Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070573.t1 | XP_003613768.1 | 94.5 | 291 | 10 | 3 | 1 | 286 | 1 | 290 | 1.10E-136 | 496.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070573.t1 | A0JN69 | 39.1 | 64 | 36 | 1 | 66 | 129 | 71 | 131 | 1.1e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070573.t1 | G7KF80 | 94.5 | 291 | 10 | 3 | 1 | 286 | 1 | 290 | 7.7e-137 | 496.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene070573 | -0.833918 | 4.05E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene070573 | -0.812827 | 3.48E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene070573 | -0.805214 | 1.49E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene070573 | -0.820314 | 7.32E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene070573 | -0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene070573 | 0.850639 | 1.49E-60 | -1.69E-46 |
| MS.gene050438 | MS.gene070573 | -0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene070573 | -0.809384 | 1.94E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene070573 | -0.805233 | 1.47E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene070573 | 0.818372 | 2.03E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene070573 | -0.813258 | 2.80E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene070573 | -0.803847 | 2.87E-49 | -1.69E-46 |
| MS.gene053565 | MS.gene070573 | -0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene070573 | -0.807064 | 6.07E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene070573 | -0.830546 | 2.76E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene070573 | -0.817661 | 2.94E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene070573 | -0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene070573 | -0.830351 | 3.08E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene070573 | -0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene070573 | -0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene070573 | -0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene070573 | -0.809346 | 1.98E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene070573 | -0.812586 | 3.94E-51 | -1.69E-46 |
| MS.gene059896 | MS.gene070573 | 0.834369 | 3.12E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene070573 | 0.831353 | 1.75E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070573 | MS.gene032904 | PPI |
| MS.gene070573 | MS.gene25499 | PPI |
| MS.gene070573 | MS.gene55219 | PPI |
| MS.gene36852 | MS.gene070573 | PPI |
| MS.gene070573 | MS.gene34660 | PPI |
| MS.gene070573 | MS.gene045950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070573.t1 | MTR_5g040650 | 97.251 | 291 | 2 | 3 | 1 | 286 | 1 | 290 | 0.0 | 563 |
| MS.gene070573.t1 | MTR_5g040650 | 96.813 | 251 | 2 | 3 | 1 | 246 | 1 | 250 | 3.96e-175 | 484 |
| MS.gene070573.t1 | MTR_8g467220 | 75.172 | 290 | 63 | 7 | 1 | 286 | 1 | 285 | 2.69e-134 | 381 |
| MS.gene070573.t1 | MTR_1g108490 | 44.681 | 188 | 98 | 4 | 62 | 247 | 55 | 238 | 1.74e-55 | 180 |
| MS.gene070573.t1 | MTR_1g108490 | 44.444 | 162 | 84 | 2 | 62 | 223 | 55 | 210 | 9.18e-47 | 156 |
| MS.gene070573.t1 | MTR_7g082950 | 37.981 | 208 | 118 | 6 | 64 | 269 | 14 | 212 | 3.95e-44 | 149 |
| MS.gene070573.t1 | MTR_7g082950 | 46.377 | 138 | 65 | 4 | 64 | 201 | 14 | 142 | 9.24e-39 | 134 |
| MS.gene070573.t1 | MTR_7g109460 | 40.642 | 187 | 93 | 8 | 66 | 246 | 20 | 194 | 1.14e-37 | 133 |
| MS.gene070573.t1 | MTR_7g109460 | 41.401 | 157 | 75 | 7 | 66 | 217 | 20 | 164 | 1.00e-30 | 113 |
| MS.gene070573.t1 | MTR_1g087150 | 40.571 | 175 | 96 | 5 | 55 | 224 | 9 | 180 | 1.15e-30 | 114 |
| MS.gene070573.t1 | MTR_1g087150 | 40.571 | 175 | 96 | 5 | 55 | 224 | 9 | 180 | 3.05e-30 | 114 |
| MS.gene070573.t1 | MTR_7g010610 | 49.275 | 69 | 35 | 0 | 62 | 130 | 31 | 99 | 1.56e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070573.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 56 | 275 | 33 | 250 | 1.29e-105 | 308 |
| MS.gene070573.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 56 | 275 | 33 | 250 | 1.29e-105 | 308 |
| MS.gene070573.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 56 | 275 | 33 | 250 | 1.29e-105 | 308 |
| MS.gene070573.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 56 | 275 | 33 | 250 | 1.29e-105 | 308 |
| MS.gene070573.t1 | AT2G02960 | 76.471 | 221 | 48 | 3 | 56 | 275 | 33 | 250 | 1.29e-105 | 308 |
| MS.gene070573.t1 | AT3G47550 | 65.157 | 287 | 91 | 5 | 1 | 281 | 1 | 284 | 1.34e-104 | 306 |
| MS.gene070573.t1 | AT3G47550 | 65.157 | 287 | 91 | 5 | 1 | 281 | 1 | 284 | 1.34e-104 | 306 |
| MS.gene070573.t1 | AT1G14260 | 62.879 | 264 | 84 | 5 | 4 | 266 | 5 | 255 | 1.79e-89 | 267 |
| MS.gene070573.t1 | AT1G14260 | 62.879 | 264 | 84 | 5 | 4 | 266 | 5 | 255 | 1.79e-89 | 267 |
| MS.gene070573.t1 | AT1G14260 | 62.879 | 264 | 84 | 5 | 4 | 266 | 5 | 255 | 1.79e-89 | 267 |
| MS.gene070573.t1 | AT5G62460 | 74.561 | 228 | 48 | 4 | 55 | 274 | 80 | 305 | 8.30e-89 | 267 |
| MS.gene070573.t1 | AT5G62460 | 74.123 | 228 | 49 | 4 | 55 | 274 | 67 | 292 | 1.08e-88 | 266 |
| MS.gene070573.t1 | AT5G62460 | 74.123 | 228 | 49 | 4 | 55 | 274 | 67 | 292 | 1.08e-88 | 266 |
| MS.gene070573.t1 | AT3G47550 | 64.609 | 243 | 79 | 4 | 1 | 239 | 1 | 240 | 5.10e-87 | 260 |
| MS.gene070573.t1 | AT3G47550 | 61.086 | 221 | 79 | 4 | 1 | 217 | 1 | 218 | 3.17e-69 | 214 |
| MS.gene070573.t1 | AT2G02960 | 78.082 | 146 | 30 | 1 | 56 | 201 | 33 | 176 | 6.19e-69 | 215 |
| MS.gene070573.t1 | AT2G01275 | 38.934 | 244 | 127 | 7 | 1 | 241 | 1 | 225 | 7.82e-50 | 166 |
| MS.gene070573.t1 | AT2G01275 | 38.934 | 244 | 127 | 7 | 1 | 241 | 1 | 225 | 7.82e-50 | 166 |
| MS.gene070573.t1 | AT2G01275 | 38.934 | 244 | 127 | 7 | 1 | 241 | 1 | 225 | 7.82e-50 | 166 |
| MS.gene070573.t1 | AT2G01275 | 38.934 | 244 | 127 | 7 | 1 | 241 | 27 | 251 | 1.08e-49 | 166 |
| MS.gene070573.t1 | AT2G01275 | 38.934 | 244 | 127 | 7 | 1 | 241 | 27 | 251 | 1.08e-49 | 166 |
| MS.gene070573.t1 | AT5G38070 | 36.694 | 248 | 137 | 6 | 1 | 248 | 1 | 228 | 1.24e-40 | 142 |
| MS.gene070573.t1 | AT4G02075 | 37.629 | 194 | 103 | 4 | 55 | 246 | 9 | 186 | 9.60e-39 | 135 |
| MS.gene070573.t1 | AT4G02075 | 37.629 | 194 | 103 | 4 | 55 | 246 | 9 | 186 | 1.27e-38 | 135 |
| MS.gene070573.t1 | AT1G02610 | 36.066 | 183 | 106 | 4 | 66 | 246 | 20 | 193 | 9.06e-33 | 120 |
| MS.gene070573.t1 | AT1G02610 | 36.066 | 183 | 106 | 4 | 66 | 246 | 20 | 193 | 1.30e-32 | 119 |
| MS.gene070573.t1 | AT4G02075 | 38.596 | 171 | 84 | 5 | 55 | 220 | 9 | 163 | 1.90e-31 | 115 |
Find 91 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGACAGTGTTTCAAATT+TGG | 0.171146 | 5.3:-28467557 | MS.gene070573:CDS |
| GAAGAAACCACTATTGAAAT+AGG | 0.204032 | 5.3:-28465552 | MS.gene070573:CDS |
| GTGCATGCCGCAAAAGTAAA+AGG | 0.236416 | 5.3:+28464934 | None:intergenic |
| CTTGCGTGATCCTCGACTTT+TGG | 0.256892 | 5.3:-28465365 | MS.gene070573:CDS |
| ATAGTGGTTTCTTCAGGAAT+AGG | 0.347604 | 5.3:+28465561 | None:intergenic |
| AATATTCAGCCTTATCAATC+TGG | 0.348621 | 5.3:-28465606 | MS.gene070573:intron |
| ATTTCAATAGTGGTTTCTTC+AGG | 0.350976 | 5.3:+28465555 | None:intergenic |
| ATCTTACCCTATTTCAATAG+TGG | 0.355747 | 5.3:+28465545 | None:intergenic |
| ACTGCTGATGCCGGATCATC+TGG | 0.359419 | 5.3:-28467658 | MS.gene070573:CDS |
| AGAGGAGGCTGGACATTATC+TGG | 0.364653 | 5.3:-28465400 | MS.gene070573:CDS |
| TACCTTGCTATATTATGGCT+TGG | 0.367363 | 5.3:-28464726 | MS.gene070573:CDS |
| TCAGGAATAGGGCGAGGTGG+TGG | 0.373410 | 5.3:+28465573 | None:intergenic |
| ACCTTGCTATATTATGGCTT+GGG | 0.376940 | 5.3:-28464725 | MS.gene070573:CDS |
| GGTTGTTGGTCAGGAACAAC+TGG | 0.382007 | 5.3:+28467727 | None:intergenic |
| GACATTATCTGGCTCGCCCT+TGG | 0.395641 | 5.3:-28465389 | MS.gene070573:CDS |
| TAGTGGTTTCTTCAGGAATA+GGG | 0.397798 | 5.3:+28465562 | None:intergenic |
| CTTTCTCATTGCACCAATGC+TGG | 0.404082 | 5.3:+28466414 | None:intergenic |
| TGGTGGGCAGGTTGTTGGTC+AGG | 0.404240 | 5.3:+28467718 | None:intergenic |
| GAAGGTGGTGGGCAGGTTGT+TGG | 0.414952 | 5.3:+28467713 | None:intergenic |
| AACTTTCTTGCAGAGGAGGC+TGG | 0.424560 | 5.3:-28465411 | MS.gene070573:intron |
| AGAGGCAGAACGTCAATTCC+TGG | 0.431011 | 5.3:-28465335 | MS.gene070573:CDS |
| AAGAAACCACTATTGAAATA+GGG | 0.437347 | 5.3:-28465551 | MS.gene070573:intron |
| ACTGTAGGTCCTGGAGGTCC+TGG | 0.440890 | 5.3:+28464403 | None:intergenic |
| TCTCCTGCCACTGCTGATGC+CGG | 0.451697 | 5.3:-28467667 | MS.gene070573:CDS |
| AATGATCGGAAGGAAGGTGG+TGG | 0.456132 | 5.3:+28467701 | None:intergenic |
| ACTACCAAGTGATCGCTCAT+TGG | 0.456166 | 5.3:+28467772 | None:intergenic |
| CAGGAATAGGGCGAGGTGGT+GGG | 0.456864 | 5.3:+28465574 | None:intergenic |
| GAACACTGACTTGTCTTTGT+CGG | 0.478778 | 5.3:+28464680 | None:intergenic |
| AATTTAGAACAAAAGCAACT+TGG | 0.479789 | 5.3:+28464461 | None:intergenic |
| TCCTGCTGTACTGTAGGTCC+TGG | 0.480306 | 5.3:+28464394 | None:intergenic |
| AGATACGGCACTCAACCATC+TGG | 0.480714 | 5.3:+28467587 | None:intergenic |
| GGTTGAGTGCCGTATCTGTC+AGG | 0.494067 | 5.3:-28467581 | MS.gene070573:CDS |
| TCCTGGAGGTCCTGGTGCTA+TGG | 0.494451 | 5.3:+28464411 | None:intergenic |
| CAGTGGCAGGAGATGGCGAT+GGG | 0.494476 | 5.3:+28467677 | None:intergenic |
| GATGCCGGATCATCTGGATC+TGG | 0.496615 | 5.3:-28467652 | MS.gene070573:CDS |
| TCGGAAGGAAGGTGGTGGGC+AGG | 0.502664 | 5.3:+28467706 | None:intergenic |
| GAGACTACCGCTACAGGCAC+AGG | 0.503593 | 5.3:+28467528 | None:intergenic |
| AACTTGTGAGATATGTCATC+AGG | 0.505014 | 5.3:-28466384 | MS.gene070573:intron |
| TACCTTGAGACTACCGCTAC+AGG | 0.507838 | 5.3:+28467522 | None:intergenic |
| CAGCATTGGTGCAATGAGAA+AGG | 0.519925 | 5.3:-28466413 | MS.gene070573:CDS |
| ATTTAGAACAAAAGCAACTT+GGG | 0.519948 | 5.3:+28464462 | None:intergenic |
| GCCATAGCACCAGGACCTCC+AGG | 0.524360 | 5.3:-28464412 | MS.gene070573:CDS |
| GGAACCAGATCCAGATGATC+CGG | 0.527244 | 5.3:+28467648 | None:intergenic |
| TCGAGGATCACGCAAGTCCA+AGG | 0.529030 | 5.3:+28465372 | None:intergenic |
| GATCCGGCATCAGCAGTGGC+AGG | 0.529047 | 5.3:+28467664 | None:intergenic |
| GCATCAGCAGTGGCAGGAGA+TGG | 0.530163 | 5.3:+28467670 | None:intergenic |
| GGGAATGATCGGAAGGAAGG+TGG | 0.530407 | 5.3:+28467698 | None:intergenic |
| TCCAGGACCTACAGTACAGC+AGG | 0.533517 | 5.3:-28464395 | MS.gene070573:CDS |
| ACAGAAAGTGTGTCCAGCAT+TGG | 0.533571 | 5.3:-28466427 | MS.gene070573:CDS |
| ACTTGTTCCTGCTGTACTGT+AGG | 0.533667 | 5.3:+28464388 | None:intergenic |
| GAACAACTGGGTGGTCGAGT+TGG | 0.537838 | 5.3:+28467740 | None:intergenic |
| TTTCCCAATGAGCGATCACT+TGG | 0.540113 | 5.3:-28467776 | None:intergenic |
| GCAGTATACCCAGATTGATA+AGG | 0.540164 | 5.3:+28465597 | None:intergenic |
| TGCATGCCGCAAAAGTAAAA+GGG | 0.544452 | 5.3:+28464935 | None:intergenic |
| GCAGTGGCAGGAGATGGCGA+TGG | 0.545980 | 5.3:+28467676 | None:intergenic |
| ATGGGGAATGATCGGAAGGA+AGG | 0.548616 | 5.3:+28467695 | None:intergenic |
| CTACACTTCGCCATAGCACC+AGG | 0.550759 | 5.3:-28464421 | MS.gene070573:CDS |
| ATATTCAGCCTTATCAATCT+GGG | 0.551118 | 5.3:-28465605 | MS.gene070573:intron |
| ACTCATCATATTCAGCATCC+AGG | 0.551789 | 5.3:+28465317 | None:intergenic |
| AGATGGCGATGGGGAATGAT+CGG | 0.552402 | 5.3:+28467687 | None:intergenic |
| TGCTGTACTGTAGGTCCTGG+AGG | 0.564156 | 5.3:+28464397 | None:intergenic |
| AGGAATAGGGCGAGGTGGTG+GGG | 0.566322 | 5.3:+28465575 | None:intergenic |
| TGTCTTCCTCCTGACAGATA+CGG | 0.567028 | 5.3:+28467572 | None:intergenic |
| TGCCTGTAGCGGTAGTCTCA+AGG | 0.574911 | 5.3:-28467524 | MS.gene070573:intron |
| GTTTCTTCAGGAATAGGGCG+AGG | 0.582205 | 5.3:+28465567 | None:intergenic |
| GGCGATGGGGAATGATCGGA+AGG | 0.583505 | 5.3:+28467691 | None:intergenic |
| ATCTGGATCTGGTTCCGCGG+TGG | 0.583717 | 5.3:-28467641 | MS.gene070573:CDS |
| CACTCAACCATCTGGATCAG+TGG | 0.593877 | 5.3:+28467595 | None:intergenic |
| CATGCACTCTCTGTAACAGA+TGG | 0.596020 | 5.3:-28464918 | MS.gene070573:CDS |
| ATGATCGGAAGGAAGGTGGT+GGG | 0.601522 | 5.3:+28467702 | None:intergenic |
| TATGCTGCTTCTAATGCTAG+TGG | 0.606341 | 5.3:-28465295 | MS.gene070573:CDS |
| CTAAATTCTGGGCAGCGTAG+AGG | 0.608192 | 5.3:-28464445 | MS.gene070573:CDS |
| GGTTCCGCGGTGGATCGTGA+TGG | 0.608708 | 5.3:-28467631 | MS.gene070573:CDS |
| CACTGACTTGTCTTTGTCGG+CGG | 0.613302 | 5.3:+28464683 | None:intergenic |
| GGATCGTGATGGCGATGAGG+AGG | 0.616205 | 5.3:-28467620 | MS.gene070573:CDS |
| GCCCAAGCCATAATATAGCA+AGG | 0.617032 | 5.3:+28464724 | None:intergenic |
| CGAGGATCACGCAAGTCCAA+GGG | 0.621916 | 5.3:+28465373 | None:intergenic |
| AGATGATCCGGCATCAGCAG+TGG | 0.627660 | 5.3:+28467660 | None:intergenic |
| AGACTACCGCTACAGGCACA+GGG | 0.636998 | 5.3:+28467529 | None:intergenic |
| GAGACTCCCTGTGCCTGTAG+CGG | 0.639323 | 5.3:-28467535 | MS.gene070573:CDS |
| TCTTCAGGAATAGGGCGAGG+TGG | 0.642080 | 5.3:+28465570 | None:intergenic |
| TCTGCAATCGCCAAAAGTCG+AGG | 0.642761 | 5.3:+28465355 | None:intergenic |
| ATCATCTGGATCTGGTTCCG+CGG | 0.646013 | 5.3:-28467644 | MS.gene070573:CDS |
| GGAGGAGCCACTGATCCAGA+TGG | 0.656675 | 5.3:-28467602 | MS.gene070573:CDS |
| GGTGGATCGTGATGGCGATG+AGG | 0.679783 | 5.3:-28467623 | MS.gene070573:CDS |
| TGAGTGCCGTATCTGTCAGG+AGG | 0.681591 | 5.3:-28467578 | MS.gene070573:CDS |
| GTTGTTGGTCAGGAACAACT+GGG | 0.683593 | 5.3:+28467728 | None:intergenic |
| AGTGGCAGGAGATGGCGATG+GGG | 0.704357 | 5.3:+28467678 | None:intergenic |
| ATCGCCATCACGATCCACCG+CGG | 0.714224 | 5.3:+28467627 | None:intergenic |
| GTTGGTCAGGAACAACTGGG+TGG | 0.729451 | 5.3:+28467731 | None:intergenic |
| TTACAATTAGAGCAGCTGAG+CGG | 0.741254 | 5.3:+28465260 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAACAAAATAATATAATT+AGG | + | chr5.3:28466491-28466510 | None:intergenic | 10.0% |
| !! | TTCATAAAAAATGTGAATAA+TGG | - | chr5.3:28465144-28465163 | MS.gene070573:intron | 15.0% |
| !! | TTTGTCTATGAAAAAAATAT+GGG | - | chr5.3:28466310-28466329 | MS.gene070573:intron | 15.0% |
| !!! | CGTTATTTTTAAATTTTTGT+AGG | - | chr5.3:28464679-28464698 | MS.gene070573:intron | 15.0% |
| !!! | GGATTTGTTTTTTTTTTTTA+TGG | - | chr5.3:28464700-28464719 | MS.gene070573:CDS | 15.0% |
| !!! | TTTTGTCTATGAAAAAAATA+TGG | - | chr5.3:28466309-28466328 | MS.gene070573:intron | 15.0% |
| !! | AAAATTCCACACAAAAATAT+CGG | + | chr5.3:28465170-28465189 | None:intergenic | 20.0% |
| !! | AAAGTTGAGAATTACAAAAA+AGG | - | chr5.3:28465598-28465617 | MS.gene070573:CDS | 20.0% |
| !! | AAGTCATGTATATAACATAT+AGG | - | chr5.3:28466044-28466063 | MS.gene070573:intron | 20.0% |
| !! | AAGTTGAGAATTACAAAAAA+GGG | - | chr5.3:28465599-28465618 | MS.gene070573:CDS | 20.0% |
| !! | ACATAAATCAATATAACAGT+CGG | + | chr5.3:28467338-28467357 | None:intergenic | 20.0% |
| !! | ACATAAATGATATTAAGCAT+TGG | + | chr5.3:28466460-28466479 | None:intergenic | 20.0% |
| !! | ATATGTTATATACATGACTT+GGG | + | chr5.3:28466044-28466063 | None:intergenic | 20.0% |
| !! | ATCAATAATCATGTATGATT+AGG | - | chr5.3:28464806-28464825 | MS.gene070573:intron | 20.0% |
| !! | CATAAATGATATTAAGCATT+GGG | + | chr5.3:28466459-28466478 | None:intergenic | 20.0% |
| !! | GTACCAAACAATAAAAAATT+GGG | + | chr5.3:28467189-28467208 | None:intergenic | 20.0% |
| !! | TATATGTTATATACATGACT+TGG | + | chr5.3:28466045-28466064 | None:intergenic | 20.0% |
| !! | TATGAAGCTAATTCAAATTA+GGG | + | chr5.3:28465130-28465149 | None:intergenic | 20.0% |
| !! | TCAATAATCATGTATGATTA+GGG | - | chr5.3:28464807-28464826 | MS.gene070573:intron | 20.0% |
| !! | TGTACCAAACAATAAAAAAT+TGG | + | chr5.3:28467190-28467209 | None:intergenic | 20.0% |
| !! | TTACAAAACTGTGTATAATT+TGG | - | chr5.3:28466941-28466960 | MS.gene070573:intron | 20.0% |
| !! | TTATGAAGCTAATTCAAATT+AGG | + | chr5.3:28465131-28465150 | None:intergenic | 20.0% |
| !! | TTGTCTATGAAAAAAATATG+GGG | - | chr5.3:28466311-28466330 | MS.gene070573:intron | 20.0% |
| !!! | ATGTGAATGTTTTTTTAAAG+TGG | - | chr5.3:28465858-28465877 | MS.gene070573:intron | 20.0% |
| !!! | TAACCCAATTTTTTATTGTT+TGG | - | chr5.3:28467183-28467202 | MS.gene070573:intron | 20.0% |
| !!! | TTATACACAGTTTTGTAAAA+TGG | + | chr5.3:28466939-28466958 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTGTTAGGAAAT+GGG | - | chr5.3:28466242-28466261 | MS.gene070573:intron | 20.0% |
| !!! | TTTTCAATTTTGTTAGGAAA+TGG | - | chr5.3:28466241-28466260 | MS.gene070573:intron | 20.0% |
| ! | AAAGCTCTATTGTTAGTAAA+AGG | + | chr5.3:28466004-28466023 | None:intergenic | 25.0% |
| ! | AAGAAACCACTATTGAAATA+GGG | - | chr5.3:28466602-28466621 | MS.gene070573:intron | 25.0% |
| ! | AAGCAAAAAACAATTTCTCA+CGG | + | chr5.3:28465519-28465538 | None:intergenic | 25.0% |
| ! | ATGAAGCTAATTCAAATTAG+GGG | + | chr5.3:28465129-28465148 | None:intergenic | 25.0% |
| ! | CAATAATCATGTATGATTAG+GGG | - | chr5.3:28464808-28464827 | MS.gene070573:intron | 25.0% |
| ! | CACAACTAAATTATACTTCA+AGG | - | chr5.3:28466360-28466379 | MS.gene070573:intron | 25.0% |
| ! | GAGTTTATGAAATATTGTGT+TGG | - | chr5.3:28465425-28465444 | MS.gene070573:intron | 25.0% |
| ! | TCCTAACAAAATTGAAAATC+AGG | + | chr5.3:28466239-28466258 | None:intergenic | 25.0% |
| ! | TGATCGATCAATTTGAAAAA+TGG | - | chr5.3:28465046-28465065 | MS.gene070573:intron | 25.0% |
| ! | TGTCTATGAAAAAAATATGG+GGG | - | chr5.3:28466312-28466331 | MS.gene070573:intron | 25.0% |
| !! | AATTTAGAACAAAAGCAACT+TGG | + | chr5.3:28467695-28467714 | None:intergenic | 25.0% |
| !! | ATTTAGAACAAAAGCAACTT+GGG | + | chr5.3:28467694-28467713 | None:intergenic | 25.0% |
| !! | ATTTTTGAACTGTTGGTATT+TGG | - | chr5.3:28465686-28465705 | MS.gene070573:intron | 25.0% |
| !! | CTAATAAGTTGTCTTTTTGT+CGG | - | chr5.3:28465823-28465842 | MS.gene070573:intron | 25.0% |
| !! | TCCTGATTTTCAATTTTGTT+AGG | - | chr5.3:28466235-28466254 | MS.gene070573:intron | 25.0% |
| !! | TTGTAACTTTGTATTTTGTG+TGG | - | chr5.3:28466408-28466427 | MS.gene070573:CDS | 25.0% |
| !!! | CTGTTTTTTGTATTTTGAAC+AGG | - | chr5.3:28467647-28467666 | MS.gene070573:CDS | 25.0% |
| !!! | GTTATATTGATTTATGTGAC+CGG | - | chr5.3:28467341-28467360 | MS.gene070573:intron | 25.0% |
| !!! | TCTTTTACCTTGCTATATTA+TGG | - | chr5.3:28467422-28467441 | MS.gene070573:intron | 25.0% |
| !!! | TTGCTTTTGTTCTAAATTCT+GGG | - | chr5.3:28467697-28467716 | MS.gene070573:CDS | 25.0% |
| !!! | TTTTTTGTATTTTGAACAGG+AGG | - | chr5.3:28467650-28467669 | MS.gene070573:CDS | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | + | chr5.3:28464834-28464853 | None:intergenic | 30.0% | |
| AGCAAAAAACAATTTCTCAC+GGG | + | chr5.3:28465518-28465537 | None:intergenic | 30.0% | |
| ATACCAACAGTTCAAAAATC+AGG | + | chr5.3:28465685-28465704 | None:intergenic | 30.0% | |
| ATAGAGACTCAAATCACTTA+CGG | + | chr5.3:28467296-28467315 | None:intergenic | 30.0% | |
| ATCACTTACGGAGAAAAAAT+TGG | + | chr5.3:28467284-28467303 | None:intergenic | 30.0% | |
| ATCCACATCAATGTAGAAAA+CGG | + | chr5.3:28465405-28465424 | None:intergenic | 30.0% | |
| ATCTTACCCTATTTCAATAG+TGG | + | chr5.3:28466611-28466630 | None:intergenic | 30.0% | |
| ATTTCAATAGTGGTTTCTTC+AGG | + | chr5.3:28466601-28466620 | None:intergenic | 30.0% | |
| CGACAAAAAGACAACTTATT+AGG | + | chr5.3:28465825-28465844 | None:intergenic | 30.0% | |
| CGATCAATTTGAAAAATGGT+TGG | - | chr5.3:28465050-28465069 | MS.gene070573:intron | 30.0% | |
| GAAGAAACCACTATTGAAAT+AGG | - | chr5.3:28466601-28466620 | MS.gene070573:intron | 30.0% | |
| GCAGCTTATACAAATAAGTA+AGG | - | chr5.3:28464868-28464887 | MS.gene070573:intron | 30.0% | |
| GCTAAAAATTGTCAAGCTAT+TGG | - | chr5.3:28467026-28467045 | MS.gene070573:intron | 30.0% | |
| GTCTATGAAAAAAATATGGG+GGG | - | chr5.3:28466313-28466332 | MS.gene070573:intron | 30.0% | |
| TAATTTAACACTAACACCTC+AGG | + | chr5.3:28465278-28465297 | None:intergenic | 30.0% | |
| TATCATTCATAAGCTTGTCA+AGG | - | chr5.3:28464898-28464917 | MS.gene070573:CDS | 30.0% | |
| TCACATTTCAAAACCACTTT+AGG | - | chr5.3:28466164-28466183 | MS.gene070573:intron | 30.0% | |
| TGATCGATCATATCATTCTA+GGG | + | chr5.3:28465036-28465055 | None:intergenic | 30.0% | |
| TGTATAAGCTGCTAAAAGTA+AGG | + | chr5.3:28464860-28464879 | None:intergenic | 30.0% | |
| TTATTGTTTGGTACAGTTGA+TGG | - | chr5.3:28467195-28467214 | MS.gene070573:intron | 30.0% | |
| TTGAGAATTACAAAAAAGGG+TGG | - | chr5.3:28465602-28465621 | MS.gene070573:intron | 30.0% | |
| TTGATCGATCATATCATTCT+AGG | + | chr5.3:28465037-28465056 | None:intergenic | 30.0% | |
| TTGTAGACTTGTGTGATTTA+TGG | - | chr5.3:28466188-28466207 | MS.gene070573:intron | 30.0% | |
| TTGTTAGGAAATGGGATTTA+AGG | - | chr5.3:28466250-28466269 | MS.gene070573:intron | 30.0% | |
| ! | AAGTGATCTAATTTGCAACT+AGG | + | chr5.3:28465474-28465493 | None:intergenic | 30.0% |
| ! | AATATTCAGCCTTATCAATC+TGG | - | chr5.3:28466547-28466566 | MS.gene070573:intron | 30.0% |
| ! | ACTGATTTCAGAACAATCAT+TGG | - | chr5.3:28465974-28465993 | MS.gene070573:intron | 30.0% |
| ! | AGCATTGGGTTTAATTCAAA+AGG | + | chr5.3:28466445-28466464 | None:intergenic | 30.0% |
| ! | ATATTCAGCCTTATCAATCT+GGG | - | chr5.3:28466548-28466567 | MS.gene070573:intron | 30.0% |
| ! | TGTTTAAGAGTATGTGTTGA+TGG | - | chr5.3:28465303-28465322 | MS.gene070573:CDS | 30.0% |
| !! | ACACAGTTTTGTAAAATGGA+AGG | + | chr5.3:28466935-28466954 | None:intergenic | 30.0% |
| !! | ATGATTGTTCTGAAATCAGT+AGG | + | chr5.3:28465974-28465993 | None:intergenic | 30.0% |
| !!! | GTTAGTTTTGTTTAGTCTGT+TGG | - | chr5.3:28467518-28467537 | MS.gene070573:intron | 30.0% |
| !!! | GTTGCTTTTGTTCTAAATTC+TGG | - | chr5.3:28467696-28467715 | MS.gene070573:CDS | 30.0% |
| AAAAAAATATGGGGGGAACA+AGG | - | chr5.3:28466320-28466339 | MS.gene070573:intron | 35.0% | |
| AACTTGTGAGATATGTCATC+AGG | - | chr5.3:28465769-28465788 | MS.gene070573:intron | 35.0% | |
| ACAAGTCTACAAACCTAAAG+TGG | + | chr5.3:28466180-28466199 | None:intergenic | 35.0% | |
| ACATGCACAGAAGAAAAAAG+AGG | + | chr5.3:28466527-28466546 | None:intergenic | 35.0% | |
| AGATAGTAGGCTAATTAGGT+TGG | + | chr5.3:28467369-28467388 | None:intergenic | 35.0% | |
| ATAGTGGTTTCTTCAGGAAT+AGG | + | chr5.3:28466595-28466614 | None:intergenic | 35.0% | |
| CAGAAGATAGTAGGCTAATT+AGG | + | chr5.3:28467373-28467392 | None:intergenic | 35.0% | |
| CATTTGTTCAGTGTTTGTGT+TGG | - | chr5.3:28467122-28467141 | MS.gene070573:intron | 35.0% | |
| CTTACGGAGAAAAAATTGGA+TGG | + | chr5.3:28467280-28467299 | None:intergenic | 35.0% | |
| GGAAGACAGTGTTTCAAATT+TGG | - | chr5.3:28464596-28464615 | MS.gene070573:intron | 35.0% | |
| TACAGCAGTGTAACATATGT+TGG | - | chr5.3:28466068-28466087 | MS.gene070573:intron | 35.0% | |
| TAGTGGTTTCTTCAGGAATA+GGG | + | chr5.3:28466594-28466613 | None:intergenic | 35.0% | |
| TCCACATCAATGTAGAAAAC+GGG | + | chr5.3:28465404-28465423 | None:intergenic | 35.0% | |
| TGCAATAGAGCTCTTATATG+TGG | + | chr5.3:28466121-28466140 | None:intergenic | 35.0% | |
| TGTGTTGCATTAGTTAGCTA+TGG | - | chr5.3:28466673-28466692 | MS.gene070573:intron | 35.0% | |
| TGTTATGAACTTTCTTGCAG+AGG | - | chr5.3:28466735-28466754 | MS.gene070573:intron | 35.0% | |
| TTTCAGCTAAAAACGAGCAA+TGG | + | chr5.3:28465581-28465600 | None:intergenic | 35.0% | |
| ! | ACCTTGCTATATTATGGCTT+GGG | - | chr5.3:28467428-28467447 | MS.gene070573:intron | 35.0% |
| ! | CTTCCTGATTTTTGAACTGT+TGG | - | chr5.3:28465679-28465698 | MS.gene070573:intron | 35.0% |
| ! | GTTTTGTAAAATGGAAGGCA+AGG | + | chr5.3:28466930-28466949 | None:intergenic | 35.0% |
| ! | TACCTTGCTATATTATGGCT+TGG | - | chr5.3:28467427-28467446 | MS.gene070573:intron | 35.0% |
| ! | TTAGCCTATAACCTTTTGTC+AGG | + | chr5.3:28467011-28467030 | None:intergenic | 35.0% |
| !! | ATATCATTCTAGGGCTTGAT+TGG | + | chr5.3:28465027-28465046 | None:intergenic | 35.0% |
| !! | ATTGTTCTGAAATCAGTAGG+CGG | + | chr5.3:28465971-28465990 | None:intergenic | 35.0% |
| !! | TAATGGCCGATATTTTTGTG+TGG | - | chr5.3:28465161-28465180 | MS.gene070573:intron | 35.0% |
| AAGCTGCATACAATGAGTTC+TGG | - | chr5.3:28467580-28467599 | MS.gene070573:CDS | 40.0% | |
| ACTCATCATATTCAGCATCC+AGG | + | chr5.3:28466839-28466858 | None:intergenic | 40.0% | |
| AGCTGCATACAATGAGTTCT+GGG | - | chr5.3:28467581-28467600 | MS.gene070573:CDS | 40.0% | |
| ATGCCAAAGACAAGGACAAT+TGG | + | chr5.3:28466145-28466164 | None:intergenic | 40.0% | |
| GAAAAGCTGCAGAAGATAGT+AGG | + | chr5.3:28467382-28467401 | None:intergenic | 40.0% | |
| GAAATGTGATGCCAAAGACA+AGG | + | chr5.3:28466153-28466172 | None:intergenic | 40.0% | |
| GCAGTATACCCAGATTGATA+AGG | + | chr5.3:28466559-28466578 | None:intergenic | 40.0% | |
| GCTACCTGACAAAAGGTTAT+AGG | - | chr5.3:28467004-28467023 | MS.gene070573:intron | 40.0% | |
| GGAGTTGACACAAATGAGAT+CGG | - | chr5.3:28465071-28465090 | MS.gene070573:intron | 40.0% | |
| GTAGCATTTCCCACAACATA+AGG | + | chr5.3:28466989-28467008 | None:intergenic | 40.0% | |
| TAAGACACCAGATACACCTT+CGG | - | chr5.3:28465252-28465271 | MS.gene070573:intron | 40.0% | |
| TATGAACTTTCTTGCAGAGG+AGG | - | chr5.3:28466738-28466757 | MS.gene070573:intron | 40.0% | |
| TATGTGGACACAACATCACA+TGG | + | chr5.3:28466105-28466124 | None:intergenic | 40.0% | |
| TGCATGCCGCAAAAGTAAAA+GGG | + | chr5.3:28467221-28467240 | None:intergenic | 40.0% | |
| TTACAATTAGAGCAGCTGAG+CGG | + | chr5.3:28466896-28466915 | None:intergenic | 40.0% | |
| ! | AACAAATGCAGTGAAGCATC+AGG | + | chr5.3:28467110-28467129 | None:intergenic | 40.0% |
| ! | ACAAATGCAGTGAAGCATCA+GGG | + | chr5.3:28467109-28467128 | None:intergenic | 40.0% |
| ! | ACCCGTTTTCTACATTGATG+TGG | - | chr5.3:28465400-28465419 | MS.gene070573:CDS | 40.0% |
| ! | AGTTGTCTTTTTGTCGGTGA+TGG | - | chr5.3:28465829-28465848 | MS.gene070573:intron | 40.0% |
| ! | GTTGTCTTTTTGTCGGTGAT+GGG | - | chr5.3:28465830-28465849 | MS.gene070573:intron | 40.0% |
| ! | TATGCTGCTTCTAATGCTAG+TGG | - | chr5.3:28466858-28466877 | MS.gene070573:intron | 40.0% |
| !! | ATTCTAGGGCTTGATTGGAT+TGG | + | chr5.3:28465022-28465041 | None:intergenic | 40.0% |
| !! | GAACACTGACTTGTCTTTGT+CGG | + | chr5.3:28467476-28467495 | None:intergenic | 40.0% |
| !! | TGATGGCCCTTTTACTTTTG+CGG | - | chr5.3:28467212-28467231 | MS.gene070573:intron | 40.0% |
| ACTTGTTCCTGCTGTACTGT+AGG | + | chr5.3:28467768-28467787 | None:intergenic | 45.0% | |
| CACCAGCATCCTTATGTTGT+GGG | - | chr5.3:28466977-28466996 | MS.gene070573:intron | 45.0% | |
| CAGCCAATTGTCCTTGTCTT+TGG | - | chr5.3:28466139-28466158 | MS.gene070573:intron | 45.0% | |
| CATGCACTCTCTGTAACAGA+TGG | - | chr5.3:28467235-28467254 | MS.gene070573:intron | 45.0% | |
| CTTTCTCATTGCACCAATGC+TGG | + | chr5.3:28465742-28465761 | None:intergenic | 45.0% | |
| GCCCAAGCCATAATATAGCA+AGG | + | chr5.3:28467432-28467451 | None:intergenic | 45.0% | |
| GCTCAGCTGCTCTAATTGTA+AGG | - | chr5.3:28466895-28466914 | MS.gene070573:intron | 45.0% | |
| GGGAAATGCTACCTGACAAA+AGG | - | chr5.3:28466997-28467016 | MS.gene070573:intron | 45.0% | |
| GGGGGAACAAGGAAATTCTT+AGG | - | chr5.3:28466331-28466350 | MS.gene070573:intron | 45.0% | |
| GTCTATGTGTCAGTGTCATC+TGG | + | chr5.3:28465219-28465238 | None:intergenic | 45.0% | |
| GTGCATGCCGCAAAAGTAAA+AGG | + | chr5.3:28467222-28467241 | None:intergenic | 45.0% | |
| GTTGACACAAATGAGATCGG+TGG | - | chr5.3:28465074-28465093 | MS.gene070573:intron | 45.0% | |
| GTTGTTGGTCAGGAACAACT+GGG | + | chr5.3:28464428-28464447 | None:intergenic | 45.0% | |
| TATGCATACGATGCCAAGGA+AGG | + | chr5.3:28465921-28465940 | None:intergenic | 45.0% | |
| TGTATGATTAGGGGCCTGTT+TGG | - | chr5.3:28464817-28464836 | MS.gene070573:intron | 45.0% | |
| TGTCTTCCTCCTGACAGATA+CGG | + | chr5.3:28464584-28464603 | None:intergenic | 45.0% | |
| TTCCCACAACATAAGGATGC+TGG | + | chr5.3:28466982-28467001 | None:intergenic | 45.0% | |
| ! | ACAGAAAGTGTGTCCAGCAT+TGG | - | chr5.3:28465726-28465745 | MS.gene070573:intron | 45.0% |
| ! | CGTGCAGGCATCTAAGTTTT+TGG | - | chr5.3:28465941-28465960 | MS.gene070573:intron | 45.0% |
| ! | TGTTTAAGACCCTCCTTCCT+TGG | - | chr5.3:28465905-28465924 | MS.gene070573:intron | 45.0% |
| !! | CAGCATTGGTGCAATGAGAA+AGG | - | chr5.3:28465740-28465759 | MS.gene070573:intron | 45.0% |
| !! | TAGGCTAATTAGGTTGGCTC+CGG | + | chr5.3:28467363-28467382 | None:intergenic | 45.0% |
| !! | TTCTGAAATCAGTAGGCGGT+GGG | + | chr5.3:28465967-28465986 | None:intergenic | 45.0% |
| AACTTTCTTGCAGAGGAGGC+TGG | - | chr5.3:28466742-28466761 | MS.gene070573:intron | 50.0% | |
| AATGATCGGAAGGAAGGTGG+TGG | + | chr5.3:28464455-28464474 | None:intergenic | 50.0% | |
| AGAGGAGGCTGGACATTATC+TGG | - | chr5.3:28466753-28466772 | MS.gene070573:intron | 50.0% | |
| AGAGGCAGAACGTCAATTCC+TGG | - | chr5.3:28466818-28466837 | MS.gene070573:intron | 50.0% | |
| AGATACGGCACTCAACCATC+TGG | + | chr5.3:28464569-28464588 | None:intergenic | 50.0% | |
| AGATGGCGATGGGGAATGAT+CGG | + | chr5.3:28464469-28464488 | None:intergenic | 50.0% | |
| ATGATCGGAAGGAAGGTGGT+GGG | + | chr5.3:28464454-28464473 | None:intergenic | 50.0% | |
| ATGGGGAATGATCGGAAGGA+AGG | + | chr5.3:28464461-28464480 | None:intergenic | 50.0% | |
| CACGTATGCATACGATGCCA+AGG | + | chr5.3:28465925-28465944 | None:intergenic | 50.0% | |
| CACTCAACCATCTGGATCAG+TGG | + | chr5.3:28464561-28464580 | None:intergenic | 50.0% | |
| CATACGATGCCAAGGAAGGA+GGG | + | chr5.3:28465917-28465936 | None:intergenic | 50.0% | |
| CTAAATTCTGGGCAGCGTAG+AGG | - | chr5.3:28467708-28467727 | MS.gene070573:CDS | 50.0% | |
| GATTAGGGGCCTGTTTGGAT+TGG | - | chr5.3:28464822-28464841 | MS.gene070573:intron | 50.0% | |
| GCACCAGCATCCTTATGTTG+TGG | - | chr5.3:28466976-28466995 | MS.gene070573:intron | 50.0% | |
| GGAACCAGATCCAGATGATC+CGG | + | chr5.3:28464508-28464527 | None:intergenic | 50.0% | |
| GGGGAGTCACAACCTATACA+AGG | + | chr5.3:28465110-28465129 | None:intergenic | 50.0% | |
| GGTTCGCTCTGACCTTGTAT+AGG | - | chr5.3:28465095-28465114 | MS.gene070573:intron | 50.0% | |
| GGTTGTTGGTCAGGAACAAC+TGG | + | chr5.3:28464429-28464448 | None:intergenic | 50.0% | |
| GTTTCTTCAGGAATAGGGCG+AGG | + | chr5.3:28466589-28466608 | None:intergenic | 50.0% | |
| TACCTTGAGACTACCGCTAC+AGG | + | chr5.3:28464634-28464653 | None:intergenic | 50.0% | |
| TCTGCAATCGCCAAAAGTCG+AGG | + | chr5.3:28466801-28466820 | None:intergenic | 50.0% | |
| ! | ATCATCTGGATCTGGTTCCG+CGG | - | chr5.3:28464509-28464528 | MS.gene070573:intron | 50.0% |
| ! | CTTGCGTGATCCTCGACTTT+TGG | - | chr5.3:28466788-28466807 | MS.gene070573:intron | 50.0% |
| ! | CTTTTCTTGCTTCGAGCTGC+TGG | - | chr5.3:28467396-28467415 | MS.gene070573:intron | 50.0% |
| ! | TCGACTTTTGGCGATTGCAG+AGG | - | chr5.3:28466800-28466819 | MS.gene070573:intron | 50.0% |
| !! | CACTGACTTGTCTTTGTCGG+CGG | + | chr5.3:28467473-28467492 | None:intergenic | 50.0% |
| !! | GTTCTGAAATCAGTAGGCGG+TGG | + | chr5.3:28465968-28465987 | None:intergenic | 50.0% |
| ACACTAACACCTCAGGCCGA+AGG | + | chr5.3:28465271-28465290 | None:intergenic | 55.0% | |
| ACTGCTGATGCCGGATCATC+TGG | - | chr5.3:28464495-28464514 | MS.gene070573:intron | 55.0% | |
| AGACTACCGCTACAGGCACA+GGG | + | chr5.3:28464627-28464646 | None:intergenic | 55.0% | |
| AGATGATCCGGCATCAGCAG+TGG | + | chr5.3:28464496-28464515 | None:intergenic | 55.0% | |
| CGAGGATCACGCAAGTCCAA+GGG | + | chr5.3:28466783-28466802 | None:intergenic | 55.0% | |
| CTACACTTCGCCATAGCACC+AGG | - | chr5.3:28467732-28467751 | MS.gene070573:CDS | 55.0% | |
| GAACAACTGGGTGGTCGAGT+TGG | + | chr5.3:28464416-28464435 | None:intergenic | 55.0% | |
| GATGCCGGATCATCTGGATC+TGG | - | chr5.3:28464501-28464520 | MS.gene070573:intron | 55.0% | |
| GCATACGATGCCAAGGAAGG+AGG | + | chr5.3:28465918-28465937 | None:intergenic | 55.0% | |
| GGCATCGTATGCATACGTGC+AGG | - | chr5.3:28465926-28465945 | MS.gene070573:intron | 55.0% | |
| GGGAATGATCGGAAGGAAGG+TGG | + | chr5.3:28464458-28464477 | None:intergenic | 55.0% | |
| GTTGGTCAGGAACAACTGGG+TGG | + | chr5.3:28464425-28464444 | None:intergenic | 55.0% | |
| TCCAGGACCTACAGTACAGC+AGG | - | chr5.3:28467758-28467777 | MS.gene070573:CDS | 55.0% | |
| TCCTGCTGTACTGTAGGTCC+TGG | + | chr5.3:28467762-28467781 | None:intergenic | 55.0% | |
| TCGAGGATCACGCAAGTCCA+AGG | + | chr5.3:28466784-28466803 | None:intergenic | 55.0% | |
| TCTTCAGGAATAGGGCGAGG+TGG | + | chr5.3:28466586-28466605 | None:intergenic | 55.0% | |
| TGCCTGTAGCGGTAGTCTCA+AGG | - | chr5.3:28464629-28464648 | MS.gene070573:intron | 55.0% | |
| TGCTGTACTGTAGGTCCTGG+AGG | + | chr5.3:28467759-28467778 | None:intergenic | 55.0% | |
| ! | GACATTATCTGGCTCGCCCT+TGG | - | chr5.3:28466764-28466783 | MS.gene070573:intron | 55.0% |
| ! | GGTTGAGTGCCGTATCTGTC+AGG | - | chr5.3:28464572-28464591 | MS.gene070573:intron | 55.0% |
| ! | TGAGTGCCGTATCTGTCAGG+AGG | - | chr5.3:28464575-28464594 | MS.gene070573:intron | 55.0% |
| ACTGTAGGTCCTGGAGGTCC+TGG | + | chr5.3:28467753-28467772 | None:intergenic | 60.0% | |
| AGGAATAGGGCGAGGTGGTG+GGG | + | chr5.3:28466581-28466600 | None:intergenic | 60.0% | |
| AGTGGCAGGAGATGGCGATG+GGG | + | chr5.3:28464478-28464497 | None:intergenic | 60.0% | |
| ATCGCCATCACGATCCACCG+CGG | + | chr5.3:28464529-28464548 | None:intergenic | 60.0% | |
| CAGGAATAGGGCGAGGTGGT+GGG | + | chr5.3:28466582-28466601 | None:intergenic | 60.0% | |
| CAGTGGCAGGAGATGGCGAT+GGG | + | chr5.3:28464479-28464498 | None:intergenic | 60.0% | |
| CCAGATACACCTTCGGCCTG+AGG | - | chr5.3:28465259-28465278 | MS.gene070573:intron | 60.0% | |
| GAGACTACCGCTACAGGCAC+AGG | + | chr5.3:28464628-28464647 | None:intergenic | 60.0% | |
| GAGACTCCCTGTGCCTGTAG+CGG | - | chr5.3:28464618-28464637 | MS.gene070573:intron | 60.0% | |
| GCATCAGCAGTGGCAGGAGA+TGG | + | chr5.3:28464486-28464505 | None:intergenic | 60.0% | |
| GGAGGAGCCACTGATCCAGA+TGG | - | chr5.3:28464551-28464570 | MS.gene070573:intron | 60.0% | |
| GGCGATGGGGAATGATCGGA+AGG | + | chr5.3:28464465-28464484 | None:intergenic | 60.0% | |
| TCAGGAATAGGGCGAGGTGG+TGG | + | chr5.3:28466583-28466602 | None:intergenic | 60.0% | |
| TCTCCTGCCACTGCTGATGC+CGG | - | chr5.3:28464486-28464505 | MS.gene070573:CDS | 60.0% | |
| ! | ATCTGGATCTGGTTCCGCGG+TGG | - | chr5.3:28464512-28464531 | MS.gene070573:intron | 60.0% |
| ! | CCTCAGGCCGAAGGTGTATC+TGG | + | chr5.3:28465262-28465281 | None:intergenic | 60.0% |
| ! | GGATCGTGATGGCGATGAGG+AGG | - | chr5.3:28464533-28464552 | MS.gene070573:intron | 60.0% |
| ! | GGTGGATCGTGATGGCGATG+AGG | - | chr5.3:28464530-28464549 | MS.gene070573:intron | 60.0% |
| ! | TCCTGGAGGTCCTGGTGCTA+TGG | + | chr5.3:28467745-28467764 | None:intergenic | 60.0% |
| ! | TGGTGGGCAGGTTGTTGGTC+AGG | + | chr5.3:28464438-28464457 | None:intergenic | 60.0% |
| !! | GAAGGTGGTGGGCAGGTTGT+TGG | + | chr5.3:28464443-28464462 | None:intergenic | 60.0% |
| GATCCGGCATCAGCAGTGGC+AGG | + | chr5.3:28464492-28464511 | None:intergenic | 65.0% | |
| GCAGTGGCAGGAGATGGCGA+TGG | + | chr5.3:28464480-28464499 | None:intergenic | 65.0% | |
| GCCATAGCACCAGGACCTCC+AGG | - | chr5.3:28467741-28467760 | MS.gene070573:CDS | 65.0% | |
| GGTTCCGCGGTGGATCGTGA+TGG | - | chr5.3:28464522-28464541 | MS.gene070573:intron | 65.0% | |
| !! | TCGGAAGGAAGGTGGTGGGC+AGG | + | chr5.3:28464450-28464469 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 28464384 | 28467791 | 28464384 | ID=MS.gene070573 |
| chr5.3 | mRNA | 28464384 | 28467791 | 28464384 | ID=MS.gene070573.t1;Parent=MS.gene070573 |
| chr5.3 | exon | 28467525 | 28467791 | 28467525 | ID=MS.gene070573.t1.exon1;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28467525 | 28467791 | 28467525 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28466385 | 28466456 | 28466385 | ID=MS.gene070573.t1.exon2;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28466385 | 28466456 | 28466385 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28465552 | 28465619 | 28465552 | ID=MS.gene070573.t1.exon3;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28465552 | 28465619 | 28465552 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28465264 | 28465420 | 28465264 | ID=MS.gene070573.t1.exon4;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28465264 | 28465420 | 28465264 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28464881 | 28464964 | 28464881 | ID=MS.gene070573.t1.exon5;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28464881 | 28464964 | 28464881 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28464690 | 28464779 | 28464690 | ID=MS.gene070573.t1.exon6;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28464690 | 28464779 | 28464690 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| chr5.3 | exon | 28464384 | 28464506 | 28464384 | ID=MS.gene070573.t1.exon7;Parent=MS.gene070573.t1 |
| chr5.3 | CDS | 28464384 | 28464506 | 28464384 | ID=cds.MS.gene070573.t1;Parent=MS.gene070573.t1 |
| Gene Sequence |
| Protein sequence |
