Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24706.t1 | EYU19679.1 | 100 | 128 | 0 | 0 | 1 | 128 | 44 | 171 | 3.20E-64 | 254.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24706.t1 | P49636 | 98.4 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 8.5e-66 | 250.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24706.t1 | A0A251UKK8 | 100.0 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 2.3e-64 | 254.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene24706 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene050281 | MS.gene24706 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene050290 | MS.gene24706 | 0.998908 | 2.16E-281 | -1.69E-46 |
| MS.gene050916 | MS.gene24706 | 0.842273 | 2.86E-58 | -1.69E-46 |
| MS.gene051330 | MS.gene24706 | 0.827185 | 1.80E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene24706 | 0.820562 | 6.42E-53 | -1.69E-46 |
| MS.gene051904 | MS.gene24706 | 0.8467 | 1.84E-59 | -1.69E-46 |
| MS.gene054937 | MS.gene24706 | 0.920232 | 1.66E-87 | -1.69E-46 |
| MS.gene056601 | MS.gene24706 | 0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene24706 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene056917 | MS.gene24706 | 0.862974 | 3.47E-64 | -1.69E-46 |
| MS.gene057092 | MS.gene24706 | 0.818012 | 2.45E-52 | -1.69E-46 |
| MS.gene057094 | MS.gene24706 | 0.803714 | 3.06E-49 | -1.69E-46 |
| MS.gene057206 | MS.gene24706 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene24706 | 0.839764 | 1.30E-57 | -1.69E-46 |
| MS.gene060856 | MS.gene24706 | 0.87967 | 1.03E-69 | -1.69E-46 |
| MS.gene061145 | MS.gene24706 | 0.837777 | 4.25E-57 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24706.t1 | MTR_7g105080 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
| MS.gene24706.t1 | MTR_3g092130 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
| MS.gene24706.t1 | MTR_1g059690 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.29e-92 | 263 |
| MS.gene24706.t1 | MTR_3g092130 | 98.361 | 122 | 2 | 0 | 1 | 122 | 1 | 122 | 2.83e-87 | 250 |
| MS.gene24706.t1 | MTR_5g092700 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
| MS.gene24706.t1 | MTR_5g092700 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
| MS.gene24706.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.38e-50 | 155 |
| MS.gene24706.t1 | MTR_4g073580 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.84e-26 | 96.7 |
| MS.gene24706.t1 | MTR_8g088060 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.45e-49 | 155 |
| MS.gene24706.t1 | MTR_5g033960 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.55e-49 | 155 |
| MS.gene24706.t1 | MTR_4g073580 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 3.56e-49 | 155 |
| MS.gene24706.t1 | MTR_4g073580 | 44.231 | 104 | 28 | 1 | 3 | 76 | 79 | 182 | 6.31e-20 | 80.9 |
| MS.gene24706.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.21e-49 | 156 |
| MS.gene24706.t1 | MTR_4g088485 | 98.701 | 77 | 1 | 0 | 1 | 77 | 138 | 214 | 5.53e-49 | 155 |
| MS.gene24706.t1 | MTR_4g088485 | 79.221 | 77 | 1 | 1 | 1 | 77 | 77 | 138 | 3.49e-34 | 118 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.74e-49 | 156 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.74e-49 | 156 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.35e-49 | 156 |
| MS.gene24706.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.54e-49 | 156 |
| MS.gene24706.t1 | MTR_1g066390 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.54e-49 | 156 |
| MS.gene24706.t1 | MTR_1g066390 | 100.000 | 76 | 0 | 0 | 1 | 76 | 153 | 228 | 8.47e-49 | 156 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.27e-48 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.27e-48 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.27e-48 | 157 |
| MS.gene24706.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.39e-48 | 155 |
| MS.gene24706.t1 | MTR_4g080920 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 2.56e-48 | 154 |
| MS.gene24706.t1 | MTR_4g080920 | 69.737 | 76 | 23 | 0 | 1 | 76 | 153 | 228 | 5.76e-30 | 107 |
| MS.gene24706.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.73e-48 | 156 |
| MS.gene24706.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.73e-48 | 156 |
| MS.gene24706.t1 | MTR_6g061930 | 98.701 | 77 | 1 | 0 | 1 | 77 | 214 | 290 | 3.61e-48 | 156 |
| MS.gene24706.t1 | MTR_6g061930 | 76.623 | 77 | 3 | 1 | 1 | 77 | 153 | 214 | 1.26e-31 | 113 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 49 | 125 | 3.06e-48 | 156 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 125 | 201 | 3.06e-48 | 156 |
| MS.gene24706.t1 | MTR_7g116360 | 98.701 | 77 | 1 | 0 | 1 | 77 | 201 | 277 | 3.97e-48 | 155 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.19e-48 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.19e-48 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.19e-48 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 4.81e-48 | 156 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.89e-48 | 155 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.89e-48 | 155 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 4.89e-48 | 155 |
| MS.gene24706.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.76e-47 | 157 |
| MS.gene24706.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.76e-47 | 157 |
| MS.gene24706.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.76e-47 | 157 |
| MS.gene24706.t1 | MTR_8g081020 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.76e-47 | 157 |
| MS.gene24706.t1 | MTR_8g081020 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.65e-47 | 156 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.78e-47 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.78e-47 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.78e-47 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.78e-47 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.68e-47 | 156 |
| MS.gene24706.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g080797 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
| MS.gene24706.t1 | MTR_4g091580 | 97.403 | 77 | 2 | 0 | 1 | 77 | 229 | 305 | 5.42e-47 | 155 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.82e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.46e-47 | 156 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.63e-47 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.03e-46 | 156 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.44e-46 | 157 |
| MS.gene24706.t1 | MTR_4g081010 | 100.000 | 76 | 0 | 0 | 1 | 76 | 457 | 532 | 3.63e-46 | 156 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.52e-46 | 157 |
| MS.gene24706.t1 | MTR_8g018230 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.37e-46 | 156 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.65e-46 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.65e-46 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.65e-46 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.65e-46 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.65e-46 | 157 |
| MS.gene24706.t1 | MTR_4g091580 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 3.55e-46 | 156 |
| MS.gene24706.t1 | MTR_4g091580 | 96.104 | 77 | 3 | 0 | 1 | 77 | 305 | 381 | 1.00e-44 | 152 |
| MS.gene24706.t1 | MTR_8g479250 | 96.104 | 77 | 3 | 0 | 1 | 77 | 141 | 217 | 1.09e-45 | 150 |
| MS.gene24706.t1 | MTR_8g479250 | 76.389 | 72 | 6 | 1 | 1 | 72 | 217 | 277 | 6.83e-27 | 101 |
| MS.gene24706.t1 | MTR_8g479250 | 100.000 | 41 | 0 | 0 | 1 | 41 | 1 | 41 | 1.21e-20 | 85.1 |
| MS.gene24706.t1 | MTR_8g479250 | 91.429 | 35 | 3 | 0 | 43 | 77 | 107 | 141 | 1.11e-14 | 68.9 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 457 | 533 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 533 | 609 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 609 | 685 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 685 | 761 | 2.16e-45 | 157 |
| MS.gene24706.t1 | MTR_4g088495 | 98.701 | 77 | 1 | 0 | 1 | 77 | 761 | 837 | 2.88e-45 | 156 |
| MS.gene24706.t1 | MTR_4g088495 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 4.96e-44 | 153 |
| MS.gene24706.t1 | MTR_1g046640 | 71.053 | 76 | 22 | 0 | 1 | 76 | 240 | 315 | 3.01e-28 | 105 |
| MS.gene24706.t1 | MTR_5g076810 | 68.831 | 77 | 23 | 1 | 1 | 76 | 194 | 270 | 1.09e-27 | 103 |
| MS.gene24706.t1 | MTR_5g076660 | 69.863 | 73 | 22 | 0 | 1 | 73 | 266 | 338 | 8.62e-27 | 102 |
| MS.gene24706.t1 | MTR_5g067400 | 68.421 | 76 | 24 | 0 | 1 | 76 | 241 | 316 | 1.74e-25 | 98.2 |
| MS.gene24706.t1 | MTR_5g061310 | 60.000 | 75 | 30 | 0 | 1 | 75 | 2 | 76 | 4.97e-25 | 90.9 |
| MS.gene24706.t1 | MTR_5g076370 | 64.384 | 73 | 26 | 0 | 1 | 73 | 267 | 339 | 3.83e-23 | 92.4 |
| MS.gene24706.t1 | MTR_2g038430 | 61.333 | 75 | 29 | 0 | 1 | 75 | 268 | 342 | 5.57e-23 | 92.0 |
| MS.gene24706.t1 | MTR_5g076505 | 61.333 | 75 | 29 | 0 | 1 | 75 | 240 | 314 | 8.04e-23 | 90.9 |
| MS.gene24706.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 171 | 246 | 3.44e-22 | 88.2 |
| MS.gene24706.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 4.89e-22 | 89.0 |
| MS.gene24706.t1 | MTR_5g076720 | 65.333 | 75 | 26 | 0 | 1 | 75 | 315 | 389 | 6.25e-22 | 89.4 |
| MS.gene24706.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 6.95e-22 | 88.6 |
| MS.gene24706.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 271 | 346 | 9.51e-22 | 88.6 |
| MS.gene24706.t1 | MTR_5g076740 | 59.211 | 76 | 30 | 1 | 1 | 75 | 86 | 161 | 1.13e-21 | 84.7 |
| MS.gene24706.t1 | MTR_2g038420 | 60.000 | 75 | 30 | 0 | 1 | 75 | 260 | 334 | 1.35e-21 | 88.2 |
| MS.gene24706.t1 | MTR_7g094390 | 58.667 | 75 | 31 | 0 | 1 | 75 | 402 | 476 | 8.93e-21 | 86.7 |
| MS.gene24706.t1 | MTR_5g076520 | 57.333 | 75 | 31 | 1 | 1 | 74 | 244 | 318 | 3.43e-19 | 81.3 |
| MS.gene24706.t1 | MTR_7g024290 | 60.526 | 76 | 29 | 1 | 1 | 75 | 241 | 316 | 8.99e-19 | 80.1 |
| MS.gene24706.t1 | MTR_4g009980 | 55.224 | 67 | 30 | 0 | 9 | 75 | 4 | 70 | 5.06e-18 | 72.8 |
| MS.gene24706.t1 | MTR_5g061290 | 53.333 | 75 | 35 | 0 | 1 | 75 | 252 | 326 | 6.95e-18 | 77.8 |
| MS.gene24706.t1 | MTR_5g079360 | 70.213 | 47 | 14 | 0 | 50 | 96 | 9 | 55 | 4.53e-17 | 70.1 |
| MS.gene24706.t1 | MTR_5g076350 | 48.684 | 76 | 38 | 1 | 1 | 75 | 8 | 83 | 1.16e-15 | 67.4 |
| MS.gene24706.t1 | MTR_5g076760 | 59.649 | 57 | 23 | 0 | 11 | 67 | 5 | 61 | 4.47e-15 | 65.9 |
| MS.gene24706.t1 | MTR_5g076780 | 58.333 | 60 | 25 | 0 | 15 | 74 | 4 | 63 | 5.66e-15 | 65.1 |
| MS.gene24706.t1 | MTR_5g076340 | 50.649 | 77 | 36 | 2 | 1 | 75 | 9 | 85 | 1.24e-14 | 64.7 |
| MS.gene24706.t1 | MTR_4g080783 | 76.471 | 34 | 8 | 0 | 44 | 77 | 7 | 40 | 6.78e-12 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24706.t1 | AT3G52590 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
| MS.gene24706.t1 | AT2G36170 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.78e-91 | 259 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.57e-50 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.32e-50 | 156 |
| MS.gene24706.t1 | AT2G35635 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 9.81e-50 | 155 |
| MS.gene24706.t1 | AT2G35635 | 60.526 | 76 | 30 | 0 | 3 | 78 | 79 | 154 | 2.00e-26 | 96.7 |
| MS.gene24706.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
| MS.gene24706.t1 | AT2G47110 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.48e-49 | 155 |
| MS.gene24706.t1 | AT1G31340 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.51e-49 | 155 |
| MS.gene24706.t1 | AT1G31340 | 62.667 | 75 | 28 | 0 | 3 | 77 | 79 | 153 | 5.16e-27 | 98.6 |
| MS.gene24706.t1 | AT3G62250 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.70e-49 | 155 |
| MS.gene24706.t1 | AT1G23410 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.71e-49 | 155 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G05050 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.96e-49 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.65e-49 | 156 |
| MS.gene24706.t1 | AT1G55060 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.90e-48 | 155 |
| MS.gene24706.t1 | AT1G55060 | 97.368 | 76 | 2 | 0 | 1 | 76 | 153 | 228 | 2.46e-46 | 149 |
| MS.gene24706.t1 | AT1G55060 | 85.714 | 77 | 11 | 0 | 1 | 77 | 1 | 77 | 2.30e-42 | 139 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.34e-48 | 157 |
| MS.gene24706.t1 | AT4G02890 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.47e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G03240 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.50e-48 | 156 |
| MS.gene24706.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.28e-48 | 156 |
| MS.gene24706.t1 | AT1G65350 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 6.13e-48 | 156 |
| MS.gene24706.t1 | AT1G65350 | 97.403 | 77 | 2 | 0 | 1 | 77 | 152 | 228 | 9.26e-47 | 153 |
| MS.gene24706.t1 | AT1G65350 | 97.403 | 77 | 1 | 1 | 1 | 77 | 77 | 152 | 6.86e-45 | 148 |
| MS.gene24706.t1 | AT1G65350 | 80.000 | 90 | 4 | 1 | 1 | 76 | 228 | 317 | 6.05e-39 | 133 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.91e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.57e-47 | 156 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.97e-47 | 157 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.97e-47 | 157 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.97e-47 | 157 |
| MS.gene24706.t1 | AT5G20620 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.97e-47 | 157 |
| MS.gene24706.t1 | AT5G20620 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 2.96e-47 | 156 |
| MS.gene24706.t1 | AT5G37640 | 96.104 | 77 | 3 | 0 | 1 | 77 | 79 | 155 | 4.64e-47 | 154 |
| MS.gene24706.t1 | AT5G37640 | 92.208 | 77 | 6 | 0 | 1 | 77 | 155 | 231 | 6.93e-43 | 143 |
| MS.gene24706.t1 | AT5G37640 | 92.208 | 77 | 5 | 1 | 1 | 76 | 231 | 307 | 8.36e-41 | 138 |
| MS.gene24706.t1 | AT5G37640 | 77.922 | 77 | 17 | 0 | 1 | 77 | 3 | 79 | 5.00e-34 | 120 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 7.99e-47 | 157 |
| MS.gene24706.t1 | AT4G05320 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.07e-46 | 156 |
| MS.gene24706.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
| MS.gene24706.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
| MS.gene24706.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
| MS.gene24706.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
| MS.gene24706.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
| MS.gene24706.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
| MS.gene24706.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
| MS.gene24706.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
| MS.gene24706.t1 | AT3G09790 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.39e-40 | 141 |
| MS.gene24706.t1 | AT3G09790 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.13e-37 | 132 |
| MS.gene24706.t1 | AT3G09790 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.20e-31 | 117 |
| MS.gene24706.t1 | AT3G09790 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.33e-28 | 109 |
| MS.gene24706.t1 | AT3G09790 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.27e-27 | 105 |
| MS.gene24706.t1 | AT3G09790 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.28e-27 | 104 |
| MS.gene24706.t1 | AT3G09790 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.63e-26 | 102 |
| MS.gene24706.t1 | AT3G09790 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.57e-25 | 100 |
| MS.gene24706.t1 | AT1G53930 | 75.342 | 73 | 18 | 0 | 1 | 73 | 86 | 158 | 6.40e-33 | 113 |
| MS.gene24706.t1 | AT1G53950 | 61.972 | 71 | 27 | 0 | 1 | 71 | 69 | 139 | 2.72e-25 | 93.6 |
| MS.gene24706.t1 | AT1G11980 | 55.263 | 76 | 34 | 0 | 1 | 76 | 1 | 76 | 2.81e-24 | 89.0 |
| MS.gene24706.t1 | AT1G53945 | 46.269 | 67 | 36 | 0 | 1 | 67 | 46 | 112 | 7.40e-13 | 61.2 |
| MS.gene24706.t1 | AT4G12570 | 38.667 | 75 | 45 | 1 | 1 | 74 | 95 | 169 | 4.20e-12 | 62.4 |
| MS.gene24706.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
| MS.gene24706.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.07e-12 | 61.6 |
Find 31 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAGAGTCGACTCCTTC+TGG | 0.282090 | 7.3:-9547710 | None:intergenic |
| TGAACCTTCTTTGATGGCTT+TGG | 0.289629 | 7.3:+9547761 | MS.gene24706:CDS |
| GTTTACTTGATCTTCTTCTT+TGG | 0.291019 | 7.3:-9548695 | None:intergenic |
| TATCATTGAACCTTCTTTGA+TGG | 0.309911 | 7.3:+9547755 | MS.gene24706:CDS |
| CGACTCTTCATCTTGTTCTC+AGG | 0.368663 | 7.3:+9547721 | MS.gene24706:CDS |
| CTTGCGGCAATTCACAGCCC+TGG | 0.385112 | 7.3:-9548546 | None:intergenic |
| ATCTTCGTGAAAACCCTAAC+CGG | 0.392499 | 7.3:+9547429 | MS.gene24706:CDS |
| CGAAACGTACTTGCGGCAAA+TGG | 0.413865 | 7.3:-9547808 | None:intergenic |
| CATCTTGTTCTCAGGCTTCG+TGG | 0.432449 | 7.3:+9547729 | MS.gene24706:CDS |
| CTTGCCAAAGCCATCAAAGA+AGG | 0.438792 | 7.3:-9547765 | None:intergenic |
| AAAATCAATCGCTGCTGATC+CGG | 0.469570 | 7.3:-9547639 | None:intergenic |
| GCTGGTAAGCAGCTTGAAGA+TGG | 0.474946 | 7.3:+9547663 | MS.gene24706:CDS |
| TTGCGGCAATTCACAGCCCT+GGG | 0.484020 | 7.3:-9548545 | None:intergenic |
| GTTATGCTCGTCTTCATCCC+AGG | 0.488696 | 7.3:+9548528 | MS.gene24706:CDS |
| GAAGGCAAAGATTCAAGATA+AGG | 0.516683 | 7.3:+9547500 | MS.gene24706:CDS |
| CTTCTTTGATGGCTTTGGCA+AGG | 0.516867 | 7.3:+9547766 | MS.gene24706:CDS |
| GCTCTCGACCTCGAGGGTGA+TGG | 0.521344 | 7.3:-9547457 | None:intergenic |
| CTGGATATTGTAATCAGCTA+AGG | 0.527740 | 7.3:-9547691 | None:intergenic |
| ATCAATCGCTGCTGATCCGG+TGG | 0.556661 | 7.3:-9547636 | None:intergenic |
| TATGACCACACTTCTTCTTG+CGG | 0.587437 | 7.3:-9548562 | None:intergenic |
| TTATGCTCGTCTTCATCCCA+GGG | 0.594695 | 7.3:+9548529 | MS.gene24706:CDS |
| TGTCACTGCTCTCGACCTCG+AGG | 0.600978 | 7.3:-9547464 | None:intergenic |
| GAAATAATCAGGTATTCCAC+CGG | 0.607938 | 7.3:+9547620 | MS.gene24706:intron |
| GCAAAGATTCAAGATAAGGA+AGG | 0.611123 | 7.3:+9547504 | MS.gene24706:CDS |
| GTCACTGCTCTCGACCTCGA+GGG | 0.618266 | 7.3:-9547463 | None:intergenic |
| TCTTCGTGAAAACCCTAACC+GGG | 0.632822 | 7.3:+9547430 | MS.gene24706:CDS |
| AGCTGATTACAATATCCAGA+AGG | 0.645289 | 7.3:+9547695 | MS.gene24706:CDS |
| TGACACAATCGACAATGTGA+AGG | 0.654541 | 7.3:+9547482 | MS.gene24706:CDS |
| CTTGTTCTCAGGCTTCGTGG+TGG | 0.665175 | 7.3:+9547732 | MS.gene24706:CDS |
| CGGGAAAACCATCACCCTCG+AGG | 0.716475 | 7.3:+9547449 | MS.gene24706:CDS |
| AATTGCCGCAAGAAGAAGTG+TGG | 0.732026 | 7.3:+9548557 | MS.gene24706:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAATAAAAGTGTAT+TGG | - | chr7.3:9548099-9548118 | None:intergenic | 10.0% |
| !!! | TTTTTATTCAATTTCATAGT+TGG | + | chr7.3:9548437-9548456 | MS.gene24706:intron | 15.0% |
| !! | AAAAATCATTCAATTCAAAC+AGG | - | chr7.3:9548050-9548069 | None:intergenic | 20.0% |
| !! | TGATTGTGATATTAATGAAT+TGG | + | chr7.3:9547870-9547889 | MS.gene24706:intron | 20.0% |
| !!! | TGCATAAGCTTTTTTTTTTA+AGG | - | chr7.3:9548130-9548149 | None:intergenic | 20.0% |
| ! | AACTGCAGTCAAAAAAAAAA+AGG | - | chr7.3:9548671-9548690 | None:intergenic | 25.0% |
| ! | AGTAAGAAATGGATCATTAT+AGG | - | chr7.3:9548356-9548375 | None:intergenic | 25.0% |
| ! | GTAAGAAATGGATCATTATA+GGG | - | chr7.3:9548355-9548374 | None:intergenic | 25.0% |
| ! | GTTATGTATAAGCTCAAAAA+GGG | - | chr7.3:9547951-9547970 | None:intergenic | 25.0% |
| ! | TGTTATGTATAAGCTCAAAA+AGG | - | chr7.3:9547952-9547971 | None:intergenic | 25.0% |
| ! | TTATGCAATATATCCCATTT+AGG | + | chr7.3:9548023-9548042 | MS.gene24706:intron | 25.0% |
| ! | TTATTCAATTTCATAGTTGG+TGG | + | chr7.3:9548440-9548459 | MS.gene24706:intron | 25.0% |
| ! | TTTGATCTAAGTGTGAATTT+GGG | + | chr7.3:9548489-9548508 | MS.gene24706:intron | 25.0% |
| ! | TTTGTATAGCTGATATTGAT+GGG | + | chr7.3:9548275-9548294 | MS.gene24706:intron | 25.0% |
| !! | GTAATTTTGTGCTATGTTTT+TGG | + | chr7.3:9548617-9548636 | MS.gene24706:intron | 25.0% |
| !! | TGTTGTTTAAAAGTGCAATT+GGG | + | chr7.3:9548317-9548336 | MS.gene24706:intron | 25.0% |
| !! | TTTTGATCTAAGTGTGAATT+TGG | + | chr7.3:9548488-9548507 | MS.gene24706:intron | 25.0% |
| !!! | ATTGAATGATTTTTGAGCTT+AGG | + | chr7.3:9548056-9548075 | MS.gene24706:intron | 25.0% |
| !!! | TTGTTGTTTAAAAGTGCAAT+TGG | + | chr7.3:9548316-9548335 | MS.gene24706:intron | 25.0% |
| AACCAGGACTAATTACATTA+AGG | - | chr7.3:9548248-9548267 | None:intergenic | 30.0% | |
| AACTGGAAAATATTAAACCC+AGG | - | chr7.3:9548385-9548404 | None:intergenic | 30.0% | |
| AATTCAAACAGGACCTAAAT+GGG | - | chr7.3:9548039-9548058 | None:intergenic | 30.0% | |
| ACCAGGACTAATTACATTAA+GGG | - | chr7.3:9548247-9548266 | None:intergenic | 30.0% | |
| CATTTCTTACTTTATCACCT+GGG | + | chr7.3:9548365-9548384 | MS.gene24706:intron | 30.0% | |
| GTTTGTATAGCTGATATTGA+TGG | + | chr7.3:9548274-9548293 | MS.gene24706:intron | 30.0% | |
| TAATTCATAAGTTCTCGCTA+AGG | - | chr7.3:9548158-9548177 | None:intergenic | 30.0% | |
| TATCATTGAACCTTCTTTGA+TGG | + | chr7.3:9547755-9547774 | MS.gene24706:CDS | 30.0% | |
| TTGATCTAAGTGTGAATTTG+GGG | + | chr7.3:9548490-9548509 | MS.gene24706:intron | 30.0% | |
| ! | CGCTTTTGAATGAAATAATC+AGG | + | chr7.3:9547609-9547628 | MS.gene24706:intron | 30.0% |
| ! | GCACTTTTAAACAACAAAAG+AGG | - | chr7.3:9548313-9548332 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAAGTGCAATTG+GGG | + | chr7.3:9548318-9548337 | MS.gene24706:intron | 30.0% |
| !!! | AGCTTTTAAGTTAATCCAGA+CGG | + | chr7.3:9548221-9548240 | MS.gene24706:intron | 30.0% |
| !!! | TTTCTCGATTTGGTACATTT+TGG | + | chr7.3:9548408-9548427 | MS.gene24706:intron | 30.0% |
| !!! | TTTTTTTTTGACTGCAGTTG+AGG | + | chr7.3:9548672-9548691 | MS.gene24706:intron | 30.0% |
| ACAAAACAAACATCAGCACA+AGG | - | chr7.3:9548646-9548665 | None:intergenic | 35.0% | |
| ACCAAATCGAGAAAATCAAC+TGG | - | chr7.3:9548402-9548421 | None:intergenic | 35.0% | |
| AGCTGATTACAATATCCAGA+AGG | + | chr7.3:9547695-9547714 | MS.gene24706:CDS | 35.0% | |
| ATGGCTACATGAATCAAACA+AGG | - | chr7.3:9547928-9547947 | None:intergenic | 35.0% | |
| CAATTCAAACAGGACCTAAA+TGG | - | chr7.3:9548040-9548059 | None:intergenic | 35.0% | |
| CCAGGTGATAAAGTAAGAAA+TGG | - | chr7.3:9548367-9548386 | None:intergenic | 35.0% | |
| CCATTTCTTACTTTATCACC+TGG | + | chr7.3:9548364-9548383 | MS.gene24706:intron | 35.0% | |
| CTGGATATTGTAATCAGCTA+AGG | - | chr7.3:9547694-9547713 | None:intergenic | 35.0% | |
| GAAATAATCAGGTATTCCAC+CGG | + | chr7.3:9547620-9547639 | MS.gene24706:intron | 35.0% | |
| GAAGGCAAAGATTCAAGATA+AGG | + | chr7.3:9547500-9547519 | MS.gene24706:CDS | 35.0% | |
| GCAAAGATTCAAGATAAGGA+AGG | + | chr7.3:9547504-9547523 | MS.gene24706:CDS | 35.0% | |
| TGTATAAGCTCAAAAAGGGA+TGG | - | chr7.3:9547947-9547966 | None:intergenic | 35.0% | |
| ! | ATTTCATTCAAAAGCGCGTT+TGG | - | chr7.3:9547605-9547624 | None:intergenic | 35.0% |
| !! | TCCAGTTGATTTTCTCGATT+TGG | + | chr7.3:9548398-9548417 | MS.gene24706:intron | 35.0% |
| !!! | TTGTGCTGATGTTTGTTTTG+TGG | + | chr7.3:9548645-9548664 | MS.gene24706:intron | 35.0% |
| AAAATCAATCGCTGCTGATC+CGG | - | chr7.3:9547642-9547661 | None:intergenic | 40.0% | |
| ATCTTCGTGAAAACCCTAAC+CGG | + | chr7.3:9547429-9547448 | MS.gene24706:CDS | 40.0% | |
| GAAATGACGAAACGTACTTG+CGG | - | chr7.3:9547818-9547837 | None:intergenic | 40.0% | |
| GCCCTTAATGTAATTAGTCC+TGG | + | chr7.3:9548243-9548262 | MS.gene24706:intron | 40.0% | |
| TAATTACATTAAGGGCCGTC+TGG | - | chr7.3:9548239-9548258 | None:intergenic | 40.0% | |
| TATGACCACACTTCTTCTTG+CGG | - | chr7.3:9548565-9548584 | None:intergenic | 40.0% | |
| TGACACAATCGACAATGTGA+AGG | + | chr7.3:9547482-9547501 | MS.gene24706:CDS | 40.0% | |
| ! | TGAACCTTCTTTGATGGCTT+TGG | + | chr7.3:9547761-9547780 | MS.gene24706:CDS | 40.0% |
| AATTGCCGCAAGAAGAAGTG+TGG | + | chr7.3:9548557-9548576 | MS.gene24706:CDS | 45.0% | |
| CGACTCTTCATCTTGTTCTC+AGG | + | chr7.3:9547721-9547740 | MS.gene24706:CDS | 45.0% | |
| CTATACAAACAGCAGCAACC+AGG | - | chr7.3:9548264-9548283 | None:intergenic | 45.0% | |
| CTTGCCAAAGCCATCAAAGA+AGG | - | chr7.3:9547768-9547787 | None:intergenic | 45.0% | |
| TCTTCGTGAAAACCCTAACC+GGG | + | chr7.3:9547430-9547449 | MS.gene24706:CDS | 45.0% | |
| TTATGCTCGTCTTCATCCCA+GGG | + | chr7.3:9548529-9548548 | MS.gene24706:CDS | 45.0% | |
| !! | CTTCTTTGATGGCTTTGGCA+AGG | + | chr7.3:9547766-9547785 | MS.gene24706:CDS | 45.0% |
| !!! | TGCGGCAAATGGTTTTGTCT+TGG | - | chr7.3:9547800-9547819 | None:intergenic | 45.0% |
| CATCTTGTTCTCAGGCTTCG+TGG | + | chr7.3:9547729-9547748 | MS.gene24706:CDS | 50.0% | |
| CGAAACGTACTTGCGGCAAA+TGG | - | chr7.3:9547811-9547830 | None:intergenic | 50.0% | |
| GCTGGTAAGCAGCTTGAAGA+TGG | + | chr7.3:9547663-9547682 | MS.gene24706:CDS | 50.0% | |
| GTTATGCTCGTCTTCATCCC+AGG | + | chr7.3:9548528-9548547 | MS.gene24706:CDS | 50.0% | |
| ! | GATGAAGAGTCGACTCCTTC+TGG | - | chr7.3:9547713-9547732 | None:intergenic | 50.0% |
| !! | CAGCAGCGATTGATTTTCGC+TGG | + | chr7.3:9547645-9547664 | MS.gene24706:CDS | 50.0% |
| !! | GGTGATGGTTTTCCCGGTTA+GGG | - | chr7.3:9547445-9547464 | None:intergenic | 50.0% |
| ATCAATCGCTGCTGATCCGG+TGG | - | chr7.3:9547639-9547658 | None:intergenic | 55.0% | |
| CTTGTTCTCAGGCTTCGTGG+TGG | + | chr7.3:9547732-9547751 | MS.gene24706:CDS | 55.0% | |
| TTGCGGCAATTCACAGCCCT+GGG | - | chr7.3:9548548-9548567 | None:intergenic | 55.0% | |
| !! | CTCGAGGGTGATGGTTTTCC+CGG | - | chr7.3:9547451-9547470 | None:intergenic | 55.0% |
| !! | GGGTGATGGTTTTCCCGGTT+AGG | - | chr7.3:9547446-9547465 | None:intergenic | 55.0% |
| CGGGAAAACCATCACCCTCG+AGG | + | chr7.3:9547449-9547468 | MS.gene24706:CDS | 60.0% | |
| CTTGCGGCAATTCACAGCCC+TGG | - | chr7.3:9548549-9548568 | None:intergenic | 60.0% | |
| GTCACTGCTCTCGACCTCGA+GGG | - | chr7.3:9547466-9547485 | None:intergenic | 60.0% | |
| TGTCACTGCTCTCGACCTCG+AGG | - | chr7.3:9547467-9547486 | None:intergenic | 60.0% | |
| GCTCTCGACCTCGAGGGTGA+TGG | - | chr7.3:9547460-9547479 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9547423 | 9548715 | 9547423 | ID=MS.gene24706 |
| chr7.3 | mRNA | 9547423 | 9548715 | 9547423 | ID=MS.gene24706.t1;Parent=MS.gene24706 |
| chr7.3 | exon | 9547423 | 9547525 | 9547423 | ID=MS.gene24706.t1.exon1;Parent=MS.gene24706.t1 |
| chr7.3 | CDS | 9547423 | 9547525 | 9547423 | ID=cds.MS.gene24706.t1;Parent=MS.gene24706.t1 |
| chr7.3 | exon | 9547631 | 9547820 | 9547631 | ID=MS.gene24706.t1.exon2;Parent=MS.gene24706.t1 |
| chr7.3 | CDS | 9547631 | 9547820 | 9547631 | ID=cds.MS.gene24706.t1;Parent=MS.gene24706.t1 |
| chr7.3 | exon | 9548526 | 9548592 | 9548526 | ID=MS.gene24706.t1.exon3;Parent=MS.gene24706.t1 |
| chr7.3 | CDS | 9548526 | 9548592 | 9548526 | ID=cds.MS.gene24706.t1;Parent=MS.gene24706.t1 |
| chr7.3 | exon | 9548689 | 9548715 | 9548689 | ID=MS.gene24706.t1.exon4;Parent=MS.gene24706.t1 |
| chr7.3 | CDS | 9548689 | 9548715 | 9548689 | ID=cds.MS.gene24706.t1;Parent=MS.gene24706.t1 |
| Gene Sequence |
| Protein sequence |
