AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033999

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033999.t1 MTR_4g011810 98.866 529 2 1 1 525 1 529 0.0 1065
MS.gene033999.t1 MTR_4g096870 46.129 310 153 6 197 500 74 375 7.04e-90 281
MS.gene033999.t1 MTR_2g086160 42.598 331 155 5 221 523 112 435 1.72e-85 271
MS.gene033999.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 5.60e-85 270
MS.gene033999.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 1.09e-84 269
MS.gene033999.t1 MTR_6g023875 38.889 378 197 9 167 524 296 659 7.93e-81 265
MS.gene033999.t1 MTR_2g086160 50.413 242 108 4 221 458 112 345 6.23e-80 254
MS.gene033999.t1 MTR_6g023855 37.405 393 216 9 150 524 144 524 2.19e-76 250
MS.gene033999.t1 MTR_7g075520 38.542 384 209 8 150 524 120 485 1.32e-74 244
MS.gene033999.t1 MTR_6g023865 34.048 373 206 7 179 522 86 447 2.11e-66 222
MS.gene033999.t1 MTR_8g099065 38.056 360 183 8 181 508 478 829 2.08e-64 225
MS.gene033999.t1 MTR_1g088750 39.048 315 173 5 222 523 921 1229 4.44e-64 226
MS.gene033999.t1 MTR_1g088750 39.048 315 173 5 222 523 872 1180 5.72e-64 226
MS.gene033999.t1 MTR_1g088730 41.275 298 158 5 222 508 915 1206 8.54e-63 223
MS.gene033999.t1 MTR_5g009840 42.969 256 138 3 217 470 494 743 4.05e-62 218
MS.gene033999.t1 MTR_6g033740 43.750 256 135 4 217 470 478 726 9.77e-61 214
MS.gene033999.t1 MTR_3g089100 45.614 228 116 2 237 462 896 1117 4.14e-60 215
MS.gene033999.t1 MTR_3g089100 45.614 228 116 2 237 462 901 1122 4.17e-60 215
MS.gene033999.t1 MTR_3g089100 45.614 228 116 2 237 462 930 1151 4.52e-60 215
MS.gene033999.t1 MTR_1g099480 41.634 257 140 4 217 470 446 695 7.72e-60 211
MS.gene033999.t1 MTR_1g101870 42.063 252 136 4 219 467 537 781 6.45e-57 204
MS.gene033999.t1 MTR_1g101870 42.063 252 136 4 219 467 485 729 7.39e-57 203
MS.gene033999.t1 MTR_1g063380 39.145 304 162 7 229 518 469 763 7.17e-56 201
MS.gene033999.t1 MTR_1g063380 42.373 236 124 4 238 470 205 431 3.98e-47 176
MS.gene033999.t1 MTR_7g101870 38.158 304 164 6 229 518 470 763 1.71e-55 199
MS.gene033999.t1 MTR_7g101870 41.949 236 125 4 238 470 206 432 1.22e-46 174
MS.gene033999.t1 MTR_2g095210 38.158 304 165 6 229 518 397 691 6.36e-55 197
MS.gene033999.t1 MTR_2g095210 41.121 107 59 2 218 320 184 290 1.42e-14 77.0
MS.gene033999.t1 MTR_1g099470 41.700 247 133 5 219 462 414 652 2.23e-54 196
MS.gene033999.t1 MTR_7g089040 38.218 348 178 8 185 525 631 948 1.66e-53 195
MS.gene033999.t1 MTR_7g089040 35.586 222 130 6 275 493 422 633 2.50e-26 114
MS.gene033999.t1 MTR_6g023845 32.931 331 155 8 215 524 82 366 5.95e-51 178
MS.gene033999.t1 MTR_3g092070 37.736 265 150 5 238 500 81 332 5.88e-50 176
MS.gene033999.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 2.40e-49 174
MS.gene033999.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 3.99e-49 174
MS.gene033999.t1 MTR_8g099065 43.290 231 121 5 181 409 478 700 4.17e-49 180
MS.gene033999.t1 MTR_3g092070 38.866 247 142 4 238 482 81 320 7.43e-49 172
MS.gene033999.t1 MTR_7g088830 38.206 301 154 6 229 525 649 921 2.85e-48 180
MS.gene033999.t1 MTR_7g088830 30.851 282 174 9 215 488 370 638 7.45e-24 106
MS.gene033999.t1 MTR_1g099480 44.898 196 99 3 217 409 446 635 5.92e-48 176
MS.gene033999.t1 MTR_4g094270 36.054 294 154 7 232 518 150 416 1.88e-47 170
MS.gene033999.t1 MTR_3g117230 39.844 256 131 9 220 467 125 365 4.18e-47 169
MS.gene033999.t1 MTR_3g112260 39.844 256 131 9 220 467 122 362 4.57e-47 169
MS.gene033999.t1 MTR_4g074920 36.644 292 152 7 237 523 668 931 2.80e-46 174
MS.gene033999.t1 MTR_2g095320 36.770 291 148 7 236 512 419 687 1.19e-45 171
MS.gene033999.t1 MTR_2g095320 38.996 259 139 6 218 470 130 375 2.32e-42 161
MS.gene033999.t1 MTR_1g083330 38.683 243 134 5 232 468 161 394 6.39e-43 158
MS.gene033999.t1 MTR_4g033235 38.683 243 134 5 232 468 162 395 7.36e-43 158
MS.gene033999.t1 MTR_1g069105 36.538 260 151 5 232 486 182 432 3.57e-42 157
MS.gene033999.t1 MTR_7g099640 36.923 260 150 5 232 486 181 431 4.11e-42 156
MS.gene033999.t1 MTR_7g089290 34.589 292 177 6 236 522 637 919 5.72e-42 161
MS.gene033999.t1 MTR_7g089290 34.589 292 177 6 236 522 665 947 7.32e-42 160
MS.gene033999.t1 MTR_7g099640 37.860 243 138 4 232 469 181 415 8.75e-42 155
MS.gene033999.t1 MTR_2g007010 32.450 302 185 6 229 525 519 806 7.73e-40 154
MS.gene033999.t1 MTR_2g007010 32.639 288 168 8 237 506 237 516 1.34e-35 142
MS.gene033999.t1 MTR_3g115110 37.736 265 139 8 229 487 242 486 1.89e-39 152
MS.gene033999.t1 MTR_2g438140 37.302 252 144 5 232 478 220 462 3.22e-39 152
MS.gene033999.t1 MTR_3g062510 34.874 238 142 4 236 468 157 386 3.45e-39 147
MS.gene033999.t1 MTR_7g088850 36.100 241 139 5 236 470 280 511 5.43e-39 150
MS.gene033999.t1 MTR_7g088850 29.437 231 144 9 245 468 24 242 2.10e-14 76.3
MS.gene033999.t1 MTR_2g438140 37.698 252 143 5 232 478 280 522 5.65e-39 151
MS.gene033999.t1 MTR_7g010800 37.154 253 143 7 232 478 200 442 4.06e-38 149
MS.gene033999.t1 MTR_4g094662 37.154 253 143 6 232 478 223 465 1.04e-37 147
MS.gene033999.t1 MTR_1g095660 36.398 261 139 9 220 467 104 350 1.38e-37 142
MS.gene033999.t1 MTR_7g088980 35.200 250 147 5 227 470 125 365 2.69e-37 142
MS.gene033999.t1 MTR_3g104470 34.551 301 165 10 233 525 215 491 1.06e-36 144
MS.gene033999.t1 MTR_3g104480 35.974 303 160 11 229 525 215 489 1.13e-36 144
MS.gene033999.t1 MTR_7g088980 35.200 250 147 5 227 470 275 515 1.76e-36 142
MS.gene033999.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 6.47e-27 114
MS.gene033999.t1 MTR_7g088980 36.100 241 139 5 236 470 216 447 1.87e-36 141
MS.gene033999.t1 MTR_7g088980 34.118 170 98 6 305 468 17 178 2.86e-12 69.3
MS.gene033999.t1 MTR_7g088980 35.200 250 147 5 227 470 301 541 3.67e-36 142
MS.gene033999.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.93e-24 107
MS.gene033999.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 6.11e-36 142
MS.gene033999.t1 MTR_3g023900 31.847 314 171 8 227 519 520 811 1.17e-35 142
MS.gene033999.t1 MTR_3g023900 33.562 292 171 8 237 508 233 521 1.29e-32 133
MS.gene033999.t1 MTR_7g096060 38.431 255 132 8 238 480 240 481 1.24e-35 141
MS.gene033999.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 1.25e-35 142
MS.gene033999.t1 MTR_2g078630 33.333 267 146 7 227 470 41 298 6.07e-35 140
MS.gene033999.t1 MTR_2g078630 33.333 267 146 7 227 470 569 826 7.69e-35 140
MS.gene033999.t1 MTR_7g078570 36.027 297 158 10 238 525 192 465 8.16e-35 139
MS.gene033999.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.06e-34 139
MS.gene033999.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.07e-34 139
MS.gene033999.t1 MTR_6g016600 36.948 249 142 6 235 478 314 552 1.80e-33 134
MS.gene033999.t1 MTR_1g069105 38.614 202 111 4 232 428 182 375 2.10e-33 131
MS.gene033999.t1 MTR_4g064350 35.216 301 163 10 234 525 316 593 2.73e-33 135
MS.gene033999.t1 MTR_5g075340 32.492 317 175 11 215 525 213 496 4.00e-33 134
MS.gene033999.t1 MTR_1g028390 35.793 271 152 8 227 493 318 570 1.88e-32 132
MS.gene033999.t1 MTR_3g062510 40.860 186 97 4 236 416 157 334 2.22e-32 128
MS.gene033999.t1 MTR_6g059690 37.255 255 135 8 238 480 197 438 3.13e-32 131
MS.gene033999.t1 MTR_5g069780 34.783 299 164 11 238 525 313 591 3.81e-32 131
MS.gene033999.t1 MTR_0376s0020 36.255 251 142 7 238 480 1 241 4.59e-32 130
MS.gene033999.t1 MTR_2g024440 34.677 248 138 6 238 474 296 530 9.83e-31 126
MS.gene033999.t1 MTR_2g024440 34.677 248 138 6 238 474 297 531 1.04e-30 126
MS.gene033999.t1 MTR_2g024440 34.677 248 138 6 238 474 214 448 1.14e-30 125
MS.gene033999.t1 MTR_3g023890 31.546 317 172 9 227 520 374 668 3.23e-30 125
MS.gene033999.t1 MTR_3g023890 30.952 294 166 11 240 508 94 375 9.78e-25 108
MS.gene033999.t1 MTR_3g462930 33.670 297 170 10 238 525 304 582 1.36e-29 124
MS.gene033999.t1 MTR_5g075360 33.221 298 169 10 232 525 12 283 1.88e-28 118
MS.gene033999.t1 MTR_5g075360 33.221 298 169 10 232 525 62 333 6.42e-28 117
MS.gene033999.t1 MTR_5g075360 33.221 298 169 10 232 525 188 459 7.51e-28 118
MS.gene033999.t1 MTR_8g023550 31.834 289 156 9 191 467 117 376 7.73e-28 115
MS.gene033999.t1 MTR_8g099605 33.730 252 137 7 235 469 401 639 1.14e-27 118
MS.gene033999.t1 MTR_5g075360 33.221 298 169 10 232 525 238 509 1.32e-27 117
MS.gene033999.t1 MTR_8g099605 33.730 252 137 7 235 469 160 398 1.50e-27 117
MS.gene033999.t1 MTR_3g096000 35.409 257 146 7 233 478 291 538 1.87e-27 117
MS.gene033999.t1 MTR_8g469460 33.559 295 132 10 238 525 207 444 3.72e-27 116
MS.gene033999.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 3.91e-27 115
MS.gene033999.t1 MTR_7g088980 29.435 248 121 6 227 470 275 472 2.52e-22 100
MS.gene033999.t1 MTR_3g104490 32.542 295 143 10 238 525 207 452 1.11e-26 114
MS.gene033999.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.55e-24 107
MS.gene033999.t1 MTR_7g088980 29.435 248 121 6 227 470 301 498 4.54e-22 100
MS.gene033999.t1 MTR_4g088885 33.333 267 140 12 269 514 256 505 8.62e-24 105
MS.gene033999.t1 MTR_8g056860 30.000 220 146 5 252 467 484 699 2.84e-22 101
MS.gene033999.t1 MTR_5g074850 32.653 196 120 5 275 467 542 728 8.18e-19 90.9
MS.gene033999.t1 MTR_1g044600 31.739 230 129 7 303 525 193 401 4.45e-18 87.4
MS.gene033999.t1 MTR_6g005760 27.488 211 117 6 273 458 362 561 4.04e-14 75.5
MS.gene033999.t1 MTR_6g005760 27.488 211 117 6 273 458 234 433 4.47e-14 75.1
MS.gene033999.t1 MTR_5g020530 27.830 212 112 7 273 457 387 584 5.51e-14 75.1
MS.gene033999.t1 MTR_3g076930 28.926 242 132 8 202 425 137 356 1.65e-13 73.2
MS.gene033999.t1 MTR_4g083460 28.400 250 109 9 240 467 839 1040 2.88e-12 70.1
MS.gene033999.t1 MTR_4g077880 25.943 212 120 6 273 458 368 568 9.36e-12 68.2
MS.gene033999.t1 MTR_4g112600 43.038 79 43 2 241 317 3 81 3.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033999.t1 AT1G80350 81.489 524 92 5 4 525 3 523 0.0 874
MS.gene033999.t1 AT2G34560 44.186 344 168 9 192 524 50 380 8.67e-92 286
MS.gene033999.t1 AT2G34560 44.186 344 168 9 192 524 59 389 1.15e-91 286
MS.gene033999.t1 AT2G27600 40.683 322 159 4 227 523 118 432 1.80e-82 263
MS.gene033999.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene033999.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene033999.t1 AT2G45500 42.151 344 174 8 185 524 164 486 5.33e-80 258
MS.gene033999.t1 AT2G45500 42.151 344 174 8 185 524 168 490 6.94e-80 258
MS.gene033999.t1 AT2G45500 42.151 344 174 8 185 524 174 496 8.94e-80 258
MS.gene033999.t1 AT3G27120 42.020 307 165 4 220 524 382 677 3.01e-78 259
MS.gene033999.t1 AT3G19740 39.863 291 162 5 237 523 700 981 1.22e-64 227
MS.gene033999.t1 AT4G28000 41.971 274 150 5 218 489 496 762 2.56e-63 221
MS.gene033999.t1 AT4G28000 41.971 274 150 5 218 489 496 762 3.58e-63 221
MS.gene033999.t1 AT4G28000 41.971 274 150 5 218 489 494 760 3.68e-63 221
MS.gene033999.t1 AT4G02480 39.241 316 171 6 222 523 943 1251 1.23e-62 222
MS.gene033999.t1 AT1G02890 40.000 315 170 7 222 523 924 1232 4.31e-62 221
MS.gene033999.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene033999.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene033999.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene033999.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene033999.t1 AT1G64110 38.462 325 175 7 218 523 492 810 8.32e-62 217
MS.gene033999.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene033999.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene033999.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene033999.t1 AT5G52882 44.094 254 133 5 219 470 494 740 1.82e-61 216
MS.gene033999.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene033999.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene033999.t1 AT4G24860 39.163 263 152 2 226 486 778 1034 2.91e-58 209
MS.gene033999.t1 AT4G24860 39.163 263 152 2 226 486 801 1057 3.58e-58 209
MS.gene033999.t1 AT4G24860 39.163 263 152 2 226 486 805 1061 4.85e-58 209
MS.gene033999.t1 AT4G24860 39.163 263 152 2 226 486 803 1059 4.92e-58 209
MS.gene033999.t1 AT5G03340 38.689 305 162 6 229 518 468 762 5.81e-56 201
MS.gene033999.t1 AT5G03340 40.541 259 139 5 218 470 181 430 1.87e-46 174
MS.gene033999.t1 AT3G09840 37.705 305 165 6 229 518 468 762 1.33e-53 194
MS.gene033999.t1 AT3G09840 40.541 259 139 5 218 470 181 430 1.24e-46 174
MS.gene033999.t1 AT3G53230 38.870 301 165 5 229 518 469 761 6.81e-53 192
MS.gene033999.t1 AT3G53230 40.927 259 138 5 218 470 182 431 5.40e-47 175
MS.gene033999.t1 AT4G27680 36.531 271 157 4 238 506 81 338 8.78e-51 179
MS.gene033999.t1 AT3G56690 39.933 298 155 8 229 517 712 994 8.64e-50 184
MS.gene033999.t1 AT3G56690 36.607 224 125 6 272 492 416 625 3.51e-32 132
MS.gene033999.t1 AT5G53540 36.604 265 153 5 238 500 84 335 7.12e-49 174
MS.gene033999.t1 AT1G62130 41.949 236 113 6 237 470 742 955 5.67e-48 179
MS.gene033999.t1 AT1G62130 41.949 236 113 6 237 470 749 962 6.28e-48 179
MS.gene033999.t1 AT5G19990 36.054 294 154 7 232 518 94 360 6.85e-47 167
MS.gene033999.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene033999.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene033999.t1 AT5G20000 36.054 294 154 7 232 518 152 418 1.26e-46 168
MS.gene033999.t1 AT5G43010 39.062 256 133 9 220 467 122 362 1.95e-46 167
MS.gene033999.t1 AT1G45000 39.062 256 133 9 220 467 122 362 2.27e-46 167
MS.gene033999.t1 AT1G02890 35.556 315 156 9 222 523 924 1204 1.23e-45 172
MS.gene033999.t1 AT1G03000 35.374 294 173 7 236 522 653 936 9.77e-45 169
MS.gene033999.t1 AT3G05530 38.683 243 134 5 232 468 162 395 4.89e-43 159
MS.gene033999.t1 AT1G09100 38.683 243 134 5 232 468 161 394 1.19e-42 157
MS.gene033999.t1 AT2G20140 37.860 243 138 4 232 469 179 413 2.03e-42 157
MS.gene033999.t1 AT4G29040 37.449 243 139 4 232 469 179 413 4.11e-42 156
MS.gene033999.t1 AT1G53750 35.986 289 159 8 191 467 117 391 1.11e-40 152
MS.gene033999.t1 AT1G50250 38.113 265 138 8 229 487 252 496 1.09e-39 154
MS.gene033999.t1 AT2G03670 34.000 300 175 7 180 472 232 515 1.59e-39 152
MS.gene033999.t1 AT2G03670 34.615 234 139 6 242 468 23 249 6.19e-30 124
MS.gene033999.t1 AT5G58290 34.874 238 142 4 236 468 150 379 2.81e-39 148
MS.gene033999.t1 AT5G42270 37.736 265 139 8 229 487 240 484 3.57e-39 152
MS.gene033999.t1 AT5G15250 37.037 243 137 6 232 468 215 447 5.06e-39 151
MS.gene033999.t1 AT2G26140 36.082 291 158 9 239 525 225 491 3.29e-38 149
MS.gene033999.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene033999.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene033999.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene033999.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene033999.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene033999.t1 AT2G30950 36.364 242 140 5 232 468 222 454 1.74e-36 144
MS.gene033999.t1 AT1G53780 36.047 258 144 7 220 469 322 566 1.82e-36 143
MS.gene033999.t1 AT1G53780 36.047 258 144 7 220 469 344 588 1.98e-36 143
MS.gene033999.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene033999.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene033999.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene033999.t1 AT3G01610 32.416 327 186 8 203 508 474 786 2.40e-36 144
MS.gene033999.t1 AT3G01610 33.106 293 179 5 232 508 224 515 3.51e-36 144
MS.gene033999.t1 AT3G01610 32.219 329 184 9 203 508 474 786 2.61e-36 144
MS.gene033999.t1 AT3G01610 33.106 293 179 5 232 508 224 515 4.11e-36 143
MS.gene033999.t1 AT5G15250 34.211 266 136 7 232 468 215 470 1.91e-35 139
MS.gene033999.t1 AT3G16290 37.121 264 145 7 210 467 384 632 4.66e-35 140
MS.gene033999.t1 AT1G07510 34.437 302 156 10 238 525 324 597 1.97e-34 138
MS.gene033999.t1 AT3G02450 37.751 249 140 6 235 478 328 566 2.21e-34 137
MS.gene033999.t1 AT1G05910 35.628 247 141 6 232 469 372 609 4.02e-34 138
MS.gene033999.t1 AT3G15120 34.454 238 138 6 240 468 718 946 1.53e-33 136
MS.gene033999.t1 AT3G15120 34.454 238 138 6 240 468 728 956 1.83e-33 136
MS.gene033999.t1 AT5G53170 36.822 258 141 8 240 493 361 600 3.56e-33 134
MS.gene033999.t1 AT2G29080 35.216 301 154 10 238 525 319 591 1.04e-32 133
MS.gene033999.t1 AT4G04180 34.894 235 129 6 238 461 316 537 5.46e-32 130
MS.gene033999.t1 AT4G04180 34.894 235 129 6 238 461 311 532 5.75e-32 130
MS.gene033999.t1 AT3G47060 38.333 240 129 7 238 468 322 551 1.34e-31 130
MS.gene033999.t1 AT2G03670 34.615 234 139 6 242 468 23 249 1.04e-30 124
MS.gene033999.t1 AT2G03670 34.634 205 121 5 180 379 232 428 2.79e-21 96.7
MS.gene033999.t1 AT5G58870 33.220 295 174 7 238 525 326 604 4.43e-30 125
MS.gene033999.t1 AT5G08470 33.333 237 140 5 240 470 834 1058 1.42e-29 124
MS.gene033999.t1 AT5G08470 33.333 237 140 5 240 470 843 1067 1.57e-29 124
MS.gene033999.t1 AT1G45000 41.420 169 86 6 220 382 122 283 5.07e-29 117
MS.gene033999.t1 AT5G64580 35.019 257 147 7 233 478 308 555 4.73e-27 116
MS.gene033999.t1 AT4G23940 33.865 251 136 7 235 468 424 661 7.33e-27 115
MS.gene033999.t1 AT4G04910 33.333 267 140 12 269 514 246 495 1.38e-25 111
MS.gene033999.t1 AT1G79560 31.818 198 127 5 275 468 527 720 3.93e-23 104
MS.gene033999.t1 AT1G79560 31.818 198 127 5 275 468 527 720 4.21e-23 104
MS.gene033999.t1 AT1G79560 29.218 243 151 7 243 468 482 720 5.12e-23 103
MS.gene033999.t1 AT5G08470 37.956 137 77 3 240 372 843 975 5.08e-19 91.7
MS.gene033999.t1 AT3G04340 33.831 201 110 9 235 425 778 965 2.17e-15 80.1
MS.gene033999.t1 AT2G18330 30.872 149 91 4 273 420 384 521 7.28e-13 71.6
MS.gene033999.t1 AT5G16930 26.415 212 119 7 273 458 397 597 1.41e-12 70.9
MS.gene033999.t1 AT4G36580 25.581 215 120 6 273 458 381 584 2.90e-12 69.7
MS.gene033999.t1 AT3G03060 29.114 158 100 4 273 429 385 531 1.67e-11 67.4

Find 146 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCGCCTCATTCCATTTA+AGG 0.090167 4.3:-85109725 None:intergenic
GAGAAGTGGTTTCATGAATT+TGG 0.158813 4.3:+85109886 MS.gene033999:CDS
TCTTTACGACTCTCAAAATT+TGG 0.172323 4.3:-85109247 None:intergenic
AATCTAACCAAGATAGTAAA+TGG 0.183201 4.3:+85107295 MS.gene033999:CDS
AACGAAGATTTCGTAGAAAT+TGG 0.195781 4.3:-85107144 None:intergenic
ATCCATTTCGCACGAATTAA+AGG 0.199610 4.3:-85107015 None:intergenic
TGTCGTGATGCTTCCTTAAA+TGG 0.219991 4.3:+85109712 MS.gene033999:CDS
TCAAGCATTTCAGCCAATTC+AGG 0.249762 4.3:-85107898 None:intergenic
AGCAACTAGATGCAGATAAA+AGG 0.275644 4.3:+85107079 MS.gene033999:CDS
GAACTTCTGGTTCAGGTTGA+TGG 0.286049 4.3:+85108950 MS.gene033999:CDS
CTCGAGCCCATTTACTATCT+TGG 0.287375 4.3:-85107302 None:intergenic
ACTTCTATCATCTTCTTTGA+TGG 0.304578 4.3:+85105957 MS.gene033999:CDS
AAGCCGTTGTGCTTCCCTTA+TGG 0.308493 4.3:+85108001 MS.gene033999:CDS
CTGCTACTTTAGCTTCTAAA+TGG 0.310247 4.3:+85108531 MS.gene033999:CDS
ACCCACTTGACCACCCCTTC+CGG 0.318156 4.3:-85107265 None:intergenic
GATGCACCACCTTTCTTTAC+CGG 0.324656 4.3:-85107417 None:intergenic
GTCCTTATGTTTGGTCCTCC+TGG 0.327313 4.3:+85108440 MS.gene033999:CDS
AAGGGTGAAGTCTGAACTTC+TGG 0.334804 4.3:+85108937 MS.gene033999:CDS
TGGAAAGGTGTCCTTATGTT+TGG 0.341007 4.3:+85108431 MS.gene033999:CDS
AGAAGTGTCTTTCCAGTTCC+AGG 0.347867 4.3:-85108458 None:intergenic
TTCTATTTCATAAGGGCATC+TGG 0.352796 4.3:+85108896 MS.gene033999:intron
CGGTGGTGGTGGTTCTTCAT+TGG 0.361816 4.3:+85105875 MS.gene033999:CDS
GAAGTCTGAACTTCTGGTTC+AGG 0.362123 4.3:+85108943 MS.gene033999:CDS
ATGGATGCCTGAATATTTCC+AGG 0.363539 4.3:+85108020 MS.gene033999:CDS
CCCACTTGACCACCCCTTCC+GGG 0.366495 4.3:-85107264 None:intergenic
TTCATCAATGAAAATTGTAC+TGG 0.368845 4.3:-85108612 None:intergenic
TGAAATTAAGAGTATGTCTA+AGG 0.369309 4.3:+85109768 MS.gene033999:CDS
ATGTTTGGTCCTCCTGGAAC+TGG 0.386041 4.3:+85108446 MS.gene033999:CDS
GTAAAGAAAGGTGGTGCATC+TGG 0.387564 4.3:+85107420 MS.gene033999:CDS
ATCCTTTAATTCGTGCGAAA+TGG 0.394478 4.3:+85107013 MS.gene033999:CDS
CGAAGGTCCTGACCCTGAAT+TGG 0.398187 4.3:+85107885 MS.gene033999:CDS
GCAAGAGATTACGCTCTTGA+AGG 0.422552 4.3:+85105924 MS.gene033999:CDS
GATGGAGGGCGTCTTCCAAT+AGG 0.424263 4.3:-85107117 None:intergenic
GGTGGTGGTTCTTCATTGGC+AGG 0.425015 4.3:+85105879 MS.gene033999:CDS
GAGAGCATGAATCATCTAGA+AGG 0.428309 4.3:+85108918 MS.gene033999:CDS
CGTCGAACTGATGGCTATAG+TGG 0.438729 4.3:+85109670 MS.gene033999:CDS
TCAAAATCACACATGGCAAC+AGG 0.440279 4.3:-85109808 None:intergenic
GAAGTAGGATACTCATCTAA+TGG 0.443032 4.3:-85107177 None:intergenic
CAACGGTCTTCAAATTTATC+CGG 0.446879 4.3:-85109276 None:intergenic
GCGTTTAAAGATAACCCTAT+TGG 0.447225 4.3:+85107102 MS.gene033999:CDS
TCTTTACCGGAGTTGATCCT+CGG 0.447984 4.3:-85107404 None:intergenic
CCGAAAATTAGTAATGGTCT+TGG 0.448313 4.3:+85109006 MS.gene033999:CDS
AAGGTTACCTGGAAATATTC+AGG 0.453553 4.3:-85108027 None:intergenic
GAAATATTCAGGCATCCATA+AGG 0.458081 4.3:-85108016 None:intergenic
GTGCTGTTGCACAAATCAAC+AGG 0.461564 4.3:+85105979 MS.gene033999:CDS
ATTTCAGCCAATTCAGGGTC+AGG 0.462738 4.3:-85107892 None:intergenic
CTAGGTGGCCTCCACACGTC+GGG 0.465003 4.3:-85107222 None:intergenic
CAAGCATTTCAGCCAATTCA+GGG 0.466679 4.3:-85107897 None:intergenic
TTCGTAGAAATTGGAGGCGA+TGG 0.467792 4.3:-85107135 None:intergenic
GCAACTAGATGCAGATAAAA+GGG 0.468454 4.3:+85107080 MS.gene033999:CDS
ACTGGCCGTGGCGCAAAGGC+TGG 0.474587 4.3:+85107351 MS.gene033999:CDS
TCCAGGGAATTAGAAGACCT+TGG 0.475874 4.3:+85108411 MS.gene033999:intron
AAAACAATGGCCGGTGGTGG+TGG 0.478709 4.3:+85105864 None:intergenic
AATTGGCTGAAATGCTTGAA+AGG 0.482451 4.3:+85107902 MS.gene033999:CDS
AGGCTGGTGGTGCTACTAGC+AGG 0.485231 4.3:+85107367 MS.gene033999:CDS
TTGATTCTCTATGCAATGCT+AGG 0.489844 4.3:+85108636 MS.gene033999:CDS
CGACTCTCAAAATTTGGAAG+AGG 0.493711 4.3:-85109241 None:intergenic
GTGAGATGGGATGATGTTGC+AGG 0.493791 4.3:+85107949 MS.gene033999:CDS
AGAGTCGTAAAGAGTTGATC+CGG 0.496827 4.3:+85109257 MS.gene033999:CDS
TTCCAGGAGGACCAAACATA+AGG 0.497922 4.3:-85108442 None:intergenic
TGATTCTCTATGCAATGCTA+GGG 0.500887 4.3:+85108637 MS.gene033999:CDS
ACCCGGAAGGGGTGGTCAAG+TGG 0.503616 4.3:+85107263 MS.gene033999:CDS
ATGGAGGGCGTCTTCCAATA+GGG 0.504260 4.3:-85107116 None:intergenic
TAGAATGGTGATGGTGAAGA+TGG 0.504832 4.3:+85107841 MS.gene033999:intron
ATCTAACCAAGATAGTAAAT+GGG 0.505265 4.3:+85107296 MS.gene033999:CDS
AATGTAATGCAGGAGAAGGC+TGG 0.512666 4.3:+85109201 MS.gene033999:intron
AACCTCTCCTGGAGTGAGAT+GGG 0.514638 4.3:+85107936 MS.gene033999:CDS
CAATGAAGAACCACCACCAC+CGG 0.515825 4.3:-85105874 None:intergenic
GATGTGTTAGAAACCTCTCC+TGG 0.517926 4.3:+85107925 MS.gene033999:CDS
AAATATTCAGGCATCCATAA+GGG 0.520528 4.3:-85108015 None:intergenic
AGCCTTTGCGCCACGGCCAG+TGG 0.526659 4.3:-85107349 None:intergenic
AAGGAAGAATTAGATGAAGT+AGG 0.527073 4.3:-85107192 None:intergenic
GAAGATTTCGTAGAAATTGG+AGG 0.528602 4.3:-85107141 None:intergenic
GAGAAAACAATGGCCGGTGG+TGG 0.529484 4.3:+85105861 None:intergenic
TACTAGTAGAAGACCCGGAA+GGG 0.533945 4.3:+85107251 MS.gene033999:CDS
AAACCTCTCCTGGAGTGAGA+TGG 0.536341 4.3:+85107935 MS.gene033999:CDS
CTTCTACTAGTATCTCTGCT+AGG 0.536669 4.3:-85107240 None:intergenic
TACCACTGGCCGTGGCGCAA+AGG 0.538736 4.3:+85107347 MS.gene033999:CDS
CTTTACCGGAGTTGATCCTC+GGG 0.541461 4.3:-85107403 None:intergenic
GGAATGAGGCGAAAGATAGC+AGG 0.543448 4.3:+85109733 MS.gene033999:CDS
GTAGAAATTGGAGGCGATGG+AGG 0.544696 4.3:-85107132 None:intergenic
GAAGTGGCTCGTCGAACTGA+TGG 0.544733 4.3:+85109661 MS.gene033999:CDS
GGATCAACTCCGGTAAAGAA+AGG 0.545338 4.3:+85107408 MS.gene033999:CDS
AAAGCAGTTGCTACTGAATG+TGG 0.546539 4.3:+85108485 MS.gene033999:CDS
TGGCAGCTACTAACTTCCCA+TGG 0.547739 4.3:+85109026 MS.gene033999:CDS
GGTCCAACGAAGTGTTTCTC+CGG 0.550231 4.3:+85109846 MS.gene033999:CDS
GAGAGAGAGAAAACAATGGC+CGG 0.553052 4.3:+85105855 None:intergenic
GGCCGTGGCGCAAAGGCTGG+TGG 0.554155 4.3:+85107354 MS.gene033999:CDS
ACATCATCCCATCTCACTCC+AGG 0.555451 4.3:-85107943 None:intergenic
AGTGCCTCATCTATGTCCCA+TGG 0.556771 4.3:-85109043 None:intergenic
ATTGGCTGAAATGCTTGAAA+GGG 0.558913 4.3:+85107903 MS.gene033999:CDS
AGAATGGTGATGGTGAAGAT+GGG 0.559086 4.3:+85107842 MS.gene033999:intron
TAGAAATTGGAGGCGATGGA+GGG 0.560439 4.3:-85107131 None:intergenic
AACAGTGCAACAAATGAAGA+TGG 0.563634 4.3:+85108980 MS.gene033999:CDS
CACCACCAGCCTTTGCGCCA+CGG 0.565084 4.3:-85107356 None:intergenic
GGGACATAGATGAGGCACTA+AGG 0.566845 4.3:+85109047 MS.gene033999:CDS
ATTCATGAAACCACTTCTCA+TGG 0.568402 4.3:-85109882 None:intergenic
ATATTGAACGCCATGAGAAG+TGG 0.568930 4.3:+85109872 MS.gene033999:CDS
TGATGTCAACATAGATGAAG+TGG 0.569864 4.3:+85109645 MS.gene033999:CDS
GGAAGCATCACGACAGACAT+TGG 0.572577 4.3:-85109704 None:intergenic
ACAACAAGTACCACTGGCCG+TGG 0.574301 4.3:+85107339 MS.gene033999:CDS
TCATGGCGTTCAATATCAGC+CGG 0.580580 4.3:-85109865 None:intergenic
CCCGGAAGGGGTGGTCAAGT+GGG 0.581390 4.3:+85107264 MS.gene033999:CDS
TCGATGATCCCGACGTGTGG+AGG 0.583952 4.3:+85107214 MS.gene033999:CDS
GTGCCTCATCTATGTCCCAT+GGG 0.589159 4.3:-85109042 None:intergenic
ACTTTAGCTTCTAAATGGCG+TGG 0.593643 4.3:+85108536 MS.gene033999:CDS
TCATCAATGAAAATTGTACT+GGG 0.599644 4.3:-85108611 None:intergenic
ACAAAGACAACAAGTACCAC+TGG 0.602530 4.3:+85107333 MS.gene033999:CDS
CAGCCGGAGAAACACTTCGT+TGG 0.605662 4.3:-85109849 None:intergenic
GCTACTAGCAGGACTAACTC+AGG 0.606405 4.3:+85107378 MS.gene033999:CDS
AGAGATACTAGTAGAAGACC+CGG 0.607403 4.3:+85107246 MS.gene033999:CDS
GCTAGGTGGCCTCCACACGT+CGG 0.609241 4.3:-85107223 None:intergenic
ATCCCATCTCACTCCAGGAG+AGG 0.610773 4.3:-85107938 None:intergenic
ATGCTTCCTTAAATGGAATG+AGG 0.612903 4.3:+85109719 MS.gene033999:CDS
CCACACGTCGGGATCATCGA+AGG 0.616072 4.3:-85107211 None:intergenic
TGTTAAGAAAGCTCTTTCTG+AGG 0.617902 4.3:+85107041 MS.gene033999:CDS
GGCAGCTACTAACTTCCCAT+GGG 0.620186 4.3:+85109027 MS.gene033999:CDS
TGGTAGCCGAAAATTAGTAA+TGG 0.621203 4.3:+85109000 MS.gene033999:CDS
AAGCAGTTGCTACTGAATGT+GGG 0.621604 4.3:+85108486 MS.gene033999:CDS
AACATAAGGACACCTTTCCA+AGG 0.627199 4.3:-85108428 None:intergenic
GTCTAAGGATGAGATTTCAA+AGG 0.631259 4.3:+85109783 MS.gene033999:CDS
CCTTCGATGATCCCGACGTG+TGG 0.633383 4.3:+85107211 MS.gene033999:CDS
AGTAGAAGACCCGGAAGGGG+TGG 0.634193 4.3:+85107255 MS.gene033999:CDS
ACTAGTAGAAGACCCGGAAG+GGG 0.634263 4.3:+85107252 MS.gene033999:CDS
AGAGCATGAATCATCTAGAA+GGG 0.636154 4.3:+85108919 MS.gene033999:CDS
GATAAATTTGAAGACCGTTG+AGG 0.636632 4.3:+85109279 MS.gene033999:CDS
CTACTAGTATCTCTGCTAGG+TGG 0.637168 4.3:-85107237 None:intergenic
TTCATCTATGTTGACATCAG+CGG 0.638522 4.3:-85109641 None:intergenic
AGGACTAACTCAGGGGCCCG+AGG 0.638876 4.3:+85107387 MS.gene033999:CDS
GATTCTCTATGCAATGCTAG+GGG 0.641079 4.3:+85108638 MS.gene033999:CDS
CTACTAGCAGGACTAACTCA+GGG 0.641102 4.3:+85107379 MS.gene033999:CDS
TGCTTCTTCAAAATCACACA+TGG 0.645740 4.3:-85109815 None:intergenic
CAAGATAGTAAATGGGCTCG+AGG 0.648115 4.3:+85107303 MS.gene033999:CDS
GCGTGGAGAAAGTGAGCGAA+TGG 0.660809 4.3:+85108553 MS.gene033999:CDS
TCAACTCCGGTAAAGAAAGG+TGG 0.662437 4.3:+85107411 MS.gene033999:CDS
CATCCATAAGGGAAGCACAA+CGG 0.667497 4.3:-85108004 None:intergenic
GGAATTAGAAGACCTTGGAA+AGG 0.669356 4.3:+85108416 MS.gene033999:CDS
CTTCCCATGGGACATAGATG+AGG 0.669966 4.3:+85109039 MS.gene033999:CDS
ATACTAGTAGAAGACCCGGA+AGG 0.671745 4.3:+85107250 MS.gene033999:CDS
ATTCTCTATGCAATGCTAGG+GGG 0.690607 4.3:+85108639 MS.gene033999:CDS
TCAAATAAGAGAATATACGA+AGG 0.694533 4.3:+85107868 MS.gene033999:CDS
AGGGGCCCGAGGATCAACTC+CGG 0.695012 4.3:+85107398 MS.gene033999:CDS
AGAGAGAAAACAATGGCCGG+TGG 0.695450 4.3:+85105858 None:intergenic
AGTGTCTTTCCAGTTCCAGG+AGG 0.734815 4.3:-85108455 None:intergenic
TACTAGCAGGACTAACTCAG+GGG 0.751310 4.3:+85107380 MS.gene033999:CDS
GAGAAAGTGAGCGAATGGTG+CGG 0.752385 4.3:+85108558 MS.gene033999:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATCAAAATAATTAAA+TGG - chr4.3:85106213-85106232 None:intergenic 10.0%
!! AAACATCAAAATAATTAAAT+GGG - chr4.3:85106212-85106231 None:intergenic 10.0%
!! TTTGTTTCATTATAAATAAT+GGG + chr4.3:85106158-85106177 MS.gene033999:intron 10.0%
!!! TTTACTTCATTTTAAATAAT+GGG + chr4.3:85106045-85106064 MS.gene033999:intron 10.0%
!!! TTTTACTTCATTTTAAATAA+TGG + chr4.3:85106044-85106063 MS.gene033999:intron 10.0%
!!! TTTTGTTTCATTATAAATAA+TGG + chr4.3:85106157-85106176 MS.gene033999:intron 10.0%
!! AATTAACTTCTATTTCATAA+GGG + chr4.3:85108889-85108908 MS.gene033999:intron 15.0%
!! ATGAAATTATTATTGCTAAT+AGG + chr4.3:85108236-85108255 MS.gene033999:intron 15.0%
!! GCAATAATAATTTCATAAAT+CGG - chr4.3:85108232-85108251 None:intergenic 15.0%
!! TATTTAAAAGGATAAAACTT+AGG - chr4.3:85106532-85106551 None:intergenic 15.0%
!! TGATATTTATAGTAGAAAAT+CGG - chr4.3:85109359-85109378 None:intergenic 15.0%
!!! TGTGAATGTTTTTATTTTAT+TGG + chr4.3:85109490-85109509 MS.gene033999:intron 15.0%
!! AACAAACTTTACAATGAAAA+TGG - chr4.3:85106137-85106156 None:intergenic 20.0%
!! ACAAACTTTACAATGAAAAT+GGG - chr4.3:85106136-85106155 None:intergenic 20.0%
!! ACACACATCAAAATAATTAA+TGG - chr4.3:85106111-85106130 None:intergenic 20.0%
!! ATATCTATTACTTAATGAAC+TGG - chr4.3:85108783-85108802 None:intergenic 20.0%
!! ATTAAATACAACACAAATCT+AGG - chr4.3:85106943-85106962 None:intergenic 20.0%
!! ATTCCTACGTATTATTTATT+CGG + chr4.3:85107541-85107560 MS.gene033999:intron 20.0%
!! ATTTCTTGATATCAATCAAT+TGG + chr4.3:85106694-85106713 MS.gene033999:intron 20.0%
!! ATTTCTTGATATGAATTAAG+TGG + chr4.3:85106390-85106409 MS.gene033999:intron 20.0%
!! CACACATCAAAATAATTAAT+GGG - chr4.3:85106110-85106129 None:intergenic 20.0%
!! CATTACATTAAACATGAAAT+CGG - chr4.3:85109190-85109209 None:intergenic 20.0%
!! GAATTAACTTCTATTTCATA+AGG + chr4.3:85108888-85108907 MS.gene033999:intron 20.0%
!! TAGTTTATTATAACCACAAA+AGG - chr4.3:85106481-85106500 None:intergenic 20.0%
!! TTAAATACAACACAAATCTA+GGG - chr4.3:85106942-85106961 None:intergenic 20.0%
!! TTATTCAATTATGATTCTGT+AGG - chr4.3:85107600-85107619 None:intergenic 20.0%
!! TTCTCTAATCTTCATTAAAT+CGG + chr4.3:85108731-85108750 MS.gene033999:intron 20.0%
!!! GAACAAACTTTAGAATAAAA+AGG - chr4.3:85106024-85106043 None:intergenic 20.0%
!!! GTATTTGTACTTTTATAGAA+TGG + chr4.3:85107826-85107845 MS.gene033999:intron 20.0%
!!! TAATTGAAGTTTTAAGTTGA+TGG + chr4.3:85106337-85106356 MS.gene033999:intron 20.0%
!!! TAGAAAGTGATAAAAACTTT+TGG + chr4.3:85109111-85109130 MS.gene033999:intron 20.0%
!!! TGTTTAAAGCTTTATTTATC+AGG + chr4.3:85109396-85109415 MS.gene033999:intron 20.0%
!!! TTCTTAGATAATTTTTGCTT+TGG + chr4.3:85109324-85109343 MS.gene033999:intron 20.0%
! AAATACCATTCAAAACCATA+AGG - chr4.3:85107812-85107831 None:intergenic 25.0%
! AATCTAACCAAGATAGTAAA+TGG + chr4.3:85107295-85107314 MS.gene033999:CDS 25.0%
! ACTGCAACACAATATTTAAA+AGG - chr4.3:85106544-85106563 None:intergenic 25.0%
! ATAACACACTGAGAAAATTA+TGG + chr4.3:85106800-85106819 MS.gene033999:intron 25.0%
! ATCTAACCAAGATAGTAAAT+GGG + chr4.3:85107296-85107315 MS.gene033999:CDS 25.0%
! ATCTCATATATACAACACTT+TGG + chr4.3:85108282-85108301 MS.gene033999:intron 25.0%
! GTTGTAAGTTTCAATTTCTA+TGG + chr4.3:85107465-85107484 MS.gene033999:intron 25.0%
! TATGGATTTAAGCAAATCAT+GGG + chr4.3:85106818-85106837 MS.gene033999:intron 25.0%
! TCAAATAAGAGAATATACGA+AGG + chr4.3:85107868-85107887 MS.gene033999:CDS 25.0%
! TCATCAATGAAAATTGTACT+GGG - chr4.3:85108614-85108633 None:intergenic 25.0%
! TTATGGATTTAAGCAAATCA+TGG + chr4.3:85106817-85106836 MS.gene033999:intron 25.0%
! TTCATCAAAAATCCAATCAA+GGG - chr4.3:85108176-85108195 None:intergenic 25.0%
! TTCATCAATGAAAATTGTAC+TGG - chr4.3:85108615-85108634 None:intergenic 25.0%
! TTGAATCTCATATAACACTT+TGG + chr4.3:85108307-85108326 MS.gene033999:intron 25.0%
! TTTCATGTTTAATGTAATGC+AGG + chr4.3:85109191-85109210 MS.gene033999:intron 25.0%
!! AACTTAAAATACACCTTTTG+TGG + chr4.3:85106465-85106484 MS.gene033999:intron 25.0%
!! CAAAAAGAGTATAGAATGAT+GGG + chr4.3:85107679-85107698 MS.gene033999:intron 25.0%
!! TGAAATTAAGAGTATGTCTA+AGG + chr4.3:85109768-85109787 MS.gene033999:CDS 25.0%
!!! AGATAATTTTTGCTTTGGAA+AGG + chr4.3:85109329-85109348 MS.gene033999:intron 25.0%
!!! CTGTTTTTTTTTTTCTTCCA+GGG + chr4.3:85108395-85108414 MS.gene033999:intron 25.0%
!!! GGTGTATTTTAAGTTAAGAA+CGG - chr4.3:85106460-85106479 None:intergenic 25.0%
!!! TAGTTGATGTTTTAAGTTGA+TGG + chr4.3:85106641-85106660 MS.gene033999:intron 25.0%
!!! TCTGTTTTTTTTTTTCTTCC+AGG + chr4.3:85108394-85108413 MS.gene033999:intron 25.0%
!!! TTTTAAGTATGACCAAACTT+AGG + chr4.3:85106719-85106738 MS.gene033999:intron 25.0%
!!! TTTTTAACTGCTTCATTTCT+AGG + chr4.3:85108333-85108352 MS.gene033999:intron 25.0%
AAATATTCAGGCATCCATAA+GGG - chr4.3:85108018-85108037 None:intergenic 30.0%
AACGAAGATTTCGTAGAAAT+TGG - chr4.3:85107147-85107166 None:intergenic 30.0%
AAGGAAGAATTAGATGAAGT+AGG - chr4.3:85107195-85107214 None:intergenic 30.0%
AATATTGTGTTGCAGTTAGT+TGG + chr4.3:85106548-85106567 MS.gene033999:intron 30.0%
AATTTGTACTCTTTCGATAC+TGG + chr4.3:85108845-85108864 MS.gene033999:intron 30.0%
ACTGTTGTGTTGTAGTTAAT+TGG + chr4.3:85106903-85106922 MS.gene033999:intron 30.0%
ACTTCTATCATCTTCTTTGA+TGG + chr4.3:85105957-85105976 MS.gene033999:CDS 30.0%
AGTCACTAAACTTACCATAA+GGG + chr4.3:85109524-85109543 MS.gene033999:intron 30.0%
ATTCTAAACTTCAGACAAGT+AGG - chr4.3:85108086-85108105 None:intergenic 30.0%
CAAAAACTATCATGTGTGAT+GGG - chr4.3:85108691-85108710 None:intergenic 30.0%
GTTCATCAAAAATCCAATCA+AGG - chr4.3:85108177-85108196 None:intergenic 30.0%
TAGTCACTAAACTTACCATA+AGG + chr4.3:85109523-85109542 MS.gene033999:intron 30.0%
TCAAAAACTATCATGTGTGA+TGG - chr4.3:85108692-85108711 None:intergenic 30.0%
TCTTTACGACTCTCAAAATT+TGG - chr4.3:85109250-85109269 None:intergenic 30.0%
TGTGTTGTAGTTAATTGGTT+TGG + chr4.3:85106908-85106927 MS.gene033999:intron 30.0%
TTAGCATTGTAACATCAAAG+AGG + chr4.3:85106243-85106262 MS.gene033999:intron 30.0%
TTGCCAACAAAACAAAAAGT+TGG + chr4.3:85109434-85109453 MS.gene033999:intron 30.0%
! CCAAAAAGAGTATAGAATGA+TGG + chr4.3:85107678-85107697 MS.gene033999:intron 30.0%
! CCAAGACCATTACTAATTTT+CGG - chr4.3:85109009-85109028 None:intergenic 30.0%
! CCATCATTCTATACTCTTTT+TGG - chr4.3:85107681-85107700 None:intergenic 30.0%
! CCATTCTATTAAGACTTGTT+CGG + chr4.3:85108357-85108376 MS.gene033999:intron 30.0%
! GAAGTTTAGAATTCTGATTG+TGG + chr4.3:85108094-85108113 MS.gene033999:intron 30.0%
! GTACTTTTATAGAATGGTGA+TGG + chr4.3:85107832-85107851 MS.gene033999:intron 30.0%
! TAGGATTTTCAGAGAACATT+TGG - chr4.3:85108067-85108086 None:intergenic 30.0%
! TGTATCTGAGATATCTTCAA+AGG + chr4.3:85109143-85109162 MS.gene033999:intron 30.0%
!! GCTTTATTTATCAGGATTTG+AGG + chr4.3:85109404-85109423 MS.gene033999:intron 30.0%
!!! AATTAAGTGGAGTTTTGAGT+TGG + chr4.3:85106403-85106422 MS.gene033999:intron 30.0%
!!! CATTTGTTGTTTTGTCCTTA+TGG + chr4.3:85107794-85107813 MS.gene033999:intron 30.0%
!!! GTTTTAAGTTGATGGATCTT+TGG + chr4.3:85106345-85106364 MS.gene033999:intron 30.0%
!!! TTTGTCCTTATGGTTTTGAA+TGG + chr4.3:85107804-85107823 MS.gene033999:intron 30.0%
!!! TTTTGAAGAAGCATTGGTAA+AGG + chr4.3:85109825-85109844 MS.gene033999:CDS 30.0%
AAAAACACTACTTGCCTCAA+CGG - chr4.3:85109296-85109315 None:intergenic 35.0%
AACAGTGCAACAAATGAAGA+TGG + chr4.3:85108980-85108999 MS.gene033999:CDS 35.0%
AACCAAACAAAAAGCCTCTA+AGG - chr4.3:85106752-85106771 None:intergenic 35.0%
AAGGTTACCTGGAAATATTC+AGG - chr4.3:85108030-85108049 None:intergenic 35.0%
AATTGGCTGAAATGCTTGAA+AGG + chr4.3:85107902-85107921 MS.gene033999:CDS 35.0%
AGAGCATGAATCATCTAGAA+GGG + chr4.3:85108919-85108938 MS.gene033999:CDS 35.0%
AGCAACTAGATGCAGATAAA+AGG + chr4.3:85107079-85107098 MS.gene033999:CDS 35.0%
ATAAGGGCAGTTTATTGGAA+GGG + chr4.3:85109540-85109559 MS.gene033999:intron 35.0%
ATCCATTTCGCACGAATTAA+AGG - chr4.3:85107018-85107037 None:intergenic 35.0%
ATCCTTTAATTCGTGCGAAA+TGG + chr4.3:85107013-85107032 MS.gene033999:CDS 35.0%
ATGCTTCCTTAAATGGAATG+AGG + chr4.3:85109719-85109738 MS.gene033999:CDS 35.0%
ATTCATGAAACCACTTCTCA+TGG - chr4.3:85109885-85109904 None:intergenic 35.0%
ATTGGCTGAAATGCTTGAAA+GGG + chr4.3:85107903-85107922 MS.gene033999:CDS 35.0%
CAACGGTCTTCAAATTTATC+CGG - chr4.3:85109279-85109298 None:intergenic 35.0%
CAGTGTGTTATAACCACAAA+AGG - chr4.3:85106791-85106810 None:intergenic 35.0%
CCACCGAATAAATAATACGT+AGG - chr4.3:85107547-85107566 None:intergenic 35.0%
CCGAAAATTAGTAATGGTCT+TGG + chr4.3:85109006-85109025 MS.gene033999:CDS 35.0%
CCGAACAAGTCTTAATAGAA+TGG - chr4.3:85108360-85108379 None:intergenic 35.0%
CCTACGTATTATTTATTCGG+TGG + chr4.3:85107544-85107563 MS.gene033999:intron 35.0%
GAAATATTCAGGCATCCATA+AGG - chr4.3:85108019-85108038 None:intergenic 35.0%
GAAGATTTCGTAGAAATTGG+AGG - chr4.3:85107144-85107163 None:intergenic 35.0%
GAAGTAGGATACTCATCTAA+TGG - chr4.3:85107180-85107199 None:intergenic 35.0%
GAGAAGTGGTTTCATGAATT+TGG + chr4.3:85109886-85109905 MS.gene033999:CDS 35.0%
GATAAATTTGAAGACCGTTG+AGG + chr4.3:85109279-85109298 MS.gene033999:CDS 35.0%
GCAACTAGATGCAGATAAAA+GGG + chr4.3:85107080-85107099 MS.gene033999:CDS 35.0%
GCGTTTAAAGATAACCCTAT+TGG + chr4.3:85107102-85107121 MS.gene033999:CDS 35.0%
GTCTAAGGATGAGATTTCAA+AGG + chr4.3:85109783-85109802 MS.gene033999:CDS 35.0%
GTTTAATGTAATGCAGGAGA+AGG + chr4.3:85109197-85109216 MS.gene033999:intron 35.0%
TAAGGAAATGCACCTAAGTT+TGG - chr4.3:85106734-85106753 None:intergenic 35.0%
TGAATATTTCCAGGTAACCT+TGG + chr4.3:85108029-85108048 MS.gene033999:intron 35.0%
TGATGTCAACATAGATGAAG+TGG + chr4.3:85109645-85109664 MS.gene033999:CDS 35.0%
TGATTCTCTATGCAATGCTA+GGG + chr4.3:85108637-85108656 MS.gene033999:CDS 35.0%
TGCTTCTTCAAAATCACACA+TGG - chr4.3:85109818-85109837 None:intergenic 35.0%
TGGTAGCCGAAAATTAGTAA+TGG + chr4.3:85109000-85109019 MS.gene033999:CDS 35.0%
TGTTAAGAAAGCTCTTTCTG+AGG + chr4.3:85107041-85107060 MS.gene033999:CDS 35.0%
TTAACGTTTAGACCCTTGAT+TGG + chr4.3:85108161-85108180 MS.gene033999:intron 35.0%
TTACCATAAGGGCAGTTTAT+TGG + chr4.3:85109535-85109554 MS.gene033999:intron 35.0%
TTCATCTATGTTGACATCAG+CGG - chr4.3:85109644-85109663 None:intergenic 35.0%
TTGATTCTCTATGCAATGCT+AGG + chr4.3:85108636-85108655 MS.gene033999:CDS 35.0%
TTTGAATCTCGTATGATTGC+AGG + chr4.3:85106971-85106990 MS.gene033999:intron 35.0%
! AAACTTAGGTGCTTTTCGTA+TGG - chr4.3:85106518-85106537 None:intergenic 35.0%
! CGGATTATATAGTTTGTCCT+AGG + chr4.3:85108751-85108770 MS.gene033999:intron 35.0%
! TTCCTTAGAGGCTTTTTGTT+TGG + chr4.3:85106747-85106766 MS.gene033999:intron 35.0%
!! CTGCTACTTTAGCTTCTAAA+TGG + chr4.3:85108531-85108550 MS.gene033999:CDS 35.0%
!! GTGTGATTTTGAAGAAGCAT+TGG + chr4.3:85109819-85109838 MS.gene033999:CDS 35.0%
!! TCTTCTTCTTCTTGACTTGT+TGG + chr4.3:85108812-85108831 MS.gene033999:intron 35.0%
!! TTCTATTTCATAAGGGCATC+TGG + chr4.3:85108896-85108915 MS.gene033999:intron 35.0%
!!! ACGCCAACTTTTTGTTTTGT+TGG - chr4.3:85109440-85109459 None:intergenic 35.0%
AAACTACCCAAACAGTAGTC+AGG - chr4.3:85107756-85107775 None:intergenic 40.0%
AAAGCAGTTGCTACTGAATG+TGG + chr4.3:85108485-85108504 MS.gene033999:CDS 40.0%
AACATAAGGACACCTTTCCA+AGG - chr4.3:85108431-85108450 None:intergenic 40.0%
AACTACCCAAACAGTAGTCA+GGG - chr4.3:85107755-85107774 None:intergenic 40.0%
AAGCAGTTGCTACTGAATGT+GGG + chr4.3:85108486-85108505 MS.gene033999:CDS 40.0%
ACAAAGACAACAAGTACCAC+TGG + chr4.3:85107333-85107352 MS.gene033999:CDS 40.0%
ACTTAGGTGCATTTCCTTAG+AGG + chr4.3:85106735-85106754 MS.gene033999:intron 40.0%
AGAGATACTAGTAGAAGACC+CGG + chr4.3:85107246-85107265 MS.gene033999:CDS 40.0%
ATATTGAACGCCATGAGAAG+TGG + chr4.3:85109872-85109891 MS.gene033999:CDS 40.0%
ATGGATGCCTGAATATTTCC+AGG + chr4.3:85108020-85108039 MS.gene033999:CDS 40.0%
ATTCTCTATGCAATGCTAGG+GGG + chr4.3:85108639-85108658 MS.gene033999:CDS 40.0%
CAAGCATTTCAGCCAATTCA+GGG - chr4.3:85107900-85107919 None:intergenic 40.0%
CATAAGGGCAGTTTATTGGA+AGG + chr4.3:85109539-85109558 MS.gene033999:intron 40.0%
CGACTCTCAAAATTTGGAAG+AGG - chr4.3:85109244-85109263 None:intergenic 40.0%
CTTATCCCTGACTACTGTTT+GGG + chr4.3:85107747-85107766 MS.gene033999:intron 40.0%
CTTCCAATAAACTGCCCTTA+TGG - chr4.3:85109541-85109560 None:intergenic 40.0%
CTTCTACTAGTATCTCTGCT+AGG - chr4.3:85107243-85107262 None:intergenic 40.0%
CTTTCGCCTCATTCCATTTA+AGG - chr4.3:85109728-85109747 None:intergenic 40.0%
GATTCTCTATGCAATGCTAG+GGG + chr4.3:85108638-85108657 MS.gene033999:CDS 40.0%
GGAATTAGAAGACCTTGGAA+AGG + chr4.3:85108416-85108435 MS.gene033999:CDS 40.0%
TAAGGGCAGTTTATTGGAAG+GGG + chr4.3:85109541-85109560 MS.gene033999:intron 40.0%
TAATGAACTGGACACAACCT+AGG - chr4.3:85108771-85108790 None:intergenic 40.0%
TCAAAATCACACATGGCAAC+AGG - chr4.3:85109811-85109830 None:intergenic 40.0%
TCAAGCATTTCAGCCAATTC+AGG - chr4.3:85107901-85107920 None:intergenic 40.0%
TGATCGTATCATCTTGCATC+AGG + chr4.3:85109615-85109634 MS.gene033999:intron 40.0%
TGTCGTGATGCTTCCTTAAA+TGG + chr4.3:85109712-85109731 MS.gene033999:CDS 40.0%
! ACTTTAGCTTCTAAATGGCG+TGG + chr4.3:85108536-85108555 MS.gene033999:CDS 40.0%
! AGAGTCGTAAAGAGTTGATC+CGG + chr4.3:85109257-85109276 MS.gene033999:CDS 40.0%
! ATTTCTATGGAGCATTCTGC+TGG + chr4.3:85107478-85107497 MS.gene033999:intron 40.0%
! GAGAGCATGAATCATCTAGA+AGG + chr4.3:85108918-85108937 MS.gene033999:CDS 40.0%
! GAGGCACTAAGGTTTGTATT+TGG + chr4.3:85109058-85109077 MS.gene033999:intron 40.0%
! TTTGGAGTGAGAATTGTCCA+AGG - chr4.3:85108049-85108068 None:intergenic 40.0%
!! AGAATGATGGGCTTTATGAG+AGG + chr4.3:85107691-85107710 MS.gene033999:intron 40.0%
!! AGAATGGTGATGGTGAAGAT+GGG + chr4.3:85107842-85107861 MS.gene033999:intron 40.0%
!! TAGAATGGTGATGGTGAAGA+TGG + chr4.3:85107841-85107860 MS.gene033999:intron 40.0%
!! TGGAAAGGTGTCCTTATGTT+TGG + chr4.3:85108431-85108450 MS.gene033999:CDS 40.0%
AAGGGTGAAGTCTGAACTTC+TGG + chr4.3:85108937-85108956 MS.gene033999:CDS 45.0%
AATGTAATGCAGGAGAAGGC+TGG + chr4.3:85109201-85109220 MS.gene033999:intron 45.0%
ATACTAGTAGAAGACCCGGA+AGG + chr4.3:85107250-85107269 MS.gene033999:CDS 45.0%
ATTTCAGCCAATTCAGGGTC+AGG - chr4.3:85107895-85107914 None:intergenic 45.0%
CTACTAGCAGGACTAACTCA+GGG + chr4.3:85107379-85107398 MS.gene033999:CDS 45.0%
CTACTAGTATCTCTGCTAGG+TGG - chr4.3:85107240-85107259 None:intergenic 45.0%
CTCGAGCCCATTTACTATCT+TGG - chr4.3:85107305-85107324 None:intergenic 45.0%
GAGAATTGTCCAAGGTTACC+TGG - chr4.3:85108041-85108060 None:intergenic 45.0%
GATGCACCACCTTTCTTTAC+CGG - chr4.3:85107420-85107439 None:intergenic 45.0%
GATGTGTTAGAAACCTCTCC+TGG + chr4.3:85107925-85107944 MS.gene033999:CDS 45.0%
GCAAGAGATTACGCTCTTGA+AGG + chr4.3:85105924-85105943 MS.gene033999:CDS 45.0%
GCTTATCCCTGACTACTGTT+TGG + chr4.3:85107746-85107765 MS.gene033999:intron 45.0%
GGATCAACTCCGGTAAAGAA+AGG + chr4.3:85107408-85107427 MS.gene033999:CDS 45.0%
GTAAAGAAAGGTGGTGCATC+TGG + chr4.3:85107420-85107439 MS.gene033999:CDS 45.0%
TACTAGCAGGACTAACTCAG+GGG + chr4.3:85107380-85107399 MS.gene033999:CDS 45.0%
TACTAGTAGAAGACCCGGAA+GGG + chr4.3:85107251-85107270 MS.gene033999:CDS 45.0%
TAGAAATTGGAGGCGATGGA+GGG - chr4.3:85107134-85107153 None:intergenic 45.0%
TCAACTCCGGTAAAGAAAGG+TGG + chr4.3:85107411-85107430 MS.gene033999:CDS 45.0%
TCCAAGGTCTTCTAATTCCC+TGG - chr4.3:85108415-85108434 None:intergenic 45.0%
TCCAGGGAATTAGAAGACCT+TGG + chr4.3:85108411-85108430 MS.gene033999:intron 45.0%
TCGTATCATCTTGCATCAGG+TGG + chr4.3:85109618-85109637 MS.gene033999:intron 45.0%
TTCCAGGAGGACCAAACATA+AGG - chr4.3:85108445-85108464 None:intergenic 45.0%
TTCGTAGAAATTGGAGGCGA+TGG - chr4.3:85107138-85107157 None:intergenic 45.0%
! CAAGATAGTAAATGGGCTCG+AGG + chr4.3:85107303-85107322 MS.gene033999:CDS 45.0%
! CATCCATAAGGGAAGCACAA+CGG - chr4.3:85108007-85108026 None:intergenic 45.0%
! GTGCTGTTGCACAAATCAAC+AGG + chr4.3:85105979-85105998 MS.gene033999:CDS 45.0%
! TCTTTACCGGAGTTGATCCT+CGG - chr4.3:85107407-85107426 None:intergenic 45.0%
!! AGAAGTGTCTTTCCAGTTCC+AGG - chr4.3:85108461-85108480 None:intergenic 45.0%
!! GAACTTCTGGTTCAGGTTGA+TGG + chr4.3:85108950-85108969 MS.gene033999:CDS 45.0%
!! GAAGTCTGAACTTCTGGTTC+AGG + chr4.3:85108943-85108962 MS.gene033999:CDS 45.0%
AAACCTCTCCTGGAGTGAGA+TGG + chr4.3:85107935-85107954 MS.gene033999:CDS 50.0%
AACCTCTCCTGGAGTGAGAT+GGG + chr4.3:85107936-85107955 MS.gene033999:CDS 50.0%
AAGCCGTTGTGCTTCCCTTA+TGG + chr4.3:85108001-85108020 MS.gene033999:CDS 50.0%
ACATCATCCCATCTCACTCC+AGG - chr4.3:85107946-85107965 None:intergenic 50.0%
ACTAGTAGAAGACCCGGAAG+GGG + chr4.3:85107252-85107271 MS.gene033999:CDS 50.0%
AGTGCCTCATCTATGTCCCA+TGG - chr4.3:85109046-85109065 None:intergenic 50.0%
AGTGTCTTTCCAGTTCCAGG+AGG - chr4.3:85108458-85108477 None:intergenic 50.0%
ATGTTTGGTCCTCCTGGAAC+TGG + chr4.3:85108446-85108465 MS.gene033999:CDS 50.0%
CAATGAAGAACCACCACCAC+CGG - chr4.3:85105877-85105896 None:intergenic 50.0%
CGTCGAACTGATGGCTATAG+TGG + chr4.3:85109670-85109689 MS.gene033999:CDS 50.0%
CTTCCCATGGGACATAGATG+AGG + chr4.3:85109039-85109058 MS.gene033999:CDS 50.0%
GAGAAAGTGAGCGAATGGTG+CGG + chr4.3:85108558-85108577 MS.gene033999:CDS 50.0%
GCTACTAGCAGGACTAACTC+AGG + chr4.3:85107378-85107397 MS.gene033999:CDS 50.0%
GGAATGAGGCGAAAGATAGC+AGG + chr4.3:85109733-85109752 MS.gene033999:CDS 50.0%
GGCAGCTACTAACTTCCCAT+GGG + chr4.3:85109027-85109046 MS.gene033999:CDS 50.0%
GTAGAAATTGGAGGCGATGG+AGG - chr4.3:85107135-85107154 None:intergenic 50.0%
GTCCTTATGTTTGGTCCTCC+TGG + chr4.3:85108440-85108459 MS.gene033999:CDS 50.0%
GTGAGATGGGATGATGTTGC+AGG + chr4.3:85107949-85107968 MS.gene033999:CDS 50.0%
GTGCCTCATCTATGTCCCAT+GGG - chr4.3:85109045-85109064 None:intergenic 50.0%
TGGCAGCTACTAACTTCCCA+TGG + chr4.3:85109026-85109045 MS.gene033999:CDS 50.0%
! AACCACGCGAAAAGCACGTA+AGG + chr4.3:85106854-85106873 MS.gene033999:intron 50.0%
! CTTTACCGGAGTTGATCCTC+GGG - chr4.3:85107406-85107425 None:intergenic 50.0%
! GGGACATAGATGAGGCACTA+AGG + chr4.3:85109047-85109066 MS.gene033999:CDS 50.0%
! GGTCCAACGAAGTGTTTCTC+CGG + chr4.3:85109846-85109865 MS.gene033999:CDS 50.0%
! TTCCTTACGTGCTTTTCGCG+TGG - chr4.3:85106859-85106878 None:intergenic 50.0%
!! ATGGAGGGCGTCTTCCAATA+GGG - chr4.3:85107119-85107138 None:intergenic 50.0%
!! GGAAGCATCACGACAGACAT+TGG - chr4.3:85109707-85109726 None:intergenic 50.0%
ACAACAAGTACCACTGGCCG+TGG + chr4.3:85107339-85107358 MS.gene033999:CDS 55.0%
ATCCCATCTCACTCCAGGAG+AGG - chr4.3:85107941-85107960 None:intergenic 55.0%
CGAAGGTCCTGACCCTGAAT+TGG + chr4.3:85107885-85107904 MS.gene033999:CDS 55.0%
GAAGTGGCTCGTCGAACTGA+TGG + chr4.3:85109661-85109680 MS.gene033999:CDS 55.0%
GCGTGGAGAAAGTGAGCGAA+TGG + chr4.3:85108553-85108572 MS.gene033999:CDS 55.0%
! GGTGGTGGTTCTTCATTGGC+AGG + chr4.3:85105879-85105898 MS.gene033999:CDS 55.0%
!! CGGTGGTGGTGGTTCTTCAT+TGG + chr4.3:85105875-85105894 MS.gene033999:CDS 55.0%
!! GATGGAGGGCGTCTTCCAAT+AGG - chr4.3:85107120-85107139 None:intergenic 55.0%
ACCCACTTGACCACCCCTTC+CGG - chr4.3:85107268-85107287 None:intergenic 60.0%
AGTAGAAGACCCGGAAGGGG+TGG + chr4.3:85107255-85107274 MS.gene033999:CDS 60.0%
CCACACGTCGGGATCATCGA+AGG - chr4.3:85107214-85107233 None:intergenic 60.0%
CCTTCGATGATCCCGACGTG+TGG + chr4.3:85107211-85107230 MS.gene033999:CDS 60.0%
TCGATGATCCCGACGTGTGG+AGG + chr4.3:85107214-85107233 MS.gene033999:CDS 60.0%
!! AGGCTGGTGGTGCTACTAGC+AGG + chr4.3:85107367-85107386 MS.gene033999:CDS 60.0%
ACCCGGAAGGGGTGGTCAAG+TGG + chr4.3:85107263-85107282 MS.gene033999:CDS 65.0%
AGGACTAACTCAGGGGCCCG+AGG + chr4.3:85107387-85107406 MS.gene033999:CDS 65.0%
AGGGGCCCGAGGATCAACTC+CGG + chr4.3:85107398-85107417 MS.gene033999:CDS 65.0%
CACCACCAGCCTTTGCGCCA+CGG - chr4.3:85107359-85107378 None:intergenic 65.0%
CCCACTTGACCACCCCTTCC+GGG - chr4.3:85107267-85107286 None:intergenic 65.0%
CCCGGAAGGGGTGGTCAAGT+GGG + chr4.3:85107264-85107283 MS.gene033999:CDS 65.0%
CTAGGTGGCCTCCACACGTC+GGG - chr4.3:85107225-85107244 None:intergenic 65.0%
GCTAGGTGGCCTCCACACGT+CGG - chr4.3:85107226-85107245 None:intergenic 65.0%
TACCACTGGCCGTGGCGCAA+AGG + chr4.3:85107347-85107366 MS.gene033999:CDS 65.0%
ACTGGCCGTGGCGCAAAGGC+TGG + chr4.3:85107351-85107370 MS.gene033999:CDS 70.0%
AGCCTTTGCGCCACGGCCAG+TGG - chr4.3:85107352-85107371 None:intergenic 70.0%
GGCCGTGGCGCAAAGGCTGG+TGG + chr4.3:85107354-85107373 MS.gene033999:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 85105870 85109918 85105870 ID=MS.gene033999
chr4.3 mRNA 85105870 85109918 85105870 ID=MS.gene033999.t1;Parent=MS.gene033999
chr4.3 exon 85105870 85106000 85105870 ID=MS.gene033999.t1.exon1;Parent=MS.gene033999.t1
chr4.3 CDS 85105870 85106000 85105870 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85106993 85107467 85106993 ID=MS.gene033999.t1.exon2;Parent=MS.gene033999.t1
chr4.3 CDS 85106993 85107467 85106993 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85107844 85108041 85107844 ID=MS.gene033999.t1.exon3;Parent=MS.gene033999.t1
chr4.3 CDS 85107844 85108041 85107844 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85108416 85108660 85108416 ID=MS.gene033999.t1.exon4;Parent=MS.gene033999.t1
chr4.3 CDS 85108416 85108660 85108416 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85108910 85109068 85108910 ID=MS.gene033999.t1.exon5;Parent=MS.gene033999.t1
chr4.3 CDS 85108910 85109068 85108910 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85109213 85109300 85109213 ID=MS.gene033999.t1.exon6;Parent=MS.gene033999.t1
chr4.3 CDS 85109213 85109300 85109213 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
chr4.3 exon 85109637 85109918 85109637 ID=MS.gene033999.t1.exon7;Parent=MS.gene033999.t1
chr4.3 CDS 85109637 85109918 85109637 ID=cds.MS.gene033999.t1;Parent=MS.gene033999.t1
Gene Sequence

>MS.gene033999

ATGGCCGGTGGTGGTGGTTCTTCATTGGCAGGTTTGCAAGATCATGTGAAGTTAGCAAGAGATTACGCTCTTGAAGGTCTCTATGATACTTCTATCATCTTCTTTGATGGTGCTGTTGCACAAATCAACAGGTTCTTTACTCTTCTTTTTTCCTTTTTATTCTAAAGTTTGTTCTTTTACTTCATTTTAAATAATGGGTTTTGATTATTTTTGTATTTTGAGTAATTTTTGACACTACCCATTAATTATTTTGATGTGTGTTTCCCATTTTCATTGTAAAGTTTGTTTTTTGTTTCATTATAAATAATGGGTTGAAATTGTTTTTGCATTTTGACATTACCCATTTAATTATTTTGATGTTTTTTATATGAAATTAGCATTGTAACATCAAAGAGGAAAAAATGATTCACAATTGACTTGATTCATGAATGAGATGTTAGAATTCTTTGTATGTTGAATGATGACAGTAATTGAAGTTTTAAGTTGATGGATCTTTGGTTGTTTGATTATAATCAGCAACATTTCTTGATATGAATTAAGTGGAGTTTTGAGTTGGAAATTTTTTAGATGCATTTCTGATTTTCGTACCGTTCTTAACTTAAAATACACCTTTTGTGGTTATAATAAACTATGAGTAGTTAAGAACCATACGAAAAGCACCTAAGTTTTATCCTTTTAAATATTGTGTTGCAGTTAGTTGGTTTGCTATTCTGTCAAGTAGTTGATGAGATGTTAGAACTTAGAGCTATTTTTTGTATTGAATTATAACAGTAGTTGATGTTTTAAGTTGATGGATCTTTCGACTTTTGATTATAGTTAGTAACATTTCTTGATATCAATCAATTGGAGTTTTAAGTATGACCAAACTTAGGTGCATTTCCTTAGAGGCTTTTTGTTTGGTTCTTAACTTAAAATACACCTTTTGTGGTTATAACACACTGAGAAAATTATGGATTTAAGCAAATCATGGGTAGTTAAGTTAAGAACCACGCGAAAAGCACGTAAGGAAATGCATCTAAGTTTTATAGTTTTAACTGTTGTGTTGTAGTTAATTGGTTTGGTTAATGTGCCCTAGATTTGTGTTGTATTTAATTGAAGAAGTTTGAATCTCGTATGATTGCAGGCATCTAAACAGTGTTGATGATCCTTTAATTCGTGCGAAATGGATGAATGTTAAGAAAGCTCTTTCTGAGGAAACTGAAGTTGTAAAGCAACTAGATGCAGATAAAAGGGCGTTTAAAGATAACCCTATTGGAAGACGCCCTCCATCGCCTCCAATTTCTACGAAATCTTCGTTTGTTTTTCAGCCATTAGATGAGTATCCTACTTCATCTAATTCTTCCTTCGATGATCCCGACGTGTGGAGGCCACCTAGCAGAGATACTAGTAGAAGACCCGGAAGGGGTGGTCAAGTGGGTACTCGCAAATCTAACCAAGATAGTAAATGGGCTCGAGGTGCTACGACAAAGACAACAAGTACCACTGGCCGTGGCGCAAAGGCTGGTGGTGCTACTAGCAGGACTAACTCAGGGGCCCGAGGATCAACTCCGGTAAAGAAAGGTGGTGCATCTGGAAAGTCTAGCAACACAGATGCAGTTGTAAGTTTCAATTTCTATGGAGCATTCTGCTGGACTACATTTTCTTTATCACATTTTGTTGTTACAAGAAGTTATTCCTACGTATTATTTATTCGGTGGACTCAACAAAATATTAACTATGTGTATGATCCTACAGAATCATAATTGAATAAGTTCTTCTGAGCATTTTGCTTTTTTTTATTTTTTGCTCTATTTACTTTACTTTCTGATCCAAAAAGAGTATAGAATGATGGGCTTTATGAGAGGTTTCTGACACACTGCAGCATCTCTGATTATAAGCTTATCCCTGACTACTGTTTGGGTAGTTTGAAAAAACATCAAACTTGCATTTGTTGTTTTGTCCTTATGGTTTTGAATGGTATTTGTACTTTTATAGAATGGTGATGGTGAAGATGGGAAGTCAAATAAGAGAATATACGAAGGTCCTGACCCTGAATTGGCTGAAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTGAGATGGGATGATGTTGCAGGTCTTACTGAAGCAAAAAGACTCTTAGAAGAAGCCGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGTAACCTTGGACAATTCTCACTCCAAATGTTCTCTGAAAATCCTACTTGTCTGAAGTTTAGAATTCTGATTGTGGTTTATTTGTACGAGACTGTGTAATTGTTATCATGATAGTTAGTTTTAACGTTTAGACCCTTGATTGGATTTTTGATGAACAGATCTTGCATATATTTACTTTGCAACTAAGACCGATTTATGAAATTATTATTGCTAATAGGTTCATGCTTCTCTTGTTACATGAATCTCATATATACAACACTTTGGTTTTGAATCTCATATAACACTTTGGTTTTTTTTAACTGCTTCATTTCTAGGTCCATTCTATTAAGACTTGTTCGGTTGAGCTCATTATTTCTGTTTTTTTTTTTCTTCCAGGGAATTAGAAGACCTTGGAAAGGTGTCCTTATGTTTGGTCCTCCTGGAACTGGAAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACAACGTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAAAGTGAGCGAATGGTGCGGTGTTTGTTTGATCTTGCTAGAGCTTATGCACCCAGTACAATTTTCATTGATGAAATTGATTCTCTATGCAATGCTAGGGGGTATGTCTATTTTTGCTCTTTTAGAATCCCATCACACATGATAGTTTTTGAAACTCATTTATATTTCTATTTCTCTAATCTTCATTAAATCGGATTATATAGTTTGTCCTAGGTTGTGTCCAGTTCATTAAGTAATAGATATATCTTTTTTTCTTCTTCTTCTTGACTTGTTGGCTTCACTTTGAATTTGTACTCTTTCGATACTGGAATTATGTCACAATTTGATTGAATTAACTTCTATTTCATAAGGGCATCTGGAGAGCATGAATCATCTAGAAGGGTGAAGTCTGAACTTCTGGTTCAGGTTGATGGTGTAAGCAACAGTGCAACAAATGAAGATGGTAGCCGAAAATTAGTAATGGTCTTGGCAGCTACTAACTTCCCATGGGACATAGATGAGGCACTAAGGTTTGTATTTGGTTTTCTGTGTTCTTTTCTGAACTATTTATATAGAAAGTGATAAAAACTTTTGGTTAGTTATCTGTATCTGAGATATCTTCAAAGGTAATAGTCTACACTTTCTGATCCGATTTCATGTTTAATGTAATGCAGGAGAAGGCTGGAAAAGAGAATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGTTGATCCGGATAAATTTGAAGACCGTTGAGGCAAGTAGTGTTTTTTCATTATTTTCTTAGATAATTTTTGCTTTGGAAAGGTGTACCGATTTTCTACTATAAATATCATAAATTATAGTACATTATGTTTAAAGCTTTATTTATCAGGATTTGAGGATTAAAATTGCCAACAAAACAAAAAGTTGGCGTTGAGCATTTAACAAGATAGTAATATTCTTTTGTGAATGTTTTTATTTTATTGGAGTTGTTGATTAGTCACTAAACTTACCATAAGGGCAGTTTATTGGAAGGGGTGCAGATTCACTTATGCTAAAACAATAAAACTTGATTTTTATATTTATAACTGATCGTATCATCTTGCATCAGGTGGCCGCTGATGTCAACATAGATGAAGTGGCTCGTCGAACTGATGGCTATAGTGGAGATGATTTGACCAATGTCTGTCGTGATGCTTCCTTAAATGGAATGAGGCGAAAGATAGCAGGAAAGACTCGCGATGAAATTAAGAGTATGTCTAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCATTGGTAAAGGTCCAACGAAGTGTTTCTCCGGCTGATATTGAACGCCATGAGAAGTGGTTTCATGAATTTGGATCAGCATAA
Protein sequence

>MS.gene033999.t1

MAGGGGSSLAGLQDHVKLARDYALEGLYDTSIIFFDGAVAQINRHLNSVDDPLIRAKWMNVKKALSEETEVVKQLDADKRAFKDNPIGRRPPSPPISTKSSFVFQPLDEYPTSSNSSFDDPDVWRPPSRDTSRRPGRGGQVGTRKSNQDSKWARGATTKTTSTTGRGAKAGGATSRTNSGARGSTPVKKGGASGKSSNTDAVNGDGEDGKSNKRIYEGPDPELAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKLVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKDEISKDPVAMCDFEEALVKVQRSVSPADIERHEKWFHEFGSA