Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81765.t1 | EYU19679.1 | 100 | 128 | 0 | 0 | 1 | 128 | 44 | 171 | 3.20E-64 | 254.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81765.t1 | P49636 | 98.4 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 8.5e-66 | 250.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81765.t1 | A0A251UKK8 | 100.0 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 2.3e-64 | 254.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81765.t1 | MTR_7g105080 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene81765.t1 | MTR_3g092130 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene81765.t1 | MTR_1g059690 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
MS.gene81765.t1 | MTR_3g092130 | 98.361 | 122 | 2 | 0 | 1 | 122 | 1 | 122 | 2.83e-87 | 250 |
MS.gene81765.t1 | MTR_5g092700 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
MS.gene81765.t1 | MTR_5g092700 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
MS.gene81765.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
MS.gene81765.t1 | MTR_4g073580 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
MS.gene81765.t1 | MTR_8g088060 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.45e-49 | 155 |
MS.gene81765.t1 | MTR_5g033960 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.55e-49 | 155 |
MS.gene81765.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 3.56e-49 | 155 |
MS.gene81765.t1 | MTR_4g073580 | 44.231 | 104 | 28 | 1 | 3 | 76 | 79 | 182 | 6.31e-20 | 80.9 |
MS.gene81765.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.21e-49 | 156 |
MS.gene81765.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 138 | 214 | 5.53e-49 | 155 |
MS.gene81765.t1 | MTR_4g088485 | 79.221 | 77 | 1 | 1 | 1 | 77 | 77 | 138 | 3.49e-34 | 118 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.74e-49 | 156 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.74e-49 | 156 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.35e-49 | 156 |
MS.gene81765.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.54e-49 | 156 |
MS.gene81765.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.54e-49 | 156 |
MS.gene81765.t1 | MTR_1g066390 | 100.000 | 76 | 0 | 0 | 1 | 76 | 153 | 228 | 8.47e-49 | 156 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.27e-48 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.27e-48 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.27e-48 | 157 |
MS.gene81765.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.39e-48 | 155 |
MS.gene81765.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 2.56e-48 | 154 |
MS.gene81765.t1 | MTR_4g080920 | 69.737 | 76 | 23 | 0 | 1 | 76 | 153 | 228 | 5.76e-30 | 107 |
MS.gene81765.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.73e-48 | 156 |
MS.gene81765.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.73e-48 | 156 |
MS.gene81765.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 214 | 290 | 3.61e-48 | 156 |
MS.gene81765.t1 | MTR_6g061930 | 76.623 | 77 | 3 | 1 | 1 | 77 | 153 | 214 | 1.26e-31 | 113 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 49 | 125 | 3.06e-48 | 156 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 125 | 201 | 3.06e-48 | 156 |
MS.gene81765.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 201 | 277 | 3.97e-48 | 155 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.19e-48 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.19e-48 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.19e-48 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 4.81e-48 | 156 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.89e-48 | 155 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.89e-48 | 155 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 4.89e-48 | 155 |
MS.gene81765.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.76e-47 | 157 |
MS.gene81765.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.76e-47 | 157 |
MS.gene81765.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.76e-47 | 157 |
MS.gene81765.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.76e-47 | 157 |
MS.gene81765.t1 | MTR_8g081020 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.65e-47 | 156 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.78e-47 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.78e-47 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.78e-47 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.78e-47 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.68e-47 | 156 |
MS.gene81765.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene81765.t1 | MTR_4g091580 | 97.403 | 77 | 2 | 0 | 1 | 77 | 229 | 305 | 5.42e-47 | 155 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.44e-46 | 157 |
MS.gene81765.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 457 | 532 | 3.63e-46 | 156 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.52e-46 | 157 |
MS.gene81765.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.37e-46 | 156 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.65e-46 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.65e-46 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.65e-46 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.65e-46 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.65e-46 | 157 |
MS.gene81765.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.55e-46 | 156 |
MS.gene81765.t1 | MTR_4g091580 | 96.104 | 77 | 3 | 0 | 1 | 77 | 305 | 381 | 1.00e-44 | 152 |
MS.gene81765.t1 | MTR_8g479250 | 96.104 | 77 | 3 | 0 | 1 | 77 | 141 | 217 | 1.09e-45 | 150 |
MS.gene81765.t1 | MTR_8g479250 | 76.389 | 72 | 6 | 1 | 1 | 72 | 217 | 277 | 6.83e-27 | 101 |
MS.gene81765.t1 | MTR_8g479250 | 100.000 | 41 | 0 | 0 | 1 | 41 | 1 | 41 | 1.21e-20 | 85.1 |
MS.gene81765.t1 | MTR_8g479250 | 91.429 | 35 | 3 | 0 | 43 | 77 | 107 | 141 | 1.11e-14 | 68.9 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 533 | 609 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 609 | 685 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 685 | 761 | 2.16e-45 | 157 |
MS.gene81765.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 761 | 837 | 2.88e-45 | 156 |
MS.gene81765.t1 | MTR_4g088495 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 4.96e-44 | 153 |
MS.gene81765.t1 | MTR_1g046640 | 71.053 | 76 | 22 | 0 | 1 | 76 | 240 | 315 | 3.01e-28 | 105 |
MS.gene81765.t1 | MTR_5g076810 | 68.831 | 77 | 23 | 1 | 1 | 76 | 194 | 270 | 1.09e-27 | 103 |
MS.gene81765.t1 | MTR_5g076660 | 69.863 | 73 | 22 | 0 | 1 | 73 | 266 | 338 | 8.62e-27 | 102 |
MS.gene81765.t1 | MTR_5g067400 | 68.421 | 76 | 24 | 0 | 1 | 76 | 241 | 316 | 1.74e-25 | 98.2 |
MS.gene81765.t1 | MTR_5g061310 | 60.000 | 75 | 30 | 0 | 1 | 75 | 2 | 76 | 4.97e-25 | 90.9 |
MS.gene81765.t1 | MTR_5g076370 | 64.384 | 73 | 26 | 0 | 1 | 73 | 267 | 339 | 3.83e-23 | 92.4 |
MS.gene81765.t1 | MTR_2g038430 | 61.333 | 75 | 29 | 0 | 1 | 75 | 268 | 342 | 5.57e-23 | 92.0 |
MS.gene81765.t1 | MTR_5g076505 | 61.333 | 75 | 29 | 0 | 1 | 75 | 240 | 314 | 8.04e-23 | 90.9 |
MS.gene81765.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 171 | 246 | 3.44e-22 | 88.2 |
MS.gene81765.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 4.89e-22 | 89.0 |
MS.gene81765.t1 | MTR_5g076720 | 65.333 | 75 | 26 | 0 | 1 | 75 | 315 | 389 | 6.25e-22 | 89.4 |
MS.gene81765.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 6.95e-22 | 88.6 |
MS.gene81765.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 271 | 346 | 9.51e-22 | 88.6 |
MS.gene81765.t1 | MTR_5g076740 | 59.211 | 76 | 30 | 1 | 1 | 75 | 86 | 161 | 1.13e-21 | 84.7 |
MS.gene81765.t1 | MTR_2g038420 | 60.000 | 75 | 30 | 0 | 1 | 75 | 260 | 334 | 1.35e-21 | 88.2 |
MS.gene81765.t1 | MTR_7g094390 | 58.667 | 75 | 31 | 0 | 1 | 75 | 402 | 476 | 8.93e-21 | 86.7 |
MS.gene81765.t1 | MTR_5g076520 | 57.333 | 75 | 31 | 1 | 1 | 74 | 244 | 318 | 3.43e-19 | 81.3 |
MS.gene81765.t1 | MTR_7g024290 | 60.526 | 76 | 29 | 1 | 1 | 75 | 241 | 316 | 8.99e-19 | 80.1 |
MS.gene81765.t1 | MTR_4g009980 | 55.224 | 67 | 30 | 0 | 9 | 75 | 4 | 70 | 5.06e-18 | 72.8 |
MS.gene81765.t1 | MTR_5g061290 | 53.333 | 75 | 35 | 0 | 1 | 75 | 252 | 326 | 6.95e-18 | 77.8 |
MS.gene81765.t1 | MTR_5g079360 | 70.213 | 47 | 14 | 0 | 50 | 96 | 9 | 55 | 4.53e-17 | 70.1 |
MS.gene81765.t1 | MTR_5g076350 | 48.684 | 76 | 38 | 1 | 1 | 75 | 8 | 83 | 1.16e-15 | 67.4 |
MS.gene81765.t1 | MTR_5g076760 | 59.649 | 57 | 23 | 0 | 11 | 67 | 5 | 61 | 4.47e-15 | 65.9 |
MS.gene81765.t1 | MTR_5g076780 | 58.333 | 60 | 25 | 0 | 15 | 74 | 4 | 63 | 5.66e-15 | 65.1 |
MS.gene81765.t1 | MTR_5g076340 | 50.649 | 77 | 36 | 2 | 1 | 75 | 9 | 85 | 1.24e-14 | 64.7 |
MS.gene81765.t1 | MTR_4g080783 | 76.471 | 34 | 8 | 0 | 44 | 77 | 7 | 40 | 6.78e-12 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81765.t1 | AT3G52590 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
MS.gene81765.t1 | AT2G36170 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
MS.gene81765.t1 | AT2G35635 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.81e-50 | 155 |
MS.gene81765.t1 | AT2G35635 | 60.526 | 76 | 30 | 0 | 3 | 78 | 79 | 154 | 2.00e-26 | 96.7 |
MS.gene81765.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
MS.gene81765.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
MS.gene81765.t1 | AT1G31340 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.51e-49 | 155 |
MS.gene81765.t1 | AT1G31340 | 62.667 | 75 | 28 | 0 | 3 | 77 | 79 | 153 | 5.16e-27 | 98.6 |
MS.gene81765.t1 | AT3G62250 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.70e-49 | 155 |
MS.gene81765.t1 | AT1G23410 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.71e-49 | 155 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
MS.gene81765.t1 | AT1G55060 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.90e-48 | 155 |
MS.gene81765.t1 | AT1G55060 | 97.368 | 76 | 2 | 0 | 1 | 76 | 153 | 228 | 2.46e-46 | 149 |
MS.gene81765.t1 | AT1G55060 | 85.714 | 77 | 11 | 0 | 1 | 77 | 1 | 77 | 2.30e-42 | 139 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
MS.gene81765.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
MS.gene81765.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
MS.gene81765.t1 | AT1G65350 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 6.13e-48 | 156 |
MS.gene81765.t1 | AT1G65350 | 97.403 | 77 | 2 | 0 | 1 | 77 | 152 | 228 | 9.26e-47 | 153 |
MS.gene81765.t1 | AT1G65350 | 97.403 | 77 | 1 | 1 | 1 | 77 | 77 | 152 | 6.86e-45 | 148 |
MS.gene81765.t1 | AT1G65350 | 80.000 | 90 | 4 | 1 | 1 | 76 | 228 | 317 | 6.05e-39 | 133 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.97e-47 | 157 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.97e-47 | 157 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.97e-47 | 157 |
MS.gene81765.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.97e-47 | 157 |
MS.gene81765.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.96e-47 | 156 |
MS.gene81765.t1 | AT5G37640 | 96.104 | 77 | 3 | 0 | 1 | 77 | 79 | 155 | 4.64e-47 | 154 |
MS.gene81765.t1 | AT5G37640 | 92.208 | 77 | 6 | 0 | 1 | 77 | 155 | 231 | 6.93e-43 | 143 |
MS.gene81765.t1 | AT5G37640 | 92.208 | 77 | 5 | 1 | 1 | 76 | 231 | 307 | 8.36e-41 | 138 |
MS.gene81765.t1 | AT5G37640 | 77.922 | 77 | 17 | 0 | 1 | 77 | 3 | 79 | 5.00e-34 | 120 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
MS.gene81765.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
MS.gene81765.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
MS.gene81765.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
MS.gene81765.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
MS.gene81765.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
MS.gene81765.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
MS.gene81765.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
MS.gene81765.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
MS.gene81765.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
MS.gene81765.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
MS.gene81765.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
MS.gene81765.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
MS.gene81765.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
MS.gene81765.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
MS.gene81765.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
MS.gene81765.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
MS.gene81765.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
MS.gene81765.t1 | AT1G53930 | 75.342 | 73 | 18 | 0 | 1 | 73 | 86 | 158 | 6.40e-33 | 113 |
MS.gene81765.t1 | AT1G53950 | 61.972 | 71 | 27 | 0 | 1 | 71 | 69 | 139 | 2.72e-25 | 93.6 |
MS.gene81765.t1 | AT1G11980 | 55.263 | 76 | 34 | 0 | 1 | 76 | 1 | 76 | 2.81e-24 | 89.0 |
MS.gene81765.t1 | AT1G53945 | 46.269 | 67 | 36 | 0 | 1 | 67 | 46 | 112 | 7.40e-13 | 61.2 |
MS.gene81765.t1 | AT4G12570 | 38.667 | 75 | 45 | 1 | 1 | 74 | 95 | 169 | 4.20e-12 | 62.4 |
MS.gene81765.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
MS.gene81765.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
Find 28 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTGTCTTGAATCT+TGG | 0.270573 | 1.3:-43311609 | None:intergenic |
ATCTACTTAATCTTCTTCTT+TGG | 0.272953 | 1.3:-43312602 | None:intergenic |
TGAGCCTTCTTTGATGGCTT+TGG | 0.275825 | 1.3:+43311918 | MS.gene81765:CDS |
TATTATTGAGCCTTCTTTGA+TGG | 0.284394 | 1.3:+43311912 | MS.gene81765:CDS |
GAGTAATCGTCTTCCCTGTT+AGG | 0.315119 | 1.3:-43311547 | None:intergenic |
TTCCTGCAGTTCACAGCCCT+TGG | 0.384485 | 1.3:-43312441 | None:intergenic |
CTACATTGCATCTTGTGCTT+AGG | 0.389612 | 1.3:+43311878 | MS.gene81765:CDS |
AAAATCAAACGCTGCTGATC+CGG | 0.410821 | 1.3:-43311708 | None:intergenic |
AGCTGATTACAATATTCAAA+AGG | 0.429612 | 1.3:+43311764 | MS.gene81765:CDS |
AGTAATCGTCTTCCCTGTTA+GGG | 0.439791 | 1.3:-43311546 | None:intergenic |
GAAGTGTGGTCACAGTAATC+AGG | 0.450078 | 1.3:+43312467 | MS.gene81765:CDS |
CATCTTGTGCTTAGGCTTCG+TGG | 0.456490 | 1.3:+43311886 | MS.gene81765:CDS |
TTTGAATATTGTAATCAGCT+AGG | 0.470075 | 1.3:-43311761 | None:intergenic |
ATCCAAGGGCTGTGAACTGC+AGG | 0.470105 | 1.3:+43312439 | MS.gene81765:CDS |
TTGAATATTGTAATCAGCTA+GGG | 0.472034 | 1.3:-43311760 | None:intergenic |
GCTGGAAAACAGCTTGAAGA+TGG | 0.489439 | 1.3:+43311732 | MS.gene81765:CDS |
GCTATGCTCGTCTGCATCCA+AGG | 0.492282 | 1.3:+43312424 | MS.gene81765:CDS |
CTTCTTTGATGGCTTTGGCT+AGG | 0.506162 | 1.3:+43311923 | MS.gene81765:CDS |
GCTGATTACAATATTCAAAA+GGG | 0.521878 | 1.3:+43311765 | MS.gene81765:CDS |
ATCAAACGCTGCTGATCCGG+TGG | 0.525986 | 1.3:-43311705 | None:intergenic |
CTAGCCAAAGCCATCAAAGA+AGG | 0.530966 | 1.3:-43311922 | None:intergenic |
CTTGGCTTTGACATTGTCGA+TGG | 0.532900 | 1.3:-43311591 | None:intergenic |
AGGAACATACTTGCGGCAGA+TGG | 0.561328 | 1.3:-43311965 | None:intergenic |
GCCAAGATTCAAGACAAAGA+AGG | 0.569347 | 1.3:+43311608 | MS.gene81765:CDS |
CTATGCTCGTCTGCATCCAA+GGG | 0.587050 | 1.3:+43312425 | MS.gene81765:CDS |
TGATTATCCAGGTATCCCAC+CGG | 0.589942 | 1.3:+43311689 | MS.gene81765:intron |
TCAAACGCTGCTGATCCGGT+GGG | 0.663490 | 1.3:-43311704 | None:intergenic |
CTTGTGCTTAGGCTTCGTGG+TGG | 0.730767 | 1.3:+43311889 | MS.gene81765:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAGCAAAAAATAAAAA+AGG | - | chr1.3:43312003-43312022 | None:intergenic | 10.0% |
!!! | TTTATTTTTTGCTTAATTTT+AGG | + | chr1.3:43312005-43312024 | MS.gene81765:intron | 10.0% |
!! | AAAAAACTAAAAATATAGAG+TGG | - | chr1.3:43312505-43312524 | None:intergenic | 15.0% |
!! | ATGAAAGAAAAGAAAAAAAA+TGG | - | chr1.3:43312388-43312407 | None:intergenic | 15.0% |
!!! | TTTTTCTTTTCTTTCATTTT+TGG | + | chr1.3:43312391-43312410 | MS.gene81765:intron | 15.0% |
!! | ATAAAAAATGCAAAATGATG+AGG | - | chr1.3:43311806-43311825 | None:intergenic | 20.0% |
!! | ATAATATGTTGAAAGTTAGA+GGG | + | chr1.3:43312318-43312337 | MS.gene81765:intron | 20.0% |
!! | TATAATATGTTGAAAGTTAG+AGG | + | chr1.3:43312317-43312336 | MS.gene81765:intron | 20.0% |
!!! | CTCAAATACGATTAATTTTT+AGG | + | chr1.3:43312047-43312066 | MS.gene81765:intron | 20.0% |
!!! | TTTTGCTTAATTTTAGGTTA+TGG | + | chr1.3:43312011-43312030 | MS.gene81765:intron | 20.0% |
! | AGCTGATTACAATATTCAAA+AGG | + | chr1.3:43311764-43311783 | MS.gene81765:CDS | 25.0% |
! | GCAAAAAATAAAAAAGGTGA+AGG | - | chr1.3:43311997-43312016 | None:intergenic | 25.0% |
! | GCTGATTACAATATTCAAAA+GGG | + | chr1.3:43311765-43311784 | MS.gene81765:CDS | 25.0% |
! | TTCAGTATAATCATATGTGT+CGG | + | chr1.3:43312195-43312214 | MS.gene81765:intron | 25.0% |
! | TTGAATATTGTAATCAGCTA+GGG | - | chr1.3:43311763-43311782 | None:intergenic | 25.0% |
! | TTTGAATATTGTAATCAGCT+AGG | - | chr1.3:43311764-43311783 | None:intergenic | 25.0% |
!! | ACATGACTACATTTTTACAT+TGG | + | chr1.3:43312278-43312297 | MS.gene81765:intron | 25.0% |
!! | ACATTGGCATTTAAGATTAA+TGG | + | chr1.3:43312294-43312313 | MS.gene81765:intron | 25.0% |
!! | AGTGTGAAACTATTTTACAT+TGG | + | chr1.3:43312356-43312375 | MS.gene81765:intron | 25.0% |
ACCGACACAGATAATAATTT+GGG | + | chr1.3:43312160-43312179 | MS.gene81765:intron | 30.0% | |
TATTATTGAGCCTTCTTTGA+TGG | + | chr1.3:43311912-43311931 | MS.gene81765:CDS | 30.0% | |
TCCCAAATTATTATCTGTGT+CGG | - | chr1.3:43312164-43312183 | None:intergenic | 30.0% | |
!! | TCTGACATTTTTGATTATCC+AGG | + | chr1.3:43311678-43311697 | MS.gene81765:intron | 30.0% |
ACCTTCTTTGTCTTGAATCT+TGG | - | chr1.3:43311612-43311631 | None:intergenic | 35.0% | |
CACCGACACAGATAATAATT+TGG | + | chr1.3:43312159-43312178 | MS.gene81765:intron | 35.0% | |
GAAAGTTAGAGGGTTGTTAT+TGG | + | chr1.3:43312328-43312347 | MS.gene81765:intron | 35.0% | |
! | ATAATCATATGTGTCGGTGT+TGG | + | chr1.3:43312201-43312220 | MS.gene81765:intron | 35.0% |
! | ATTTTCGTGAAAACCCTAAC+AGG | + | chr1.3:43311533-43311552 | MS.gene81765:CDS | 35.0% |
! | TTTTCGTGAAAACCCTAACA+GGG | + | chr1.3:43311534-43311553 | MS.gene81765:CDS | 35.0% |
AAAAAAGGTGAAGGTTGCAG+AGG | - | chr1.3:43311988-43312007 | None:intergenic | 40.0% | |
AAAATCAAACGCTGCTGATC+CGG | - | chr1.3:43311711-43311730 | None:intergenic | 40.0% | |
AACTGCAGGAAAAAGAAGTG+TGG | + | chr1.3:43312453-43312472 | MS.gene81765:CDS | 40.0% | |
AGTAATCGTCTTCCCTGTTA+GGG | - | chr1.3:43311549-43311568 | None:intergenic | 40.0% | |
CTACATTGCATCTTGTGCTT+AGG | + | chr1.3:43311878-43311897 | MS.gene81765:CDS | 40.0% | |
GCCAAGATTCAAGACAAAGA+AGG | + | chr1.3:43311608-43311627 | MS.gene81765:CDS | 40.0% | |
CATACATCGTCTTGCAGTTG+AGG | + | chr1.3:43312579-43312598 | MS.gene81765:intron | 45.0% | |
CTAGCCAAAGCCATCAAAGA+AGG | - | chr1.3:43311925-43311944 | None:intergenic | 45.0% | |
CTCAACTGCAAGACGATGTA+TGG | - | chr1.3:43312581-43312600 | None:intergenic | 45.0% | |
GAAGTGTGGTCACAGTAATC+AGG | + | chr1.3:43312467-43312486 | MS.gene81765:CDS | 45.0% | |
GAGTAATCGTCTTCCCTGTT+AGG | - | chr1.3:43311550-43311569 | None:intergenic | 45.0% | |
GCTGGAAAACAGCTTGAAGA+TGG | + | chr1.3:43311732-43311751 | MS.gene81765:CDS | 45.0% | |
GTCATGTGACCTATGAAGCA+CGG | - | chr1.3:43312265-43312284 | None:intergenic | 45.0% | |
GTTGCAGAGGAACATACTTG+CGG | - | chr1.3:43311975-43311994 | None:intergenic | 45.0% | |
TCCGATGCATATCCAACACT+GGG | + | chr1.3:43312226-43312245 | MS.gene81765:intron | 45.0% | |
TGATTATCCAGGTATCCCAC+CGG | + | chr1.3:43311689-43311708 | MS.gene81765:intron | 45.0% | |
! | TCCCAGTGTTGGATATGCAT+CGG | - | chr1.3:43312230-43312249 | None:intergenic | 45.0% |
! | TGAGCCTTCTTTGATGGCTT+TGG | + | chr1.3:43311918-43311937 | MS.gene81765:CDS | 45.0% |
! | TGTCGGTGTTTGTGCTTCAT+AGG | - | chr1.3:43312147-43312166 | None:intergenic | 45.0% |
!! | CAGCAGCGTTTGATTTTTGC+TGG | + | chr1.3:43311714-43311733 | MS.gene81765:CDS | 45.0% |
!! | CTTCTTTGATGGCTTTGGCT+AGG | + | chr1.3:43311923-43311942 | MS.gene81765:CDS | 45.0% |
!! | CTTGGCTTTGACATTGTCGA+TGG | - | chr1.3:43311594-43311613 | None:intergenic | 45.0% |
!!! | AAATTTTAATTTTGATTTAT+TGG | + | chr1.3:43311835-43311854 | MS.gene81765:intron | 5.0% |
ACCTAGTGTCCGTGCTTCAT+AGG | + | chr1.3:43312253-43312272 | MS.gene81765:intron | 50.0% | |
ACCTATGAAGCACGGACACT+AGG | - | chr1.3:43312257-43312276 | None:intergenic | 50.0% | |
AGGAACATACTTGCGGCAGA+TGG | - | chr1.3:43311968-43311987 | None:intergenic | 50.0% | |
CATCTTGTGCTTAGGCTTCG+TGG | + | chr1.3:43311886-43311905 | MS.gene81765:CDS | 50.0% | |
CTATGCTCGTCTGCATCCAA+GGG | + | chr1.3:43312425-43312444 | MS.gene81765:CDS | 50.0% | |
CTCCGATGCATATCCAACAC+TGG | + | chr1.3:43312225-43312244 | MS.gene81765:intron | 50.0% | |
ATCAAACGCTGCTGATCCGG+TGG | - | chr1.3:43311708-43311727 | None:intergenic | 55.0% | |
ATCCAAGGGCTGTGAACTGC+AGG | + | chr1.3:43312439-43312458 | MS.gene81765:CDS | 55.0% | |
CACTAGGTGTCTCCCAGTGT+TGG | - | chr1.3:43312241-43312260 | None:intergenic | 55.0% | |
CTTGTGCTTAGGCTTCGTGG+TGG | + | chr1.3:43311889-43311908 | MS.gene81765:CDS | 55.0% | |
GCTATGCTCGTCTGCATCCA+AGG | + | chr1.3:43312424-43312443 | MS.gene81765:CDS | 55.0% | |
TCAAACGCTGCTGATCCGGT+GGG | - | chr1.3:43311707-43311726 | None:intergenic | 55.0% | |
TTCCTGCAGTTCACAGCCCT+TGG | - | chr1.3:43312444-43312463 | None:intergenic | 55.0% | |
TGCTGATCCGGTGGGATACC+TGG | - | chr1.3:43311699-43311718 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 43311527 | 43312622 | 43311527 | ID=MS.gene81765 |
chr1.3 | mRNA | 43311527 | 43312622 | 43311527 | ID=MS.gene81765.t1;Parent=MS.gene81765 |
chr1.3 | exon | 43311527 | 43311629 | 43311527 | ID=MS.gene81765.t1.exon1;Parent=MS.gene81765.t1 |
chr1.3 | CDS | 43311527 | 43311629 | 43311527 | ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1 |
chr1.3 | exon | 43311700 | 43311786 | 43311700 | ID=MS.gene81765.t1.exon2;Parent=MS.gene81765.t1 |
chr1.3 | CDS | 43311700 | 43311786 | 43311700 | ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1 |
chr1.3 | exon | 43311875 | 43311977 | 43311875 | ID=MS.gene81765.t1.exon3;Parent=MS.gene81765.t1 |
chr1.3 | CDS | 43311875 | 43311977 | 43311875 | ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1 |
chr1.3 | exon | 43312422 | 43312488 | 43312422 | ID=MS.gene81765.t1.exon4;Parent=MS.gene81765.t1 |
chr1.3 | CDS | 43312422 | 43312488 | 43312422 | ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1 |
chr1.3 | exon | 43312596 | 43312622 | 43312596 | ID=MS.gene81765.t1.exon5;Parent=MS.gene81765.t1 |
chr1.3 | CDS | 43312596 | 43312622 | 43312596 | ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1 |
Gene Sequence |
Protein sequence |