AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81765


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81765.t1 MTR_7g105080 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene81765.t1 MTR_3g092130 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene81765.t1 MTR_1g059690 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene81765.t1 MTR_3g092130 98.361 122 2 0 1 122 1 122 2.83e-87 250
MS.gene81765.t1 MTR_5g092700 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene81765.t1 MTR_5g092700 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene81765.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene81765.t1 MTR_4g073580 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene81765.t1 MTR_8g088060 100.000 76 0 0 1 76 1 76 1.45e-49 155
MS.gene81765.t1 MTR_5g033960 100.000 76 0 0 1 76 1 76 1.55e-49 155
MS.gene81765.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 3.56e-49 155
MS.gene81765.t1 MTR_4g073580 44.231 104 28 1 3 76 79 182 6.31e-20 80.9
MS.gene81765.t1 MTR_4g088485 98.701 77 1 0 1 77 1 77 4.21e-49 156
MS.gene81765.t1 MTR_4g088485 98.701 77 1 0 1 77 138 214 5.53e-49 155
MS.gene81765.t1 MTR_4g088485 79.221 77 1 1 1 77 77 138 3.49e-34 118
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 1 77 4.74e-49 156
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 77 153 4.74e-49 156
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 153 229 6.35e-49 156
MS.gene81765.t1 MTR_1g066390 98.701 77 1 0 1 77 1 77 5.54e-49 156
MS.gene81765.t1 MTR_1g066390 98.701 77 1 0 1 77 77 153 5.54e-49 156
MS.gene81765.t1 MTR_1g066390 100.000 76 0 0 1 76 153 228 8.47e-49 156
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.27e-48 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.27e-48 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.27e-48 157
MS.gene81765.t1 MTR_4g080920 97.403 77 2 0 1 77 77 153 1.39e-48 155
MS.gene81765.t1 MTR_4g080920 97.403 77 2 0 1 77 1 77 2.56e-48 154
MS.gene81765.t1 MTR_4g080920 69.737 76 23 0 1 76 153 228 5.76e-30 107
MS.gene81765.t1 MTR_6g061930 98.701 77 1 0 1 77 1 77 2.73e-48 156
MS.gene81765.t1 MTR_6g061930 98.701 77 1 0 1 77 77 153 2.73e-48 156
MS.gene81765.t1 MTR_6g061930 98.701 77 1 0 1 77 214 290 3.61e-48 156
MS.gene81765.t1 MTR_6g061930 76.623 77 3 1 1 77 153 214 1.26e-31 113
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 49 125 3.06e-48 156
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 125 201 3.06e-48 156
MS.gene81765.t1 MTR_7g116360 98.701 77 1 0 1 77 201 277 3.97e-48 155
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 3.19e-48 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 3.19e-48 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 3.19e-48 157
MS.gene81765.t1 MTR_4g081010 100.000 76 0 0 1 76 229 304 4.81e-48 156
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 4.89e-48 155
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 4.89e-48 155
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 4.89e-48 155
MS.gene81765.t1 MTR_8g081020 98.701 77 1 0 1 77 1 77 1.76e-47 157
MS.gene81765.t1 MTR_8g081020 98.701 77 1 0 1 77 77 153 1.76e-47 157
MS.gene81765.t1 MTR_8g081020 98.701 77 1 0 1 77 153 229 1.76e-47 157
MS.gene81765.t1 MTR_8g081020 98.701 77 1 0 1 77 229 305 1.76e-47 157
MS.gene81765.t1 MTR_8g081020 100.000 76 0 0 1 76 305 380 2.65e-47 156
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 1.78e-47 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 1.78e-47 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 1.78e-47 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 1.78e-47 157
MS.gene81765.t1 MTR_4g081010 100.000 76 0 0 1 76 305 380 2.68e-47 156
MS.gene81765.t1 MTR_4g080797 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene81765.t1 MTR_4g080797 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene81765.t1 MTR_4g080797 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene81765.t1 MTR_4g080797 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene81765.t1 MTR_4g080797 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene81765.t1 MTR_4g091580 97.403 77 2 0 1 77 229 305 5.42e-47 155
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 305 381 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 98.701 77 1 0 1 77 381 457 2.44e-46 157
MS.gene81765.t1 MTR_4g081010 100.000 76 0 0 1 76 457 532 3.63e-46 156
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 2.52e-46 157
MS.gene81765.t1 MTR_8g018230 98.701 77 1 0 1 77 457 533 3.37e-46 156
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 2.65e-46 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 2.65e-46 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 2.65e-46 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 229 305 2.65e-46 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 381 457 2.65e-46 157
MS.gene81765.t1 MTR_4g091580 98.701 77 1 0 1 77 457 533 3.55e-46 156
MS.gene81765.t1 MTR_4g091580 96.104 77 3 0 1 77 305 381 1.00e-44 152
MS.gene81765.t1 MTR_8g479250 96.104 77 3 0 1 77 141 217 1.09e-45 150
MS.gene81765.t1 MTR_8g479250 76.389 72 6 1 1 72 217 277 6.83e-27 101
MS.gene81765.t1 MTR_8g479250 100.000 41 0 0 1 41 1 41 1.21e-20 85.1
MS.gene81765.t1 MTR_8g479250 91.429 35 3 0 43 77 107 141 1.11e-14 68.9
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 77 153 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 153 229 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 229 305 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 305 381 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 381 457 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 457 533 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 533 609 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 609 685 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 685 761 2.16e-45 157
MS.gene81765.t1 MTR_4g088495 98.701 77 1 0 1 77 761 837 2.88e-45 156
MS.gene81765.t1 MTR_4g088495 97.403 77 2 0 1 77 1 77 4.96e-44 153
MS.gene81765.t1 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.01e-28 105
MS.gene81765.t1 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.09e-27 103
MS.gene81765.t1 MTR_5g076660 69.863 73 22 0 1 73 266 338 8.62e-27 102
MS.gene81765.t1 MTR_5g067400 68.421 76 24 0 1 76 241 316 1.74e-25 98.2
MS.gene81765.t1 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.97e-25 90.9
MS.gene81765.t1 MTR_5g076370 64.384 73 26 0 1 73 267 339 3.83e-23 92.4
MS.gene81765.t1 MTR_2g038430 61.333 75 29 0 1 75 268 342 5.57e-23 92.0
MS.gene81765.t1 MTR_5g076505 61.333 75 29 0 1 75 240 314 8.04e-23 90.9
MS.gene81765.t1 MTR_1g046650 57.895 76 32 0 1 76 171 246 3.44e-22 88.2
MS.gene81765.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 4.89e-22 89.0
MS.gene81765.t1 MTR_5g076720 65.333 75 26 0 1 75 315 389 6.25e-22 89.4
MS.gene81765.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 6.95e-22 88.6
MS.gene81765.t1 MTR_1g046650 57.895 76 32 0 1 76 271 346 9.51e-22 88.6
MS.gene81765.t1 MTR_5g076740 59.211 76 30 1 1 75 86 161 1.13e-21 84.7
MS.gene81765.t1 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.35e-21 88.2
MS.gene81765.t1 MTR_7g094390 58.667 75 31 0 1 75 402 476 8.93e-21 86.7
MS.gene81765.t1 MTR_5g076520 57.333 75 31 1 1 74 244 318 3.43e-19 81.3
MS.gene81765.t1 MTR_7g024290 60.526 76 29 1 1 75 241 316 8.99e-19 80.1
MS.gene81765.t1 MTR_4g009980 55.224 67 30 0 9 75 4 70 5.06e-18 72.8
MS.gene81765.t1 MTR_5g061290 53.333 75 35 0 1 75 252 326 6.95e-18 77.8
MS.gene81765.t1 MTR_5g079360 70.213 47 14 0 50 96 9 55 4.53e-17 70.1
MS.gene81765.t1 MTR_5g076350 48.684 76 38 1 1 75 8 83 1.16e-15 67.4
MS.gene81765.t1 MTR_5g076760 59.649 57 23 0 11 67 5 61 4.47e-15 65.9
MS.gene81765.t1 MTR_5g076780 58.333 60 25 0 15 74 4 63 5.66e-15 65.1
MS.gene81765.t1 MTR_5g076340 50.649 77 36 2 1 75 9 85 1.24e-14 64.7
MS.gene81765.t1 MTR_4g080783 76.471 34 8 0 44 77 7 40 6.78e-12 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81765.t1 AT3G52590 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene81765.t1 AT2G36170 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene81765.t1 AT2G35635 100.000 76 0 0 1 76 1 76 9.81e-50 155
MS.gene81765.t1 AT2G35635 60.526 76 30 0 3 78 79 154 2.00e-26 96.7
MS.gene81765.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene81765.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene81765.t1 AT1G31340 100.000 76 0 0 1 76 1 76 1.51e-49 155
MS.gene81765.t1 AT1G31340 62.667 75 28 0 3 77 79 153 5.16e-27 98.6
MS.gene81765.t1 AT3G62250 100.000 76 0 0 1 76 1 76 1.70e-49 155
MS.gene81765.t1 AT1G23410 100.000 76 0 0 1 76 1 76 1.71e-49 155
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene81765.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene81765.t1 AT1G55060 97.403 77 2 0 1 77 77 153 1.90e-48 155
MS.gene81765.t1 AT1G55060 97.368 76 2 0 1 76 153 228 2.46e-46 149
MS.gene81765.t1 AT1G55060 85.714 77 11 0 1 77 1 77 2.30e-42 139
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene81765.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene81765.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene81765.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene81765.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene81765.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene81765.t1 AT5G20620 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene81765.t1 AT1G65350 98.701 77 1 0 1 77 1 77 6.13e-48 156
MS.gene81765.t1 AT1G65350 97.403 77 2 0 1 77 152 228 9.26e-47 153
MS.gene81765.t1 AT1G65350 97.403 77 1 1 1 77 77 152 6.86e-45 148
MS.gene81765.t1 AT1G65350 80.000 90 4 1 1 76 228 317 6.05e-39 133
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 1 77 1.97e-47 157
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 77 153 1.97e-47 157
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 153 229 1.97e-47 157
MS.gene81765.t1 AT5G20620 98.701 77 1 0 1 77 229 305 1.97e-47 157
MS.gene81765.t1 AT5G20620 100.000 76 0 0 1 76 305 380 2.96e-47 156
MS.gene81765.t1 AT5G37640 96.104 77 3 0 1 77 79 155 4.64e-47 154
MS.gene81765.t1 AT5G37640 92.208 77 6 0 1 77 155 231 6.93e-43 143
MS.gene81765.t1 AT5G37640 92.208 77 5 1 1 76 231 307 8.36e-41 138
MS.gene81765.t1 AT5G37640 77.922 77 17 0 1 77 3 79 5.00e-34 120
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene81765.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene81765.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene81765.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene81765.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene81765.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene81765.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene81765.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene81765.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene81765.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene81765.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene81765.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene81765.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene81765.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene81765.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene81765.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene81765.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene81765.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene81765.t1 AT1G53930 75.342 73 18 0 1 73 86 158 6.40e-33 113
MS.gene81765.t1 AT1G53950 61.972 71 27 0 1 71 69 139 2.72e-25 93.6
MS.gene81765.t1 AT1G11980 55.263 76 34 0 1 76 1 76 2.81e-24 89.0
MS.gene81765.t1 AT1G53945 46.269 67 36 0 1 67 46 112 7.40e-13 61.2
MS.gene81765.t1 AT4G12570 38.667 75 45 1 1 74 95 169 4.20e-12 62.4
MS.gene81765.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6
MS.gene81765.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6

Find 28 sgRNAs with CRISPR-Local

Find 66 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCTTTGTCTTGAATCT+TGG 0.270573 1.3:-43311609 None:intergenic
ATCTACTTAATCTTCTTCTT+TGG 0.272953 1.3:-43312602 None:intergenic
TGAGCCTTCTTTGATGGCTT+TGG 0.275825 1.3:+43311918 MS.gene81765:CDS
TATTATTGAGCCTTCTTTGA+TGG 0.284394 1.3:+43311912 MS.gene81765:CDS
GAGTAATCGTCTTCCCTGTT+AGG 0.315119 1.3:-43311547 None:intergenic
TTCCTGCAGTTCACAGCCCT+TGG 0.384485 1.3:-43312441 None:intergenic
CTACATTGCATCTTGTGCTT+AGG 0.389612 1.3:+43311878 MS.gene81765:CDS
AAAATCAAACGCTGCTGATC+CGG 0.410821 1.3:-43311708 None:intergenic
AGCTGATTACAATATTCAAA+AGG 0.429612 1.3:+43311764 MS.gene81765:CDS
AGTAATCGTCTTCCCTGTTA+GGG 0.439791 1.3:-43311546 None:intergenic
GAAGTGTGGTCACAGTAATC+AGG 0.450078 1.3:+43312467 MS.gene81765:CDS
CATCTTGTGCTTAGGCTTCG+TGG 0.456490 1.3:+43311886 MS.gene81765:CDS
TTTGAATATTGTAATCAGCT+AGG 0.470075 1.3:-43311761 None:intergenic
ATCCAAGGGCTGTGAACTGC+AGG 0.470105 1.3:+43312439 MS.gene81765:CDS
TTGAATATTGTAATCAGCTA+GGG 0.472034 1.3:-43311760 None:intergenic
GCTGGAAAACAGCTTGAAGA+TGG 0.489439 1.3:+43311732 MS.gene81765:CDS
GCTATGCTCGTCTGCATCCA+AGG 0.492282 1.3:+43312424 MS.gene81765:CDS
CTTCTTTGATGGCTTTGGCT+AGG 0.506162 1.3:+43311923 MS.gene81765:CDS
GCTGATTACAATATTCAAAA+GGG 0.521878 1.3:+43311765 MS.gene81765:CDS
ATCAAACGCTGCTGATCCGG+TGG 0.525986 1.3:-43311705 None:intergenic
CTAGCCAAAGCCATCAAAGA+AGG 0.530966 1.3:-43311922 None:intergenic
CTTGGCTTTGACATTGTCGA+TGG 0.532900 1.3:-43311591 None:intergenic
AGGAACATACTTGCGGCAGA+TGG 0.561328 1.3:-43311965 None:intergenic
GCCAAGATTCAAGACAAAGA+AGG 0.569347 1.3:+43311608 MS.gene81765:CDS
CTATGCTCGTCTGCATCCAA+GGG 0.587050 1.3:+43312425 MS.gene81765:CDS
TGATTATCCAGGTATCCCAC+CGG 0.589942 1.3:+43311689 MS.gene81765:intron
TCAAACGCTGCTGATCCGGT+GGG 0.663490 1.3:-43311704 None:intergenic
CTTGTGCTTAGGCTTCGTGG+TGG 0.730767 1.3:+43311889 MS.gene81765:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAGCAAAAAATAAAAA+AGG - chr1.3:43312003-43312022 None:intergenic 10.0%
!!! TTTATTTTTTGCTTAATTTT+AGG + chr1.3:43312005-43312024 MS.gene81765:intron 10.0%
!! AAAAAACTAAAAATATAGAG+TGG - chr1.3:43312505-43312524 None:intergenic 15.0%
!! ATGAAAGAAAAGAAAAAAAA+TGG - chr1.3:43312388-43312407 None:intergenic 15.0%
!!! TTTTTCTTTTCTTTCATTTT+TGG + chr1.3:43312391-43312410 MS.gene81765:intron 15.0%
!! ATAAAAAATGCAAAATGATG+AGG - chr1.3:43311806-43311825 None:intergenic 20.0%
!! ATAATATGTTGAAAGTTAGA+GGG + chr1.3:43312318-43312337 MS.gene81765:intron 20.0%
!! TATAATATGTTGAAAGTTAG+AGG + chr1.3:43312317-43312336 MS.gene81765:intron 20.0%
!!! CTCAAATACGATTAATTTTT+AGG + chr1.3:43312047-43312066 MS.gene81765:intron 20.0%
!!! TTTTGCTTAATTTTAGGTTA+TGG + chr1.3:43312011-43312030 MS.gene81765:intron 20.0%
! AGCTGATTACAATATTCAAA+AGG + chr1.3:43311764-43311783 MS.gene81765:CDS 25.0%
! GCAAAAAATAAAAAAGGTGA+AGG - chr1.3:43311997-43312016 None:intergenic 25.0%
! GCTGATTACAATATTCAAAA+GGG + chr1.3:43311765-43311784 MS.gene81765:CDS 25.0%
! TTCAGTATAATCATATGTGT+CGG + chr1.3:43312195-43312214 MS.gene81765:intron 25.0%
! TTGAATATTGTAATCAGCTA+GGG - chr1.3:43311763-43311782 None:intergenic 25.0%
! TTTGAATATTGTAATCAGCT+AGG - chr1.3:43311764-43311783 None:intergenic 25.0%
!! ACATGACTACATTTTTACAT+TGG + chr1.3:43312278-43312297 MS.gene81765:intron 25.0%
!! ACATTGGCATTTAAGATTAA+TGG + chr1.3:43312294-43312313 MS.gene81765:intron 25.0%
!! AGTGTGAAACTATTTTACAT+TGG + chr1.3:43312356-43312375 MS.gene81765:intron 25.0%
ACCGACACAGATAATAATTT+GGG + chr1.3:43312160-43312179 MS.gene81765:intron 30.0%
TATTATTGAGCCTTCTTTGA+TGG + chr1.3:43311912-43311931 MS.gene81765:CDS 30.0%
TCCCAAATTATTATCTGTGT+CGG - chr1.3:43312164-43312183 None:intergenic 30.0%
!! TCTGACATTTTTGATTATCC+AGG + chr1.3:43311678-43311697 MS.gene81765:intron 30.0%
ACCTTCTTTGTCTTGAATCT+TGG - chr1.3:43311612-43311631 None:intergenic 35.0%
CACCGACACAGATAATAATT+TGG + chr1.3:43312159-43312178 MS.gene81765:intron 35.0%
GAAAGTTAGAGGGTTGTTAT+TGG + chr1.3:43312328-43312347 MS.gene81765:intron 35.0%
! ATAATCATATGTGTCGGTGT+TGG + chr1.3:43312201-43312220 MS.gene81765:intron 35.0%
! ATTTTCGTGAAAACCCTAAC+AGG + chr1.3:43311533-43311552 MS.gene81765:CDS 35.0%
! TTTTCGTGAAAACCCTAACA+GGG + chr1.3:43311534-43311553 MS.gene81765:CDS 35.0%
AAAAAAGGTGAAGGTTGCAG+AGG - chr1.3:43311988-43312007 None:intergenic 40.0%
AAAATCAAACGCTGCTGATC+CGG - chr1.3:43311711-43311730 None:intergenic 40.0%
AACTGCAGGAAAAAGAAGTG+TGG + chr1.3:43312453-43312472 MS.gene81765:CDS 40.0%
AGTAATCGTCTTCCCTGTTA+GGG - chr1.3:43311549-43311568 None:intergenic 40.0%
CTACATTGCATCTTGTGCTT+AGG + chr1.3:43311878-43311897 MS.gene81765:CDS 40.0%
GCCAAGATTCAAGACAAAGA+AGG + chr1.3:43311608-43311627 MS.gene81765:CDS 40.0%
CATACATCGTCTTGCAGTTG+AGG + chr1.3:43312579-43312598 MS.gene81765:intron 45.0%
CTAGCCAAAGCCATCAAAGA+AGG - chr1.3:43311925-43311944 None:intergenic 45.0%
CTCAACTGCAAGACGATGTA+TGG - chr1.3:43312581-43312600 None:intergenic 45.0%
GAAGTGTGGTCACAGTAATC+AGG + chr1.3:43312467-43312486 MS.gene81765:CDS 45.0%
GAGTAATCGTCTTCCCTGTT+AGG - chr1.3:43311550-43311569 None:intergenic 45.0%
GCTGGAAAACAGCTTGAAGA+TGG + chr1.3:43311732-43311751 MS.gene81765:CDS 45.0%
GTCATGTGACCTATGAAGCA+CGG - chr1.3:43312265-43312284 None:intergenic 45.0%
GTTGCAGAGGAACATACTTG+CGG - chr1.3:43311975-43311994 None:intergenic 45.0%
TCCGATGCATATCCAACACT+GGG + chr1.3:43312226-43312245 MS.gene81765:intron 45.0%
TGATTATCCAGGTATCCCAC+CGG + chr1.3:43311689-43311708 MS.gene81765:intron 45.0%
! TCCCAGTGTTGGATATGCAT+CGG - chr1.3:43312230-43312249 None:intergenic 45.0%
! TGAGCCTTCTTTGATGGCTT+TGG + chr1.3:43311918-43311937 MS.gene81765:CDS 45.0%
! TGTCGGTGTTTGTGCTTCAT+AGG - chr1.3:43312147-43312166 None:intergenic 45.0%
!! CAGCAGCGTTTGATTTTTGC+TGG + chr1.3:43311714-43311733 MS.gene81765:CDS 45.0%
!! CTTCTTTGATGGCTTTGGCT+AGG + chr1.3:43311923-43311942 MS.gene81765:CDS 45.0%
!! CTTGGCTTTGACATTGTCGA+TGG - chr1.3:43311594-43311613 None:intergenic 45.0%
!!! AAATTTTAATTTTGATTTAT+TGG + chr1.3:43311835-43311854 MS.gene81765:intron 5.0%
ACCTAGTGTCCGTGCTTCAT+AGG + chr1.3:43312253-43312272 MS.gene81765:intron 50.0%
ACCTATGAAGCACGGACACT+AGG - chr1.3:43312257-43312276 None:intergenic 50.0%
AGGAACATACTTGCGGCAGA+TGG - chr1.3:43311968-43311987 None:intergenic 50.0%
CATCTTGTGCTTAGGCTTCG+TGG + chr1.3:43311886-43311905 MS.gene81765:CDS 50.0%
CTATGCTCGTCTGCATCCAA+GGG + chr1.3:43312425-43312444 MS.gene81765:CDS 50.0%
CTCCGATGCATATCCAACAC+TGG + chr1.3:43312225-43312244 MS.gene81765:intron 50.0%
ATCAAACGCTGCTGATCCGG+TGG - chr1.3:43311708-43311727 None:intergenic 55.0%
ATCCAAGGGCTGTGAACTGC+AGG + chr1.3:43312439-43312458 MS.gene81765:CDS 55.0%
CACTAGGTGTCTCCCAGTGT+TGG - chr1.3:43312241-43312260 None:intergenic 55.0%
CTTGTGCTTAGGCTTCGTGG+TGG + chr1.3:43311889-43311908 MS.gene81765:CDS 55.0%
GCTATGCTCGTCTGCATCCA+AGG + chr1.3:43312424-43312443 MS.gene81765:CDS 55.0%
TCAAACGCTGCTGATCCGGT+GGG - chr1.3:43311707-43311726 None:intergenic 55.0%
TTCCTGCAGTTCACAGCCCT+TGG - chr1.3:43312444-43312463 None:intergenic 55.0%
TGCTGATCCGGTGGGATACC+TGG - chr1.3:43311699-43311718 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 43311527 43312622 43311527 ID=MS.gene81765
chr1.3 mRNA 43311527 43312622 43311527 ID=MS.gene81765.t1;Parent=MS.gene81765
chr1.3 exon 43311527 43311629 43311527 ID=MS.gene81765.t1.exon1;Parent=MS.gene81765.t1
chr1.3 CDS 43311527 43311629 43311527 ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1
chr1.3 exon 43311700 43311786 43311700 ID=MS.gene81765.t1.exon2;Parent=MS.gene81765.t1
chr1.3 CDS 43311700 43311786 43311700 ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1
chr1.3 exon 43311875 43311977 43311875 ID=MS.gene81765.t1.exon3;Parent=MS.gene81765.t1
chr1.3 CDS 43311875 43311977 43311875 ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1
chr1.3 exon 43312422 43312488 43312422 ID=MS.gene81765.t1.exon4;Parent=MS.gene81765.t1
chr1.3 CDS 43312422 43312488 43312422 ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1
chr1.3 exon 43312596 43312622 43312596 ID=MS.gene81765.t1.exon5;Parent=MS.gene81765.t1
chr1.3 CDS 43312596 43312622 43312596 ID=cds.MS.gene81765.t1;Parent=MS.gene81765.t1
Gene Sequence

>MS.gene81765

ATGCAGATTTTCGTGAAAACCCTAACAGGGAAGACGATTACTCTCGAAGTCGAGAGTAGCGATACCATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGTTAAAATTCTATTAATTCAATTTATTATTTACGAATTTTCATCAATTTCTGACATTTTTGATTATCCAGGTATCCCACCGGATCAGCAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTAGCTGATTACAATATTCAAAAGGGTATTTCTTTCATTTACCTCATCATTTTGCATTTTTTATTCAATTTTAAAATTTTAATTTTGATTTATTGGATAAATTGATTTTGTAGAGTCTACATTGCATCTTGTGCTTAGGCTTCGTGGTGGTATTATTGAGCCTTCTTTGATGGCTTTGGCTAGGAAATACAATCAAGACAAAACCATCTGCCGCAAGTATGTTCCTCTGCAACCTTCACCTTTTTTATTTTTTGCTTAATTTTAGGTTATGGTTTATTTAAATCACTCAAATACGATTAATTTTTAGGATTCAGAGCATATGCACTTCAATTTAAGCTAGTTTTACTATGATTTTCAATGAAAATTCACTAGTTTGTCACATCCTATGAAGCACAAACACCGACACAGATAATAATTTGGGAAAATGACGTAATTCAGTATAATCATATGTGTCGGTGTTGGACTCCGATGCATATCCAACACTGGGAGACACCTAGTGTCCGTGCTTCATAGGTCACATGACTACATTTTTACATTGGCATTTAAGATTAATGGTATAATATGTTGAAAGTTAGAGGGTTGTTATTGGACTTAAGTGTGAAACTATTTTACATTGGCATTTACCATTTTTTTTCTTTTCTTTCATTTTTGGTCTGTTAGATGCTATGCTCGTCTGCATCCAAGGGCTGTGAACTGCAGGAAAAAGAAGTGTGGTCACAGTAATCAGGTGTGACTAATTTCCACTCTATATTTTTAGTTTTTTAGCGTGTGAATTGTTGTGTAAAACGATGCAGTACTGAAATGTAATGTTGTTTACCATACATCGTCTTGCAGTTGAGGCCAAAGAAGAAGATTAAGTAG

Protein sequence

>MS.gene81765.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK