | MTR_5g079360 | 70.213 | 47 | 14 | 0 | 50 | 96 | 9 | 55 | 4.53e-17 | 70.1 |
MS.gene013534.t1 | MTR_5g076350 | 48.684 | 76 | 38 | 1 | 1 | 75 | 8 | 83 | 1.16e-15 | 67.4 |
MS.gene013534.t1 | MTR_5g076760 | 59.649 | 57 | 23 | 0 | 11 | 67 | 5 | 61 | 4.47e-15 | 65.9 |
MS.gene013534.t1 | MTR_5g076780 | 58.333 | 60 | 25 | 0 | 15 | 74 | 4 | 63 | 5.66e-15 | 65.1 |
MS.gene013534.t1 | MTR_5g076340 | 50.649 | 77 | 36 | 2 | 1 | 75 | 9 | 85 | 1.24e-14 | 64.7 |
MS.gene013534.t1 | MTR_4g080783 | 76.471 | 34 | 8 | 0 | 44 | 77 | 7 | 40 | 6.78e-12 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013534.t1 | AT3G52590 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
MS.gene013534.t1 | AT2G36170 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
MS.gene013534.t1 | AT2G35635 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.81e-50 | 155 |
MS.gene013534.t1 | AT2G35635 | 60.526 | 76 | 30 | 0 | 3 | 78 | 79 | 154 | 2.00e-26 | 96.7 |
MS.gene013534.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
MS.gene013534.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
MS.gene013534.t1 | AT1G31340 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.51e-49 | 155 |
MS.gene013534.t1 | AT1G31340 | 62.667 | 75 | 28 | 0 | 3 | 77 | 79 | 153 | 5.16e-27 | 98.6 |
MS.gene013534.t1 | AT3G62250 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.70e-49 | 155 |
MS.gene013534.t1 | AT1G23410 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.71e-49 | 155 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene013534.t1 | AT1G55060 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.90e-48 | 155 |
MS.gene013534.t1 | AT1G55060 | 97.368 | 76 | 2 | 0 | 1 | 76 | 153 | 228 | 2.46e-46 | 149 |
MS.gene013534.t1 | AT1G55060 | 85.714 | 77 | 11 | 0 | 1 | 77 | 1 | 77 | 2.30e-42 | 139 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene013534.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene013534.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene013534.t1 | AT1G65350 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 6.13e-48 | 156 |
MS.gene013534.t1 | AT1G65350 | 97.403 | 77 | 2 | 0 | 1 | 77 | 152 | 228 | 9.26e-47 | 153 |
MS.gene013534.t1 | AT1G65350 | 97.403 | 77 | 1 | 1 | 1 | 77 | 77 | 152 | 6.86e-45 | 148 |
MS.gene013534.t1 | AT1G65350 | 80.000 | 90 | 4 | 1 | 1 | 76 | 228 | 317 | 6.05e-39 | 133 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.97e-47 | 157 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.97e-47 | 157 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.97e-47 | 157 |
MS.gene013534.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.97e-47 | 157 |
MS.gene013534.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.96e-47 | 156 |
MS.gene013534.t1 | AT5G37640 | 96.104 | 77 | 3 | 0 | 1 | 77 | 79 | 155 | 4.64e-47 | 154 |
MS.gene013534.t1 | AT5G37640 | 92.208 | 77 | 6 | 0 | 1 | 77 | 155 | 231 | 6.93e-43 | 143 |
MS.gene013534.t1 | AT5G37640 | 92.208 | 77 | 5 | 1 | 1 | 76 | 231 | 307 | 8.36e-41 | 138 |
MS.gene013534.t1 | AT5G37640 | 77.922 | 77 | 17 | 0 | 1 | 77 | 3 | 79 | 5.00e-34 | 120 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
MS.gene013534.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
MS.gene013534.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
MS.gene013534.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
MS.gene013534.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
MS.gene013534.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
MS.gene013534.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
MS.gene013534.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
MS.gene013534.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
MS.gene013534.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
MS.gene013534.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
MS.gene013534.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
MS.gene013534.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
MS.gene013534.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
MS.gene013534.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
MS.gene013534.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
MS.gene013534.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
MS.gene013534.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
MS.gene013534.t1 | AT1G53930 | 75.342 | 73 | 18 | 0 | 1 | 73 | 86 | 158 | 6.40e-33 | 113 |
MS.gene013534.t1 | AT1G53950 | 61.972 | 71 | 27 | 0 | 1 | 71 | 69 | 139 | 2.72e-25 | 93.6 |
MS.gene013534.t1 | AT1G11980 | 55.263 | 76 | 34 | 0 | 1 | 76 | 1 | 76 | 2.81e-24 | 89.0 |
MS.gene013534.t1 | AT1G53945 | 46.269 | 67 | 36 | 0 | 1 | 67 | 46 | 112 | 7.40e-13 | 61.2 |
MS.gene013534.t1 | AT4G12570 | 38.667 | 75 | 45 | 1 | 1 | 74 | 95 | 169 | 4.20e-12 | 62.4 |
MS.gene013534.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
MS.gene013534.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
Find 36 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTCAGAAATTAACCTTTC+TGG | 0.099822 | 3.4:-84319364 | None:intergenic |
TCCATCTTCCAACTGCTTTC+CGG | 0.264402 | 3.4:-84319318 | None:intergenic |
CTTATCCTGGTTATACTTCC+TGG | 0.288777 | 3.4:-84319565 | None:intergenic |
GTCTACTTGATCTTCTTCTT+TGG | 0.291217 | 3.4:-84321121 | None:intergenic |
AAGATCAACCTCTGCTGGTC+CGG | 0.328982 | 3.4:-84319293 | None:intergenic |
CTCAAGGGTGATAGTCTTGC+CGG | 0.357525 | 3.4:-84319111 | None:intergenic |
AATCATTGAGCCTTCTTTGA+TGG | 0.363914 | 3.4:+84319536 | MS.gene013534:CDS |
CAACGTCAAAGCTAAGATTC+AGG | 0.397707 | 3.4:+84319157 | MS.gene013534:CDS |
AGATCAACCTCTGCTGGTCC+GGG | 0.424083 | 3.4:-84319292 | None:intergenic |
CTTCTTTGATGGCGTTGGCC+AGG | 0.452976 | 3.4:+84319547 | MS.gene013534:CDS |
CGGCGAAGATCAACCTCTGC+TGG | 0.466798 | 3.4:-84319298 | None:intergenic |
TGAGCCTTCTTTGATGGCGT+TGG | 0.490761 | 3.4:+84319542 | MS.gene013534:CDS |
CTGGCCAACGCCATCAAAGA+AGG | 0.492085 | 3.4:-84319546 | None:intergenic |
TGCGGCAGATAGTCTTATCC+TGG | 0.502333 | 3.4:-84319578 | None:intergenic |
GCCGGAAAGCAGTTGGAAGA+TGG | 0.509801 | 3.4:+84319317 | MS.gene013534:CDS |
TTCCTGCAGTTGACAGCACG+AGG | 0.524526 | 3.4:-84320970 | None:intergenic |
GGTGATAGTCTTGCCGGTGA+GGG | 0.538859 | 3.4:-84319105 | None:intergenic |
GCTAAGATTCAGGATAAAGA+AGG | 0.540669 | 3.4:+84319167 | MS.gene013534:CDS |
CAGCAGAGGTTGATCTTCGC+CGG | 0.541092 | 3.4:+84319299 | MS.gene013534:CDS |
ACCCTCGTGCTGTCAACTGC+AGG | 0.545009 | 3.4:+84320968 | MS.gene013534:CDS |
GATCTTCGCCGGAAAGCAGT+TGG | 0.546373 | 3.4:+84319310 | MS.gene013534:CDS |
GGGTGATAGTCTTGCCGGTG+AGG | 0.566343 | 3.4:-84319106 | None:intergenic |
CTGGATGTTGTAGTCAGCAA+GGG | 0.569635 | 3.4:-84319345 | None:intergenic |
TGTCGCTTGACTCCACCTCA+AGG | 0.574617 | 3.4:-84319127 | None:intergenic |
ATCAACCTCTGCTGGTCCGG+GGG | 0.575505 | 3.4:-84319290 | None:intergenic |
ATCTTCGTGAAAACCCTCAC+CGG | 0.581247 | 3.4:+84319092 | MS.gene013534:CDS |
TCTGGATGTTGTAGTCAGCA+AGG | 0.585018 | 3.4:-84319346 | None:intergenic |
GTTGGCCAGGAAGTATAACC+AGG | 0.589917 | 3.4:+84319560 | MS.gene013534:CDS |
GATCAACCTCTGCTGGTCCG+GGG | 0.600001 | 3.4:-84319291 | None:intergenic |
CAAGACTATCACCCTTGAGG+TGG | 0.603784 | 3.4:+84319115 | MS.gene013534:CDS |
CAATTGTTTAGGAATTCCCC+CGG | 0.609118 | 3.4:+84319274 | MS.gene013534:intron |
GTCGCTTGACTCCACCTCAA+GGG | 0.609137 | 3.4:-84319126 | None:intergenic |
GCTGACTACAACATCCAGAA+AGG | 0.625044 | 3.4:+84319350 | MS.gene013534:CDS |
GAAGTGCGGACACAGCAACC+AGG | 0.663806 | 3.4:+84320996 | MS.gene013534:CDS |
CGGCAAGACTATCACCCTTG+AGG | 0.665715 | 3.4:+84319112 | MS.gene013534:CDS |
TCCTGCAGTTGACAGCACGA+GGG | 0.675676 | 3.4:-84320969 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTATTTAGTCTTAA+TGG | + | chr3.4:84321071-84321090 | MS.gene013534:intron | 10.0% |
!! | TAATAAAAACTTACTTCATT+TGG | - | chr3.4:84320004-84320023 | None:intergenic | 15.0% |
!!! | AGTAAAATAATCTCTTTTTA+TGG | - | chr3.4:84320575-84320594 | None:intergenic | 15.0% |
!!! | ATAAAAAGAGATTATTTTAC+TGG | + | chr3.4:84320574-84320593 | MS.gene013534:intron | 15.0% |
!! | AAAATAATAGTAATTGCCTA+GGG | + | chr3.4:84320739-84320758 | MS.gene013534:intron | 20.0% |
!! | AAATAGTTAATATATGGGAT+AGG | + | chr3.4:84320136-84320155 | MS.gene013534:intron | 20.0% |
!! | AATCATCTGAATGTTTAAAA+AGG | + | chr3.4:84319872-84319891 | MS.gene013534:intron | 20.0% |
!! | ATCCCATATATTAACTATTT+GGG | - | chr3.4:84320136-84320155 | None:intergenic | 20.0% |
!! | CAGAATAATACAATATAACT+AGG | - | chr3.4:84320824-84320843 | None:intergenic | 20.0% |
!! | TATAAATAGAATTTCTGTCT+TGG | - | chr3.4:84320073-84320092 | None:intergenic | 20.0% |
!! | TATCCCATATATTAACTATT+TGG | - | chr3.4:84320137-84320156 | None:intergenic | 20.0% |
!! | TTATAATTGCCATCTATTAT+TGG | + | chr3.4:84320865-84320884 | MS.gene013534:intron | 20.0% |
!! | TTTCTTTCTTTCAATTGTTT+AGG | + | chr3.4:84319263-84319282 | MS.gene013534:intron | 20.0% |
!!! | CCAAGGTATTTAAATATAAA+AGG | - | chr3.4:84320252-84320271 | None:intergenic | 20.0% |
!!! | CCTTTTATATTTAAATACCT+TGG | + | chr3.4:84320249-84320268 | MS.gene013534:intron | 20.0% |
!!! | GGTTTTATGTTAAAATAGTT+AGG | + | chr3.4:84319940-84319959 | MS.gene013534:intron | 20.0% |
!!! | TATAAAAGGTATTGTTATCA+CGG | - | chr3.4:84320238-84320257 | None:intergenic | 20.0% |
!!! | TTAAAAAGGTTACTTTTCTT+TGG | + | chr3.4:84319886-84319905 | MS.gene013534:intron | 20.0% |
! | AAAAGAGAAAAAAATGGATC+TGG | - | chr3.4:84319212-84319231 | None:intergenic | 25.0% |
! | AAATAATAGTAATTGCCTAG+GGG | + | chr3.4:84320740-84320759 | MS.gene013534:intron | 25.0% |
! | AACACTTTAGACTTTAGTTA+AGG | + | chr3.4:84319764-84319783 | MS.gene013534:intron | 25.0% |
! | AATTCAGAAATTAACCTTTC+TGG | - | chr3.4:84319367-84319386 | None:intergenic | 25.0% |
! | ACTTCTGATTACATTGAATT+AGG | + | chr3.4:84320420-84320439 | MS.gene013534:intron | 25.0% |
! | AGACCCAAATAGTTAATATA+TGG | + | chr3.4:84320130-84320149 | MS.gene013534:intron | 25.0% |
! | ATAGTATCACATAAGATGTA+GGG | - | chr3.4:84320794-84320813 | None:intergenic | 25.0% |
! | CAAAATAATAGTAATTGCCT+AGG | + | chr3.4:84320738-84320757 | MS.gene013534:intron | 25.0% |
! | GAAGGAAAAAGAGAAAAAAA+TGG | - | chr3.4:84319218-84319237 | None:intergenic | 25.0% |
! | GACCCAAATAGTTAATATAT+GGG | + | chr3.4:84320131-84320150 | MS.gene013534:intron | 25.0% |
! | GATTCATACAATATGAAGTA+TGG | - | chr3.4:84320510-84320529 | None:intergenic | 25.0% |
! | TATAGTATCACATAAGATGT+AGG | - | chr3.4:84320795-84320814 | None:intergenic | 25.0% |
!! | ATTAATGTTTGAAACCTATC+TGG | + | chr3.4:84320604-84320623 | MS.gene013534:intron | 25.0% |
!! | ATTTTGCAAATGAATACCTT+TGG | - | chr3.4:84320724-84320743 | None:intergenic | 25.0% |
!! | GTCAACAACAATAAGATTTT+GGG | - | chr3.4:84320453-84320472 | None:intergenic | 25.0% |
!!! | TATTTTTTGTATTGCAGTTG+AGG | + | chr3.4:84321098-84321117 | MS.gene013534:intron | 25.0% |
AAGATTTCATTCAATACGAC+AGG | - | chr3.4:84321043-84321062 | None:intergenic | 30.0% | |
AATAATAGTAATTGCCTAGG+GGG | + | chr3.4:84320741-84320760 | MS.gene013534:intron | 30.0% | |
ACAATTATAAGTAAGCACAC+TGG | - | chr3.4:84320922-84320941 | None:intergenic | 30.0% | |
ATCAAACAAAAACGAATCGA+AGG | - | chr3.4:84319236-84319255 | None:intergenic | 30.0% | |
GATGGCAATTATAATTCAAG+TGG | - | chr3.4:84320859-84320878 | None:intergenic | 30.0% | |
TGCAATAAGTGCAAATTCAT+AGG | + | chr3.4:84319919-84319938 | MS.gene013534:intron | 30.0% | |
TTAGACTTTAGTTAAGGTTC+AGG | + | chr3.4:84319770-84319789 | MS.gene013534:intron | 30.0% | |
! | AATGATGGTTTTCTTCAGTT+TGG | + | chr3.4:84320179-84320198 | MS.gene013534:intron | 30.0% |
! | AGTTCATACATCTGTTGTTT+CGG | - | chr3.4:84320326-84320345 | None:intergenic | 30.0% |
! | CGTCAACAACAATAAGATTT+TGG | - | chr3.4:84320454-84320473 | None:intergenic | 30.0% |
! | TTCAATGTAATCAGAAGTGT+CGG | - | chr3.4:84320418-84320437 | None:intergenic | 30.0% |
! | TTGTGTTATTGGTATTGGAT+TGG | + | chr3.4:84319624-84319643 | MS.gene013534:intron | 30.0% |
!!! | ACACATGATTTTGAAACCAA+AGG | + | chr3.4:84320705-84320724 | MS.gene013534:intron | 30.0% |
!!! | TCAGGTTGTACTTTTTTTTG+AGG | + | chr3.4:84319788-84319807 | MS.gene013534:intron | 30.0% |
AATCATTGAGCCTTCTTTGA+TGG | + | chr3.4:84319536-84319555 | MS.gene013534:CDS | 35.0% | |
AATGACTCTTGTCTGAATTG+GGG | + | chr3.4:84319449-84319468 | MS.gene013534:intron | 35.0% | |
AGATTGTGCAAACTTACTTG+CGG | - | chr3.4:84319599-84319618 | None:intergenic | 35.0% | |
CACAAAATCTCAATCCAGAT+AGG | - | chr3.4:84320621-84320640 | None:intergenic | 35.0% | |
CACATCTTCGTTCAAACAAT+TGG | + | chr3.4:84320529-84320548 | MS.gene013534:intron | 35.0% | |
GAATGACTCTTGTCTGAATT+GGG | + | chr3.4:84319448-84319467 | MS.gene013534:intron | 35.0% | |
GAGCACTAAAATCATGTCAA+AGG | - | chr3.4:84319832-84319851 | None:intergenic | 35.0% | |
GCAAAATATCAACACAACCA+AGG | - | chr3.4:84320269-84320288 | None:intergenic | 35.0% | |
GCTAAGATTCAGGATAAAGA+AGG | + | chr3.4:84319167-84319186 | MS.gene013534:CDS | 35.0% | |
TACTTATAATTGTGCTGTGC+AGG | + | chr3.4:84320929-84320948 | MS.gene013534:intron | 35.0% | |
TGAATGACTCTTGTCTGAAT+TGG | + | chr3.4:84319447-84319466 | MS.gene013534:intron | 35.0% | |
TGGATCTGGTTATTTGAGTA+AGG | - | chr3.4:84319198-84319217 | None:intergenic | 35.0% | |
TTGCCATCTATTATTGGAAG+CGG | + | chr3.4:84320871-84320890 | MS.gene013534:intron | 35.0% | |
! | GAAAACCATCATTTTCGATG+AGG | - | chr3.4:84320172-84320191 | None:intergenic | 35.0% |
!! | ACTATTTGGGTCTTGTTAAC+CGG | - | chr3.4:84320123-84320142 | None:intergenic | 35.0% |
!! | GGTTGTGTTGATATTTTGCT+GGG | + | chr3.4:84320270-84320289 | MS.gene013534:intron | 35.0% |
!! | TGGTTGTGTTGATATTTTGC+TGG | + | chr3.4:84320269-84320288 | MS.gene013534:intron | 35.0% |
!!! | CAACTTTGCATCTTGTTTTG+AGG | + | chr3.4:84319502-84319521 | MS.gene013534:CDS | 35.0% |
AACTGCAGGAAAAAGAAGTG+CGG | + | chr3.4:84320982-84321001 | MS.gene013534:CDS | 40.0% | |
AAGTGATAGAACACTGTACC+TGG | - | chr3.4:84321017-84321036 | None:intergenic | 40.0% | |
CAACGTCAAAGCTAAGATTC+AGG | + | chr3.4:84319157-84319176 | MS.gene013534:CDS | 40.0% | |
CAATTGTTTAGGAATTCCCC+CGG | + | chr3.4:84319274-84319293 | MS.gene013534:intron | 40.0% | |
CACACGTAAGCAGATATCTA+AGG | - | chr3.4:84320675-84320694 | None:intergenic | 40.0% | |
CTTATCCTGGTTATACTTCC+TGG | - | chr3.4:84319568-84319587 | None:intergenic | 40.0% | |
GCAAGTAAGTTTGCACAATC+TGG | + | chr3.4:84319598-84319617 | MS.gene013534:intron | 40.0% | |
TGCCATCTATTATTGGAAGC+GGG | + | chr3.4:84320872-84320891 | MS.gene013534:intron | 40.0% | |
TTGGCATGGCATACACTTAT+AGG | + | chr3.4:84320198-84320217 | MS.gene013534:intron | 40.0% | |
! | GGCTCTTGTGTTATTGGTAT+TGG | + | chr3.4:84319619-84319638 | MS.gene013534:intron | 40.0% |
! | TGGTTTTCTTCAGTTTGGCA+TGG | + | chr3.4:84320184-84320203 | MS.gene013534:intron | 40.0% |
! | TTTTCCTACAGTTGTCAACG+AGG | - | chr3.4:84319854-84319873 | None:intergenic | 40.0% |
!! | CAATCTGGCTCTTGTGTTAT+TGG | + | chr3.4:84319613-84319632 | MS.gene013534:intron | 40.0% |
!! | TGGAACAGTTCTAAGACAGT+TGG | - | chr3.4:84320555-84320574 | None:intergenic | 40.0% |
AGAATGTTAACCAGTGCACC+CGG | + | chr3.4:84319963-84319982 | MS.gene013534:intron | 45.0% | |
ATCTTCGTGAAAACCCTCAC+CGG | + | chr3.4:84319092-84319111 | MS.gene013534:CDS | 45.0% | |
ATTCGTGTCAATGTCGTGTC+TGG | + | chr3.4:84320475-84320494 | MS.gene013534:intron | 45.0% | |
CACAGCCTCATCGAAAATGA+TGG | + | chr3.4:84320164-84320183 | MS.gene013534:intron | 45.0% | |
CTGGATGTTGTAGTCAGCAA+GGG | - | chr3.4:84319348-84319367 | None:intergenic | 45.0% | |
GCCATCTATTATTGGAAGCG+GGG | + | chr3.4:84320873-84320892 | MS.gene013534:intron | 45.0% | |
GCTGACTACAACATCCAGAA+AGG | + | chr3.4:84319350-84319369 | MS.gene013534:CDS | 45.0% | |
GGTATTGTTATCACGGAACG+AGG | - | chr3.4:84320231-84320250 | None:intergenic | 45.0% | |
TCCATCTTCCAACTGCTTTC+CGG | - | chr3.4:84319321-84319340 | None:intergenic | 45.0% | |
TCTGGATGTTGTAGTCAGCA+AGG | - | chr3.4:84319349-84319368 | None:intergenic | 45.0% | |
! | TTTGAGGCACATACCCTTGT+TGG | + | chr3.4:84319804-84319823 | MS.gene013534:intron | 45.0% |
!! | CATGTCAAAGGCACCAACAA+GGG | - | chr3.4:84319820-84319839 | None:intergenic | 45.0% |
!! | TCATGTCAAAGGCACCAACA+AGG | - | chr3.4:84319821-84319840 | None:intergenic | 45.0% |
!!! | CATCTTGTTTTGAGGCTTCG+TGG | + | chr3.4:84319510-84319529 | MS.gene013534:CDS | 45.0% |
AAGATCAACCTCTGCTGGTC+CGG | - | chr3.4:84319296-84319315 | None:intergenic | 50.0% | |
AATGTTAACCAGTGCACCCG+GGG | + | chr3.4:84319965-84319984 | MS.gene013534:intron | 50.0% | |
AGATTCCTTAACCAGTGCCC+CGG | + | chr3.4:84320092-84320111 | MS.gene013534:intron | 50.0% | |
CAAGACTATCACCCTTGAGG+TGG | + | chr3.4:84319115-84319134 | MS.gene013534:CDS | 50.0% | |
GAATGTTAACCAGTGCACCC+GGG | + | chr3.4:84319964-84319983 | MS.gene013534:intron | 50.0% | |
GCCCCGCTTCCAATAATAGA+TGG | - | chr3.4:84320877-84320896 | None:intergenic | 50.0% | |
TGCTCCTCGTTGACAACTGT+AGG | + | chr3.4:84319847-84319866 | MS.gene013534:intron | 50.0% | |
! | CTCAAGGGTGATAGTCTTGC+CGG | - | chr3.4:84319114-84319133 | None:intergenic | 50.0% |
! | GTTGGCCAGGAAGTATAACC+AGG | + | chr3.4:84319560-84319579 | MS.gene013534:CDS | 50.0% |
! | TTGGTGCTTAACCAATGCCC+CGG | - | chr3.4:84319985-84320004 | None:intergenic | 50.0% |
!! | TGAGCCTTCTTTGATGGCGT+TGG | + | chr3.4:84319542-84319561 | MS.gene013534:CDS | 50.0% |
!! | TGCGGCAGATAGTCTTATCC+TGG | - | chr3.4:84319581-84319600 | None:intergenic | 50.0% |
!!! | CTTGTTTTGAGGCTTCGTGG+TGG | + | chr3.4:84319513-84319532 | MS.gene013534:CDS | 50.0% |
ACAGTACACGAGTCGGACAG+CGG | - | chr3.4:84320384-84320403 | None:intergenic | 55.0% | |
AGATCAACCTCTGCTGGTCC+GGG | - | chr3.4:84319295-84319314 | None:intergenic | 55.0% | |
ATTCCTTAACCAGTGCCCCG+GGG | + | chr3.4:84320094-84320113 | MS.gene013534:intron | 55.0% | |
CGGCAAGACTATCACCCTTG+AGG | + | chr3.4:84319112-84319131 | MS.gene013534:CDS | 55.0% | |
CTGGCCAACGCCATCAAAGA+AGG | - | chr3.4:84319549-84319568 | None:intergenic | 55.0% | |
GATCTTCGCCGGAAAGCAGT+TGG | + | chr3.4:84319310-84319329 | MS.gene013534:CDS | 55.0% | |
GATTCCTTAACCAGTGCCCC+GGG | + | chr3.4:84320093-84320112 | MS.gene013534:intron | 55.0% | |
GCCGGAAAGCAGTTGGAAGA+TGG | + | chr3.4:84319317-84319336 | MS.gene013534:CDS | 55.0% | |
GCGTCTGACAGTACACGAGT+CGG | - | chr3.4:84320391-84320410 | None:intergenic | 55.0% | |
GTCGCTTGACTCCACCTCAA+GGG | - | chr3.4:84319129-84319148 | None:intergenic | 55.0% | |
TCCTCTAACATGCACCCCCT+AGG | - | chr3.4:84320758-84320777 | None:intergenic | 55.0% | |
TCCTGCAGTTGACAGCACGA+GGG | - | chr3.4:84320972-84320991 | None:intergenic | 55.0% | |
TGGTGCTTAACCAATGCCCC+GGG | - | chr3.4:84319984-84320003 | None:intergenic | 55.0% | |
TTCCTGCAGTTGACAGCACG+AGG | - | chr3.4:84320973-84320992 | None:intergenic | 55.0% | |
! | CAGCAGAGGTTGATCTTCGC+CGG | + | chr3.4:84319299-84319318 | MS.gene013534:CDS | 55.0% |
! | GGTGATAGTCTTGCCGGTGA+GGG | - | chr3.4:84319108-84319127 | None:intergenic | 55.0% |
! | TGTCGCTTGACTCCACCTCA+AGG | - | chr3.4:84319130-84319149 | None:intergenic | 55.0% |
!! | CTTCTTTGATGGCGTTGGCC+AGG | + | chr3.4:84319547-84319566 | MS.gene013534:CDS | 55.0% |
ACCCTCGTGCTGTCAACTGC+AGG | + | chr3.4:84320968-84320987 | MS.gene013534:CDS | 60.0% | |
ATCAACCTCTGCTGGTCCGG+GGG | - | chr3.4:84319293-84319312 | None:intergenic | 60.0% | |
CAGTACACGAGTCGGACAGC+GGG | - | chr3.4:84320383-84320402 | None:intergenic | 60.0% | |
CGGCGAAGATCAACCTCTGC+TGG | - | chr3.4:84319301-84319320 | None:intergenic | 60.0% | |
GAAGTGCGGACACAGCAACC+AGG | + | chr3.4:84320996-84321015 | MS.gene013534:CDS | 60.0% | |
GATCAACCTCTGCTGGTCCG+GGG | - | chr3.4:84319294-84319313 | None:intergenic | 60.0% | |
TCTTGTTAACCGGTGCCCCC+GGG | - | chr3.4:84320113-84320132 | None:intergenic | 60.0% | |
TTCCTTAACCAGTGCCCCGG+GGG | + | chr3.4:84320095-84320114 | MS.gene013534:intron | 60.0% | |
! | GCCTAGGGGGTGCATGTTAG+AGG | + | chr3.4:84320754-84320773 | MS.gene013534:intron | 60.0% |
! | GGGTGATAGTCTTGCCGGTG+AGG | - | chr3.4:84319109-84319128 | None:intergenic | 60.0% |
! | GTCTTGTTAACCGGTGCCCC+CGG | - | chr3.4:84320114-84320133 | None:intergenic | 60.0% |
AACCAATGCCCCGGGTGCAC+TGG | - | chr3.4:84319976-84319995 | None:intergenic | 65.0% | |
AACCAGTGCACCCGGGGCAT+TGG | + | chr3.4:84319971-84319990 | MS.gene013534:intron | 65.0% | |
CTTGTTAACCGGTGCCCCCG+GGG | - | chr3.4:84320112-84320131 | None:intergenic | 65.0% | |
GAATTCCCCCGGACCAGCAG+AGG | + | chr3.4:84319285-84319304 | MS.gene013534:CDS | 65.0% | |
!! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr3.4:84320100-84320119 | None:intergenic | 70.0% |
! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr3.4:84320101-84320120 | MS.gene013534:intron | 75.0% |
! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr3.4:84320106-84320125 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 84319086 | 84321141 | 84319086 | ID=MS.gene013534 |
chr3.4 | mRNA | 84319086 | 84321141 | 84319086 | ID=MS.gene013534.t1;Parent=MS.gene013534 |
chr3.4 | exon | 84319086 | 84319188 | 84319086 | ID=MS.gene013534.t1.exon1;Parent=MS.gene013534.t1 |
chr3.4 | CDS | 84319086 | 84319188 | 84319086 | ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1 |
chr3.4 | exon | 84319285 | 84319371 | 84319285 | ID=MS.gene013534.t1.exon2;Parent=MS.gene013534.t1 |
chr3.4 | CDS | 84319285 | 84319371 | 84319285 | ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1 |
chr3.4 | exon | 84319499 | 84319601 | 84319499 | ID=MS.gene013534.t1.exon3;Parent=MS.gene013534.t1 |
chr3.4 | CDS | 84319499 | 84319601 | 84319499 | ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1 |
chr3.4 | exon | 84320951 | 84321017 | 84320951 | ID=MS.gene013534.t1.exon4;Parent=MS.gene013534.t1 |
chr3.4 | CDS | 84320951 | 84321017 | 84320951 | ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1 |
chr3.4 | exon | 84321115 | 84321141 | 84321115 | ID=MS.gene013534.t1.exon5;Parent=MS.gene013534.t1 |
chr3.4 | CDS | 84321115 | 84321141 | 84321115 | ID=cds.MS.gene013534.t1;Parent=MS.gene013534.t1 |
Gene Sequence |
Protein sequence |