AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038038.t1 MTR_1g069345 96.443 506 17 1 3 507 2 507 0.0 1005
MS.gene038038.t1 MTR_5g090420 48.096 499 253 3 9 504 54 549 1.19e-156 458
MS.gene038038.t1 MTR_3g449990 46.548 507 260 4 7 504 52 556 8.83e-156 456
MS.gene038038.t1 MTR_1g072140 30.592 304 199 8 205 503 16 312 1.87e-34 132
MS.gene038038.t1 MTR_4g119620 31.731 312 194 11 205 503 16 321 1.98e-33 129
MS.gene038038.t1 MTR_8g092620 26.073 303 214 8 202 503 4 297 7.35e-22 96.3
MS.gene038038.t1 MTR_3g449950 35.028 177 107 1 8 176 46 222 9.86e-21 93.2
MS.gene038038.t1 MTR_7g086360 26.059 307 198 10 211 502 50 342 2.17e-20 92.8
MS.gene038038.t1 MTR_8g092620 25.249 301 215 7 202 501 11 302 5.62e-20 91.3
MS.gene038038.t1 MTR_4g102520 25.325 308 215 10 205 503 283 584 2.98e-16 82.0
MS.gene038038.t1 MTR_1g097140 24.776 335 204 12 210 503 74 401 6.80e-15 77.0
MS.gene038038.t1 MTR_4g105700 24.375 320 196 8 224 503 162 475 1.12e-14 77.4
MS.gene038038.t1 MTR_6g004040 29.870 154 103 2 210 363 95 243 1.89e-14 76.6
MS.gene038038.t1 MTR_3g052220 21.143 525 362 19 16 505 6 513 4.51e-13 72.0
MS.gene038038.t1 MTR_8g467040 23.975 317 220 10 202 503 105 415 2.31e-12 69.3
MS.gene038038.t1 MTR_5g022690 22.744 277 193 6 243 503 162 433 5.35e-12 68.6
MS.gene038038.t1 MTR_4g095058 32.192 146 84 5 209 344 404 544 8.45e-12 67.8
MS.gene038038.t1 MTR_4g095058 32.192 146 84 5 209 344 406 546 8.63e-12 67.8
MS.gene038038.t1 MTR_3g106080 34.711 121 72 4 214 333 459 573 1.38e-11 67.4
MS.gene038038.t1 MTR_1g072740 25.391 256 178 8 204 451 281 531 4.29e-11 65.9
MS.gene038038.t1 MTR_2g012630 28.205 156 105 4 210 364 94 243 7.62e-11 65.5
MS.gene038038.t1 MTR_2g012630 28.205 156 105 4 210 364 94 243 8.63e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038038.t1 AT5G43920 64.833 509 168 3 8 505 7 515 0.0 698
MS.gene038038.t1 AT5G08560 46.457 508 259 4 8 504 55 560 3.00e-161 470
MS.gene038038.t1 AT5G08560 46.457 508 259 4 8 504 55 560 3.00e-161 470
MS.gene038038.t1 AT5G08560 46.457 508 259 4 8 504 55 560 3.00e-161 470
MS.gene038038.t1 AT3G49660 32.248 307 193 11 205 503 13 312 2.43e-32 126
MS.gene038038.t1 AT4G02730 30.619 307 196 11 205 503 32 329 2.07e-26 110
MS.gene038038.t1 AT5G64730 27.152 302 210 7 203 503 5 297 4.48e-24 102
MS.gene038038.t1 AT2G43770 24.194 310 200 11 211 502 48 340 3.85e-20 92.0
MS.gene038038.t1 AT1G10580 26.059 307 214 8 205 503 271 572 2.31e-18 88.6
MS.gene038038.t1 AT5G08390 30.519 154 102 2 210 363 95 243 1.37e-14 77.0
MS.gene038038.t1 AT3G27640 23.611 288 173 10 259 503 126 409 1.06e-13 73.9
MS.gene038038.t1 AT3G27640 23.529 289 174 10 259 504 107 391 1.14e-13 73.9
MS.gene038038.t1 AT5G56130 23.179 302 210 8 204 497 8 295 1.32e-13 72.4
MS.gene038038.t1 AT1G73720 21.195 519 368 15 16 505 5 511 1.93e-13 73.2
MS.gene038038.t1 AT2G41500 24.621 264 189 6 243 503 237 493 4.14e-13 72.0
MS.gene038038.t1 AT2G41500 24.621 264 189 6 243 503 237 493 4.14e-13 72.0
MS.gene038038.t1 AT5G54520 25.723 311 204 11 203 495 147 448 1.01e-12 70.5
MS.gene038038.t1 AT5G25150 35.833 120 72 2 214 333 458 572 1.84e-12 70.1
MS.gene038038.t1 AT5G25150 25.701 214 150 5 211 421 413 620 3.31e-11 66.2
MS.gene038038.t1 AT5G25150 35.833 120 72 2 214 333 458 572 1.87e-12 70.1
MS.gene038038.t1 AT5G25150 25.701 214 150 5 211 421 413 620 3.44e-11 66.2
MS.gene038038.t1 AT5G23430 27.922 154 106 2 210 363 95 243 2.86e-12 69.7
MS.gene038038.t1 AT5G23430 27.922 154 106 2 210 363 95 243 2.93e-12 69.7
MS.gene038038.t1 AT5G23430 27.922 154 106 2 210 363 95 243 2.93e-12 69.7
MS.gene038038.t1 AT5G67320 24.519 208 110 4 212 373 361 567 5.12e-12 68.9
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 518 786 1.49e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 518 786 1.49e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 518 786 1.49e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 518 786 1.49e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 518 786 1.49e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 537 805 1.61e-11 67.4
MS.gene038038.t1 AT2G32700 23.158 285 198 12 224 503 516 784 1.78e-11 67.4
MS.gene038038.t1 AT1G11160 28.302 159 109 2 210 368 52 205 1.84e-11 67.4
MS.gene038038.t1 AT1G11160 28.302 159 109 2 210 368 94 247 1.85e-11 67.4
MS.gene038038.t1 AT1G11160 28.302 159 109 2 210 368 94 247 1.90e-11 67.4
MS.gene038038.t1 AT1G11160 28.302 159 109 2 210 368 94 247 1.94e-11 67.4
MS.gene038038.t1 AT1G61210 28.302 159 109 2 210 368 94 247 2.25e-11 67.0
MS.gene038038.t1 AT1G61210 28.302 159 109 2 210 368 94 247 3.03e-11 66.6
MS.gene038038.t1 AT1G61210 28.302 159 109 2 210 368 94 247 3.16e-11 66.6

Find 123 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCGTGTGGATCGGTTTA+AGG 0.154853 1.1:+50989453 MS.gene038038:CDS
CTCATGTTCTCAATGGAAAT+TGG 0.169730 1.1:+50989275 MS.gene038038:CDS
ATGATGGGGATGGTGATTTA+AGG 0.192414 1.1:+50989512 MS.gene038038:CDS
TCTTTGTTAGAATCTGAATC+TGG 0.256899 1.1:+50989214 MS.gene038038:CDS
GGGGAAGTTGTTGATGGATT+TGG 0.271980 1.1:+50989534 MS.gene038038:CDS
GTATCTAATCAGCATATTAT+TGG 0.286140 1.1:+50994357 MS.gene038038:CDS
GGATGGGAGGTTGGAGCATT+TGG 0.313462 1.1:+50989588 MS.gene038038:CDS
ATGATCATACAATTCGTATA+TGG 0.316168 1.1:+50994875 MS.gene038038:CDS
AACAGTAAGATCTACAACTT+TGG 0.350301 1.1:-50994320 None:intergenic
TCGGTTTAAGGTTCATAGTT+TGG 0.352737 1.1:+50989465 MS.gene038038:CDS
GTGTGAGTTGGAATCCTAAA+AGG 0.354015 1.1:+50994827 MS.gene038038:CDS
TACTGATTCACCGAGAATTT+CGG 0.357864 1.1:-50989329 None:intergenic
GCACCCTATCACATCCATTT+CGG 0.373837 1.1:+50994438 MS.gene038038:CDS
GGCACATGCAAGCATACATT+TGG 0.379697 1.1:+50994154 MS.gene038038:CDS
CTCCAGTCTTTATATTCATT+AGG 0.380177 1.1:+50989175 MS.gene038038:CDS
TATGATAGCTGTACAATCAT+TGG 0.395715 1.1:-50991678 None:intergenic
TTCAAATAATTGAAATTCAC+TGG 0.396303 1.1:-50989251 None:intergenic
TCTGATACACTTGGTTCAAA+AGG 0.396779 1.1:+50989118 MS.gene038038:CDS
TTGTTGTCAGCTCATGTGCC+TGG 0.397599 1.1:+50994188 MS.gene038038:CDS
TTTGAATCTCATGTTCTCAA+TGG 0.398311 1.1:+50989268 MS.gene038038:CDS
TGATCCTCATAAAGCGAAAC+AGG 0.402100 1.1:-50989667 None:intergenic
GAAACCGAAATGGATGTGAT+AGG 0.405173 1.1:-50994442 None:intergenic
CTTTGTTAGAATCTGAATCT+GGG 0.411797 1.1:+50989215 MS.gene038038:CDS
TATTATTGGATAAAGAAATT+CGG 0.420368 1.1:+50994371 MS.gene038038:CDS
TCATGTTCTCAATGGAAATT+GGG 0.422581 1.1:+50989276 MS.gene038038:CDS
CTTGCAGATGCTAACATTTG+TGG 0.423994 1.1:-50994850 None:intergenic
TCCATTTCGGTTTCTGCTGA+TGG 0.424486 1.1:+50994451 MS.gene038038:CDS
ACTATCTGATCCACCAAAAC+AGG 0.432506 1.1:-50994590 None:intergenic
TGCCCAGATAAAACCTCTAT+TGG 0.433743 1.1:-50994787 None:intergenic
TACCGGCTACGTCCCACATA+TGG 0.434480 1.1:-50994510 None:intergenic
AACAGTGCAAATATGTGATT+AGG 0.435394 1.1:+50994566 MS.gene038038:CDS
TGATCATACAATTCGTATAT+GGG 0.440898 1.1:+50994876 MS.gene038038:CDS
GAATCCTGTTTCGCTTTATG+AGG 0.441902 1.1:+50989663 MS.gene038038:CDS
AATTCCATCACCGAAATTCT+CGG 0.446088 1.1:+50989319 MS.gene038038:CDS
GTGAGCAACTTGGTGTCATC+AGG 0.450464 1.1:-50994088 None:intergenic
CACACAAATTGTGTTGAGTT+GGG 0.450918 1.1:-50994214 None:intergenic
ATGATTGTACAGCTATCATA+TGG 0.454185 1.1:+50991681 MS.gene038038:CDS
AAGCATACATTTGGGAATGA+TGG 0.454570 1.1:+50994163 MS.gene038038:CDS
TGGTGAGGATGGTTTAGCTT+TGG 0.455755 1.1:+50989405 MS.gene038038:CDS
CTGATACACTTGGTTCAAAA+GGG 0.459776 1.1:+50989119 MS.gene038038:CDS
GCCTCCGTCGATTTCAATAC+CGG 0.460349 1.1:+50989567 MS.gene038038:CDS
TCGGAGTTCAAAGCCAATAG+AGG 0.460726 1.1:+50994774 MS.gene038038:CDS
AGGTATACATCTGGAATTCT+CGG 0.461243 1.1:+50994755 MS.gene038038:intron
AAGAAGCCACTGAGGTATAC+TGG 0.462412 1.1:+50994538 MS.gene038038:CDS
ATGTCATGCAGGTATACATC+TGG 0.463142 1.1:+50994746 MS.gene038038:intron
AACTCACACAATTTACAGTC+AGG 0.464438 1.1:-50994813 None:intergenic
AAGCTGTGGGATGTTGAAAC+TGG 0.467380 1.1:+50994133 MS.gene038038:CDS
ACAGTAAGATCTACAACTTT+GGG 0.468874 1.1:-50994319 None:intergenic
TATTTGAAGCGTGGTGAGGA+TGG 0.471192 1.1:+50989394 MS.gene038038:CDS
TGAAACTACTGTAACTGCTT+GGG 0.471578 1.1:+50989612 MS.gene038038:CDS
TCATGACAGGTGCAAGAAGA+TGG 0.473179 1.1:+50994001 MS.gene038038:intron
CTGATTAGATACTCTCCGTC+TGG 0.473361 1.1:-50994346 None:intergenic
GTGGTCAATTTGAATGATGA+TGG 0.483594 1.1:+50989496 MS.gene038038:CDS
ACCATCAGCAGAAACCGAAA+TGG 0.490342 1.1:-50994452 None:intergenic
TTGTGTTGAGTTGGGAAACC+AGG 0.493030 1.1:-50994206 None:intergenic
CCATCGCTGCAGATATTGAC+TGG 0.494376 1.1:+50991593 MS.gene038038:intron
TATGTGATTAGGTCCTGTTT+TGG 0.495271 1.1:+50994577 MS.gene038038:CDS
CGTCCCACATATGGATCTCC+TGG 0.498007 1.1:-50994501 None:intergenic
TGAAATGACTCGTTCCGCAT+TGG 0.499253 1.1:-50994410 None:intergenic
TTGAAACTACTGTAACTGCT+TGG 0.503071 1.1:+50989611 MS.gene038038:CDS
GCACATGCAAGCATACATTT+GGG 0.503407 1.1:+50994155 MS.gene038038:CDS
TTCAATACCGGATGGGAGGT+TGG 0.504415 1.1:+50989579 MS.gene038038:CDS
ACACCAAGTTGCTCACTTGT+GGG 0.504463 1.1:+50994095 MS.gene038038:CDS
TGTGGGACGTAGCCGGTACA+TGG 0.507750 1.1:+50994515 MS.gene038038:CDS
TTTCTGCGTTGCGTGTGGAT+CGG 0.517617 1.1:+50989446 MS.gene038038:CDS
AACCTAATGAATATAAAGAC+TGG 0.521122 1.1:-50989177 None:intergenic
AAATGCTCCAACCTCCCATC+CGG 0.525059 1.1:-50989586 None:intergenic
TGATGGGGATGGTGATTTAA+GGG 0.534874 1.1:+50989513 MS.gene038038:CDS
GTTGCTCACTTGTGGGAACA+TGG 0.542757 1.1:+50994102 MS.gene038038:CDS
ATCCATATGTGGGACGTAGC+CGG 0.545469 1.1:+50994508 MS.gene038038:CDS
CACACCTGAGTGGTTGTAGT+AGG 0.545496 1.1:-50989712 None:intergenic
TAAGAGCATGGAGAGGAATG+AGG 0.547696 1.1:+50994293 MS.gene038038:CDS
TTTGTTAGAATCTGAATCTG+GGG 0.549343 1.1:+50989216 MS.gene038038:CDS
GATAGTACATTTATTGCCAG+TGG 0.550032 1.1:+50994607 MS.gene038038:CDS
TTCAGATTCTAACAAAGAAG+CGG 0.551222 1.1:-50989209 None:intergenic
ACGCGTTTCTGCGTTGCGTG+TGG 0.551618 1.1:+50989441 MS.gene038038:CDS
CATGACAGGTGCAAGAAGAT+GGG 0.551858 1.1:+50994002 MS.gene038038:intron
CAGTGGCTTCTTCCATGTAC+CGG 0.552345 1.1:-50994527 None:intergenic
CATTGAAACACACACTCAGC+GGG 0.556918 1.1:+50994032 MS.gene038038:CDS
GACACCAAGTTGCTCACTTG+TGG 0.557860 1.1:+50994094 MS.gene038038:CDS
TGACTGTAAATTGTGTGAGT+TGG 0.561065 1.1:+50994815 MS.gene038038:CDS
GCACACAAATTGTGTTGAGT+TGG 0.567860 1.1:-50994215 None:intergenic
AAACCGAAATGGATGTGATA+GGG 0.569486 1.1:-50994441 None:intergenic
TTTGAACCAAGTGTATCAGA+AGG 0.571167 1.1:-50989115 None:intergenic
CTGAAAAGGGCATCTGCATG+TGG 0.572336 1.1:+50994251 MS.gene038038:CDS
CTTTATGAGGATCATTCTTG+TGG 0.579816 1.1:+50989676 MS.gene038038:CDS
CATTGTCAATCTGAACAGCC+AGG 0.580347 1.1:+50994483 MS.gene038038:CDS
CCGTCGATTTCAATACCGGA+TGG 0.584628 1.1:+50989571 MS.gene038038:CDS
TGGTCAATTTGAATGATGAT+GGG 0.585416 1.1:+50989497 MS.gene038038:CDS
GTTCCCACAAGTGAGCAACT+TGG 0.587680 1.1:-50994098 None:intergenic
TTCACCGAGAATTTCGGTGA+TGG 0.589303 1.1:-50989323 None:intergenic
GTTTAGCTTTGGATGTGTTG+AGG 0.589963 1.1:+50989416 MS.gene038038:CDS
GATCTTACTGTTACTCCAGA+CGG 0.591056 1.1:+50994331 MS.gene038038:CDS
TCATAGTTTGGCTAATAGTG+TGG 0.606420 1.1:+50989477 MS.gene038038:CDS
AATAATCCTTCTGATACACT+TGG 0.609357 1.1:+50989109 MS.gene038038:CDS
ATGGAAACGAACTAAGAGCA+TGG 0.613680 1.1:+50994281 MS.gene038038:CDS
CGATTTCAATACCGGATGGG+AGG 0.614148 1.1:+50989575 MS.gene038038:CDS
TTGTACAGCTATCATATGGA+AGG 0.615144 1.1:+50991685 MS.gene038038:CDS
ATGGGGATGGTGATTTAAGG+GGG 0.615559 1.1:+50989515 MS.gene038038:CDS
CGTCGATTTCAATACCGGAT+GGG 0.620992 1.1:+50989572 MS.gene038038:CDS
GATGGGGATGGTGATTTAAG+GGG 0.624415 1.1:+50989514 MS.gene038038:CDS
GATCATACAATTCGTATATG+GGG 0.635457 1.1:+50994877 MS.gene038038:CDS
ACTCACACAATTTACAGTCA+GGG 0.642161 1.1:-50994812 None:intergenic
TGAAAAGGGCATCTGCATGT+GGG 0.642317 1.1:+50994252 MS.gene038038:CDS
ATCTGCATGTGGGATTGTGA+TGG 0.648066 1.1:+50994262 MS.gene038038:CDS
GGAGTATTTGAAGCGTGGTG+AGG 0.650464 1.1:+50989390 MS.gene038038:CDS
CAGTGGCAGTGAAAATTCAG+AGG 0.651247 1.1:+50994624 MS.gene038038:CDS
ACAGCCAGGAGATCCATATG+TGG 0.653394 1.1:+50994497 MS.gene038038:CDS
AACTCAACACAATTTGTGTG+CGG 0.654042 1.1:+50994217 MS.gene038038:CDS
CAGCCAGGAGATCCATATGT+GGG 0.654626 1.1:+50994498 MS.gene038038:CDS
TTTACATTTGGCAACCAATG+CGG 0.654902 1.1:+50994396 MS.gene038038:CDS
TTGTGACCAGTATACCTCAG+TGG 0.655395 1.1:-50994544 None:intergenic
GTTTCCTACTACAACCACTC+AGG 0.661809 1.1:+50989708 MS.gene038038:CDS
GTTATGGAGTATTTGAAGCG+TGG 0.666506 1.1:+50989385 MS.gene038038:CDS
AACGAACTAAGAGCATGGAG+AGG 0.668734 1.1:+50994286 MS.gene038038:CDS
TGCGGAACGAGTCATTTCAG+AGG 0.674288 1.1:+50994414 MS.gene038038:CDS
CCATCCGGTATTGAAATCGA+CGG 0.682456 1.1:-50989571 None:intergenic
ACATTGAAACACACACTCAG+CGG 0.684546 1.1:+50994031 MS.gene038038:CDS
AAATAGTCCCCACACCTGAG+TGG 0.685449 1.1:-50989722 None:intergenic
GGTCAATTTGAATGATGATG+GGG 0.694066 1.1:+50989498 MS.gene038038:CDS
TCCGGTATTGAAATCGACGG+AGG 0.704177 1.1:-50989568 None:intergenic
AATTTGAATGATGATGGGGA+TGG 0.732905 1.1:+50989502 MS.gene038038:CDS
GTACATGGAAGAAGCCACTG+AGG 0.776918 1.1:+50994530 MS.gene038038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATACACATTTATATA+TGG + chr1.1:50991948-50991967 MS.gene038038:intron 10.0%
!! TAATATACACATTTATATAT+GGG + chr1.1:50991949-50991968 MS.gene038038:intron 10.0%
!! AAAAAGAAAGACAATTATAT+TGG - chr1.1:50991764-50991783 None:intergenic 15.0%
!! TATTATTGGATAAAGAAATT+CGG + chr1.1:50994371-50994390 MS.gene038038:CDS 15.0%
!! TTAATTAATACACTTAAGAA+TGG - chr1.1:50994656-50994675 None:intergenic 15.0%
!! TTGTACAAAAGTAATTTATT+TGG + chr1.1:50989817-50989836 MS.gene038038:intron 15.0%
!! TTTATATATTAAACTTCTTC+CGG + chr1.1:50993641-50993660 MS.gene038038:intron 15.0%
!!! ATATATGTTTTGATATCTTT+CGG + chr1.1:50993724-50993743 MS.gene038038:intron 15.0%
!!! ATTCCATAATTTTTCTTAAA+CGG - chr1.1:50990034-50990053 None:intergenic 15.0%
!!! TAATAAAAAGTTCACATTTT+AGG + chr1.1:50992191-50992210 MS.gene038038:intron 15.0%
!!! TTTATTTTTCTTACGTAATA+AGG + chr1.1:50991280-50991299 MS.gene038038:intron 15.0%
!! AACTTAAAAATTCGTTGAAT+TGG - chr1.1:50993513-50993532 None:intergenic 20.0%
!! AATTAGTTAAAGGAAACAAA+AGG + chr1.1:50992585-50992604 MS.gene038038:intron 20.0%
!! AGTGAATGAATAAATAATGA+TGG + chr1.1:50992802-50992821 MS.gene038038:intron 20.0%
!! ATAATTAATATCTTGCCATA+TGG - chr1.1:50991439-50991458 None:intergenic 20.0%
!! ATATCGAAAGATAAAAGAAT+AGG + chr1.1:50992451-50992470 MS.gene038038:intron 20.0%
!! ATCATTATATACCATAGAAA+GGG + chr1.1:50990321-50990340 MS.gene038038:intron 20.0%
!! TAAAAACTAGAAGATTAACT+TGG - chr1.1:50991524-50991543 None:intergenic 20.0%
!! TACAGACATAATATTAGAAA+AGG - chr1.1:50990199-50990218 None:intergenic 20.0%
!! TTATAGAATACAGAAATCAT+TGG - chr1.1:50989995-50990014 None:intergenic 20.0%
!! TTCAAATAATTGAAATTCAC+TGG - chr1.1:50989254-50989273 None:intergenic 20.0%
!!! AATGTGAACTTTTTATTACA+CGG - chr1.1:50992189-50992208 None:intergenic 20.0%
!!! ATAATTGTCTTTCTTTTTCT+TGG + chr1.1:50991766-50991785 MS.gene038038:intron 20.0%
!!! ATCATTGGTTAAATGAAATA+TGG - chr1.1:50989980-50989999 None:intergenic 20.0%
!!! GGCAAGATATTAATTATTTT+GGG + chr1.1:50991442-50991461 MS.gene038038:intron 20.0%
!!! TGGCAAGATATTAATTATTT+TGG + chr1.1:50991441-50991460 MS.gene038038:intron 20.0%
!!! TTCCATAATTTTTCTTAAAC+GGG - chr1.1:50990033-50990052 None:intergenic 20.0%
!!! TTTTCTAGTTTATACACAAT+TGG - chr1.1:50990379-50990398 None:intergenic 20.0%
! AAAGATAAGCAATGAAAGAA+AGG - chr1.1:50991096-50991115 None:intergenic 25.0%
! AACCTAATGAATATAAAGAC+TGG - chr1.1:50989180-50989199 None:intergenic 25.0%
! AAGAAAAATTATGGAATCAC+TGG + chr1.1:50990037-50990056 MS.gene038038:intron 25.0%
! AAGATGAAAGTGATACAAAT+GGG - chr1.1:50990995-50991014 None:intergenic 25.0%
! ACTAATTCCTTTAACTAGTA+TGG + chr1.1:50991920-50991939 MS.gene038038:intron 25.0%
! ATCCATTATATGTTATTCCA+AGG - chr1.1:50992362-50992381 None:intergenic 25.0%
! ATGATCATACAATTCGTATA+TGG + chr1.1:50994875-50994894 MS.gene038038:CDS 25.0%
! ATTAGATGTTATTGCTATCA+TGG + chr1.1:50992486-50992505 MS.gene038038:intron 25.0%
! CAATGAATAACAAATATGTG+TGG - chr1.1:50991224-50991243 None:intergenic 25.0%
! CATCATTATATACCATAGAA+AGG + chr1.1:50990320-50990339 MS.gene038038:intron 25.0%
! CTAATTCCTTTAACTAGTAT+GGG + chr1.1:50991921-50991940 MS.gene038038:intron 25.0%
! CTGTAAAAATAAAGGATAGT+TGG + chr1.1:50992312-50992331 MS.gene038038:intron 25.0%
! GTATCTAATCAGCATATTAT+TGG + chr1.1:50994357-50994376 MS.gene038038:CDS 25.0%
! TAAAGAATCTTTGTTCTTGT+TGG + chr1.1:50990239-50990258 MS.gene038038:intron 25.0%
! TAAGATGAAAGTGATACAAA+TGG - chr1.1:50990996-50991015 None:intergenic 25.0%
! TAATAGATCAATTCTGTAGA+GGG - chr1.1:50991413-50991432 None:intergenic 25.0%
! TCATTATATACCATAGAAAG+GGG + chr1.1:50990322-50990341 MS.gene038038:intron 25.0%
! TCTACAGAATTGATCTATTA+GGG + chr1.1:50991413-50991432 MS.gene038038:intron 25.0%
! TGATCATACAATTCGTATAT+GGG + chr1.1:50994876-50994895 MS.gene038038:CDS 25.0%
! TTCCTTGGAATAACATATAA+TGG + chr1.1:50992357-50992376 MS.gene038038:intron 25.0%
! TTTCGATATTACCTTGTAAA+TGG - chr1.1:50992440-50992459 None:intergenic 25.0%
!! AGAAATTCGGATTTTACATT+TGG + chr1.1:50994384-50994403 MS.gene038038:CDS 25.0%
!! ATTATGTCTGTATGTTTTGT+CGG + chr1.1:50990207-50990226 MS.gene038038:intron 25.0%
!! TTTGTTCAGTTTTCTAATAG+TGG + chr1.1:50991635-50991654 MS.gene038038:CDS 25.0%
!! TTTTCTTGTGTTTGCTTATT+GGG + chr1.1:50990169-50990188 MS.gene038038:intron 25.0%
!! TTTTTCTTGTGTTTGCTTAT+TGG + chr1.1:50990168-50990187 MS.gene038038:intron 25.0%
!!! CAACTATCCTTTATTTTTAC+AGG - chr1.1:50992314-50992333 None:intergenic 25.0%
!!! CACACATATTTGTTATTCAT+TGG + chr1.1:50991222-50991241 MS.gene038038:intron 25.0%
!!! TATGGAAGGTATTATGTTAT+TGG + chr1.1:50991699-50991718 MS.gene038038:intron 25.0%
AAACTGAGTTATGTTGGTAT+TGG + chr1.1:50990073-50990092 MS.gene038038:intron 30.0%
AAATGCAAACTGAGTTATGT+TGG + chr1.1:50990067-50990086 MS.gene038038:intron 30.0%
AACAGTAAGATCTACAACTT+TGG - chr1.1:50994323-50994342 None:intergenic 30.0%
AACAGTGCAAATATGTGATT+AGG + chr1.1:50994566-50994585 MS.gene038038:CDS 30.0%
AAGTAAGGAAAATGCTAACA+AGG - chr1.1:50992719-50992738 None:intergenic 30.0%
AATAATCCTTCTGATACACT+TGG + chr1.1:50989109-50989128 MS.gene038038:CDS 30.0%
AATATGGATGAGCATTACAT+TGG - chr1.1:50989964-50989983 None:intergenic 30.0%
AATATGTATGGGAACGTTAT+AGG + chr1.1:50992404-50992423 MS.gene038038:intron 30.0%
ACAGTAAGATCTACAACTTT+GGG - chr1.1:50994322-50994341 None:intergenic 30.0%
ACCCTAGAAAATAGAAACAA+TGG - chr1.1:50993251-50993270 None:intergenic 30.0%
AGTAAGGAAAATGCTAACAA+GGG - chr1.1:50992718-50992737 None:intergenic 30.0%
ATCCTAAGAGAAAACACAAA+AGG - chr1.1:50990891-50990910 None:intergenic 30.0%
ATGATTGTACAGCTATCATA+TGG + chr1.1:50991681-50991700 MS.gene038038:CDS 30.0%
ATTACAAAGGAGGTAACTTT+AGG + chr1.1:50990772-50990791 MS.gene038038:intron 30.0%
CAAATGTGGTAAATTGGTAA+TGG + chr1.1:50993941-50993960 MS.gene038038:intron 30.0%
CACAAGGCTGTATTTATAAT+AGG - chr1.1:50993467-50993486 None:intergenic 30.0%
CACTACATTATGTTGTAATG+AGG - chr1.1:50992786-50992805 None:intergenic 30.0%
CATGAAAATGGGTAGAAATT+AGG + chr1.1:50990930-50990949 MS.gene038038:intron 30.0%
CATGAGTATTTCAGAACATT+AGG - chr1.1:50993986-50994005 None:intergenic 30.0%
CCCTAGAAAATAGAAACAAT+GGG - chr1.1:50993250-50993269 None:intergenic 30.0%
CCTAGAAAATAGAAACAATG+GGG - chr1.1:50993249-50993268 None:intergenic 30.0%
CTAATAGATCAATTCTGTAG+AGG - chr1.1:50991414-50991433 None:intergenic 30.0%
CTAGAAAATAGAAACAATGG+GGG - chr1.1:50993248-50993267 None:intergenic 30.0%
CTCCAGTCTTTATATTCATT+AGG + chr1.1:50989175-50989194 MS.gene038038:CDS 30.0%
CTCTACAGAATTGATCTATT+AGG + chr1.1:50991412-50991431 MS.gene038038:intron 30.0%
CTGGACATAAAAATGAAGTT+TGG + chr1.1:50991612-50991631 MS.gene038038:CDS 30.0%
CTTTGTTAGAATCTGAATCT+GGG + chr1.1:50989215-50989234 MS.gene038038:CDS 30.0%
GACATAATATTAGAAAAGGC+AGG - chr1.1:50990195-50990214 None:intergenic 30.0%
GATCATACAATTCGTATATG+GGG + chr1.1:50994877-50994896 MS.gene038038:CDS 30.0%
GATTGTTTAACTGAGAATTG+TGG + chr1.1:50989780-50989799 MS.gene038038:intron 30.0%
GGTTAGGTGTTAATATGTAT+GGG + chr1.1:50992393-50992412 MS.gene038038:intron 30.0%
GTCCCGTTTAAGAAAAATTA+TGG + chr1.1:50990028-50990047 MS.gene038038:intron 30.0%
TATGATAGCTGTACAATCAT+TGG - chr1.1:50991681-50991700 None:intergenic 30.0%
TATTGCTTTGATTATGCTTG+TGG + chr1.1:50991115-50991134 MS.gene038038:intron 30.0%
TCAAACTATCAAACATCTTG+TGG - chr1.1:50993756-50993775 None:intergenic 30.0%
TCAATTCCAAATCTTGAGAT+TGG - chr1.1:50992908-50992927 None:intergenic 30.0%
TCACTTATATGATGCAGATA+AGG - chr1.1:50993375-50993394 None:intergenic 30.0%
TCATCAGAGTTACTAAAAGA+CGG - chr1.1:50990099-50990118 None:intergenic 30.0%
TCATGTTCTCAATGGAAATT+GGG + chr1.1:50989276-50989295 MS.gene038038:CDS 30.0%
TCTTTGTTAGAATCTGAATC+TGG + chr1.1:50989214-50989233 MS.gene038038:CDS 30.0%
TGGTCAATTTGAATGATGAT+GGG + chr1.1:50989497-50989516 MS.gene038038:CDS 30.0%
TGGTTAGGTGTTAATATGTA+TGG + chr1.1:50992392-50992411 MS.gene038038:intron 30.0%
TTACAAAGGAGGTAACTTTA+GGG + chr1.1:50990773-50990792 MS.gene038038:intron 30.0%
TTCAGATTCTAACAAAGAAG+CGG - chr1.1:50989212-50989231 None:intergenic 30.0%
TTCTTTGCATAAGTGATTGA+TGG + chr1.1:50989842-50989861 MS.gene038038:intron 30.0%
TTGTATCACTTTCATCTTAG+TGG + chr1.1:50990997-50991016 MS.gene038038:intron 30.0%
TTTATGACCTGAAGACAAAA+AGG + chr1.1:50992267-50992286 MS.gene038038:intron 30.0%
TTTGAATCTCATGTTCTCAA+TGG + chr1.1:50989268-50989287 MS.gene038038:CDS 30.0%
TTTGTGCGATAAAAGTTATC+TGG + chr1.1:50993616-50993635 MS.gene038038:intron 30.0%
TTTGTTAGAATCTGAATCTG+GGG + chr1.1:50989216-50989235 MS.gene038038:CDS 30.0%
! ACCTGCATGACATAAATTTT+GGG - chr1.1:50994739-50994758 None:intergenic 30.0%
! CTACGAAAATAGTTTGTATC+AGG + chr1.1:50993571-50993590 MS.gene038038:intron 30.0%
! TACCTGCATGACATAAATTT+TGG - chr1.1:50994740-50994759 None:intergenic 30.0%
! TATTTTCGTAGAATCAGACT+TGG - chr1.1:50993562-50993581 None:intergenic 30.0%
! TCAAGATTTGGAATTGATCA+AGG + chr1.1:50992911-50992930 MS.gene038038:intron 30.0%
! TGTTTCTTTGCAGATTTTGA+AGG + chr1.1:50990724-50990743 MS.gene038038:intron 30.0%
! TGTTTTGTACATCTTTTCCT+TGG + chr1.1:50991986-50992005 MS.gene038038:intron 30.0%
! TTCCTTTTGTGTTTTCTCTT+AGG + chr1.1:50990886-50990905 MS.gene038038:intron 30.0%
!! GTGTATCTTAAGAGTTTTGT+AGG + chr1.1:50992244-50992263 MS.gene038038:intron 30.0%
!! TATAATGGATGTCTCTTGTT+TGG + chr1.1:50992372-50992391 MS.gene038038:intron 30.0%
!!! CACTACAAGAAGGTTTTTTT+TGG - chr1.1:50993677-50993696 None:intergenic 30.0%
!!! CCCATTGTTTCTATTTTCTA+GGG + chr1.1:50993247-50993266 MS.gene038038:intron 30.0%
!!! TGTTTTTAGACAGTCTGTTA+TGG + chr1.1:50989369-50989388 MS.gene038038:CDS 30.0%
!!! TTGTTTTGGCTTCAAATTTG+TGG + chr1.1:50990461-50990480 MS.gene038038:intron 30.0%
!!! TTTTAAGTTTGTCATGAGAC+TGG + chr1.1:50993524-50993543 MS.gene038038:intron 30.0%
!!! TTTTTTTGGTACCATATCAC+CGG - chr1.1:50993663-50993682 None:intergenic 30.0%
AAACCGAAATGGATGTGATA+GGG - chr1.1:50994444-50994463 None:intergenic 35.0%
AAATGCGAGAAACATATGGA+TGG - chr1.1:50991325-50991344 None:intergenic 35.0%
AACAAATATGTGTGGAGCAA+AGG - chr1.1:50991216-50991235 None:intergenic 35.0%
AACTCAACACAATTTGTGTG+CGG + chr1.1:50994217-50994236 MS.gene038038:CDS 35.0%
AACTCACACAATTTACAGTC+AGG - chr1.1:50994816-50994835 None:intergenic 35.0%
AAGCATACATTTGGGAATGA+TGG + chr1.1:50994163-50994182 MS.gene038038:CDS 35.0%
AAGTTCTACATGACTAGTGA+TGG + chr1.1:50992030-50992049 MS.gene038038:intron 35.0%
AATGCAATTTCCCCTTTCTA+TGG - chr1.1:50990335-50990354 None:intergenic 35.0%
AATTCCATCACCGAAATTCT+CGG + chr1.1:50989319-50989338 MS.gene038038:CDS 35.0%
AATTGGACACTGTAAGAAGA+TGG - chr1.1:50990362-50990381 None:intergenic 35.0%
ACAACTATCACATTCACCTT+TGG + chr1.1:50993148-50993167 MS.gene038038:intron 35.0%
ACCACTAGATTGAGATAGTT+TGG - chr1.1:50993848-50993867 None:intergenic 35.0%
ACGTAAATGCGAGAAACATA+TGG - chr1.1:50991329-50991348 None:intergenic 35.0%
ACTCACACAATTTACAGTCA+GGG - chr1.1:50994815-50994834 None:intergenic 35.0%
AGAAACTTGGATTACAAAGG+AGG + chr1.1:50990762-50990781 MS.gene038038:intron 35.0%
AGTACAATTGACCAGTTGAA+AGG - chr1.1:50993000-50993019 None:intergenic 35.0%
AGTTCTACATGACTAGTGAT+GGG + chr1.1:50992031-50992050 MS.gene038038:intron 35.0%
ATCATGCCCATACTAGTTAA+AGG - chr1.1:50991930-50991949 None:intergenic 35.0%
ATGTTATTGCTATCATGGAG+AGG + chr1.1:50992491-50992510 MS.gene038038:intron 35.0%
ATTGATCTATTAGGGCCATA+TGG + chr1.1:50991421-50991440 MS.gene038038:intron 35.0%
CAACTCATAATTCCTTAGAG+GGG + chr1.1:50992539-50992558 MS.gene038038:intron 35.0%
CAAGCTCAAATGTGGTAAAT+TGG + chr1.1:50993935-50993954 MS.gene038038:intron 35.0%
CAATTTACCACATTTGAGCT+TGG - chr1.1:50993937-50993956 None:intergenic 35.0%
CACACAAATTGTGTTGAGTT+GGG - chr1.1:50994217-50994236 None:intergenic 35.0%
CACTCTTACTGTTGTGAATT+CGG - chr1.1:50991259-50991278 None:intergenic 35.0%
CATCAAGTTCTCTTTCTTGT+TGG + chr1.1:50993058-50993077 MS.gene038038:intron 35.0%
CCAACTCATAATTCCTTAGA+GGG + chr1.1:50992538-50992557 MS.gene038038:intron 35.0%
CTCATGTTCTCAATGGAAAT+TGG + chr1.1:50989275-50989294 MS.gene038038:CDS 35.0%
CTGATACACTTGGTTCAAAA+GGG + chr1.1:50989119-50989138 MS.gene038038:CDS 35.0%
CTTACATGATATTTGAGGAG+AGG - chr1.1:50992166-50992185 None:intergenic 35.0%
CTTTATGAGGATCATTCTTG+TGG + chr1.1:50989676-50989695 MS.gene038038:CDS 35.0%
GAGAGAAACTTGGATTACAA+AGG + chr1.1:50990759-50990778 MS.gene038038:intron 35.0%
GAGTGTGCCTGTAAAAATAA+AGG + chr1.1:50992304-50992323 MS.gene038038:intron 35.0%
GATAGTACATTTATTGCCAG+TGG + chr1.1:50994607-50994626 MS.gene038038:CDS 35.0%
GCTAACATATCACTACAAGA+AGG - chr1.1:50993687-50993706 None:intergenic 35.0%
GCTCATAATGTACAGGAATA+TGG - chr1.1:50991357-50991376 None:intergenic 35.0%
GGAAACATTGTAAACACCTT+GGG + chr1.1:50990830-50990849 MS.gene038038:intron 35.0%
GTAAGGAAAATGCTAACAAG+GGG - chr1.1:50992717-50992736 None:intergenic 35.0%
GTACAATTGACCAGTTGAAA+GGG - chr1.1:50992999-50993018 None:intergenic 35.0%
GTGGTCAATTTGAATGATGA+TGG + chr1.1:50989496-50989515 MS.gene038038:CDS 35.0%
GTTTATACAACTTGTCAGAC+AGG + chr1.1:50993866-50993885 MS.gene038038:intron 35.0%
TACAATATGCCGAACAAGAA+TGG + chr1.1:50991824-50991843 MS.gene038038:intron 35.0%
TACAGGTTGTAGTGAATAAC+TGG - chr1.1:50991878-50991897 None:intergenic 35.0%
TAGTCATGTAGAACTTGACA+AGG - chr1.1:50992026-50992045 None:intergenic 35.0%
TCATAGTTTGGCTAATAGTG+TGG + chr1.1:50989477-50989496 MS.gene038038:CDS 35.0%
TCTACATGCTCATAATGTAC+AGG - chr1.1:50991364-50991383 None:intergenic 35.0%
TCTGATACACTTGGTTCAAA+AGG + chr1.1:50989118-50989137 MS.gene038038:CDS 35.0%
TGAAACTACTGTAACTGCTT+GGG + chr1.1:50989612-50989631 MS.gene038038:CDS 35.0%
TGAAGCCAAAACAACACTTA+CGG - chr1.1:50990455-50990474 None:intergenic 35.0%
TGACTGTAAATTGTGTGAGT+TGG + chr1.1:50994815-50994834 MS.gene038038:CDS 35.0%
TGTCATGTCAATATGTGTGT+GGG + chr1.1:50992952-50992971 MS.gene038038:intron 35.0%
TGTCTAAATCAGATCACACA+AGG - chr1.1:50993483-50993502 None:intergenic 35.0%
TTAAACTTCTTCCGGTGATA+TGG + chr1.1:50993649-50993668 MS.gene038038:intron 35.0%
TTAGGATTCATTGTGAGTGT+GGG + chr1.1:50990904-50990923 MS.gene038038:intron 35.0%
TTATGTTGTAATGAGGACTC+TGG - chr1.1:50992779-50992798 None:intergenic 35.0%
TTCCTTTAACTAATTCCCCT+GGG - chr1.1:50992580-50992599 None:intergenic 35.0%
TTGAAACTACTGTAACTGCT+TGG + chr1.1:50989611-50989630 MS.gene038038:CDS 35.0%
TTGCCAATTCCATTCTTGTT+CGG - chr1.1:50991836-50991855 None:intergenic 35.0%
TTGTACAGCTATCATATGGA+AGG + chr1.1:50991685-50991704 MS.gene038038:CDS 35.0%
TTTACATTTGGCAACCAATG+CGG + chr1.1:50994396-50994415 MS.gene038038:CDS 35.0%
TTTCCTTTAACTAATTCCCC+TGG - chr1.1:50992581-50992600 None:intergenic 35.0%
TTTGAACCAAGTGTATCAGA+AGG - chr1.1:50989118-50989137 None:intergenic 35.0%
! AAAATACAGCGTGTGGATTA+CGG - chr1.1:50994696-50994715 None:intergenic 35.0%
! AGGTATACATCTGGAATTCT+CGG + chr1.1:50994755-50994774 MS.gene038038:intron 35.0%
! AGTCTTTCCTTTTTGTCTTC+AGG - chr1.1:50992277-50992296 None:intergenic 35.0%
! CCTCTAAGGAATTATGAGTT+GGG - chr1.1:50992540-50992559 None:intergenic 35.0%
! CCTGCATGACATAAATTTTG+GGG - chr1.1:50994738-50994757 None:intergenic 35.0%
! GATTTGGAATTGATCAAGGA+TGG + chr1.1:50992915-50992934 MS.gene038038:intron 35.0%
! GGTCAATTTGAATGATGATG+GGG + chr1.1:50989498-50989517 MS.gene038038:CDS 35.0%
! GTTTGATAGTTTGACTGTCA+AGG + chr1.1:50993762-50993781 MS.gene038038:intron 35.0%
! TATAATCGTGGCACGATTTT+GGG + chr1.1:50990565-50990584 MS.gene038038:intron 35.0%
! TATGTGATTAGGTCCTGTTT+TGG + chr1.1:50994577-50994596 MS.gene038038:CDS 35.0%
! TCACTTTCATCTTAGTGGAT+TGG + chr1.1:50991002-50991021 MS.gene038038:intron 35.0%
! TCGGTTTAAGGTTCATAGTT+TGG + chr1.1:50989465-50989484 MS.gene038038:CDS 35.0%
! TCTTTGTTCTTGTTGGTTAG+AGG + chr1.1:50990246-50990265 MS.gene038038:intron 35.0%
! TTTGTACATCTTTTCCTTGG+TGG + chr1.1:50991989-50992008 MS.gene038038:intron 35.0%
!! AAGCCAATAGAGGTTTTATC+TGG + chr1.1:50994784-50994803 MS.gene038038:CDS 35.0%
!! AATTTGAATGATGATGGGGA+TGG + chr1.1:50989502-50989521 MS.gene038038:CDS 35.0%
!! AGCCAATAGAGGTTTTATCT+GGG + chr1.1:50994785-50994804 MS.gene038038:CDS 35.0%
!! CTTAGTAAGCTTTAGCTTGA+GGG + chr1.1:50993299-50993318 MS.gene038038:intron 35.0%
!! TACTGATTCACCGAGAATTT+CGG - chr1.1:50989332-50989351 None:intergenic 35.0%
!! TGTTCTGAAATACTCATGAC+AGG + chr1.1:50993988-50994007 MS.gene038038:intron 35.0%
!! TTAGTAAGCTTTAGCTTGAG+GGG + chr1.1:50993300-50993319 MS.gene038038:intron 35.0%
!! TTTCATCTTAGTGGATTGGA+GGG + chr1.1:50991006-50991025 MS.gene038038:intron 35.0%
!!! CCCCATTGTTTCTATTTTCT+AGG + chr1.1:50993246-50993265 MS.gene038038:intron 35.0%
!!! CTGTTTTTGTTGTTGTTGCT+TGG + chr1.1:50991163-50991182 MS.gene038038:intron 35.0%
!!! TTGAACCGTAAGTGTTGTTT+TGG + chr1.1:50990447-50990466 MS.gene038038:intron 35.0%
AAAATCATGCCATGCACTAC+AGG - chr1.1:50991895-50991914 None:intergenic 40.0%
AAGGAACAAACACACCAAGA+TGG - chr1.1:50991077-50991096 None:intergenic 40.0%
ACACCAGCAAAACATGCTTT+CGG - chr1.1:50990546-50990565 None:intergenic 40.0%
ACATTGAAACACACACTCAG+CGG + chr1.1:50994031-50994050 MS.gene038038:CDS 40.0%
ACTATCTGATCCACCAAAAC+AGG - chr1.1:50994593-50994612 None:intergenic 40.0%
AGCTTGAAGAGAGAGAAACT+TGG + chr1.1:50990749-50990768 MS.gene038038:intron 40.0%
AGGAATTAATGACACCACCA+AGG - chr1.1:50992006-50992025 None:intergenic 40.0%
AGTGAGATTTCACCATTGGA+AGG + chr1.1:50990854-50990873 MS.gene038038:intron 40.0%
AGTGTGGGTGACATGAAAAT+GGG + chr1.1:50990919-50990938 MS.gene038038:intron 40.0%
ATGCCGAACAAGAATGGAAT+TGG + chr1.1:50991830-50991849 MS.gene038038:intron 40.0%
ATGGAAACGAACTAAGAGCA+TGG + chr1.1:50994281-50994300 MS.gene038038:CDS 40.0%
ATGTCATGCAGGTATACATC+TGG + chr1.1:50994746-50994765 MS.gene038038:intron 40.0%
CACGGCTTACATGATATTTG+AGG - chr1.1:50992171-50992190 None:intergenic 40.0%
CCAACAATCATCGCATATTG+AGG - chr1.1:50992877-50992896 None:intergenic 40.0%
CCAGCAACTAGGTTTAAGTA+AGG - chr1.1:50992734-50992753 None:intergenic 40.0%
CCCAACTCATAATTCCTTAG+AGG + chr1.1:50992537-50992556 MS.gene038038:intron 40.0%
CCCCAAAATTTATGTCATGC+AGG + chr1.1:50994735-50994754 MS.gene038038:intron 40.0%
CCTCAATATGCGATGATTGT+TGG + chr1.1:50992874-50992893 MS.gene038038:intron 40.0%
CCTTACTTAAACCTAGTTGC+TGG + chr1.1:50992731-50992750 MS.gene038038:intron 40.0%
CTGCTGAGCTATTAAAAGTC+GGG + chr1.1:50992097-50992116 MS.gene038038:intron 40.0%
CTGTCATGTCAATATGTGTG+TGG + chr1.1:50992951-50992970 MS.gene038038:intron 40.0%
CTTAGGATTCATTGTGAGTG+TGG + chr1.1:50990903-50990922 MS.gene038038:intron 40.0%
CTTGCAGATGCTAACATTTG+TGG - chr1.1:50994853-50994872 None:intergenic 40.0%
CTTTGTAGTGAGGATCTCTT+GGG + chr1.1:50990804-50990823 MS.gene038038:intron 40.0%
GAAACCGAAATGGATGTGAT+AGG - chr1.1:50994445-50994464 None:intergenic 40.0%
GAATCCTGTTTCGCTTTATG+AGG + chr1.1:50989663-50989682 MS.gene038038:CDS 40.0%
GATAGTTTGACTGTCAAGGA+AGG + chr1.1:50993766-50993785 MS.gene038038:intron 40.0%
GATCTTACTGTTACTCCAGA+CGG + chr1.1:50994331-50994350 MS.gene038038:CDS 40.0%
GATGTTAGGGTCCATTTACA+AGG + chr1.1:50992426-50992445 MS.gene038038:intron 40.0%
GCACACAAATTGTGTTGAGT+TGG - chr1.1:50994218-50994237 None:intergenic 40.0%
GCACATGCAAGCATACATTT+GGG + chr1.1:50994155-50994174 MS.gene038038:CDS 40.0%
GCCAAACTATCTCAATCTAG+TGG + chr1.1:50993844-50993863 MS.gene038038:intron 40.0%
GCTGCTGAGCTATTAAAAGT+CGG + chr1.1:50992096-50992115 MS.gene038038:intron 40.0%
GGGAAACATTGTAAACACCT+TGG + chr1.1:50990829-50990848 MS.gene038038:intron 40.0%
GGGAACGTTATAGGATGTTA+GGG + chr1.1:50992413-50992432 MS.gene038038:intron 40.0%
GTATCAAACGTGTCACGATT+TGG + chr1.1:50990658-50990677 MS.gene038038:intron 40.0%
TACTTAAACCTAGTTGCTGG+AGG + chr1.1:50992734-50992753 MS.gene038038:intron 40.0%
TATCTTGTCTGGAAGTTCCT+TGG + chr1.1:50992342-50992361 MS.gene038038:intron 40.0%
TCAAGGATGGAAATAGAAGC+AGG + chr1.1:50992928-50992947 MS.gene038038:intron 40.0%
TCCTTTAACTAATTCCCCTG+GGG - chr1.1:50992579-50992598 None:intergenic 40.0%
TCTTTGTAGTGAGGATCTCT+TGG + chr1.1:50990803-50990822 MS.gene038038:intron 40.0%
TGACGAAAAAATACAGCGTG+TGG - chr1.1:50994703-50994722 None:intergenic 40.0%
TGACTGTAGCAAAGATGGTT+GGG - chr1.1:50993188-50993207 None:intergenic 40.0%
TGATCCTCATAAAGCGAAAC+AGG - chr1.1:50989670-50989689 None:intergenic 40.0%
TGATGGGGATGGTGATTTAA+GGG + chr1.1:50989513-50989532 MS.gene038038:CDS 40.0%
TGCCCAGATAAAACCTCTAT+TGG - chr1.1:50994790-50994809 None:intergenic 40.0%
TGCTGAGCTATTAAAAGTCG+GGG + chr1.1:50992098-50992117 MS.gene038038:intron 40.0%
TGGGAACGTTATAGGATGTT+AGG + chr1.1:50992412-50992431 MS.gene038038:intron 40.0%
TGTCAGAGAATAGATCTCAC+CGG - chr1.1:50993131-50993150 None:intergenic 40.0%
TGTGAAGCTAATCCTCACAA+AGG - chr1.1:50990302-50990321 None:intergenic 40.0%
TTATGCTCCAAGCTCAAATG+TGG + chr1.1:50993927-50993946 MS.gene038038:intron 40.0%
TTGGAGCTCATTATCTTGTC+TGG + chr1.1:50992331-50992350 MS.gene038038:intron 40.0%
TTTAAGGGGGAAGTTGTTGA+TGG + chr1.1:50989528-50989547 MS.gene038038:CDS 40.0%
TTTCTATAGCCTCCTTTGTG+AGG + chr1.1:50990287-50990306 MS.gene038038:intron 40.0%
! ATGATGGGGATGGTGATTTA+AGG + chr1.1:50989512-50989531 MS.gene038038:CDS 40.0%
! CCCTCTAAGGAATTATGAGT+TGG - chr1.1:50992541-50992560 None:intergenic 40.0%
! GAAGCTTTTGATCCTTCCAA+TGG - chr1.1:50990869-50990888 None:intergenic 40.0%
! GCTAACATTTGTGGCCTTTT+AGG - chr1.1:50994844-50994863 None:intergenic 40.0%
! GGAAAACGTGACACGATTTT+CGG + chr1.1:50990586-50990605 MS.gene038038:intron 40.0%
! GTATAATCGTGGCACGATTT+TGG + chr1.1:50990564-50990583 MS.gene038038:intron 40.0%
! GTGTGAGTTGGAATCCTAAA+AGG + chr1.1:50994827-50994846 MS.gene038038:CDS 40.0%
! GTTATGGAGTATTTGAAGCG+TGG + chr1.1:50989385-50989404 MS.gene038038:CDS 40.0%
! GTTTTGCTGGTGTATAATCG+TGG + chr1.1:50990553-50990572 MS.gene038038:intron 40.0%
! TAGTGATGGGAAAGTCTTTC+AGG + chr1.1:50992044-50992063 MS.gene038038:intron 40.0%
! TCAACGTGCTGTATCTTTTG+TGG + chr1.1:50994057-50994076 MS.gene038038:CDS 40.0%
! TCATCAACGTGTCACGATTT+TGG + chr1.1:50990515-50990534 MS.gene038038:intron 40.0%
! TGGATGTCTCTTGTTTGGTT+AGG + chr1.1:50992377-50992396 MS.gene038038:intron 40.0%
!! AAGCTTTAAGCCTGTCACAA+TGG - chr1.1:50993282-50993301 None:intergenic 40.0%
!! ACATTTTAGGAGACTTGTCC+TGG + chr1.1:50992204-50992223 MS.gene038038:intron 40.0%
!! AGCTTTAAGCCTGTCACAAT+GGG - chr1.1:50993281-50993300 None:intergenic 40.0%
!! CATTTTAGGAGACTTGTCCT+GGG + chr1.1:50992205-50992224 MS.gene038038:intron 40.0%
!! CTTTCATCTTAGTGGATTGG+AGG + chr1.1:50991005-50991024 MS.gene038038:intron 40.0%
!! GCTTAGTAAGCTTTAGCTTG+AGG + chr1.1:50993298-50993317 MS.gene038038:intron 40.0%
!! GTTTAGCTTTGGATGTGTTG+AGG + chr1.1:50989416-50989435 MS.gene038038:CDS 40.0%
!!! ACATGGAAGTTTTGAAGCTG+TGG + chr1.1:50994119-50994138 MS.gene038038:CDS 40.0%
!!! CATGGAAGTTTTGAAGCTGT+GGG + chr1.1:50994120-50994139 MS.gene038038:CDS 40.0%
!!! GAATTGTGGCATGCTGTTTT+AGG + chr1.1:50989794-50989813 MS.gene038038:intron 40.0%
AAGAAGCCACTGAGGTATAC+TGG + chr1.1:50994538-50994557 MS.gene038038:CDS 45.0%
AAGCTGTGGGATGTTGAAAC+TGG + chr1.1:50994133-50994152 MS.gene038038:CDS 45.0%
ACACCAAGTTGCTCACTTGT+GGG + chr1.1:50994095-50994114 MS.gene038038:CDS 45.0%
ACCAAGATGGTAACCCAGTT+CGG - chr1.1:50991064-50991083 None:intergenic 45.0%
ACCAGTTGAAAGGGAATGAC+AGG - chr1.1:50992990-50993009 None:intergenic 45.0%
ACCATCAGCAGAAACCGAAA+TGG - chr1.1:50994455-50994474 None:intergenic 45.0%
AGAATAGATCTCACCGGAGA+AGG - chr1.1:50993125-50993144 None:intergenic 45.0%
AGGTCATATTGGACCGAACT+GGG + chr1.1:50991048-50991067 MS.gene038038:intron 45.0%
ATATGCGATGATTGTTGGCC+TGG + chr1.1:50992879-50992898 MS.gene038038:intron 45.0%
ATCTGCATGTGGGATTGTGA+TGG + chr1.1:50994262-50994281 MS.gene038038:CDS 45.0%
ATCTTTGCTACAGTCACCTC+CGG + chr1.1:50993192-50993211 MS.gene038038:intron 45.0%
ATGGAAAGTTGTAGCACAGC+CGG - chr1.1:50993214-50993233 None:intergenic 45.0%
ATGGGGATGGTGATTTAAGG+GGG + chr1.1:50989515-50989534 MS.gene038038:CDS 45.0%
CAGTGGCAGTGAAAATTCAG+AGG + chr1.1:50994624-50994643 MS.gene038038:CDS 45.0%
CATGACAGGTGCAAGAAGAT+GGG + chr1.1:50994002-50994021 MS.gene038038:intron 45.0%
CATTGAAACACACACTCAGC+GGG + chr1.1:50994032-50994051 MS.gene038038:CDS 45.0%
CATTGTCAATCTGAACAGCC+AGG + chr1.1:50994483-50994502 MS.gene038038:CDS 45.0%
CCAGTTGAAAGGGAATGACA+GGG - chr1.1:50992989-50993008 None:intergenic 45.0%
CTGATTAGATACTCTCCGTC+TGG - chr1.1:50994349-50994368 None:intergenic 45.0%
GAAGCTAATCCTCACAAAGG+AGG - chr1.1:50990299-50990318 None:intergenic 45.0%
GAGTGTGGGTGACATGAAAA+TGG + chr1.1:50990918-50990937 MS.gene038038:intron 45.0%
GATGGGGATGGTGATTTAAG+GGG + chr1.1:50989514-50989533 MS.gene038038:CDS 45.0%
GCACCCTATCACATCCATTT+CGG + chr1.1:50994438-50994457 MS.gene038038:CDS 45.0%
GGCACATGCAAGCATACATT+TGG + chr1.1:50994154-50994173 MS.gene038038:CDS 45.0%
GGGTAGTGAGATTTCACCAT+TGG + chr1.1:50990850-50990869 MS.gene038038:intron 45.0%
GGTCCAATATGACCTACTCT+GGG - chr1.1:50991043-50991062 None:intergenic 45.0%
GGTTGAGTGTCTTTGTAGTG+AGG + chr1.1:50990794-50990813 MS.gene038038:intron 45.0%
GTCCAATATGACCTACTCTG+GGG - chr1.1:50991042-50991061 None:intergenic 45.0%
GTGACTGTAGCAAAGATGGT+TGG - chr1.1:50993189-50993208 None:intergenic 45.0%
GTTTCCTACTACAACCACTC+AGG + chr1.1:50989708-50989727 MS.gene038038:CDS 45.0%
TACTACAACCACTCAGGTGT+GGG + chr1.1:50989714-50989733 MS.gene038038:intron 45.0%
TAGGTCATATTGGACCGAAC+TGG + chr1.1:50991047-50991066 MS.gene038038:intron 45.0%
TAGTGAGGATCTCTTGGGTT+GGG + chr1.1:50990809-50990828 MS.gene038038:intron 45.0%
TCACTACAACCTGTAGTGCA+TGG + chr1.1:50991883-50991902 MS.gene038038:intron 45.0%
TCATGACAGGTGCAAGAAGA+TGG + chr1.1:50994001-50994020 MS.gene038038:intron 45.0%
TCCAATATGACCTACTCTGG+GGG - chr1.1:50991041-50991060 None:intergenic 45.0%
TCCATTTCGGTTTCTGCTGA+TGG + chr1.1:50994451-50994470 MS.gene038038:CDS 45.0%
TCGGAGTTCAAAGCCAATAG+AGG + chr1.1:50994774-50994793 MS.gene038038:CDS 45.0%
TGAAATGACTCGTTCCGCAT+TGG - chr1.1:50994413-50994432 None:intergenic 45.0%
TGGCAGCCAATCTCAAGATT+TGG + chr1.1:50992899-50992918 MS.gene038038:intron 45.0%
TGGTGAAATCTCACTACCCA+AGG - chr1.1:50990849-50990868 None:intergenic 45.0%
TTCACCGAGAATTTCGGTGA+TGG - chr1.1:50989326-50989345 None:intergenic 45.0%
TTGTAATGAGGACTCTGGCA+AGG - chr1.1:50992774-50992793 None:intergenic 45.0%
TTGTGACCAGTATACCTCAG+TGG - chr1.1:50994547-50994566 None:intergenic 45.0%
TTTAAGCCTGTCACAATGGG+AGG - chr1.1:50993278-50993297 None:intergenic 45.0%
TTTCCTTAACTAGTGCCCCA+GGG + chr1.1:50992690-50992709 MS.gene038038:intron 45.0%
! AAATCTTGAGATTGGCTGCC+AGG - chr1.1:50992900-50992919 None:intergenic 45.0%
! AACGAACTAAGAGCATGGAG+AGG + chr1.1:50994286-50994305 MS.gene038038:CDS 45.0%
! ACATGCAGATGCCCTTTTCA+GGG - chr1.1:50994252-50994271 None:intergenic 45.0%
! CCATCCGGTATTGAAATCGA+CGG - chr1.1:50989574-50989593 None:intergenic 45.0%
! CTCTGAATTTTCACTGCCAC+TGG - chr1.1:50994626-50994645 None:intergenic 45.0%
! GATAAGGTTGGTCGTACCTT+GGG + chr1.1:50990629-50990648 MS.gene038038:intron 45.0%
! GTGCTGTATCTTTTGTGGCA+TGG + chr1.1:50994062-50994081 MS.gene038038:CDS 45.0%
! TAAGAGCATGGAGAGGAATG+AGG + chr1.1:50994293-50994312 MS.gene038038:CDS 45.0%
! TATTTGAAGCGTGGTGAGGA+TGG + chr1.1:50989394-50989413 MS.gene038038:CDS 45.0%
! TGGTGAGGATGGTTTAGCTT+TGG + chr1.1:50989405-50989424 MS.gene038038:CDS 45.0%
!! ATGCCGAAAGCATGTTTTGC+TGG + chr1.1:50990540-50990559 MS.gene038038:intron 45.0%
!! CATTCACCTTTGGAATCCTC+CGG + chr1.1:50993158-50993177 MS.gene038038:intron 45.0%
!! CGTCGATTTCAATACCGGAT+GGG + chr1.1:50989572-50989591 MS.gene038038:CDS 45.0%
!! GCACGTTTTCAGGATAAGGT+TGG + chr1.1:50990617-50990636 MS.gene038038:intron 45.0%
!! GGCAGTTTTGACCCTGAAAA+GGG + chr1.1:50994238-50994257 MS.gene038038:CDS 45.0%
!! GGGGAAGTTGTTGATGGATT+TGG + chr1.1:50989534-50989553 MS.gene038038:CDS 45.0%
!! GTGATTAGGTCCTGTTTTGG+TGG + chr1.1:50994580-50994599 MS.gene038038:CDS 45.0%
!! TCTGTATGTTTTGTCGGCTG+AGG + chr1.1:50990213-50990232 MS.gene038038:intron 45.0%
!! TGAAAAGGGCATCTGCATGT+GGG + chr1.1:50994252-50994271 MS.gene038038:CDS 45.0%
!! TTGTGTTGAGTTGGGAAACC+AGG - chr1.1:50994209-50994228 None:intergenic 45.0%
!! ATAAAATTATATAAATTGAT+TGG - chr1.1:50990143-50990162 None:intergenic 5.0%
AAATAGTCCCCACACCTGAG+TGG - chr1.1:50989725-50989744 None:intergenic 50.0%
AAATGCTAACAAGGGGACCC+TGG - chr1.1:50992710-50992729 None:intergenic 50.0%
AAATGCTCCAACCTCCCATC+CGG - chr1.1:50989589-50989608 None:intergenic 50.0%
AATGCTAACAAGGGGACCCT+GGG - chr1.1:50992709-50992728 None:intergenic 50.0%
ACAGCCAGGAGATCCATATG+TGG + chr1.1:50994497-50994516 MS.gene038038:CDS 50.0%
ACCGAACTGGGTTACCATCT+TGG + chr1.1:50991060-50991079 MS.gene038038:intron 50.0%
ACTACAACCACTCAGGTGTG+GGG + chr1.1:50989715-50989734 MS.gene038038:intron 50.0%
ACTGGTCAATTGTACTGCCC+TGG + chr1.1:50993004-50993023 MS.gene038038:intron 50.0%
AGTGAACTCACGTAGCAGGA+TGG - chr1.1:50993032-50993051 None:intergenic 50.0%
ATCCATATGTGGGACGTAGC+CGG + chr1.1:50994508-50994527 MS.gene038038:CDS 50.0%
CAACAAATATCGCCAGTCCC+AGG - chr1.1:50992225-50992244 None:intergenic 50.0%
CACACCTGAGTGGTTGTAGT+AGG - chr1.1:50989715-50989734 None:intergenic 50.0%
CAGCCAGGAGATCCATATGT+GGG + chr1.1:50994498-50994517 MS.gene038038:CDS 50.0%
CAGTGGCTTCTTCCATGTAC+CGG - chr1.1:50994530-50994549 None:intergenic 50.0%
CCAGTCAATATCTGCAGCGA+TGG - chr1.1:50991596-50991615 None:intergenic 50.0%
CCATCGCTGCAGATATTGAC+TGG + chr1.1:50991593-50991612 MS.gene038038:intron 50.0%
CCCTGTCATTCCCTTTCAAC+TGG + chr1.1:50992986-50993005 MS.gene038038:intron 50.0%
CGATTTCAATACCGGATGGG+AGG + chr1.1:50989575-50989594 MS.gene038038:CDS 50.0%
CGGTCCAATATGACCTACTC+TGG - chr1.1:50991044-50991063 None:intergenic 50.0%
CGTTTGATACGTACGACCCA+AGG - chr1.1:50990648-50990667 None:intergenic 50.0%
CTACTACAACCACTCAGGTG+TGG + chr1.1:50989713-50989732 MS.gene038038:intron 50.0%
GACACCAAGTTGCTCACTTG+TGG + chr1.1:50994094-50994113 MS.gene038038:CDS 50.0%
GCCCCAGGGGAATTAGTTAA+AGG + chr1.1:50992575-50992594 MS.gene038038:intron 50.0%
GGAGGTGACTGTAGCAAAGA+TGG - chr1.1:50993193-50993212 None:intergenic 50.0%
GTACATCCTCCCATTGTGAC+AGG + chr1.1:50993269-50993288 MS.gene038038:intron 50.0%
GTACATGGAAGAAGCCACTG+AGG + chr1.1:50994530-50994549 MS.gene038038:CDS 50.0%
GTAGTGAACCTCCAGCAACT+AGG - chr1.1:50992745-50992764 None:intergenic 50.0%
GTAGTGAGGATCTCTTGGGT+TGG + chr1.1:50990808-50990827 MS.gene038038:intron 50.0%
GTTCCCACAAGTGAGCAACT+TGG - chr1.1:50994101-50994120 None:intergenic 50.0%
GTTGCTCACTTGTGGGAACA+TGG + chr1.1:50994102-50994121 MS.gene038038:CDS 50.0%
GTTTCCTTAACTAGTGCCCC+AGG + chr1.1:50992689-50992708 MS.gene038038:intron 50.0%
TCCCCCAGAGTAGGTCATAT+TGG + chr1.1:50991037-50991056 MS.gene038038:intron 50.0%
TGCGGAACGAGTCATTTCAG+AGG + chr1.1:50994414-50994433 MS.gene038038:CDS 50.0%
TTAGTTAGCACGCCCCTCTA+AGG - chr1.1:50992554-50992573 None:intergenic 50.0%
TTCAATACCGGATGGGAGGT+TGG + chr1.1:50989579-50989598 MS.gene038038:CDS 50.0%
TTGTTGTCAGCTCATGTGCC+TGG + chr1.1:50994188-50994207 MS.gene038038:CDS 50.0%
TTTCTGCGTTGCGTGTGGAT+CGG + chr1.1:50989446-50989465 MS.gene038038:CDS 50.0%
! CACATGCAGATGCCCTTTTC+AGG - chr1.1:50994253-50994272 None:intergenic 50.0%
! GGAGTATTTGAAGCGTGGTG+AGG + chr1.1:50989390-50989409 MS.gene038038:CDS 50.0%
! GGATAAGGTTGGTCGTACCT+TGG + chr1.1:50990628-50990647 MS.gene038038:intron 50.0%
! GTTGCGTGTGGATCGGTTTA+AGG + chr1.1:50989453-50989472 MS.gene038038:CDS 50.0%
! TCCGGTATTGAAATCGACGG+AGG - chr1.1:50989571-50989590 None:intergenic 50.0%
!! CCGTCGATTTCAATACCGGA+TGG + chr1.1:50989571-50989590 MS.gene038038:CDS 50.0%
!! CGGCAGTTTTGACCCTGAAA+AGG + chr1.1:50994237-50994256 MS.gene038038:CDS 50.0%
!! CTGAAAAGGGCATCTGCATG+TGG + chr1.1:50994251-50994270 MS.gene038038:CDS 50.0%
!! CTGGGCACGTTTTCAGGATA+AGG + chr1.1:50990613-50990632 MS.gene038038:intron 50.0%
!! GACACGATTTTCGGCTTGCT+GGG + chr1.1:50990595-50990614 MS.gene038038:intron 50.0%
!! GCCTCCGTCGATTTCAATAC+CGG + chr1.1:50989567-50989586 MS.gene038038:CDS 50.0%
!! GTGAGCAACTTGGTGTCATC+AGG - chr1.1:50994091-50994110 None:intergenic 50.0%
!! TGACACGATTTTCGGCTTGC+TGG + chr1.1:50990594-50990613 MS.gene038038:intron 50.0%
ATGCTAACAAGGGGACCCTG+GGG - chr1.1:50992708-50992727 None:intergenic 55.0%
CACGTAGCAGGATGGAACCA+GGG - chr1.1:50993024-50993043 None:intergenic 55.0%
CGTCCCACATATGGATCTCC+TGG - chr1.1:50994504-50994523 None:intergenic 55.0%
CGTGCTAACTAATGCCCCAG+GGG + chr1.1:50992562-50992581 MS.gene038038:intron 55.0%
GAAAGTTGTAGCACAGCCGG+AGG - chr1.1:50993211-50993230 None:intergenic 55.0%
GCACAGTGAACTCACGTAGC+AGG - chr1.1:50993036-50993055 None:intergenic 55.0%
GCGTGCTAACTAATGCCCCA+GGG + chr1.1:50992561-50992580 MS.gene038038:intron 55.0%
TAGGAGACTTGTCCTGGGAC+TGG + chr1.1:50992210-50992229 MS.gene038038:intron 55.0%
TCACGTAGCAGGATGGAACC+AGG - chr1.1:50993025-50993044 None:intergenic 55.0%
! AATGGGGGTGTAGCTGCAGA+TGG - chr1.1:50993233-50993252 None:intergenic 55.0%
! GGATGGGAGGTTGGAGCATT+TGG + chr1.1:50989588-50989607 MS.gene038038:CDS 55.0%
! TACCGGCTACGTCCCACATA+TGG - chr1.1:50994513-50994532 None:intergenic 55.0%
ACGCGTTTCTGCGTTGCGTG+TGG + chr1.1:50989441-50989460 MS.gene038038:CDS 60.0%
GCAAAGATGGTTGGGCTCGC+CGG - chr1.1:50993180-50993199 None:intergenic 60.0%
GGCGTGCTAACTAATGCCCC+AGG + chr1.1:50992560-50992579 MS.gene038038:intron 60.0%
TGTGGGACGTAGCCGGTACA+TGG + chr1.1:50994515-50994534 MS.gene038038:CDS 60.0%
! GGACCCTGGGGCACTAGTTA+AGG - chr1.1:50992696-50992715 None:intergenic 60.0%
!!! GGCTTGCTGGGCACGTTTTC+AGG + chr1.1:50990607-50990626 MS.gene038038:intron 60.0%
AAGATGGTTGGGCTCGCCGG+AGG - chr1.1:50993177-50993196 None:intergenic 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG + chr1.1:50991028-50991047 MS.gene038038:intron 65.0%
GGCTCGCCGGAGGATTCCAA+AGG - chr1.1:50993167-50993186 None:intergenic 65.0%
TCGACCACACGCGCCTTCTC+CGG + chr1.1:50993109-50993128 MS.gene038038:intron 65.0%
! CTCACCGGAGAAGGCGCGTG+TGG - chr1.1:50993116-50993135 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 50989100 50994912 50989100 ID=MS.gene038038
chr1.1 mRNA 50989100 50994912 50989100 ID=MS.gene038038.t1;Parent=MS.gene038038
chr1.1 exon 50989100 50989729 50989100 ID=MS.gene038038.t1.exon1;Parent=MS.gene038038.t1
chr1.1 CDS 50989100 50989729 50989100 ID=cds.MS.gene038038.t1;Parent=MS.gene038038.t1
chr1.1 exon 50991605 50991706 50991605 ID=MS.gene038038.t1.exon2;Parent=MS.gene038038.t1
chr1.1 CDS 50991605 50991706 50991605 ID=cds.MS.gene038038.t1;Parent=MS.gene038038.t1
chr1.1 exon 50994010 50994645 50994010 ID=MS.gene038038.t1.exon3;Parent=MS.gene038038.t1
chr1.1 CDS 50994010 50994645 50994010 ID=cds.MS.gene038038.t1;Parent=MS.gene038038.t1
chr1.1 exon 50994757 50994912 50994757 ID=MS.gene038038.t1.exon4;Parent=MS.gene038038.t1
chr1.1 CDS 50994757 50994912 50994757 ID=cds.MS.gene038038.t1;Parent=MS.gene038038.t1
Gene Sequence

>MS.gene038038

ATGGAGAAGAATAATCCTTCTGATACACTTGGTTCAAAAGGGTTAATCAAAAAACATGAATTCATTCGTATCATACTCCAGTCTTTATATTCATTAGGTTACACAAAAACCGCTTCTTTGTTAGAATCTGAATCTGGGGTTTCTTACAAGTCCAGTGAATTTCAATTATTTGAATCTCATGTTCTCAATGGAAATTGGGATGCTTGTGTTACTTTTCTCAATTCCATCACCGAAATTCTCGGTGAATCAGTAGAATCTGCTTTGTTTCTTGTTTTTAGACAGTCTGTTATGGAGTATTTGAAGCGTGGTGAGGATGGTTTAGCTTTGGATGTGTTGAGGAAACGCGTTTCTGCGTTGCGTGTGGATCGGTTTAAGGTTCATAGTTTGGCTAATAGTGTGGTCAATTTGAATGATGATGGGGATGGTGATTTAAGGGGGAAGTTGTTGATGGATTTGGAGAAATTGTTGCCTCCGTCGATTTCAATACCGGATGGGAGGTTGGAGCATTTGGTTGAAACTACTGTAACTGCTTGGGTTGATTCGTGCTTGTATCATAGTTCGTCGAATCCTGTTTCGCTTTATGAGGATCATTCTTGTGGTAGAGATCAGTTTCCTACTACAACCACTCAGGTGTGGGGACTATTTTACTGTTTTCGAGATAAATTGTTTTGTGATTTTTAGATTGTTTAACTGAGAATTGTGGCATGCTGTTTTAGGTTGTACAAAAGTAATTTATTTGGTTTTCTTTGCATAAGTGATTGATGGATACTTTTATGTTTTGCTTTAAACATGTGATTGTGTTTGTAAAATAAGAGAAAGCTTTGAAGAGAAAAAAAAACTATGTTGAATTTCACGTTTAGACCAATGTAATGCTCATCCATATTTCATTTAACCAATGATTTCTGTATTCTATAATGCATATTTACTTGTCCCGTTTAAGAAAAATTATGGAATCACTGGTTTCTCTAAATGCAAACTGAGTTATGTTGGTATTGGCCGTCTTTTAGTAACTCTGATGAACATGACTTCATGTTTTCAGTCCAATCAATTTATATAATTTTATTTGTGTTTTTCTTGTGTTTGCTTATTGGGCCTGCCTTTTCTAATATTATGTCTGTATGTTTTGTCGGCTGAGGTTCTAAAGAATCTTTGTTCTTGTTGGTTAGAGGCTTAGAGCTTAGATTTTATTTCTATAGCCTCCTTTGTGAGGATTAGCTTCACATCATTATATACCATAGAAAGGGGAAATTGCATTGTTTCCATCTTCTTACAGTGTCCAATTGTGTATAAACTAGAAAATTGATTTCTGTGAAATAGAGATAATGTGTAGCTAGTTAAGCATTTATGTTGAACCGTAAGTGTTGTTTTGGCTTCAAATTTGTGGTTTTGAGAAACAGAGAAATCGTGACACGATTTCATCAACGTGTCACGATTTTGGCTATGCCGAAAGCATGTTTTGCTGGTGTATAATCGTGGCACGATTTTGGGAAAACGTGACACGATTTTCGGCTTGCTGGGCACGTTTTCAGGATAAGGTTGGTCGTACCTTGGGTCGTACGTATCAAACGTGTCACGATTTGGTCAAACGTGACACGATTTTGACAGCTGAAGACTGCTATATAAGTGTTTCTTTGCAGATTTTGAAGGAGAGCTTGAAGAGAGAGAAACTTGGATTACAAAGGAGGTAACTTTAGGGTTGAGTGTCTTTGTAGTGAGGATCTCTTGGGTTGGGAAACATTGTAAACACCTTGGGTAGTGAGATTTCACCATTGGAAGGATCAAAAGCTTCCTTTTGTGTTTTCTCTTAGGATTCATTGTGAGTGTGGGTGACATGAAAATGGGTAGAAATTAGGTCTTGTTCTTTTGTGAGCTTTTAAGCTAATTTCTTGTAACCCATTTGTATCACTTTCATCTTAGTGGATTGGAGGGCTGCTCTCTCCCCCAGAGTAGGTCATATTGGACCGAACTGGGTTACCATCTTGGTGTGTTTGTTCCTTTCTTTCATTGCTTATCTTTATTGCTTTGATTATGCTTGTGGTGTTGCTCTACACTTAGATTTAGATCTGTTTTTGTTGTTGTTGCTTGGAGACACTTTATCTATTGATTATCACTTCCTTTGCTCCACACATATTTGTTATTCATTGGTGTGATTTTGTCCGAATTCACAACAGTAAGAGTGATTTATTTTTCTTACGTAATAAGGAACAGTGCTCTAGTGTCTACCATCCATATGTTTCTCGCATTTACGTAGTTTCCATATTCCTGTACATTATGAGCATGTAGAAAGACTGTTTGCTTGTCTGTCTGTTTCCCTCTACAGAATTGATCTATTAGGGCCATATGGCAAGATATTAATTATTTTGGGCTGCTATGATATTGAAATAAAGCATGAATCAGATTTGCGATCATGAAGATAAATGTCCAAGTTAATCTTCTAGTTTTTAACATTTGATATTGCATGCTTTACTTATCAAATAATACTTTTCTCTTTTGCCATCGCTGCAGATATTGACTGGACATAAAAATGAAGTTTGGTTTGTTCAGTTTTCTAATAGTGGAGACTATCTAGCTTCTTCTTCCAATGATTGTACAGCTATCATATGGAAGGTATTATGTTATTGGCATTATATGACACATCTGTTTTTGCTTTAGATGATTCTTCCAATATAATTGTCTTTCTTTTTCTTGGCTTTGATTAAATTTCTGTGTTTTAGCTCACAATAATACAATATGCCGAACAAGAATGGAATTGGCAAATTCACATTCGTACAATATCCAGTTATTCACTACAACCTGTAGTGCATGGCATGATTTTCAAATACTAATTCCTTTAACTAGTATGGGCATGATAATATACACATTTATATATGGGTTAGTGAAAATTTGTGTTTTGTACATCTTTTCCTTGGTGGTGTCATTAATTCCTTGTCAAGTTCTACATGACTAGTGATGGGAAAGTCTTTCAGGCATCTATGATGTCAATATTCGACGAAAGTGCTGCTGAGCTATTAAAAGTCGGGGAAACTTCAAATGATTATTTTTTATAGCACTTTATCTTTTATACCTCTCCTCAAATATCATGTAAGCCGTGTAATAAAAAGTTCACATTTTAGGAGACTTGTCCTGGGACTGGCGATATTTGTTGTGTATCTTAAGAGTTTTGTAGGTTTATGACCTGAAGACAAAAAGGAAAGACTTGCTATAGAGTGTGCCTGTAAAAATAAAGGATAGTTGGAGCTCATTATCTTGTCTGGAAGTTCCTTGGAATAACATATAATGGATGTCTCTTGTTTGGTTAGGTGTTAATATGTATGGGAACGTTATAGGATGTTAGGGTCCATTTACAAGGTAATATCGAAAGATAAAAGAATAGGCTCTGCAGTTTCATTAGATGTTATTGCTATCATGGAGAGGTCACTGTTACATCATTGCAGACTCCCAACTCATAATTCCTTAGAGGGGCGTGCTAACTAATGCCCCAGGGGAATTAGTTAAAGGAAACAAAAGGAGTAAATTTTGTATTGAAATGCGCATTTTTACACTTTTAAGAGTTTGACTACAGAAGTTTCAAGATGTTTTTACTATATTTGTTTCCTTAACTAGTGCCCCAGGGTCCCCTTGTTAGCATTTTCCTTACTTAAACCTAGTTGCTGGAGGTTCACTACATGATTCCTTGCCAGAGTCCTCATTACAACATAATGTAGTGAATGAATAAATAATGATGGAAGAAGTTGATCATTAAAGACTAGCTCTAAAATAATAGTTCTATATTAGCCTCAATATGCGATGATTGTTGGCCTGGCAGCCAATCTCAAGATTTGGAATTGATCAAGGATGGAAATAGAAGCAGGCTGTCATGTCAATATGTGTGTGGGTTCAGACTTTGCCCTGTCATTCCCTTTCAACTGGTCAATTGTACTGCCCTGGTTCCATCCTGCTACGTGAGTTCACTGTGCTTCATCAAGTTCTCTTTCTTGTTGGCGCGTTTCTCTCAGCATTCAGCTGTAGTTCGACCACACGCGCCTTCTCCGGTGAGATCTATTCTCTGACAACTATCACATTCACCTTTGGAATCCTCCGGCGAGCCCAACCATCTTTGCTACAGTCACCTCCGGCTGTGCTACAACTTTCCATCTGCAGCTACACCCCCATTGTTTCTATTTTCTAGGGTACATCCTCCCATTGTGACAGGCTTAAAGCTTAGTAAGCTTTAGCTTGAGGGGAAGTGTAGACTTAGTCACATGTTGTTAGAACTGATCACATGCTATTATTCCTTATCTGCATCATATAAGTGATTAGGATTTAGCATTAGATTGAGCAATCATATCAATCAACATTTATTGTATATTTGTATTCATTCTGATCCTATTATAAATACAGCCTTGTGTGATCTGATTTAGACAAAAATCACCAATTCAACGAATTTTTAAGTTTGTCATGAGACTGGTCGCAGCAATTGCCAAGTCTGATTCTACGAAAATAGTTTGTATCAGGTAGTCTATATAACTAGACAACTTTTGTGCGATAAAAGTTATCTGGAATTTATATATTAAACTTCTTCCGGTGATATGGTACCAAAAAAAACCTTCTTGTAGTGATATGTTAGCAAAAAAATCTTGCTGTGATATATGTTTTGATATCTTTCGGAGAATACCACAAGATGTTTGATAGTTTGACTGTCAAGGAAGGTCAAATTCTTCTTATATCTCGCTAAATTGACGTCAATATATCAAATTTAAGTTCTGCCAAACTATCTCAATCTAGTGGTTTATACAACTTGTCAGACAGGTAATAAAAATATATAAAATTTAAATATGATTTTTAGTTTTATGCTCCAAGCTCAAATGTGGTAAATTGGTAATGGACTGTTTAGTAGTTTGATTCCTAATGTTCTGAAATACTCATGACAGGTGCAAGAAGATGGGAAATTGACATTGAAACACACACTCAGCGGGCATCAACGTGCTGTATCTTTTGTGGCATGGAGTCCTGATGACACCAAGTTGCTCACTTGTGGGAACATGGAAGTTTTGAAGCTGTGGGATGTTGAAACTGGCACATGCAAGCATACATTTGGGAATGATGGCTTTGTTGTCAGCTCATGTGCCTGGTTTCCCAACTCAACACAATTTGTGTGCGGCAGTTTTGACCCTGAAAAGGGCATCTGCATGTGGGATTGTGATGGAAACGAACTAAGAGCATGGAGAGGAATGAGGATGCCCAAAGTTGTAGATCTTACTGTTACTCCAGACGGAGAGTATCTAATCAGCATATTATTGGATAAAGAAATTCGGATTTTACATTTGGCAACCAATGCGGAACGAGTCATTTCAGAGGAGCACCCTATCACATCCATTTCGGTTTCTGCTGATGGTAAATTCTTCATTGTCAATCTGAACAGCCAGGAGATCCATATGTGGGACGTAGCCGGTACATGGAAGAAGCCACTGAGGTATACTGGTCACAAACAGTGCAAATATGTGATTAGGTCCTGTTTTGGTGGATCAGATAGTACATTTATTGCCAGTGGCAGTGAAAATTCAGAGGTAGTTTCCATTCTTAAGTGTATTAATTAATTAACAATCAATATACGCCGTAATCCACACGCTGTATTTTTTCGTCATTAATTGAAGCACCCCAAAATTTATGTCATGCAGGTATACATCTGGAATTCTCGGAGTTCAAAGCCAATAGAGGTTTTATCTGGGCACTCCCTGACTGTAAATTGTGTGAGTTGGAATCCTAAAAGGCCACAAATGTTAGCATCTGCAAGTGATGATCATACAATTCGTATATGGGGACCCAGCTTATAG
Protein sequence

>MS.gene038038.t1

MEKNNPSDTLGSKGLIKKHEFIRIILQSLYSLGYTKTASLLESESGVSYKSSEFQLFESHVLNGNWDACVTFLNSITEILGESVESALFLVFRQSVMEYLKRGEDGLALDVLRKRVSALRVDRFKVHSLANSVVNLNDDGDGDLRGKLLMDLEKLLPPSISIPDGRLEHLVETTVTAWVDSCLYHSSSNPVSLYEDHSCGRDQFPTTTTQILTGHKNEVWFVQFSNSGDYLASSSNDCTAIIWKVQEDGKLTLKHTLSGHQRAVSFVAWSPDDTKLLTCGNMEVLKLWDVETGTCKHTFGNDGFVVSSCAWFPNSTQFVCGSFDPEKGICMWDCDGNELRAWRGMRMPKVVDLTVTPDGEYLISILLDKEIRILHLATNAERVISEEHPITSISVSADGKFFIVNLNSQEIHMWDVAGTWKKPLRYTGHKQCKYVIRSCFGGSDSTFIASGSENSEVYIWNSRSSKPIEVLSGHSLTVNCVSWNPKRPQMLASASDDHTIRIWGPSL