Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032904.t1 | XP_003613768.1 | 94.8 | 291 | 10 | 2 | 1 | 287 | 1 | 290 | 1.50E-138 | 502.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032904.t1 | A0JN69 | 39.1 | 64 | 36 | 1 | 67 | 130 | 71 | 131 | 1.1e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032904.t1 | G7KF80 | 94.8 | 291 | 10 | 2 | 1 | 287 | 1 | 290 | 1.1e-138 | 502.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070573 | MS.gene032904 | PPI |
| MS.gene032904 | MS.gene34660 | PPI |
| MS.gene36852 | MS.gene032904 | PPI |
| MS.gene25499 | MS.gene032904 | PPI |
| MS.gene34660 | MS.gene032904 | PPI |
| MS.gene55219 | MS.gene032904 | PPI |
| MS.gene045950 | MS.gene032904 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032904.t1 | MTR_5g040650 | 97.595 | 291 | 2 | 2 | 1 | 287 | 1 | 290 | 0.0 | 569 |
| MS.gene032904.t1 | MTR_5g040650 | 97.211 | 251 | 2 | 2 | 1 | 247 | 1 | 250 | 8.41e-178 | 490 |
| MS.gene032904.t1 | MTR_8g467220 | 75.258 | 291 | 62 | 6 | 1 | 287 | 1 | 285 | 1.71e-135 | 384 |
| MS.gene032904.t1 | MTR_1g108490 | 44.681 | 188 | 98 | 4 | 63 | 248 | 55 | 238 | 1.70e-55 | 180 |
| MS.gene032904.t1 | MTR_1g108490 | 44.444 | 162 | 84 | 2 | 63 | 224 | 55 | 210 | 9.45e-47 | 156 |
| MS.gene032904.t1 | MTR_7g082950 | 37.981 | 208 | 118 | 6 | 65 | 270 | 14 | 212 | 4.38e-44 | 149 |
| MS.gene032904.t1 | MTR_7g082950 | 46.377 | 138 | 65 | 4 | 65 | 202 | 14 | 142 | 9.49e-39 | 134 |
| MS.gene032904.t1 | MTR_7g109460 | 40.642 | 187 | 93 | 8 | 67 | 247 | 20 | 194 | 1.31e-37 | 132 |
| MS.gene032904.t1 | MTR_1g087150 | 40.571 | 175 | 96 | 5 | 56 | 225 | 9 | 180 | 1.00e-30 | 114 |
| MS.gene032904.t1 | MTR_7g109460 | 42.177 | 147 | 71 | 5 | 67 | 209 | 20 | 156 | 1.13e-30 | 113 |
| MS.gene032904.t1 | MTR_1g087150 | 40.571 | 175 | 96 | 5 | 56 | 225 | 9 | 180 | 3.06e-30 | 114 |
| MS.gene032904.t1 | MTR_7g010610 | 49.275 | 69 | 35 | 0 | 63 | 131 | 31 | 99 | 1.59e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032904.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 57 | 276 | 33 | 250 | 1.24e-105 | 308 |
| MS.gene032904.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 57 | 276 | 33 | 250 | 1.24e-105 | 308 |
| MS.gene032904.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 57 | 276 | 33 | 250 | 1.24e-105 | 308 |
| MS.gene032904.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 57 | 276 | 33 | 250 | 1.24e-105 | 308 |
| MS.gene032904.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 57 | 276 | 33 | 250 | 1.24e-105 | 308 |
| MS.gene032904.t1 | AT3G47550 | 64.706 | 289 | 90 | 6 | 1 | 282 | 1 | 284 | 1.07e-103 | 304 |
| MS.gene032904.t1 | AT3G47550 | 64.706 | 289 | 90 | 6 | 1 | 282 | 1 | 284 | 1.07e-103 | 304 |
| MS.gene032904.t1 | AT5G62460 | 74.561 | 228 | 48 | 4 | 56 | 275 | 80 | 305 | 7.00e-89 | 268 |
| MS.gene032904.t1 | AT5G62460 | 74.123 | 228 | 49 | 4 | 56 | 275 | 67 | 292 | 8.24e-89 | 267 |
| MS.gene032904.t1 | AT5G62460 | 74.123 | 228 | 49 | 4 | 56 | 275 | 67 | 292 | 8.24e-89 | 267 |
| MS.gene032904.t1 | AT1G14260 | 62.642 | 265 | 84 | 5 | 4 | 267 | 5 | 255 | 8.90e-89 | 265 |
| MS.gene032904.t1 | AT1G14260 | 62.642 | 265 | 84 | 5 | 4 | 267 | 5 | 255 | 8.90e-89 | 265 |
| MS.gene032904.t1 | AT1G14260 | 62.642 | 265 | 84 | 5 | 4 | 267 | 5 | 255 | 8.90e-89 | 265 |
| MS.gene032904.t1 | AT3G47550 | 64.082 | 245 | 78 | 5 | 1 | 240 | 1 | 240 | 3.30e-86 | 258 |
| MS.gene032904.t1 | AT2G02960 | 78.082 | 146 | 30 | 1 | 57 | 202 | 33 | 176 | 5.69e-69 | 215 |
| MS.gene032904.t1 | AT3G47550 | 60.538 | 223 | 78 | 5 | 1 | 218 | 1 | 218 | 1.64e-68 | 213 |
| MS.gene032904.t1 | AT2G01275 | 38.934 | 244 | 128 | 7 | 1 | 242 | 1 | 225 | 5.84e-50 | 166 |
| MS.gene032904.t1 | AT2G01275 | 38.934 | 244 | 128 | 7 | 1 | 242 | 1 | 225 | 5.84e-50 | 166 |
| MS.gene032904.t1 | AT2G01275 | 38.934 | 244 | 128 | 7 | 1 | 242 | 1 | 225 | 5.84e-50 | 166 |
| MS.gene032904.t1 | AT2G01275 | 38.934 | 244 | 128 | 7 | 1 | 242 | 27 | 251 | 6.56e-50 | 166 |
| MS.gene032904.t1 | AT2G01275 | 38.934 | 244 | 128 | 7 | 1 | 242 | 27 | 251 | 6.56e-50 | 166 |
| MS.gene032904.t1 | AT5G38070 | 36.255 | 251 | 135 | 6 | 1 | 249 | 1 | 228 | 3.37e-41 | 143 |
| MS.gene032904.t1 | AT4G02075 | 37.629 | 194 | 103 | 4 | 56 | 247 | 9 | 186 | 1.08e-38 | 135 |
| MS.gene032904.t1 | AT4G02075 | 37.629 | 194 | 103 | 4 | 56 | 247 | 9 | 186 | 1.20e-38 | 135 |
| MS.gene032904.t1 | AT1G02610 | 36.066 | 183 | 106 | 4 | 67 | 247 | 20 | 193 | 8.62e-33 | 120 |
| MS.gene032904.t1 | AT1G02610 | 36.066 | 183 | 106 | 4 | 67 | 247 | 20 | 193 | 1.30e-32 | 119 |
| MS.gene032904.t1 | AT4G02075 | 38.596 | 171 | 84 | 5 | 56 | 221 | 9 | 163 | 1.73e-31 | 115 |
Find 91 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAACCACTATTGAAAT+AGG | 0.204032 | 5.4:-30337843 | MS.gene032904:CDS |
| GGAAGACAGTGTTTCCAATT+TGG | 0.231303 | 5.4:-30339816 | MS.gene032904:CDS |
| GTGCATGCCGCAAAAGTAAA+AGG | 0.236416 | 5.4:+30337187 | None:intergenic |
| CTTGCGTGATCCTCGACTTT+TGG | 0.256892 | 5.4:-30337616 | MS.gene032904:CDS |
| ATAGTGGTTTCTTCAGGAAT+AGG | 0.347604 | 5.4:+30337852 | None:intergenic |
| AATATTCAGCCTTATCAATC+TGG | 0.348621 | 5.4:-30337897 | MS.gene032904:intron |
| ATTTCAATAGTGGTTTCTTC+AGG | 0.350976 | 5.4:+30337846 | None:intergenic |
| ATCTTACCCTATTTCAATAG+TGG | 0.355747 | 5.4:+30337836 | None:intergenic |
| ACTGCTGATGCCGGATCATC+TGG | 0.359419 | 5.4:-30339917 | MS.gene032904:CDS |
| AGAGGAGGCTGGACATTATC+TGG | 0.364653 | 5.4:-30337651 | MS.gene032904:CDS |
| TACCTTGCTATATTATGGCT+TGG | 0.367363 | 5.4:-30336979 | MS.gene032904:CDS |
| TCAGGAATAGGGCGAGGTGG+TGG | 0.373410 | 5.4:+30337864 | None:intergenic |
| ACCTTGCTATATTATGGCTT+GGG | 0.376940 | 5.4:-30336978 | MS.gene032904:CDS |
| GGCACAGGGAGTCTCCAAAT+TGG | 0.387742 | 5.4:+30339802 | None:intergenic |
| TGTTGGTCAACAGGAACAAC+TGG | 0.394104 | 5.4:+30339989 | None:intergenic |
| TAGTGGTTTCTTCAGGAATA+GGG | 0.397798 | 5.4:+30337853 | None:intergenic |
| CTTTCTCATTGCACCAATGC+TGG | 0.404082 | 5.4:+30338711 | None:intergenic |
| GAAGGTGGTGGGCAGGTTGT+TGG | 0.414952 | 5.4:+30339972 | None:intergenic |
| GACATTATCTGGCTCACCCT+TGG | 0.418122 | 5.4:-30337640 | MS.gene032904:CDS |
| AACTTTCTTGCAGAGGAGGC+TGG | 0.424560 | 5.4:-30337662 | MS.gene032904:intron |
| AGAGGCAGAACGTCAATTCC+TGG | 0.431011 | 5.4:-30337586 | MS.gene032904:CDS |
| TGGGCAGGTTGTTGGTCAAC+AGG | 0.434759 | 5.4:+30339980 | None:intergenic |
| AAGAAACCACTATTGAAATA+GGG | 0.437347 | 5.4:-30337842 | MS.gene032904:intron |
| ACTGTAGGTCCTGGAGGTCC+TGG | 0.440890 | 5.4:+30336657 | None:intergenic |
| TCTCCTGCCACTGCTGATGC+CGG | 0.451697 | 5.4:-30339926 | MS.gene032904:CDS |
| AATGATCGGAAGGAAGGTGG+TGG | 0.456132 | 5.4:+30339960 | None:intergenic |
| ACTACCAAGTGATCGCTCAT+TGG | 0.456166 | 5.4:+30340034 | None:intergenic |
| CAGGAATAGGGCGAGGTGGT+GGG | 0.456864 | 5.4:+30337865 | None:intergenic |
| GAACACTGACTTGTCTTTGT+CGG | 0.478778 | 5.4:+30336933 | None:intergenic |
| AATTTAGAACAAAAGCAACT+TGG | 0.479789 | 5.4:+30336715 | None:intergenic |
| TCCTGCTGTACTGTAGGTCC+TGG | 0.480306 | 5.4:+30336648 | None:intergenic |
| AGATACGGCACTCAACCATC+TGG | 0.480714 | 5.4:+30339846 | None:intergenic |
| TCCTGGAGGTCCTGGTGCTA+TGG | 0.494451 | 5.4:+30336665 | None:intergenic |
| CAGTGGCAGGAGATGGCGAT+GGG | 0.494476 | 5.4:+30339936 | None:intergenic |
| GATGCCGGATCATCTGGATC+TGG | 0.496615 | 5.4:-30339911 | MS.gene032904:CDS |
| TCGGAAGGAAGGTGGTGGGC+AGG | 0.502664 | 5.4:+30339965 | None:intergenic |
| GAGACTACCGCTACAGGCAC+AGG | 0.503593 | 5.4:+30339787 | None:intergenic |
| AACTTGTGAGATATGTCATC+AGG | 0.505014 | 5.4:-30338681 | MS.gene032904:intron |
| TACCTTGAGACTACCGCTAC+AGG | 0.507838 | 5.4:+30339781 | None:intergenic |
| CAGCATTGGTGCAATGAGAA+AGG | 0.519925 | 5.4:-30338710 | MS.gene032904:CDS |
| ATTTAGAACAAAAGCAACTT+GGG | 0.519948 | 5.4:+30336716 | None:intergenic |
| GCCATAGCACCAGGACCTCC+AGG | 0.524360 | 5.4:-30336666 | MS.gene032904:CDS |
| GGAACCAGATCCAGATGATC+CGG | 0.527244 | 5.4:+30339907 | None:intergenic |
| GATCCGGCATCAGCAGTGGC+AGG | 0.529047 | 5.4:+30339923 | None:intergenic |
| GCATCAGCAGTGGCAGGAGA+TGG | 0.530163 | 5.4:+30339929 | None:intergenic |
| GGGAATGATCGGAAGGAAGG+TGG | 0.530407 | 5.4:+30339957 | None:intergenic |
| TCGAGGATCACGCAAGTCCA+AGG | 0.531123 | 5.4:+30337623 | None:intergenic |
| TCCAGGACCTACAGTACAGC+AGG | 0.533517 | 5.4:-30336649 | MS.gene032904:CDS |
| ACAGAAAGTGTGTCCAGCAT+TGG | 0.533571 | 5.4:-30338724 | MS.gene032904:CDS |
| ACTTGTTCCTGCTGTACTGT+AGG | 0.533667 | 5.4:+30336642 | None:intergenic |
| TTTCCCAATGAGCGATCACT+TGG | 0.540113 | 5.4:-30340038 | None:intergenic |
| GCAGTATACCCAGATTGATA+AGG | 0.540164 | 5.4:+30337888 | None:intergenic |
| TGCATGCCGCAAAAGTAAAA+GGG | 0.544452 | 5.4:+30337188 | None:intergenic |
| GCAGTGGCAGGAGATGGCGA+TGG | 0.545980 | 5.4:+30339935 | None:intergenic |
| ATGGGGAATGATCGGAAGGA+AGG | 0.548616 | 5.4:+30339954 | None:intergenic |
| GAACAACTGGGTGGTCGAGT+TGG | 0.550257 | 5.4:+30340002 | None:intergenic |
| CTACACTTCGCCATAGCACC+AGG | 0.550759 | 5.4:-30336675 | MS.gene032904:CDS |
| ATATTCAGCCTTATCAATCT+GGG | 0.551118 | 5.4:-30337896 | MS.gene032904:intron |
| ACTCATCATATTCAGCATCC+AGG | 0.551789 | 5.4:+30337568 | None:intergenic |
| AGATGGCGATGGGGAATGAT+CGG | 0.552402 | 5.4:+30339946 | None:intergenic |
| TGCTGTACTGTAGGTCCTGG+AGG | 0.564156 | 5.4:+30336651 | None:intergenic |
| AGGAATAGGGCGAGGTGGTG+GGG | 0.566322 | 5.4:+30337866 | None:intergenic |
| TGCCTGTAGCGGTAGTCTCA+AGG | 0.574911 | 5.4:-30339783 | MS.gene032904:intron |
| GTTTCTTCAGGAATAGGGCG+AGG | 0.582205 | 5.4:+30337858 | None:intergenic |
| GGCGATGGGGAATGATCGGA+AGG | 0.583505 | 5.4:+30339950 | None:intergenic |
| ATCTGGATCTGGTTCCGCGG+TGG | 0.583717 | 5.4:-30339900 | MS.gene032904:CDS |
| TGTCTTCCTCTTGACAGATA+CGG | 0.587889 | 5.4:+30339831 | None:intergenic |
| CATGCACTCTCTGTAACAGA+TGG | 0.596020 | 5.4:-30337171 | MS.gene032904:CDS |
| ATGATCGGAAGGAAGGTGGT+GGG | 0.601522 | 5.4:+30339961 | None:intergenic |
| TATGCTGCTTCTAATGCTAG+TGG | 0.606341 | 5.4:-30337546 | MS.gene032904:CDS |
| CTAAATTCTGGGCAGCGTAG+AGG | 0.608192 | 5.4:-30336699 | MS.gene032904:CDS |
| GGTTCCGCGGTGGATCGTGA+TGG | 0.608708 | 5.4:-30339890 | MS.gene032904:CDS |
| CACTGACTTGTCTTTGTCGG+CGG | 0.613302 | 5.4:+30336936 | None:intergenic |
| GGATCGTGATGGCGATGAGG+AGG | 0.616205 | 5.4:-30339879 | MS.gene032904:CDS |
| GCCCAAGCCATAATATAGCA+AGG | 0.617032 | 5.4:+30336977 | None:intergenic |
| CGAGGATCACGCAAGTCCAA+GGG | 0.619797 | 5.4:+30337624 | None:intergenic |
| AGATGATCCGGCATCAGCAG+TGG | 0.627660 | 5.4:+30339919 | None:intergenic |
| CACTCAACCATCTGGATCAG+CGG | 0.632608 | 5.4:+30339854 | None:intergenic |
| AGACTACCGCTACAGGCACA+GGG | 0.636998 | 5.4:+30339788 | None:intergenic |
| GGAGGAGCCGCTGATCCAGA+TGG | 0.637173 | 5.4:-30339861 | MS.gene032904:CDS |
| GAGACTCCCTGTGCCTGTAG+CGG | 0.639323 | 5.4:-30339794 | MS.gene032904:CDS |
| TCTTCAGGAATAGGGCGAGG+TGG | 0.642080 | 5.4:+30337861 | None:intergenic |
| TCTGCAATCGCCAAAAGTCG+AGG | 0.642761 | 5.4:+30337606 | None:intergenic |
| ATCATCTGGATCTGGTTCCG+CGG | 0.646013 | 5.4:-30339903 | MS.gene032904:CDS |
| TGAGTGCCGTATCTGTCAAG+AGG | 0.648467 | 5.4:-30339837 | MS.gene032904:CDS |
| GTTGGTCAACAGGAACAACT+GGG | 0.659884 | 5.4:+30339990 | None:intergenic |
| GGTGGATCGTGATGGCGATG+AGG | 0.679783 | 5.4:-30339882 | MS.gene032904:CDS |
| AGTGGCAGGAGATGGCGATG+GGG | 0.704357 | 5.4:+30339937 | None:intergenic |
| ATCGCCATCACGATCCACCG+CGG | 0.714224 | 5.4:+30339886 | None:intergenic |
| TTACAATTAGAGCAGCTGAG+CGG | 0.741254 | 5.4:+30337511 | None:intergenic |
| GGTCAACAGGAACAACTGGG+TGG | 0.749101 | 5.4:+30339993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATATAATATAATT+AGG | + | chr5.4:30338710-30338729 | None:intergenic | 0.0% |
| !!! | TTGTTTTGTTTTTTTTTTTA+TGG | - | chr5.4:30336966-30336985 | MS.gene032904:CDS | 10.0% |
| !! | TTCATAAAAAATGTGAATAA+TGG | - | chr5.4:30337411-30337430 | MS.gene032904:intron | 15.0% |
| !! | TTTGTCTATGAAAAAAATAT+GGG | - | chr5.4:30338529-30338548 | MS.gene032904:intron | 15.0% |
| !!! | ATGTGAATATTTTTTTAAAG+TGG | - | chr5.4:30338077-30338096 | MS.gene032904:intron | 15.0% |
| !!! | CGTTATTTTTTAATTTTTGT+AGG | - | chr5.4:30336936-30336955 | MS.gene032904:intron | 15.0% |
| !!! | TTTTGTCTATGAAAAAAATA+TGG | - | chr5.4:30338528-30338547 | MS.gene032904:intron | 15.0% |
| !! | AAAATTCCACACAAAAATAT+CGG | + | chr5.4:30337437-30337456 | None:intergenic | 20.0% |
| !! | AAGTCATGTATATAACATAT+AGG | - | chr5.4:30338263-30338282 | MS.gene032904:intron | 20.0% |
| !! | AATCAATAATCATGTTTGAT+TGG | - | chr5.4:30337072-30337091 | MS.gene032904:intron | 20.0% |
| !! | ACATAAATCAATATAACAGT+CGG | + | chr5.4:30339601-30339620 | None:intergenic | 20.0% |
| !! | ATATGTTATATACATGACTT+GGG | + | chr5.4:30338263-30338282 | None:intergenic | 20.0% |
| !! | ATCAATAATCATGTTTGATT+GGG | - | chr5.4:30337073-30337092 | MS.gene032904:intron | 20.0% |
| !! | GTACCAAACATTAAAAAATT+GGG | + | chr5.4:30339452-30339471 | None:intergenic | 20.0% |
| !! | TATATGTTATATACATGACT+TGG | + | chr5.4:30338264-30338283 | None:intergenic | 20.0% |
| !! | TGTACCAAACATTAAAAAAT+TGG | + | chr5.4:30339453-30339472 | None:intergenic | 20.0% |
| !! | TTACAAAACTCTGTATAATT+TGG | - | chr5.4:30339208-30339227 | MS.gene032904:intron | 20.0% |
| !! | TTGTCTATGAAAAAAATATG+GGG | - | chr5.4:30338530-30338549 | MS.gene032904:intron | 20.0% |
| !!! | TAACCCAATTTTTTAATGTT+TGG | - | chr5.4:30339446-30339465 | MS.gene032904:intron | 20.0% |
| !!! | TTATACAGAGTTTTGTAAAA+TGG | + | chr5.4:30339206-30339225 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTGTTAGGAAAT+GGG | - | chr5.4:30338461-30338480 | MS.gene032904:intron | 20.0% |
| !!! | TTTTCAATTTTGTTAGGAAA+TGG | - | chr5.4:30338460-30338479 | MS.gene032904:intron | 20.0% |
| ! | AAGAAACCACTATTGAAATA+GGG | - | chr5.4:30338827-30338846 | MS.gene032904:intron | 25.0% |
| ! | AAGCAAAAAACAATTTCTCA+CGG | + | chr5.4:30337786-30337805 | None:intergenic | 25.0% |
| ! | ACACAAATGATATTAAGCAT+TGG | + | chr5.4:30338679-30338698 | None:intergenic | 25.0% |
| ! | CACAAATGATATTAAGCATT+GGG | + | chr5.4:30338678-30338697 | None:intergenic | 25.0% |
| ! | CACAACTAAATTATACTTCA+AGG | - | chr5.4:30338579-30338598 | MS.gene032904:intron | 25.0% |
| ! | GAGTTTATGAAATATTGTGT+TGG | - | chr5.4:30337692-30337711 | MS.gene032904:intron | 25.0% |
| ! | TATGAAGCTAATTCAGATTA+GGG | + | chr5.4:30337397-30337416 | None:intergenic | 25.0% |
| ! | TCAATAATCATGTTTGATTG+GGG | - | chr5.4:30337074-30337093 | MS.gene032904:intron | 25.0% |
| ! | TCCTAACAAAATTGAAAATC+AGG | + | chr5.4:30338458-30338477 | None:intergenic | 25.0% |
| ! | TGATCGATCAATTTGAAAAA+TGG | - | chr5.4:30337313-30337332 | MS.gene032904:intron | 25.0% |
| ! | TGATTAATGCATTAATGTGA+TGG | - | chr5.4:30337819-30337838 | MS.gene032904:intron | 25.0% |
| ! | TGTCTATGAAAAAAATATGG+GGG | - | chr5.4:30338531-30338550 | MS.gene032904:intron | 25.0% |
| ! | TTATGAAGCTAATTCAGATT+AGG | + | chr5.4:30337398-30337417 | None:intergenic | 25.0% |
| !! | AATTTAGAACAAAAGCAACT+TGG | + | chr5.4:30339957-30339976 | None:intergenic | 25.0% |
| !! | ATTTAGAACAAAAGCAACTT+GGG | + | chr5.4:30339956-30339975 | None:intergenic | 25.0% |
| !! | ATTTTTGAACTGTTGGTATT+TGG | - | chr5.4:30337905-30337924 | MS.gene032904:intron | 25.0% |
| !! | CTAATAAGTTGTCTTTTTGT+CGG | - | chr5.4:30338042-30338061 | MS.gene032904:intron | 25.0% |
| !! | TCCTGATTTTCAATTTTGTT+AGG | - | chr5.4:30338454-30338473 | MS.gene032904:intron | 25.0% |
| !! | TTGTAACTTTGTATTTTGTG+TGG | - | chr5.4:30338627-30338646 | MS.gene032904:intron | 25.0% |
| !!! | ACTGTTTTTGTATTTTGAAC+AGG | - | chr5.4:30339909-30339928 | MS.gene032904:CDS | 25.0% |
| !!! | GTTATATTGATTTATGTGAC+CGG | - | chr5.4:30339604-30339623 | MS.gene032904:intron | 25.0% |
| !!! | TCTTTTACCTTGCTATATTA+TGG | - | chr5.4:30339685-30339704 | MS.gene032904:intron | 25.0% |
| !!! | TTGCTTTTGTTCTAAATTCT+GGG | - | chr5.4:30339959-30339978 | MS.gene032904:CDS | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | + | chr5.4:30337101-30337120 | None:intergenic | 30.0% | |
| AAAGCTCTATTGTTAGTAGA+AGG | + | chr5.4:30338223-30338242 | None:intergenic | 30.0% | |
| AGCAAAAAACAATTTCTCAC+GGG | + | chr5.4:30337785-30337804 | None:intergenic | 30.0% | |
| ATACCAACAGTTCAAAAATC+AGG | + | chr5.4:30337904-30337923 | None:intergenic | 30.0% | |
| ATAGAGACTCAAATCACTTA+CGG | + | chr5.4:30339559-30339578 | None:intergenic | 30.0% | |
| ATCACTTACGGAGAAAAAAT+TGG | + | chr5.4:30339547-30339566 | None:intergenic | 30.0% | |
| ATCCACATCAATGTAGAAAA+TGG | + | chr5.4:30337672-30337691 | None:intergenic | 30.0% | |
| ATCTTACCCTATTTCAATAG+TGG | + | chr5.4:30338836-30338855 | None:intergenic | 30.0% | |
| ATGAAGCTAATTCAGATTAG+GGG | + | chr5.4:30337396-30337415 | None:intergenic | 30.0% | |
| ATTTCAATAGTGGTTTCTTC+AGG | + | chr5.4:30338826-30338845 | None:intergenic | 30.0% | |
| CAATAATCATGTTTGATTGG+GGG | - | chr5.4:30337075-30337094 | MS.gene032904:intron | 30.0% | |
| CGACAAAAAGACAACTTATT+AGG | + | chr5.4:30338044-30338063 | None:intergenic | 30.0% | |
| CGATCAATTTGAAAAATGGT+TGG | - | chr5.4:30337317-30337336 | MS.gene032904:intron | 30.0% | |
| GAAGAAACCACTATTGAAAT+AGG | - | chr5.4:30338826-30338845 | MS.gene032904:intron | 30.0% | |
| GCAGCTTATACAAATAAGTA+AGG | - | chr5.4:30337135-30337154 | MS.gene032904:CDS | 30.0% | |
| GTCTATGAAAAAAATATGGG+GGG | - | chr5.4:30338532-30338551 | MS.gene032904:intron | 30.0% | |
| TACAGTAGTGTAACATATGT+TGG | - | chr5.4:30338287-30338306 | MS.gene032904:intron | 30.0% | |
| TATCATTCATAAGCTTGTCA+AGG | - | chr5.4:30337165-30337184 | MS.gene032904:CDS | 30.0% | |
| TCCACATCAATGTAGAAAAT+GGG | + | chr5.4:30337671-30337690 | None:intergenic | 30.0% | |
| TGATCGATCATATCATTCTA+GGG | + | chr5.4:30337303-30337322 | None:intergenic | 30.0% | |
| TGTATAAGCTGCTAAAAGTA+AGG | + | chr5.4:30337127-30337146 | None:intergenic | 30.0% | |
| TTAATGTTTGGTACAGTTGA+TGG | - | chr5.4:30339458-30339477 | MS.gene032904:intron | 30.0% | |
| TTGATCGATCATATCATTCT+AGG | + | chr5.4:30337304-30337323 | None:intergenic | 30.0% | |
| TTGTTAGGAAATGGGATTTA+AGG | - | chr5.4:30338469-30338488 | MS.gene032904:intron | 30.0% | |
| TTTGTAAAATGGAAGGCAAA+AGG | + | chr5.4:30339195-30339214 | None:intergenic | 30.0% | |
| ! | AAGTGATCTAATTTGCAACT+AGG | + | chr5.4:30337741-30337760 | None:intergenic | 30.0% |
| ! | AATATTCAGCCTTATCAATC+TGG | - | chr5.4:30338772-30338791 | MS.gene032904:intron | 30.0% |
| ! | ACTGATTTCAGAACAATCAT+TGG | - | chr5.4:30338193-30338212 | MS.gene032904:intron | 30.0% |
| ! | AGCATTGGGTTTAATTCAAA+AGG | + | chr5.4:30338664-30338683 | None:intergenic | 30.0% |
| ! | ATATTCAGCCTTATCAATCT+GGG | - | chr5.4:30338773-30338792 | MS.gene032904:intron | 30.0% |
| ! | TGCATGATAATTTAAGACAC+CGG | - | chr5.4:30337507-30337526 | MS.gene032904:intron | 30.0% |
| ! | TGTTTAAGAGTATGTGTTGA+TGG | - | chr5.4:30337570-30337589 | MS.gene032904:CDS | 30.0% |
| !! | ACAGAGTTTTGTAAAATGGA+AGG | + | chr5.4:30339202-30339221 | None:intergenic | 30.0% |
| !! | ATGATTGTTCTGAAATCAGT+AGG | + | chr5.4:30338193-30338212 | None:intergenic | 30.0% |
| !! | GTTTTTGTATTTTGAACAGG+AGG | - | chr5.4:30339912-30339931 | MS.gene032904:CDS | 30.0% |
| !!! | GTTAGTTTTGTTTAGTCTGT+TGG | - | chr5.4:30339781-30339800 | MS.gene032904:intron | 30.0% |
| !!! | GTTGCTTTTGTTCTAAATTC+TGG | - | chr5.4:30339958-30339977 | MS.gene032904:CDS | 30.0% |
| AAAAAAATATGGGGGGAACA+AGG | - | chr5.4:30338539-30338558 | MS.gene032904:intron | 35.0% | |
| AACTTGTGAGATATGTCATC+AGG | - | chr5.4:30337988-30338007 | MS.gene032904:intron | 35.0% | |
| AGATAGTAGGCTAATTAGGT+TGG | + | chr5.4:30339632-30339651 | None:intergenic | 35.0% | |
| ATAGTGGTTTCTTCAGGAAT+AGG | + | chr5.4:30338820-30338839 | None:intergenic | 35.0% | |
| CAGAAGATAGTAGGCTAATT+AGG | + | chr5.4:30339636-30339655 | None:intergenic | 35.0% | |
| CATTTGTTCAGTGTTTGTGT+TGG | - | chr5.4:30339385-30339404 | MS.gene032904:intron | 35.0% | |
| CTGAATATTACATGCACAGA+AGG | + | chr5.4:30338761-30338780 | None:intergenic | 35.0% | |
| CTTACGGAGAAAAAATTGGA+TGG | + | chr5.4:30339543-30339562 | None:intergenic | 35.0% | |
| GCTACTTGACAAAAGGTTAT+AGG | - | chr5.4:30339271-30339290 | MS.gene032904:intron | 35.0% | |
| TAATTTAACACTGACACCTC+AGG | + | chr5.4:30337545-30337564 | None:intergenic | 35.0% | |
| TAGTGGTTTCTTCAGGAATA+GGG | + | chr5.4:30338819-30338838 | None:intergenic | 35.0% | |
| TCACATTGCAAAACCACTTT+AGG | - | chr5.4:30338383-30338402 | MS.gene032904:intron | 35.0% | |
| TCGTAGACTTGTGTGATTTA+TGG | - | chr5.4:30338407-30338426 | MS.gene032904:intron | 35.0% | |
| TGCAATAGAGCTCTTATATG+TGG | + | chr5.4:30338340-30338359 | None:intergenic | 35.0% | |
| TGTGTTGCATTAGTTAGCTA+TGG | - | chr5.4:30338938-30338957 | MS.gene032904:intron | 35.0% | |
| TGTTATGAACTTTCTTGCAG+AGG | - | chr5.4:30339000-30339019 | MS.gene032904:intron | 35.0% | |
| ! | ACCCATTTTCTACATTGATG+TGG | - | chr5.4:30337667-30337686 | MS.gene032904:intron | 35.0% |
| ! | ACCTTGCTATATTATGGCTT+GGG | - | chr5.4:30339691-30339710 | MS.gene032904:intron | 35.0% |
| ! | CTTCCTGATTTTTGAACTGT+TGG | - | chr5.4:30337898-30337917 | MS.gene032904:intron | 35.0% |
| ! | TACCTTGCTATATTATGGCT+TGG | - | chr5.4:30339690-30339709 | MS.gene032904:intron | 35.0% |
| !! | ATATCATTCTAGGGCTTGAT+TGG | + | chr5.4:30337294-30337313 | None:intergenic | 35.0% |
| !! | ATTGTTCTGAAATCAGTAGG+CGG | + | chr5.4:30338190-30338209 | None:intergenic | 35.0% |
| !! | TAATGGCCGATATTTTTGTG+TGG | - | chr5.4:30337428-30337447 | MS.gene032904:intron | 35.0% |
| AAGCTGCATACAATGAGTTC+TGG | - | chr5.4:30339843-30339862 | MS.gene032904:CDS | 40.0% | |
| ACATGCACAGAAGGAAAAAG+AGG | + | chr5.4:30338752-30338771 | None:intergenic | 40.0% | |
| ACTCATCATATTCAGCATCC+AGG | + | chr5.4:30339104-30339123 | None:intergenic | 40.0% | |
| AGCTGCATACAATGAGTTCT+GGG | - | chr5.4:30339844-30339863 | MS.gene032904:CDS | 40.0% | |
| ATGCCAAAGACAAGGACAAT+TGG | + | chr5.4:30338364-30338383 | None:intergenic | 40.0% | |
| GAAAAGCTGCAGAAGATAGT+AGG | + | chr5.4:30339645-30339664 | None:intergenic | 40.0% | |
| GCAGTATACCCAGATTGATA+AGG | + | chr5.4:30338784-30338803 | None:intergenic | 40.0% | |
| GGAAGACAGTGTTTCCAATT+TGG | - | chr5.4:30336853-30336872 | MS.gene032904:intron | 40.0% | |
| GGAGTTGACACAAATGAGAT+CGG | - | chr5.4:30337338-30337357 | MS.gene032904:intron | 40.0% | |
| GTAGCATTTCCCACAACATA+AGG | + | chr5.4:30339256-30339275 | None:intergenic | 40.0% | |
| TATGAACTTTCTTGCAGAGG+AGG | - | chr5.4:30339003-30339022 | MS.gene032904:intron | 40.0% | |
| TATGTGGACACAACATCACA+TGG | + | chr5.4:30338324-30338343 | None:intergenic | 40.0% | |
| TGCATGCCGCAAAAGTAAAA+GGG | + | chr5.4:30339484-30339503 | None:intergenic | 40.0% | |
| TGTCTTCCTCTTGACAGATA+CGG | + | chr5.4:30336841-30336860 | None:intergenic | 40.0% | |
| TTACAATTAGAGCAGCTGAG+CGG | + | chr5.4:30339161-30339180 | None:intergenic | 40.0% | |
| ! | AACAAATGCAGTGAAGCATC+AGG | + | chr5.4:30339373-30339392 | None:intergenic | 40.0% |
| ! | ACAAATGCAGTGAAGCATCA+GGG | + | chr5.4:30339372-30339391 | None:intergenic | 40.0% |
| ! | AGTTGTCTTTTTGTCGGTGA+TGG | - | chr5.4:30338048-30338067 | MS.gene032904:intron | 40.0% |
| ! | GGGAAATGCTACTTGACAAA+AGG | - | chr5.4:30339264-30339283 | MS.gene032904:intron | 40.0% |
| ! | GTTGTCTTTTTGTCGGTGAT+GGG | - | chr5.4:30338049-30338068 | MS.gene032904:intron | 40.0% |
| ! | TATGCTGCTTCTAATGCTAG+TGG | - | chr5.4:30339123-30339142 | MS.gene032904:intron | 40.0% |
| !! | ATTCTAGGGCTTGATTGGAT+TGG | + | chr5.4:30337289-30337308 | None:intergenic | 40.0% |
| !! | GAACACTGACTTGTCTTTGT+CGG | + | chr5.4:30339739-30339758 | None:intergenic | 40.0% |
| !! | TGATGGCCCTTTTACTTTTG+CGG | - | chr5.4:30339475-30339494 | MS.gene032904:intron | 40.0% |
| ACAAGTCTACGAGCCTAAAG+TGG | + | chr5.4:30338399-30338418 | None:intergenic | 45.0% | |
| ACTTGTTCCTGCTGTACTGT+AGG | + | chr5.4:30340030-30340049 | None:intergenic | 45.0% | |
| CACCAGCATCCTTATGTTGT+GGG | - | chr5.4:30339244-30339263 | MS.gene032904:intron | 45.0% | |
| CAGCCAATTGTCCTTGTCTT+TGG | - | chr5.4:30338358-30338377 | MS.gene032904:intron | 45.0% | |
| CATGCACTCTCTGTAACAGA+TGG | - | chr5.4:30339498-30339517 | MS.gene032904:intron | 45.0% | |
| CTTTCTCATTGCACCAATGC+TGG | + | chr5.4:30337961-30337980 | None:intergenic | 45.0% | |
| GCAATGTGATGCCAAAGACA+AGG | + | chr5.4:30338372-30338391 | None:intergenic | 45.0% | |
| GCCCAAGCCATAATATAGCA+AGG | + | chr5.4:30339695-30339714 | None:intergenic | 45.0% | |
| GCTCAGCTGCTCTAATTGTA+AGG | - | chr5.4:30339160-30339179 | MS.gene032904:intron | 45.0% | |
| GGGGGAACAAGGAAATTCTT+AGG | - | chr5.4:30338550-30338569 | MS.gene032904:intron | 45.0% | |
| GTCAAATGCAAGACGAGCAA+TGG | + | chr5.4:30337848-30337867 | None:intergenic | 45.0% | |
| GTCTATGTGTCAGTGTCATC+TGG | + | chr5.4:30337486-30337505 | None:intergenic | 45.0% | |
| GTGCATGCCGCAAAAGTAAA+AGG | + | chr5.4:30339485-30339504 | None:intergenic | 45.0% | |
| GTTGACACAAATGAGATCGG+TGG | - | chr5.4:30337341-30337360 | MS.gene032904:intron | 45.0% | |
| GTTGGTCAACAGGAACAACT+GGG | + | chr5.4:30336682-30336701 | None:intergenic | 45.0% | |
| TAAGACACCGGATACACCTT+CGG | - | chr5.4:30337519-30337538 | MS.gene032904:CDS | 45.0% | |
| TATGCATACGATGCCAACGA+AGG | + | chr5.4:30338140-30338159 | None:intergenic | 45.0% | |
| TGTTGGTCAACAGGAACAAC+TGG | + | chr5.4:30336683-30336702 | None:intergenic | 45.0% | |
| TTCCCACAACATAAGGATGC+TGG | + | chr5.4:30339249-30339268 | None:intergenic | 45.0% | |
| ! | ACAGAAAGTGTGTCCAGCAT+TGG | - | chr5.4:30337945-30337964 | MS.gene032904:intron | 45.0% |
| ! | TGTTTAAGACCCTCCTTCGT+TGG | - | chr5.4:30338124-30338143 | MS.gene032904:intron | 45.0% |
| !! | CAGCATTGGTGCAATGAGAA+AGG | - | chr5.4:30337959-30337978 | MS.gene032904:intron | 45.0% |
| !! | CGTGCAGGCATCTAAGATTT+TGG | - | chr5.4:30338160-30338179 | MS.gene032904:intron | 45.0% |
| !! | TAGGCTAATTAGGTTGGCTC+CGG | + | chr5.4:30339626-30339645 | None:intergenic | 45.0% |
| !! | TTCTGAAATCAGTAGGCGGT+GGG | + | chr5.4:30338186-30338205 | None:intergenic | 45.0% |
| AACTTTCTTGCAGAGGAGGC+TGG | - | chr5.4:30339007-30339026 | MS.gene032904:intron | 50.0% | |
| AATGATCGGAAGGAAGGTGG+TGG | + | chr5.4:30336712-30336731 | None:intergenic | 50.0% | |
| AGAGGAGGCTGGACATTATC+TGG | - | chr5.4:30339018-30339037 | MS.gene032904:intron | 50.0% | |
| AGAGGCAGAACGTCAATTCC+TGG | - | chr5.4:30339083-30339102 | MS.gene032904:intron | 50.0% | |
| AGATACGGCACTCAACCATC+TGG | + | chr5.4:30336826-30336845 | None:intergenic | 50.0% | |
| AGATGGCGATGGGGAATGAT+CGG | + | chr5.4:30336726-30336745 | None:intergenic | 50.0% | |
| ATGATCGGAAGGAAGGTGGT+GGG | + | chr5.4:30336711-30336730 | None:intergenic | 50.0% | |
| ATGGGGAATGATCGGAAGGA+AGG | + | chr5.4:30336718-30336737 | None:intergenic | 50.0% | |
| CACTCAACCATCTGGATCAG+CGG | + | chr5.4:30336818-30336837 | None:intergenic | 50.0% | |
| CATACGATGCCAACGAAGGA+GGG | + | chr5.4:30338136-30338155 | None:intergenic | 50.0% | |
| CTAAATTCTGGGCAGCGTAG+AGG | - | chr5.4:30339970-30339989 | MS.gene032904:CDS | 50.0% | |
| GCACCAGCATCCTTATGTTG+TGG | - | chr5.4:30339243-30339262 | MS.gene032904:intron | 50.0% | |
| GGAACCAGATCCAGATGATC+CGG | + | chr5.4:30336765-30336784 | None:intergenic | 50.0% | |
| GGGGAGTCACAACCTATACA+AGG | + | chr5.4:30337377-30337396 | None:intergenic | 50.0% | |
| GGTTCGCTCTGACCTTGTAT+AGG | - | chr5.4:30337362-30337381 | MS.gene032904:intron | 50.0% | |
| GTTTCTTCAGGAATAGGGCG+AGG | + | chr5.4:30338814-30338833 | None:intergenic | 50.0% | |
| TACCTTGAGACTACCGCTAC+AGG | + | chr5.4:30336891-30336910 | None:intergenic | 50.0% | |
| TCTGCAATCGCCAAAAGTCG+AGG | + | chr5.4:30339066-30339085 | None:intergenic | 50.0% | |
| TGTTTGATTGGGGGCCTGTT+TGG | - | chr5.4:30337084-30337103 | MS.gene032904:intron | 50.0% | |
| ! | ATCATCTGGATCTGGTTCCG+CGG | - | chr5.4:30336766-30336785 | MS.gene032904:intron | 50.0% |
| ! | CTTGCGTGATCCTCGACTTT+TGG | - | chr5.4:30339053-30339072 | MS.gene032904:intron | 50.0% |
| ! | CTTTTCTTGCTTCGAGCTGC+TGG | - | chr5.4:30339659-30339678 | MS.gene032904:intron | 50.0% |
| ! | GACATTATCTGGCTCACCCT+TGG | - | chr5.4:30339029-30339048 | MS.gene032904:intron | 50.0% |
| ! | TCGACTTTTGGCGATTGCAG+AGG | - | chr5.4:30339065-30339084 | MS.gene032904:intron | 50.0% |
| ! | TGAGTGCCGTATCTGTCAAG+AGG | - | chr5.4:30336832-30336851 | MS.gene032904:intron | 50.0% |
| !! | CACTGACTTGTCTTTGTCGG+CGG | + | chr5.4:30339736-30339755 | None:intergenic | 50.0% |
| !! | GTTCTGAAATCAGTAGGCGG+TGG | + | chr5.4:30338187-30338206 | None:intergenic | 50.0% |
| ACTGCTGATGCCGGATCATC+TGG | - | chr5.4:30336752-30336771 | MS.gene032904:intron | 55.0% | |
| AGACTACCGCTACAGGCACA+GGG | + | chr5.4:30336884-30336903 | None:intergenic | 55.0% | |
| AGATGATCCGGCATCAGCAG+TGG | + | chr5.4:30336753-30336772 | None:intergenic | 55.0% | |
| CGAGGATCACGCAAGTCCAA+GGG | + | chr5.4:30339048-30339067 | None:intergenic | 55.0% | |
| CTACACTTCGCCATAGCACC+AGG | - | chr5.4:30339994-30340013 | MS.gene032904:CDS | 55.0% | |
| GAACAACTGGGTGGTCGAGT+TGG | + | chr5.4:30336670-30336689 | None:intergenic | 55.0% | |
| GATGCCGGATCATCTGGATC+TGG | - | chr5.4:30336758-30336777 | MS.gene032904:intron | 55.0% | |
| GATTGGGGGCCTGTTTGGAT+TGG | - | chr5.4:30337089-30337108 | MS.gene032904:intron | 55.0% | |
| GCATACGATGCCAACGAAGG+AGG | + | chr5.4:30338137-30338156 | None:intergenic | 55.0% | |
| GGCACAGGGAGTCTCCAAAT+TGG | + | chr5.4:30336870-30336889 | None:intergenic | 55.0% | |
| GGCATCGTATGCATACGTGC+AGG | - | chr5.4:30338145-30338164 | MS.gene032904:intron | 55.0% | |
| GGGAATGATCGGAAGGAAGG+TGG | + | chr5.4:30336715-30336734 | None:intergenic | 55.0% | |
| GGTCAACAGGAACAACTGGG+TGG | + | chr5.4:30336679-30336698 | None:intergenic | 55.0% | |
| TCCAGGACCTACAGTACAGC+AGG | - | chr5.4:30340020-30340039 | MS.gene032904:CDS | 55.0% | |
| TCCTGCTGTACTGTAGGTCC+TGG | + | chr5.4:30340024-30340043 | None:intergenic | 55.0% | |
| TCGAGGATCACGCAAGTCCA+AGG | + | chr5.4:30339049-30339068 | None:intergenic | 55.0% | |
| TCTTCAGGAATAGGGCGAGG+TGG | + | chr5.4:30338811-30338830 | None:intergenic | 55.0% | |
| TGCCTGTAGCGGTAGTCTCA+AGG | - | chr5.4:30336886-30336905 | MS.gene032904:intron | 55.0% | |
| TGCTGTACTGTAGGTCCTGG+AGG | + | chr5.4:30340021-30340040 | None:intergenic | 55.0% | |
| TGGGCAGGTTGTTGGTCAAC+AGG | + | chr5.4:30336692-30336711 | None:intergenic | 55.0% | |
| ACACTGACACCTCAGGCCGA+AGG | + | chr5.4:30337538-30337557 | None:intergenic | 60.0% | |
| ACTGTAGGTCCTGGAGGTCC+TGG | + | chr5.4:30340015-30340034 | None:intergenic | 60.0% | |
| AGGAATAGGGCGAGGTGGTG+GGG | + | chr5.4:30338806-30338825 | None:intergenic | 60.0% | |
| AGTGGCAGGAGATGGCGATG+GGG | + | chr5.4:30336735-30336754 | None:intergenic | 60.0% | |
| ATCGCCATCACGATCCACCG+CGG | + | chr5.4:30336786-30336805 | None:intergenic | 60.0% | |
| CAGGAATAGGGCGAGGTGGT+GGG | + | chr5.4:30338807-30338826 | None:intergenic | 60.0% | |
| CAGTGGCAGGAGATGGCGAT+GGG | + | chr5.4:30336736-30336755 | None:intergenic | 60.0% | |
| GAGACTACCGCTACAGGCAC+AGG | + | chr5.4:30336885-30336904 | None:intergenic | 60.0% | |
| GAGACTCCCTGTGCCTGTAG+CGG | - | chr5.4:30336875-30336894 | MS.gene032904:intron | 60.0% | |
| GCATCAGCAGTGGCAGGAGA+TGG | + | chr5.4:30336743-30336762 | None:intergenic | 60.0% | |
| GGCGATGGGGAATGATCGGA+AGG | + | chr5.4:30336722-30336741 | None:intergenic | 60.0% | |
| TCAGGAATAGGGCGAGGTGG+TGG | + | chr5.4:30338808-30338827 | None:intergenic | 60.0% | |
| TCTCCTGCCACTGCTGATGC+CGG | - | chr5.4:30336743-30336762 | MS.gene032904:intron | 60.0% | |
| ! | ATCTGGATCTGGTTCCGCGG+TGG | - | chr5.4:30336769-30336788 | MS.gene032904:intron | 60.0% |
| ! | CCTCAGGCCGAAGGTGTATC+CGG | + | chr5.4:30337529-30337548 | None:intergenic | 60.0% |
| ! | GGATCGTGATGGCGATGAGG+AGG | - | chr5.4:30336790-30336809 | MS.gene032904:intron | 60.0% |
| ! | GGTGGATCGTGATGGCGATG+AGG | - | chr5.4:30336787-30336806 | MS.gene032904:intron | 60.0% |
| ! | TCCTGGAGGTCCTGGTGCTA+TGG | + | chr5.4:30340007-30340026 | None:intergenic | 60.0% |
| !! | GAAGGTGGTGGGCAGGTTGT+TGG | + | chr5.4:30336700-30336719 | None:intergenic | 60.0% |
| CCGGATACACCTTCGGCCTG+AGG | - | chr5.4:30337526-30337545 | MS.gene032904:CDS | 65.0% | |
| GATCCGGCATCAGCAGTGGC+AGG | + | chr5.4:30336749-30336768 | None:intergenic | 65.0% | |
| GCAGTGGCAGGAGATGGCGA+TGG | + | chr5.4:30336737-30336756 | None:intergenic | 65.0% | |
| GCCATAGCACCAGGACCTCC+AGG | - | chr5.4:30340003-30340022 | MS.gene032904:CDS | 65.0% | |
| GGAGGAGCCGCTGATCCAGA+TGG | - | chr5.4:30336808-30336827 | MS.gene032904:intron | 65.0% | |
| GGTTCCGCGGTGGATCGTGA+TGG | - | chr5.4:30336779-30336798 | MS.gene032904:intron | 65.0% | |
| !! | TCGGAAGGAAGGTGGTGGGC+AGG | + | chr5.4:30336707-30336726 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 30336638 | 30340053 | 30336638 | ID=MS.gene032904 |
| chr5.4 | mRNA | 30336638 | 30340053 | 30336638 | ID=MS.gene032904.t1;Parent=MS.gene032904 |
| chr5.4 | exon | 30339784 | 30340053 | 30339784 | ID=MS.gene032904.t1.exon1;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30339784 | 30340053 | 30339784 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30338682 | 30338753 | 30338682 | ID=MS.gene032904.t1.exon2;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30338682 | 30338753 | 30338682 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30337843 | 30337910 | 30337843 | ID=MS.gene032904.t1.exon3;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30337843 | 30337910 | 30337843 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30337515 | 30337671 | 30337515 | ID=MS.gene032904.t1.exon4;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30337515 | 30337671 | 30337515 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30337134 | 30337217 | 30337134 | ID=MS.gene032904.t1.exon5;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30337134 | 30337217 | 30337134 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30336943 | 30337032 | 30336943 | ID=MS.gene032904.t1.exon6;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30336943 | 30337032 | 30336943 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| chr5.4 | exon | 30336638 | 30336760 | 30336638 | ID=MS.gene032904.t1.exon7;Parent=MS.gene032904.t1 |
| chr5.4 | CDS | 30336638 | 30336760 | 30336638 | ID=cds.MS.gene032904.t1;Parent=MS.gene032904.t1 |
| Gene Sequence |
| Protein sequence |
