Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032118.t1 | XP_003596499.2 | 97.4 | 802 | 21 | 0 | 1 | 802 | 1 | 802 | 0.00E+00 | 1595.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032118.t1 | Q8L6Y1 | 74.8 | 804 | 193 | 4 | 1 | 802 | 1 | 796 | 0.0e+00 | 1256.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032118.t1 | G7IR70 | 97.4 | 802 | 21 | 0 | 1 | 802 | 1 | 802 | 0.0e+00 | 1595.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene24706 | MS.gene032118 | PPI |
MS.gene06859 | MS.gene032118 | PPI |
MS.gene81765 | MS.gene032118 | PPI |
MS.gene013534 | MS.gene032118 | PPI |
MS.gene06645 | MS.gene032118 | PPI |
MS.gene007189 | MS.gene032118 | PPI |
MS.gene057206 | MS.gene032118 | PPI |
MS.gene032118 | MS.gene034846 | PPI |
MS.gene032118 | MS.gene056896 | PPI |
MS.gene032118 | MS.gene050252 | PPI |
MS.gene050290 | MS.gene032118 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032118.t1 | MTR_2g081180 | 98.504 | 802 | 12 | 0 | 1 | 802 | 1 | 802 | 0.0 | 1650 |
MS.gene032118.t1 | MTR_2g081180 | 97.007 | 802 | 10 | 1 | 1 | 802 | 1 | 788 | 0.0 | 1617 |
MS.gene032118.t1 | MTR_2g081180 | 96.259 | 802 | 12 | 1 | 1 | 802 | 1 | 784 | 0.0 | 1603 |
MS.gene032118.t1 | MTR_2g081180 | 97.522 | 565 | 14 | 0 | 238 | 802 | 4 | 568 | 0.0 | 1150 |
MS.gene032118.t1 | MTR_2g081180 | 97.732 | 529 | 12 | 0 | 274 | 802 | 1 | 529 | 0.0 | 1081 |
MS.gene032118.t1 | MTR_8g464880 | 63.333 | 120 | 36 | 2 | 629 | 745 | 1 | 115 | 9.13e-42 | 149 |
MS.gene032118.t1 | MTR_4g077475 | 63.636 | 66 | 24 | 0 | 737 | 802 | 64 | 129 | 2.49e-23 | 96.7 |
MS.gene032118.t1 | MTR_4g077475 | 70.000 | 60 | 17 | 1 | 546 | 605 | 1 | 59 | 8.88e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032118.t1 | AT3G20630 | 75.373 | 804 | 188 | 4 | 1 | 802 | 1 | 796 | 0.0 | 1280 |
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCATTCAAAATTGGTATTT+TGG | 0.154188 | 2.2:-14889951 | None:intergenic |
AGAAAGCTCACCGCAGATTT+AGG | 0.157334 | 2.2:-14890820 | None:intergenic |
CCACTTCCTGCCCACTTTCT+TGG | 0.161699 | 2.2:-14889981 | None:intergenic |
TAGACGCGATTGGTGGGTTC+TGG | 0.186615 | 2.2:-14885315 | None:intergenic |
TGTTTCACAGCTGGTTTCTA+TGG | 0.210475 | 2.2:+14893516 | MS.gene032118:CDS |
TCTTTCTTTCAGTTGTTATT+TGG | 0.220648 | 2.2:+14890131 | MS.gene032118:intron |
GATTCTATTCCATTCAAAAT+TGG | 0.229016 | 2.2:-14889959 | None:intergenic |
GGCTGGTCTGACATCATTTC+CGG | 0.268886 | 2.2:+14892738 | MS.gene032118:CDS |
TTGAGAAATTTCAGAAGAAT+TGG | 0.277779 | 2.2:+14892024 | MS.gene032118:intron |
CAGCACGATCTTTCTCTTCA+AGG | 0.285617 | 2.2:+14890178 | MS.gene032118:CDS |
TTCCACAGGATATCGACTTA+TGG | 0.286341 | 2.2:+14894309 | MS.gene032118:intron |
GAAAGCTCACCGCAGATTTA+GGG | 0.309690 | 2.2:-14890819 | None:intergenic |
TTCTTCAAAGGCCTGTCTTC+CGG | 0.312227 | 2.2:-14885626 | None:intergenic |
TCCACAGGATATCGACTTAT+GGG | 0.329168 | 2.2:+14894310 | MS.gene032118:intron |
ATATCCTTCTGTGGAATTAC+CGG | 0.332484 | 2.2:+14886576 | MS.gene032118:CDS |
GTTGATATGCTACTTTCATT+TGG | 0.336414 | 2.2:+14893785 | MS.gene032118:CDS |
CATGTCCTTGGGAGGATTAA+TGG | 0.341823 | 2.2:-14894437 | None:intergenic |
GTGACAAGACAGACAATCTT+TGG | 0.355394 | 2.2:+14886893 | MS.gene032118:CDS |
GACATCATTTCCGGATTATC+TGG | 0.361596 | 2.2:+14892747 | MS.gene032118:CDS |
ACATCTTGAAAGATGGTAGA+TGG | 0.364517 | 2.2:+14894383 | MS.gene032118:CDS |
CTTTGAAAAGACTGGAAATC+CGG | 0.366390 | 2.2:+14885568 | MS.gene032118:CDS |
GGGAGCATTTCCACCCAGTT+GGG | 0.379352 | 2.2:-14886867 | None:intergenic |
GAAAAGTTGCATACAATAGA+AGG | 0.386707 | 2.2:+14891875 | MS.gene032118:CDS |
CGGAACTATTACTGCTGATC+TGG | 0.387196 | 2.2:+14887032 | MS.gene032118:CDS |
CAAATGCCTTCTTTAGACTT+TGG | 0.387309 | 2.2:-14890292 | None:intergenic |
CTTGCACATGGTTTACTGTC+TGG | 0.392484 | 2.2:+14890662 | MS.gene032118:CDS |
AAACCTACCCTGTTGGCTAT+AGG | 0.396001 | 2.2:+14885647 | MS.gene032118:CDS |
CCAAACTTGAAACTCCTTGC+GGG | 0.398914 | 2.2:-14891823 | None:intergenic |
TCAGATAAATCAGTATCATT+TGG | 0.401471 | 2.2:-14894058 | None:intergenic |
CCCGCAAGGAGTTTCAAGTT+TGG | 0.407324 | 2.2:+14891823 | MS.gene032118:CDS |
TGACTGATATCAATGATATC+AGG | 0.409150 | 2.2:-14892923 | None:intergenic |
GCACATGCGCAAATTTGTTA+TGG | 0.413937 | 2.2:+14892774 | MS.gene032118:CDS |
AACACAAACCTATAGCCAAC+AGG | 0.418816 | 2.2:-14885655 | None:intergenic |
GAAGACGAAGAAGCCGGTTC+CGG | 0.419600 | 2.2:+14885607 | MS.gene032118:CDS |
AGAGCCACGCCCTCTCGAAA+TGG | 0.421013 | 2.2:-14893741 | None:intergenic |
AGACGCGATTGGTGGGTTCT+GGG | 0.423164 | 2.2:-14885314 | None:intergenic |
GTAAAGATAGCCCATGTCCT+TGG | 0.425428 | 2.2:-14894449 | None:intergenic |
TGATTTCTCATCACTACAAA+AGG | 0.427517 | 2.2:+14889044 | MS.gene032118:CDS |
AAAGGCCTGTCTTCCGGAAC+CGG | 0.427653 | 2.2:-14885620 | None:intergenic |
TGGAATAGAATCCAAGAAAG+TGG | 0.428006 | 2.2:+14889970 | MS.gene032118:CDS |
ACTGATGGAGTGATCCTTTG+TGG | 0.429861 | 2.2:+14886925 | MS.gene032118:CDS |
TTCTTCACATGCAAATAAAC+CGG | 0.433166 | 2.2:-14885587 | None:intergenic |
TGCATTTGGGAAGGATTATG+TGG | 0.443375 | 2.2:+14885538 | MS.gene032118:CDS |
TGTTAGTTGCTTCATGCAAT+GGG | 0.443599 | 2.2:-14891924 | None:intergenic |
TGTCGCATAGTAGAAAATTC+CGG | 0.445319 | 2.2:-14891362 | None:intergenic |
GTTTCACAGCTGGTTTCTAT+GGG | 0.445621 | 2.2:+14893517 | MS.gene032118:CDS |
GATTGGTCAATCTAGGAAAC+AGG | 0.446646 | 2.2:+14890031 | MS.gene032118:CDS |
CGTAGCAAAGGTCATCAACC+TGG | 0.446947 | 2.2:+14892950 | MS.gene032118:CDS |
TATGCATCTGTAGGTATTGA+TGG | 0.447383 | 2.2:+14886478 | MS.gene032118:intron |
TTGTTAGTTGCTTCATGCAA+TGG | 0.453282 | 2.2:-14891925 | None:intergenic |
TTGCACATGGTTTACTGTCT+GGG | 0.459136 | 2.2:+14890663 | MS.gene032118:CDS |
GAGCCACGCCCTCTCGAAAT+GGG | 0.459446 | 2.2:-14893740 | None:intergenic |
CAAGTGGAGCGTGCTAATGC+TGG | 0.464682 | 2.2:+14891784 | MS.gene032118:CDS |
CTGTGAAACAATGTCTTCAT+TGG | 0.465041 | 2.2:-14893503 | None:intergenic |
CTTTGGTTAAATTTGACTGA+TGG | 0.465186 | 2.2:+14886910 | MS.gene032118:CDS |
ATTGTCTGTCTTGTCACATT+GGG | 0.467678 | 2.2:-14886887 | None:intergenic |
GATCGTATCTTGTGTTCATC+GGG | 0.468245 | 2.2:+14891853 | MS.gene032118:CDS |
TTGCTTGTAGACGCGATTGG+TGG | 0.470730 | 2.2:-14885322 | None:intergenic |
TAAAGATAGCCCATGTCCTT+GGG | 0.473415 | 2.2:-14894448 | None:intergenic |
ACTGCATCAAACACTACATC+TGG | 0.478137 | 2.2:+14894034 | MS.gene032118:CDS |
TGAAGACATTGTTTCACAGC+TGG | 0.478207 | 2.2:+14893507 | MS.gene032118:CDS |
CAAGCTTCTAAAGGCACCCT+TGG | 0.478820 | 2.2:-14892203 | None:intergenic |
CTAGCTCACATGGAGGATCC+AGG | 0.478997 | 2.2:+14893616 | MS.gene032118:CDS |
TGCTTGTAGACGCGATTGGT+GGG | 0.481175 | 2.2:-14885321 | None:intergenic |
AGGTCCACAGTTGGATCAGC+AGG | 0.481485 | 2.2:-14890323 | None:intergenic |
CCAAGAAAGTGGGCAGGAAG+TGG | 0.484253 | 2.2:+14889981 | MS.gene032118:CDS |
ATGTGCAACACCAGATAATC+CGG | 0.485168 | 2.2:-14892757 | None:intergenic |
AAGTCTAAAGAAGGCATTTG+AGG | 0.485504 | 2.2:+14890295 | MS.gene032118:CDS |
CGCAAATTTGTTATGGAGGA+GGG | 0.487406 | 2.2:+14892781 | MS.gene032118:CDS |
AATGATACTGATTTATCTGA+TGG | 0.487432 | 2.2:+14894061 | MS.gene032118:CDS |
CATTAATCCTCCCAAGGACA+TGG | 0.488021 | 2.2:+14894438 | MS.gene032118:CDS |
TTTAGTTGCTGCTAGCCATC+CGG | 0.489423 | 2.2:+14891343 | MS.gene032118:CDS |
ATTTCTGAATCATCCTCAAC+GGG | 0.489963 | 2.2:-14893472 | None:intergenic |
AGAAGCCGGTTCCGGAAGAC+AGG | 0.492278 | 2.2:+14885615 | MS.gene032118:CDS |
CTGATGGAGTGATCCTTTGT+GGG | 0.494763 | 2.2:+14886926 | MS.gene032118:CDS |
TTGACCAATCCTGTGTATCC+AGG | 0.496798 | 2.2:-14890018 | None:intergenic |
ATTTGTTATGGAGGAGGGAT+GGG | 0.498587 | 2.2:+14892786 | MS.gene032118:CDS |
GGTTGGAACTTTGAAAAGAC+TGG | 0.503883 | 2.2:+14885560 | MS.gene032118:CDS |
TGGGAGCATTTCCACCCAGT+TGG | 0.505198 | 2.2:-14886868 | None:intergenic |
TCAAGATGACGTTGCTCGAA+AGG | 0.505759 | 2.2:+14893811 | MS.gene032118:CDS |
CTTGCAAGGCAAGCTTCTAA+AGG | 0.506121 | 2.2:-14892212 | None:intergenic |
ATGGGAATTGTTAGCCACAT+TGG | 0.506553 | 2.2:+14894328 | MS.gene032118:CDS |
TATGAAAGTGAAACATAGTC+AGG | 0.507916 | 2.2:-14886556 | None:intergenic |
GCGCAAATTTGTTATGGAGG+AGG | 0.509069 | 2.2:+14892780 | MS.gene032118:CDS |
TTGGGAAGGATTATGTGGGT+TGG | 0.509534 | 2.2:+14885543 | MS.gene032118:CDS |
AGATCGTATCTTGTGTTCAT+CGG | 0.510145 | 2.2:+14891852 | MS.gene032118:CDS |
CGATGCATCCGTTTCCAACA+TGG | 0.513394 | 2.2:+14894006 | MS.gene032118:CDS |
TTGTGATAGGTCTGGTGATG+AGG | 0.514427 | 2.2:+14892172 | MS.gene032118:intron |
CAGCATTAGCACGCTCCACT+TGG | 0.514650 | 2.2:-14891783 | None:intergenic |
GCTCCCATTTCGAGAGGGCG+TGG | 0.514907 | 2.2:+14893737 | MS.gene032118:CDS |
GGGGAAGAGCTTCTACCAGA+TGG | 0.515204 | 2.2:+14892971 | MS.gene032118:CDS |
CGGGAGCTGAGAAGCTTGCA+AGG | 0.515232 | 2.2:-14892226 | None:intergenic |
TTCAAATACTAGGAGCAAGA+AGG | 0.522847 | 2.2:+14891296 | MS.gene032118:intron |
TGCTAGATGCGGGTGCTGAA+CGG | 0.523169 | 2.2:+14886752 | MS.gene032118:CDS |
CATGTTGGAAACGGATGCAT+CGG | 0.524637 | 2.2:-14894005 | None:intergenic |
GCTATAAATACATCAAATGC+TGG | 0.525024 | 2.2:+14893568 | MS.gene032118:CDS |
TATAAACCAAAGTCTAAAGA+AGG | 0.526780 | 2.2:+14890286 | MS.gene032118:CDS |
TCCAACACATTATCATCCTC+CGG | 0.529571 | 2.2:-14888985 | None:intergenic |
TACACAGGATTGGTCAATCT+AGG | 0.531009 | 2.2:+14890024 | MS.gene032118:CDS |
TTCTGTGGAATTACCGGAGA+AGG | 0.533894 | 2.2:+14886582 | MS.gene032118:CDS |
TTCTTGCTTGTAGACGCGAT+TGG | 0.533981 | 2.2:-14885325 | None:intergenic |
AATTTGTTATGGAGGAGGGA+TGG | 0.534308 | 2.2:+14892785 | MS.gene032118:CDS |
GATTGTCTGTCTTGTCACAT+TGG | 0.534886 | 2.2:-14886888 | None:intergenic |
AGTAGCATCCATGTTGGAAA+CGG | 0.535832 | 2.2:-14894014 | None:intergenic |
TGGGCAACAAATACCTTCTC+CGG | 0.537224 | 2.2:-14886595 | None:intergenic |
ACAATGTCTTCATTGGCTAA+AGG | 0.540872 | 2.2:-14893496 | None:intergenic |
ACTGCTGATCTGGAGGCAGC+AGG | 0.541599 | 2.2:+14887042 | MS.gene032118:CDS |
GCTAGATGTTGTGCTAAAAG+TGG | 0.543937 | 2.2:-14889009 | None:intergenic |
TTCACTTTCATATCCTTCTG+TGG | 0.545000 | 2.2:+14886567 | MS.gene032118:CDS |
GGGAAGAGCTTCTACCAGAT+GGG | 0.548105 | 2.2:+14892972 | MS.gene032118:CDS |
GTGATGAGGTTGTACGTCCA+AGG | 0.550600 | 2.2:+14892186 | MS.gene032118:CDS |
TCAAATACTAGGAGCAAGAA+GGG | 0.551715 | 2.2:+14891297 | MS.gene032118:intron |
TAATGCTGGGAAAACTGAAC+TGG | 0.553010 | 2.2:+14891798 | MS.gene032118:CDS |
AAGTGGAGCGTGCTAATGCT+GGG | 0.554489 | 2.2:+14891785 | MS.gene032118:CDS |
TACCCACTCGCTGTAAAGCT+CGG | 0.555270 | 2.2:+14887012 | MS.gene032118:CDS |
TGGACCTGGATACACAGGAT+TGG | 0.555748 | 2.2:+14890014 | MS.gene032118:CDS |
ATCAAATGCTGGAGTAGAAG+AGG | 0.558286 | 2.2:+14893579 | MS.gene032118:CDS |
AATATAACCTGTAGGTCGGC+TGG | 0.558667 | 2.2:+14892721 | MS.gene032118:intron |
ATCAGTCACATGCGTAGCAA+AGG | 0.558895 | 2.2:+14892938 | MS.gene032118:CDS |
GTTGCACACATCTTGAAAGA+TGG | 0.559694 | 2.2:+14894376 | MS.gene032118:CDS |
ATGTTGGAAACGGATGCATC+GGG | 0.562262 | 2.2:-14894004 | None:intergenic |
ATATTCTGTTCCACAAGTTG+AGG | 0.563078 | 2.2:+14890688 | MS.gene032118:CDS |
GGAATAGAATCCAAGAAAGT+GGG | 0.563834 | 2.2:+14889971 | MS.gene032118:CDS |
AACTATTACTGCTGATCTGG+AGG | 0.565893 | 2.2:+14887035 | MS.gene032118:CDS |
GGAGCATTTCCACCCAGTTG+GGG | 0.566321 | 2.2:-14886866 | None:intergenic |
TCCGGAGGATGATAATGTGT+TGG | 0.568706 | 2.2:+14888984 | MS.gene032118:CDS |
GATGCTATATTGCTAGATGC+GGG | 0.569791 | 2.2:+14886742 | MS.gene032118:CDS |
TCTGGTAGAAGCTCTTCCCC+AGG | 0.573187 | 2.2:-14892968 | None:intergenic |
CATCTTGAAAGATGGTAGAT+GGG | 0.575725 | 2.2:+14894384 | MS.gene032118:CDS |
AACAGGGTAGGTTTCTTCAA+AGG | 0.576280 | 2.2:-14885638 | None:intergenic |
CCACTTGGTCAAGAAAATGA+AGG | 0.579718 | 2.2:-14891768 | None:intergenic |
TTTGAAGAAACCTACCCTGT+TGG | 0.582281 | 2.2:+14885640 | MS.gene032118:CDS |
TTTCTTACAACTGCATGTTG+AGG | 0.582850 | 2.2:-14890343 | None:intergenic |
GACTTGGTTACTAGCTCACA+TGG | 0.583662 | 2.2:+14893606 | MS.gene032118:CDS |
AAAGCTCACCGCAGATTTAG+GGG | 0.584213 | 2.2:-14890818 | None:intergenic |
TGTGAAGAAGACGAAGAAGC+CGG | 0.585540 | 2.2:+14885601 | MS.gene032118:CDS |
GAAAGCAAAGAAACTTTCTG+AGG | 0.587608 | 2.2:+14892063 | MS.gene032118:CDS |
ACTGATTTATCTGATGGAGG+AGG | 0.591473 | 2.2:+14894067 | MS.gene032118:CDS |
TAGAATCCAAGAAAGTGGGC+AGG | 0.591771 | 2.2:+14889975 | MS.gene032118:CDS |
GTAGCAAAGGTCATCAACCT+GGG | 0.592394 | 2.2:+14892951 | MS.gene032118:CDS |
TGATGCTATATTGCTAGATG+CGG | 0.593007 | 2.2:+14886741 | MS.gene032118:CDS |
TATTTCTGAATCATCCTCAA+CGG | 0.593804 | 2.2:-14893473 | None:intergenic |
ACATTGAGAAAGCAACAGAC+TGG | 0.594075 | 2.2:+14893969 | MS.gene032118:CDS |
AGATGCGGGTGCTGAACGGA+AGG | 0.595022 | 2.2:+14886756 | MS.gene032118:CDS |
CATGCGCAAATTTGTTATGG+AGG | 0.598160 | 2.2:+14892777 | MS.gene032118:CDS |
ATGCATCTGTAGGTATTGAT+GGG | 0.598292 | 2.2:+14886479 | MS.gene032118:intron |
TGCATGTTGAGGTCCACAGT+TGG | 0.598934 | 2.2:-14890332 | None:intergenic |
ATTTGATCGGAGCAAATCCA+TGG | 0.599005 | 2.2:-14885274 | None:intergenic |
TTCTCCGGTAATTCCACAGA+AGG | 0.599224 | 2.2:-14886580 | None:intergenic |
GTAGCATATCAACTTTCGAC+TGG | 0.599715 | 2.2:-14893775 | None:intergenic |
CTAGTACATACCTCAACTTG+TGG | 0.600269 | 2.2:-14890698 | None:intergenic |
GCATTTGGGAAGGATTATGT+GGG | 0.605030 | 2.2:+14885539 | MS.gene032118:CDS |
GTTCCGAGCTTTACAGCGAG+TGG | 0.609506 | 2.2:-14887015 | None:intergenic |
ACCAAACTTGAAACTCCTTG+CGG | 0.609907 | 2.2:-14891824 | None:intergenic |
TTCCGAGCTTTACAGCGAGT+GGG | 0.610350 | 2.2:-14887014 | None:intergenic |
GGCTTCCATTAATCCTCCCA+AGG | 0.611522 | 2.2:+14894432 | MS.gene032118:CDS |
TAATCAGACTGAAATGACTA+CGG | 0.613034 | 2.2:+14889912 | MS.gene032118:intron |
GAGTAGAAGAGGCAATGACT+TGG | 0.614884 | 2.2:+14893590 | MS.gene032118:CDS |
GGAAGGAGCAAGTTGCAGCA+TGG | 0.618325 | 2.2:+14886773 | MS.gene032118:CDS |
GATACTGATTTATCTGATGG+AGG | 0.621348 | 2.2:+14894064 | MS.gene032118:CDS |
AAAGCAAAGAAACTTTCTGA+GGG | 0.623063 | 2.2:+14892064 | MS.gene032118:CDS |
ATTAATCCTCCCAAGGACAT+GGG | 0.630490 | 2.2:+14894439 | MS.gene032118:CDS |
TGCAAGCTTCTCAGCTCCCG+AGG | 0.630850 | 2.2:+14892229 | MS.gene032118:CDS |
AAACTGAACTGGATCCCGCA+AGG | 0.633426 | 2.2:+14891809 | MS.gene032118:CDS |
AATTTACAGCAAATTGACAA+TGG | 0.637927 | 2.2:+14886832 | MS.gene032118:CDS |
GAACTCGAGAGAGATTTGAT+CGG | 0.641844 | 2.2:-14885287 | None:intergenic |
TCGAAAGGCACTGATAGCAT+CGG | 0.644009 | 2.2:+14893826 | MS.gene032118:CDS |
GGAAGAGCTTCTACCAGATG+GGG | 0.644506 | 2.2:+14892973 | MS.gene032118:CDS |
GAGCATTTCCACCCAGTTGG+GGG | 0.645122 | 2.2:-14886865 | None:intergenic |
TTGCATGAAGCAACTAACAA+AGG | 0.649182 | 2.2:+14891928 | MS.gene032118:CDS |
ATTGATGCTCCCATTTCGAG+AGG | 0.654004 | 2.2:+14893731 | MS.gene032118:CDS |
TGCATCTGTAGGTATTGATG+GGG | 0.655166 | 2.2:+14886480 | MS.gene032118:intron |
AGATAGCCCATGTCCTTGGG+AGG | 0.656852 | 2.2:-14894445 | None:intergenic |
GGCTCCTGCTGATCCAACTG+TGG | 0.659783 | 2.2:+14890319 | MS.gene032118:CDS |
TGAAAATACAGCTTGCATAG+TGG | 0.660206 | 2.2:-14890157 | None:intergenic |
TCTAAAGAAGGCATTTGAGG+AGG | 0.662919 | 2.2:+14890298 | MS.gene032118:CDS |
TGCAAGCACCCCTAAATCTG+CGG | 0.664901 | 2.2:+14890810 | MS.gene032118:CDS |
TTGATGCTCCCATTTCGAGA+GGG | 0.665706 | 2.2:+14893732 | MS.gene032118:CDS |
ATAGTGACCGCAGTGTGTTG+AGG | 0.668427 | 2.2:-14894353 | None:intergenic |
TGATGAGGTTGTACGTCCAA+GGG | 0.669779 | 2.2:+14892187 | MS.gene032118:CDS |
TGATGCAGTAGCATCCATGT+TGG | 0.673342 | 2.2:-14894020 | None:intergenic |
AAACCTATAGCCAACAGGGT+AGG | 0.677292 | 2.2:-14885650 | None:intergenic |
TCTAGGACGAAACTTGCACA+TGG | 0.681126 | 2.2:+14890650 | MS.gene032118:intron |
GAAGAGCTTCTACCAGATGG+GGG | 0.686244 | 2.2:+14892974 | MS.gene032118:CDS |
GCATAGTAGAAAATTCCGGA+TGG | 0.692803 | 2.2:-14891358 | None:intergenic |
ACACAAACCTATAGCCAACA+GGG | 0.692944 | 2.2:-14885654 | None:intergenic |
GTGTTGCACAGTACCCGTTG+AGG | 0.709727 | 2.2:+14893459 | MS.gene032118:intron |
TAGCAAAGGTCATCAACCTG+GGG | 0.714337 | 2.2:+14892952 | MS.gene032118:CDS |
GCATCTGTAGGTATTGATGG+GGG | 0.718341 | 2.2:+14886481 | MS.gene032118:intron |
ATGGAGTGATCCTTTGTGGG+AGG | 0.719607 | 2.2:+14886929 | MS.gene032118:CDS |
ATTGGAACCTCAACACACTG+CGG | 0.742727 | 2.2:+14894346 | MS.gene032118:CDS |
AGTGTGTTGAGGTTCCAATG+TGG | 0.787141 | 2.2:-14894342 | None:intergenic |
TTGGTTACTAGCTCACATGG+AGG | 0.794926 | 2.2:+14893609 | MS.gene032118:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 14885276 | 14894489 | 14885276 | ID=MS.gene032118 |
chr2.2 | mRNA | 14885276 | 14894489 | 14885276 | ID=MS.gene032118.t1;Parent=MS.gene032118 |
chr2.2 | exon | 14885276 | 14885371 | 14885276 | ID=MS.gene032118.t1.exon1;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14885276 | 14885371 | 14885276 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14885497 | 14885668 | 14885497 | ID=MS.gene032118.t1.exon2;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14885497 | 14885668 | 14885497 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14886491 | 14886603 | 14886491 | ID=MS.gene032118.t1.exon3;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14886491 | 14886603 | 14886491 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14886727 | 14887063 | 14886727 | ID=MS.gene032118.t1.exon4;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14886727 | 14887063 | 14886727 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14888971 | 14889065 | 14888971 | ID=MS.gene032118.t1.exon5;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14888971 | 14889065 | 14888971 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14889919 | 14890052 | 14889919 | ID=MS.gene032118.t1.exon6;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14889919 | 14890052 | 14889919 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14890143 | 14890199 | 14890143 | ID=MS.gene032118.t1.exon7;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14890143 | 14890199 | 14890143 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14890280 | 14890357 | 14890280 | ID=MS.gene032118.t1.exon8;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14890280 | 14890357 | 14890280 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14890655 | 14890709 | 14890655 | ID=MS.gene032118.t1.exon9;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14890655 | 14890709 | 14890655 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14890790 | 14890831 | 14890790 | ID=MS.gene032118.t1.exon10;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14890790 | 14890831 | 14890790 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14891308 | 14891388 | 14891308 | ID=MS.gene032118.t1.exon11;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14891308 | 14891388 | 14891308 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14891751 | 14891949 | 14891751 | ID=MS.gene032118.t1.exon12;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14891751 | 14891949 | 14891751 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14892038 | 14892095 | 14892038 | ID=MS.gene032118.t1.exon13;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14892038 | 14892095 | 14892038 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14892181 | 14892303 | 14892181 | ID=MS.gene032118.t1.exon14;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14892181 | 14892303 | 14892181 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14892735 | 14892823 | 14892735 | ID=MS.gene032118.t1.exon15;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14892735 | 14892823 | 14892735 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14892906 | 14892995 | 14892906 | ID=MS.gene032118.t1.exon16;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14892906 | 14892995 | 14892906 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14893470 | 14893637 | 14893470 | ID=MS.gene032118.t1.exon17;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14893470 | 14893637 | 14893470 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14893729 | 14893847 | 14893729 | ID=MS.gene032118.t1.exon18;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14893729 | 14893847 | 14893729 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14893962 | 14894091 | 14893962 | ID=MS.gene032118.t1.exon19;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14893962 | 14894091 | 14893962 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
chr2.2 | exon | 14894317 | 14894489 | 14894317 | ID=MS.gene032118.t1.exon20;Parent=MS.gene032118.t1 |
chr2.2 | CDS | 14894317 | 14894489 | 14894317 | ID=cds.MS.gene032118.t1;Parent=MS.gene032118.t1 |
Gene Sequence |
Protein sequence |