Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94817.t1 | XP_013468406.1 | 96.6 | 506 | 17 | 0 | 3 | 508 | 2 | 507 | 1.10E-293 | 1018.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94817.t1 | Q9FND4 | 64.5 | 515 | 171 | 4 | 3 | 506 | 2 | 515 | 2.5e-201 | 703.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94817.t1 | A0A072VM11 | 96.6 | 506 | 17 | 0 | 3 | 508 | 2 | 507 | 8.0e-294 | 1018.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059032 | MS.gene94817 | 0.87693 | 9.44E-69 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene05876 | MS.gene94817 | PPI |
MS.gene47995 | MS.gene94817 | PPI |
MS.gene060690 | MS.gene94817 | PPI |
MS.gene24891 | MS.gene94817 | PPI |
MS.gene71874 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene049080 | PPI |
MS.gene22216 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene47674 | PPI |
MS.gene034002 | MS.gene94817 | PPI |
MS.gene58365 | MS.gene94817 | PPI |
MS.gene038240 | MS.gene94817 | PPI |
MS.gene015797 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene33343 | PPI |
MS.gene05950 | MS.gene94817 | PPI |
MS.gene79528 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene053443 | PPI |
MS.gene017032 | MS.gene94817 | PPI |
MS.gene015792 | MS.gene94817 | PPI |
MS.gene019162 | MS.gene94817 | PPI |
MS.gene33341 | MS.gene94817 | PPI |
MS.gene79525 | MS.gene94817 | PPI |
MS.gene53517 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene073888 | PPI |
MS.gene060688 | MS.gene94817 | PPI |
MS.gene033999 | MS.gene94817 | PPI |
MS.gene94817 | MS.gene059767 | PPI |
MS.gene46950 | MS.gene94817 | PPI |
MS.gene71248 | MS.gene94817 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94817.t1 | MTR_1g069345 | 96.640 | 506 | 17 | 0 | 3 | 508 | 2 | 507 | 0.0 | 1014 |
MS.gene94817.t1 | MTR_5g090420 | 48.297 | 499 | 253 | 3 | 9 | 505 | 54 | 549 | 2.30e-158 | 462 |
MS.gene94817.t1 | MTR_3g449990 | 46.746 | 507 | 260 | 3 | 7 | 505 | 52 | 556 | 2.19e-157 | 460 |
MS.gene94817.t1 | MTR_1g072140 | 30.592 | 304 | 199 | 8 | 206 | 504 | 16 | 312 | 2.18e-34 | 132 |
MS.gene94817.t1 | MTR_4g119620 | 31.731 | 312 | 194 | 11 | 206 | 504 | 16 | 321 | 2.13e-33 | 129 |
MS.gene94817.t1 | MTR_8g092620 | 26.073 | 303 | 214 | 8 | 203 | 504 | 4 | 297 | 6.59e-22 | 96.3 |
MS.gene94817.t1 | MTR_3g449950 | 32.850 | 207 | 132 | 1 | 8 | 207 | 46 | 252 | 1.31e-21 | 95.9 |
MS.gene94817.t1 | MTR_7g086360 | 26.059 | 307 | 198 | 10 | 212 | 503 | 50 | 342 | 2.51e-20 | 92.8 |
MS.gene94817.t1 | MTR_8g092620 | 25.249 | 301 | 215 | 7 | 203 | 502 | 11 | 302 | 6.44e-20 | 91.3 |
MS.gene94817.t1 | MTR_4g102520 | 25.325 | 308 | 215 | 10 | 206 | 504 | 283 | 584 | 3.28e-16 | 82.0 |
MS.gene94817.t1 | MTR_1g097140 | 24.776 | 335 | 204 | 12 | 211 | 504 | 74 | 401 | 6.52e-15 | 77.0 |
MS.gene94817.t1 | MTR_4g105700 | 24.375 | 320 | 196 | 8 | 225 | 504 | 162 | 475 | 1.52e-14 | 77.0 |
MS.gene94817.t1 | MTR_6g004040 | 29.870 | 154 | 103 | 2 | 211 | 364 | 95 | 243 | 2.00e-14 | 76.6 |
MS.gene94817.t1 | MTR_3g052220 | 21.361 | 529 | 357 | 19 | 16 | 506 | 6 | 513 | 3.33e-13 | 72.4 |
MS.gene94817.t1 | MTR_8g467040 | 23.975 | 317 | 220 | 10 | 203 | 504 | 105 | 415 | 1.87e-12 | 69.3 |
MS.gene94817.t1 | MTR_5g022690 | 22.744 | 277 | 193 | 6 | 244 | 504 | 162 | 433 | 5.32e-12 | 68.6 |
MS.gene94817.t1 | MTR_4g095058 | 32.192 | 146 | 84 | 5 | 210 | 345 | 404 | 544 | 9.18e-12 | 67.8 |
MS.gene94817.t1 | MTR_4g095058 | 32.192 | 146 | 84 | 5 | 210 | 345 | 406 | 546 | 9.37e-12 | 67.8 |
MS.gene94817.t1 | MTR_3g106080 | 34.711 | 121 | 72 | 4 | 215 | 334 | 459 | 573 | 1.55e-11 | 67.4 |
MS.gene94817.t1 | MTR_1g072740 | 25.391 | 256 | 178 | 8 | 205 | 452 | 281 | 531 | 4.62e-11 | 65.5 |
MS.gene94817.t1 | MTR_2g012630 | 28.205 | 156 | 105 | 4 | 211 | 365 | 94 | 243 | 7.59e-11 | 65.5 |
MS.gene94817.t1 | MTR_2g012630 | 28.205 | 156 | 105 | 4 | 211 | 365 | 94 | 243 | 8.45e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94817.t1 | AT5G43920 | 64.902 | 510 | 167 | 4 | 8 | 506 | 7 | 515 | 0.0 | 698 |
MS.gene94817.t1 | AT5G08560 | 46.457 | 508 | 260 | 3 | 8 | 505 | 55 | 560 | 3.95e-162 | 473 |
MS.gene94817.t1 | AT5G08560 | 46.457 | 508 | 260 | 3 | 8 | 505 | 55 | 560 | 3.95e-162 | 473 |
MS.gene94817.t1 | AT5G08560 | 46.457 | 508 | 260 | 3 | 8 | 505 | 55 | 560 | 3.95e-162 | 473 |
MS.gene94817.t1 | AT3G49660 | 32.248 | 307 | 193 | 11 | 206 | 504 | 13 | 312 | 2.53e-32 | 126 |
MS.gene94817.t1 | AT4G02730 | 30.619 | 307 | 196 | 11 | 206 | 504 | 32 | 329 | 2.30e-26 | 110 |
MS.gene94817.t1 | AT5G64730 | 27.152 | 302 | 210 | 7 | 204 | 504 | 5 | 297 | 4.34e-24 | 102 |
MS.gene94817.t1 | AT2G43770 | 24.194 | 310 | 200 | 11 | 212 | 503 | 48 | 340 | 4.29e-20 | 92.0 |
MS.gene94817.t1 | AT1G10580 | 26.059 | 307 | 214 | 8 | 206 | 504 | 271 | 572 | 2.96e-18 | 88.2 |
MS.gene94817.t1 | AT1G73720 | 21.606 | 523 | 362 | 17 | 16 | 506 | 5 | 511 | 6.38e-15 | 77.8 |
MS.gene94817.t1 | AT5G08390 | 30.519 | 154 | 102 | 2 | 211 | 364 | 95 | 243 | 1.52e-14 | 77.0 |
MS.gene94817.t1 | AT3G27640 | 23.611 | 288 | 173 | 10 | 260 | 504 | 126 | 409 | 1.13e-13 | 73.9 |
MS.gene94817.t1 | AT3G27640 | 23.529 | 289 | 174 | 10 | 260 | 505 | 107 | 391 | 1.15e-13 | 73.9 |
MS.gene94817.t1 | AT5G56130 | 23.179 | 302 | 210 | 8 | 205 | 498 | 8 | 295 | 1.38e-13 | 72.0 |
MS.gene94817.t1 | AT2G41500 | 24.621 | 264 | 189 | 6 | 244 | 504 | 237 | 493 | 4.59e-13 | 72.0 |
MS.gene94817.t1 | AT2G41500 | 24.621 | 264 | 189 | 6 | 244 | 504 | 237 | 493 | 4.59e-13 | 72.0 |
MS.gene94817.t1 | AT5G54520 | 25.723 | 311 | 204 | 11 | 204 | 496 | 147 | 448 | 1.04e-12 | 70.5 |
MS.gene94817.t1 | AT5G25150 | 35.833 | 120 | 72 | 2 | 215 | 334 | 458 | 572 | 1.98e-12 | 70.1 |
MS.gene94817.t1 | AT5G25150 | 25.701 | 214 | 150 | 5 | 212 | 422 | 413 | 620 | 3.28e-11 | 66.2 |
MS.gene94817.t1 | AT5G25150 | 35.833 | 120 | 72 | 2 | 215 | 334 | 458 | 572 | 2.02e-12 | 70.1 |
MS.gene94817.t1 | AT5G25150 | 25.701 | 214 | 150 | 5 | 212 | 422 | 413 | 620 | 3.21e-11 | 66.2 |
MS.gene94817.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 211 | 364 | 95 | 243 | 3.13e-12 | 69.7 |
MS.gene94817.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 211 | 364 | 95 | 243 | 3.15e-12 | 69.7 |
MS.gene94817.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 211 | 364 | 95 | 243 | 3.15e-12 | 69.7 |
MS.gene94817.t1 | AT5G67320 | 24.519 | 208 | 110 | 4 | 213 | 374 | 361 | 567 | 5.24e-12 | 68.9 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 537 | 805 | 1.89e-11 | 67.4 |
MS.gene94817.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 1.92e-11 | 67.4 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 518 | 786 | 1.97e-11 | 67.0 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 518 | 786 | 1.97e-11 | 67.0 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 518 | 786 | 1.97e-11 | 67.0 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 518 | 786 | 1.97e-11 | 67.0 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 518 | 786 | 1.97e-11 | 67.0 |
MS.gene94817.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 1.99e-11 | 67.4 |
MS.gene94817.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 211 | 369 | 52 | 205 | 2.05e-11 | 67.4 |
MS.gene94817.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 225 | 504 | 516 | 784 | 2.06e-11 | 67.0 |
MS.gene94817.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 2.11e-11 | 67.0 |
MS.gene94817.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 2.43e-11 | 67.0 |
MS.gene94817.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 3.29e-11 | 66.6 |
MS.gene94817.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 211 | 369 | 94 | 247 | 3.46e-11 | 66.6 |
Find 122 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTTGGGGATGGTGATTTA+AGG | 0.141565 | 1.4:+55867010 | MS.gene94817:CDS |
GTTGCGTGTGGATCGGTTTA+AGG | 0.154853 | 1.4:+55866948 | MS.gene94817:CDS |
CTCATGTTCTCAATGGAAAT+TGG | 0.169730 | 1.4:+55866770 | MS.gene94817:CDS |
TCTTTGTTAGAATCTGAATC+TGG | 0.256899 | 1.4:+55866709 | MS.gene94817:CDS |
GGGGAAGTTGTTGATGGATT+TGG | 0.271980 | 1.4:+55867032 | MS.gene94817:CDS |
GTATCTAATCAGCATATTAT+TGG | 0.286140 | 1.4:+55871038 | MS.gene94817:CDS |
GGATGGGAGGTTGGAGCATT+TGG | 0.313462 | 1.4:+55867086 | MS.gene94817:CDS |
ATGATCATACAATTCGTATA+TGG | 0.316168 | 1.4:+55871556 | MS.gene94817:CDS |
AACAGTAAGATCTACAACTT+TGG | 0.350301 | 1.4:-55871001 | None:intergenic |
TCGGTTTAAGGTTCATAGTT+TGG | 0.352737 | 1.4:+55866960 | MS.gene94817:CDS |
GTGTGAGTTGGAATCCTAAA+AGG | 0.354015 | 1.4:+55871508 | MS.gene94817:CDS |
GCACCCTATCACATCCATTT+CGG | 0.373837 | 1.4:+55871119 | MS.gene94817:CDS |
GGCACATGCAAGCATACATT+TGG | 0.379697 | 1.4:+55870835 | MS.gene94817:CDS |
CTCCAGTCTTTATATTCATT+AGG | 0.380177 | 1.4:+55866670 | MS.gene94817:CDS |
TATGATAGCTGTACAATCAT+TGG | 0.395715 | 1.4:-55868358 | None:intergenic |
TTCAAATAATTGAAATTCAC+TGG | 0.396303 | 1.4:-55866746 | None:intergenic |
TCTGATACACTTGGTTCAAA+AGG | 0.396779 | 1.4:+55866613 | MS.gene94817:CDS |
TTGTTGTCAGCTCATGTGCC+TGG | 0.397599 | 1.4:+55870869 | MS.gene94817:CDS |
TTTGAATCTCATGTTCTCAA+TGG | 0.398311 | 1.4:+55866763 | MS.gene94817:CDS |
TGATCCTCATAAAGCGAAAC+AGG | 0.402100 | 1.4:-55867165 | None:intergenic |
GAAACCGAAATGGATGTGAT+AGG | 0.405173 | 1.4:-55871123 | None:intergenic |
CTTTGTTAGAATCTGAATCT+GGG | 0.411797 | 1.4:+55866710 | MS.gene94817:CDS |
TATTATTGGATAAAGAAATT+CGG | 0.420368 | 1.4:+55871052 | MS.gene94817:CDS |
TCATGTTCTCAATGGAAATT+GGG | 0.422581 | 1.4:+55866771 | MS.gene94817:CDS |
CTTGCAGATGCTAACATTTG+TGG | 0.423994 | 1.4:-55871531 | None:intergenic |
TCCATTTCGGTTTCTGCTGA+TGG | 0.424486 | 1.4:+55871132 | MS.gene94817:CDS |
GAATCCTGTTTCGCTTTATG+AGG | 0.429795 | 1.4:+55867161 | MS.gene94817:CDS |
TCAATTTGAATGATGATGTT+GGG | 0.432441 | 1.4:+55866995 | MS.gene94817:CDS |
ACTATCTGATCCACCAAAAC+AGG | 0.432506 | 1.4:-55871271 | None:intergenic |
AATTCCATCACTGAAATTCT+CGG | 0.433423 | 1.4:+55866814 | MS.gene94817:CDS |
TGCCCAGATAAAACCTCTAT+TGG | 0.433743 | 1.4:-55871468 | None:intergenic |
TACCGGCTACGTCCCACATA+TGG | 0.434480 | 1.4:-55871191 | None:intergenic |
AACAGTGCAAATATGTGATT+AGG | 0.435394 | 1.4:+55871247 | MS.gene94817:CDS |
TGATCATACAATTCGTATAT+GGG | 0.440898 | 1.4:+55871557 | MS.gene94817:CDS |
GTGAGCAACTTGGTGTCATC+AGG | 0.450464 | 1.4:-55870769 | None:intergenic |
CACACAAATTGTGTTGAGTT+GGG | 0.450918 | 1.4:-55870895 | None:intergenic |
ATGATTGTACAGCTATCATA+TGG | 0.454185 | 1.4:+55868361 | MS.gene94817:CDS |
AAGCATACATTTGGGAATGA+TGG | 0.454570 | 1.4:+55870844 | MS.gene94817:CDS |
TGGTGAGGATGGTTTAGCTT+TGG | 0.455755 | 1.4:+55866900 | MS.gene94817:CDS |
CTGATACACTTGGTTCAAAA+GGG | 0.459776 | 1.4:+55866614 | MS.gene94817:CDS |
GCCTCCGTCGATTTCAATAC+CGG | 0.460349 | 1.4:+55867065 | MS.gene94817:CDS |
TCGGAGTTCAAAGCCAATAG+AGG | 0.460726 | 1.4:+55871455 | MS.gene94817:CDS |
AGGTATACATCTGGAATTCT+CGG | 0.461243 | 1.4:+55871436 | MS.gene94817:intron |
AAGAAGCCACTGAGGTATAC+TGG | 0.462412 | 1.4:+55871219 | MS.gene94817:CDS |
ATGTCATGCAGGTATACATC+TGG | 0.463142 | 1.4:+55871427 | MS.gene94817:intron |
AACTCACACAATTTACAGTC+AGG | 0.464438 | 1.4:-55871494 | None:intergenic |
AAGCTGTGGGATGTTGAAAC+TGG | 0.467380 | 1.4:+55870814 | MS.gene94817:CDS |
ACAGTAAGATCTACAACTTT+GGG | 0.468874 | 1.4:-55871000 | None:intergenic |
TATTTGAAGCGTGGTGAGGA+TGG | 0.471192 | 1.4:+55866889 | MS.gene94817:CDS |
TGAAACTACTGTAACTGCTT+GGG | 0.471578 | 1.4:+55867110 | MS.gene94817:CDS |
TCATGACAGGTGCAAGAAGA+TGG | 0.473179 | 1.4:+55870682 | MS.gene94817:intron |
CTGATTAGATACTCTCCGTC+TGG | 0.473361 | 1.4:-55871027 | None:intergenic |
GTCAATTTGAATGATGATGT+TGG | 0.477674 | 1.4:+55866994 | MS.gene94817:CDS |
ACCATCAGCAGAAACCGAAA+TGG | 0.490342 | 1.4:-55871133 | None:intergenic |
TTGTGTTGAGTTGGGAAACC+AGG | 0.493030 | 1.4:-55870887 | None:intergenic |
CCATCGCTGCAGATATTGAC+TGG | 0.494376 | 1.4:+55868273 | MS.gene94817:intron |
TATGTGATTAGGTCCTGTTT+TGG | 0.495271 | 1.4:+55871258 | MS.gene94817:CDS |
CGTCCCACATATGGATCTCC+TGG | 0.498007 | 1.4:-55871182 | None:intergenic |
TGAAATGACTCGTTCCGCAT+TGG | 0.499253 | 1.4:-55871091 | None:intergenic |
TTGAAACTACTGTAACTGCT+TGG | 0.503071 | 1.4:+55867109 | MS.gene94817:CDS |
GCACATGCAAGCATACATTT+GGG | 0.503407 | 1.4:+55870836 | MS.gene94817:CDS |
TTCAATACCGGATGGGAGGT+TGG | 0.504415 | 1.4:+55867077 | MS.gene94817:CDS |
ACACCAAGTTGCTCACTTGT+GGG | 0.504463 | 1.4:+55870776 | MS.gene94817:CDS |
TGTGGGACGTAGCCGGTACA+TGG | 0.507750 | 1.4:+55871196 | MS.gene94817:CDS |
TTTCTGCGTTGCGTGTGGAT+CGG | 0.517617 | 1.4:+55866941 | MS.gene94817:CDS |
AACCTAATGAATATAAAGAC+TGG | 0.521122 | 1.4:-55866672 | None:intergenic |
AAATGCTCCAACCTCCCATC+CGG | 0.525059 | 1.4:-55867084 | None:intergenic |
TGTTGGGGATGGTGATTTAA+GGG | 0.533629 | 1.4:+55867011 | MS.gene94817:CDS |
GTTGCTCACTTGTGGGAACA+TGG | 0.542757 | 1.4:+55870783 | MS.gene94817:CDS |
ATCCATATGTGGGACGTAGC+CGG | 0.545469 | 1.4:+55871189 | MS.gene94817:CDS |
CACACCTGAGTGGTTGTAGT+AGG | 0.545496 | 1.4:-55867210 | None:intergenic |
TAAGAGCATGGAGAGGAATG+AGG | 0.547696 | 1.4:+55870974 | MS.gene94817:CDS |
TTTGTTAGAATCTGAATCTG+GGG | 0.549343 | 1.4:+55866711 | MS.gene94817:CDS |
GATAGTACATTTATTGCCAG+TGG | 0.550032 | 1.4:+55871288 | MS.gene94817:CDS |
TTCAGATTCTAACAAAGAAG+CGG | 0.551222 | 1.4:-55866704 | None:intergenic |
ACGCGTTTCTGCGTTGCGTG+TGG | 0.551618 | 1.4:+55866936 | MS.gene94817:CDS |
CATGACAGGTGCAAGAAGAT+GGG | 0.551858 | 1.4:+55870683 | MS.gene94817:intron |
CAGTGGCTTCTTCCATGTAC+CGG | 0.552345 | 1.4:-55871208 | None:intergenic |
CATTGAAACACACACTCAGC+GGG | 0.556918 | 1.4:+55870713 | MS.gene94817:CDS |
GACACCAAGTTGCTCACTTG+TGG | 0.557860 | 1.4:+55870775 | MS.gene94817:CDS |
TGACTGTAAATTGTGTGAGT+TGG | 0.561065 | 1.4:+55871496 | MS.gene94817:CDS |
GCACACAAATTGTGTTGAGT+TGG | 0.567860 | 1.4:-55870896 | None:intergenic |
AAACCGAAATGGATGTGATA+GGG | 0.569486 | 1.4:-55871122 | None:intergenic |
TTTGAACCAAGTGTATCAGA+AGG | 0.571167 | 1.4:-55866610 | None:intergenic |
CTGAAAAGGGCATCTGCATG+TGG | 0.572336 | 1.4:+55870932 | MS.gene94817:CDS |
CTTTATGAGGATCATTCTTG+TGG | 0.579816 | 1.4:+55867174 | MS.gene94817:CDS |
CATTGTCAATCTGAACAGCC+AGG | 0.580347 | 1.4:+55871164 | MS.gene94817:CDS |
CCGTCGATTTCAATACCGGA+TGG | 0.584628 | 1.4:+55867069 | MS.gene94817:CDS |
TTGGGGATGGTGATTTAAGG+GGG | 0.584997 | 1.4:+55867013 | MS.gene94817:CDS |
GTTCCCACAAGTGAGCAACT+TGG | 0.587680 | 1.4:-55870779 | None:intergenic |
GTTTAGCTTTGGATGTGTTG+AGG | 0.589963 | 1.4:+55866911 | MS.gene94817:CDS |
GATCTTACTGTTACTCCAGA+CGG | 0.591056 | 1.4:+55871012 | MS.gene94817:CDS |
CAATTTGAATGATGATGTTG+GGG | 0.597151 | 1.4:+55866996 | MS.gene94817:CDS |
TCATAGTTTGGCTAATAGTG+TGG | 0.606420 | 1.4:+55866972 | MS.gene94817:CDS |
AATAATCCTTCTGATACACT+TGG | 0.609357 | 1.4:+55866604 | MS.gene94817:CDS |
ATGGAAACGAACTAAGAGCA+TGG | 0.613680 | 1.4:+55870962 | MS.gene94817:CDS |
ATCACCGAGAATTTCAGTGA+TGG | 0.613702 | 1.4:-55866818 | None:intergenic |
CGATTTCAATACCGGATGGG+AGG | 0.614148 | 1.4:+55867073 | MS.gene94817:CDS |
TTGTACAGCTATCATATGGA+AGG | 0.615144 | 1.4:+55868365 | MS.gene94817:CDS |
GTTGGGGATGGTGATTTAAG+GGG | 0.617802 | 1.4:+55867012 | MS.gene94817:CDS |
TTGAATGATGATGTTGGGGA+TGG | 0.620905 | 1.4:+55867000 | MS.gene94817:CDS |
CGTCGATTTCAATACCGGAT+GGG | 0.620992 | 1.4:+55867070 | MS.gene94817:CDS |
GATCATACAATTCGTATATG+GGG | 0.635457 | 1.4:+55871558 | MS.gene94817:CDS |
ACTCACACAATTTACAGTCA+GGG | 0.642161 | 1.4:-55871493 | None:intergenic |
TGAAAAGGGCATCTGCATGT+GGG | 0.642317 | 1.4:+55870933 | MS.gene94817:CDS |
ATCTGCATGTGGGATTGTGA+TGG | 0.648066 | 1.4:+55870943 | MS.gene94817:CDS |
GGAGTATTTGAAGCGTGGTG+AGG | 0.650464 | 1.4:+55866885 | MS.gene94817:CDS |
CAGTGGCAGTGAAAATTCAG+AGG | 0.651247 | 1.4:+55871305 | MS.gene94817:CDS |
ACAGCCAGGAGATCCATATG+TGG | 0.653394 | 1.4:+55871178 | MS.gene94817:CDS |
AACTCAACACAATTTGTGTG+CGG | 0.654042 | 1.4:+55870898 | MS.gene94817:CDS |
CAGCCAGGAGATCCATATGT+GGG | 0.654626 | 1.4:+55871179 | MS.gene94817:CDS |
TTTACATTTGGCAACCAATG+CGG | 0.654902 | 1.4:+55871077 | MS.gene94817:CDS |
TTGTGACCAGTATACCTCAG+TGG | 0.655395 | 1.4:-55871225 | None:intergenic |
GTTTCCTACTACAACCACTC+AGG | 0.661809 | 1.4:+55867206 | MS.gene94817:CDS |
GTTATGGAGTATTTGAAGCG+TGG | 0.666506 | 1.4:+55866880 | MS.gene94817:CDS |
AACGAACTAAGAGCATGGAG+AGG | 0.668734 | 1.4:+55870967 | MS.gene94817:CDS |
TGCGGAACGAGTCATTTCAG+AGG | 0.674288 | 1.4:+55871095 | MS.gene94817:CDS |
CCATCCGGTATTGAAATCGA+CGG | 0.682456 | 1.4:-55867069 | None:intergenic |
ACATTGAAACACACACTCAG+CGG | 0.684546 | 1.4:+55870712 | MS.gene94817:CDS |
AAATAGTCCCCACACCTGAG+TGG | 0.685449 | 1.4:-55867220 | None:intergenic |
TCCGGTATTGAAATCGACGG+AGG | 0.704177 | 1.4:-55867066 | None:intergenic |
GTACATGGAAGAAGCCACTG+AGG | 0.776918 | 1.4:+55871211 | MS.gene94817:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATACACATTTATATA+TGG | + | chr1.4:55868628-55868647 | MS.gene94817:intron | 10.0% |
!! | TAATATACACATTTATATAT+GGG | + | chr1.4:55868629-55868648 | MS.gene94817:intron | 10.0% |
!! | AAAAAGAAAGACAATTATAT+TGG | - | chr1.4:55868444-55868463 | None:intergenic | 15.0% |
!! | TATTATTGGATAAAGAAATT+CGG | + | chr1.4:55871052-55871071 | MS.gene94817:CDS | 15.0% |
!! | TTAATTAATACACTTAAGAA+TGG | - | chr1.4:55871337-55871356 | None:intergenic | 15.0% |
!! | TTGTACAAAAGTAATTTATT+TGG | + | chr1.4:55867315-55867334 | MS.gene94817:intron | 15.0% |
!! | TTTATATATTAAACTTCTTC+CGG | + | chr1.4:55870322-55870341 | MS.gene94817:intron | 15.0% |
!!! | ATATATGTTTTGATATCTTT+CGG | + | chr1.4:55870405-55870424 | MS.gene94817:intron | 15.0% |
!!! | ATTCCATAATTTTTCTTAAA+CGG | - | chr1.4:55867531-55867550 | None:intergenic | 15.0% |
!!! | TAATAAAAAGTTCACATTTT+AGG | + | chr1.4:55868871-55868890 | MS.gene94817:intron | 15.0% |
!!! | TTTATTTTTCTTACGTAATA+AGG | + | chr1.4:55867960-55867979 | MS.gene94817:intron | 15.0% |
!! | AACTTAAAAATTCGTTGAAT+TGG | - | chr1.4:55870194-55870213 | None:intergenic | 20.0% |
!! | AGAAAAATAAATCACTCTTA+CGG | - | chr1.4:55867951-55867970 | None:intergenic | 20.0% |
!! | AGTGAATGAATAAATAATGA+TGG | + | chr1.4:55869481-55869500 | MS.gene94817:intron | 20.0% |
!! | ATAATTAATATCTTGCCATA+TGG | - | chr1.4:55868119-55868138 | None:intergenic | 20.0% |
!! | ATATCGAAAGATAAAAGAAT+AGG | + | chr1.4:55869131-55869150 | MS.gene94817:intron | 20.0% |
!! | ATCATTATATACCATAGAAA+GGG | + | chr1.4:55867817-55867836 | MS.gene94817:intron | 20.0% |
!! | TAAAAACTAGAAGATTAACT+TGG | - | chr1.4:55868204-55868223 | None:intergenic | 20.0% |
!! | TACAGACATAATATTAGAAA+AGG | - | chr1.4:55867695-55867714 | None:intergenic | 20.0% |
!! | TTATAGAATACAGAAATCAT+TGG | - | chr1.4:55867492-55867511 | None:intergenic | 20.0% |
!! | TTCAAATAATTGAAATTCAC+TGG | - | chr1.4:55866749-55866768 | None:intergenic | 20.0% |
!!! | AATGTGAACTTTTTATTACA+CGG | - | chr1.4:55868869-55868888 | None:intergenic | 20.0% |
!!! | ATAATTGTCTTTCTTTTTCT+TGG | + | chr1.4:55868446-55868465 | MS.gene94817:intron | 20.0% |
!!! | GGCAAGATATTAATTATTTT+GGG | + | chr1.4:55868122-55868141 | MS.gene94817:intron | 20.0% |
!!! | TGGCAAGATATTAATTATTT+TGG | + | chr1.4:55868121-55868140 | MS.gene94817:intron | 20.0% |
!!! | TTCCATAATTTTTCTTAAAC+GGG | - | chr1.4:55867530-55867549 | None:intergenic | 20.0% |
!!! | TTTTCTAGTTTATACACAAT+TGG | - | chr1.4:55867875-55867894 | None:intergenic | 20.0% |
! | AACCTAATGAATATAAAGAC+TGG | - | chr1.4:55866675-55866694 | None:intergenic | 25.0% |
! | AAGAAAAATTATGGAATCAC+TGG | + | chr1.4:55867534-55867553 | MS.gene94817:intron | 25.0% |
! | ACTAATTCCTTTAACTAGTA+TGG | + | chr1.4:55868600-55868619 | MS.gene94817:intron | 25.0% |
! | ATCATTGGTGAAATGAAATA+TGG | - | chr1.4:55867477-55867496 | None:intergenic | 25.0% |
! | ATCCATTATATGTTATTCCA+AGG | - | chr1.4:55869042-55869061 | None:intergenic | 25.0% |
! | ATGATCATACAATTCGTATA+TGG | + | chr1.4:55871556-55871575 | MS.gene94817:CDS | 25.0% |
! | ATTAGATGTTATTGCTATCA+TGG | + | chr1.4:55869166-55869185 | MS.gene94817:intron | 25.0% |
! | CATCATTATATACCATAGAA+AGG | + | chr1.4:55867816-55867835 | MS.gene94817:intron | 25.0% |
! | CTAATTCCTTTAACTAGTAT+GGG | + | chr1.4:55868601-55868620 | MS.gene94817:intron | 25.0% |
! | CTGTAAAAATAAAGGATAGT+TGG | + | chr1.4:55868992-55869011 | MS.gene94817:intron | 25.0% |
! | GAATTAGTTAAGGAAACAAA+AGG | + | chr1.4:55869264-55869283 | MS.gene94817:intron | 25.0% |
! | GTATCTAATCAGCATATTAT+TGG | + | chr1.4:55871038-55871057 | MS.gene94817:CDS | 25.0% |
! | TAAAGAATCTTTGTTCTTGT+TGG | + | chr1.4:55867735-55867754 | MS.gene94817:intron | 25.0% |
! | TAATAGATCAATTCTGTAGA+GGG | - | chr1.4:55868093-55868112 | None:intergenic | 25.0% |
! | TCATTATATACCATAGAAAG+GGG | + | chr1.4:55867818-55867837 | MS.gene94817:intron | 25.0% |
! | TCTACAGAATTGATCTATTA+GGG | + | chr1.4:55868093-55868112 | MS.gene94817:intron | 25.0% |
! | TGATCATACAATTCGTATAT+GGG | + | chr1.4:55871557-55871576 | MS.gene94817:CDS | 25.0% |
! | TTCCTTGGAATAACATATAA+TGG | + | chr1.4:55869037-55869056 | MS.gene94817:intron | 25.0% |
! | TTTCGATATTACCTTGTAAA+TGG | - | chr1.4:55869120-55869139 | None:intergenic | 25.0% |
!! | AGAAATTCGGATTTTACATT+TGG | + | chr1.4:55871065-55871084 | MS.gene94817:CDS | 25.0% |
!! | ATTATGTCTGTATGTTTTGT+CGG | + | chr1.4:55867703-55867722 | MS.gene94817:intron | 25.0% |
!! | TCAATTTGAATGATGATGTT+GGG | + | chr1.4:55866995-55867014 | MS.gene94817:CDS | 25.0% |
!! | TTTGTTCAGTTTTCTAATAG+TGG | + | chr1.4:55868315-55868334 | MS.gene94817:CDS | 25.0% |
!! | TTTTCTTGTGTTTGCTTATT+GGG | + | chr1.4:55867665-55867684 | MS.gene94817:intron | 25.0% |
!! | TTTTTCTTGTGTTTGCTTAT+TGG | + | chr1.4:55867664-55867683 | MS.gene94817:intron | 25.0% |
!!! | CAACTATCCTTTATTTTTAC+AGG | - | chr1.4:55868994-55869013 | None:intergenic | 25.0% |
!!! | TATGGAAGGTATTATGTTAT+TGG | + | chr1.4:55868379-55868398 | MS.gene94817:intron | 25.0% |
AAACTGAGTTATGTTGGTAT+TGG | + | chr1.4:55867570-55867589 | MS.gene94817:intron | 30.0% | |
AAATGCAAACTGAGTTATGT+TGG | + | chr1.4:55867564-55867583 | MS.gene94817:intron | 30.0% | |
AACAGTAAGATCTACAACTT+TGG | - | chr1.4:55871004-55871023 | None:intergenic | 30.0% | |
AACAGTGCAAATATGTGATT+AGG | + | chr1.4:55871247-55871266 | MS.gene94817:CDS | 30.0% | |
AAGTAAGGAAAATGCTAACA+AGG | - | chr1.4:55869398-55869417 | None:intergenic | 30.0% | |
AATAATCCTTCTGATACACT+TGG | + | chr1.4:55866604-55866623 | MS.gene94817:CDS | 30.0% | |
AATATGGATGAGCATTACAT+TGG | - | chr1.4:55867461-55867480 | None:intergenic | 30.0% | |
AATATGTATGGGAACGTTAT+AGG | + | chr1.4:55869084-55869103 | MS.gene94817:intron | 30.0% | |
AATTCCATCACTGAAATTCT+CGG | + | chr1.4:55866814-55866833 | MS.gene94817:CDS | 30.0% | |
ACAGTAAGATCTACAACTTT+GGG | - | chr1.4:55871003-55871022 | None:intergenic | 30.0% | |
ACCCTAGAAAATAGAAACAA+TGG | - | chr1.4:55869930-55869949 | None:intergenic | 30.0% | |
AGTAAGGAAAATGCTAACAA+GGG | - | chr1.4:55869397-55869416 | None:intergenic | 30.0% | |
ATGATTGTACAGCTATCATA+TGG | + | chr1.4:55868361-55868380 | MS.gene94817:CDS | 30.0% | |
CAAATGTGGTAAATTGGTAA+TGG | + | chr1.4:55870622-55870641 | MS.gene94817:intron | 30.0% | |
CACAAGGCTGTATTTATAAT+AGG | - | chr1.4:55870146-55870165 | None:intergenic | 30.0% | |
CACTACATTATGTTGTAATG+AGG | - | chr1.4:55869465-55869484 | None:intergenic | 30.0% | |
CATGAGTATTTCAGAACATT+AGG | - | chr1.4:55870667-55870686 | None:intergenic | 30.0% | |
CCCTAGAAAATAGAAACAAT+GGG | - | chr1.4:55869929-55869948 | None:intergenic | 30.0% | |
CCTAGAAAATAGAAACAATG+GGG | - | chr1.4:55869928-55869947 | None:intergenic | 30.0% | |
CTAATAGATCAATTCTGTAG+AGG | - | chr1.4:55868094-55868113 | None:intergenic | 30.0% | |
CTAGAAAATAGAAACAATGG+GGG | - | chr1.4:55869927-55869946 | None:intergenic | 30.0% | |
CTCCAGTCTTTATATTCATT+AGG | + | chr1.4:55866670-55866689 | MS.gene94817:CDS | 30.0% | |
CTCTACAGAATTGATCTATT+AGG | + | chr1.4:55868092-55868111 | MS.gene94817:intron | 30.0% | |
CTGGACATAAAAATGAAGTT+TGG | + | chr1.4:55868292-55868311 | MS.gene94817:CDS | 30.0% | |
CTTTGTTAGAATCTGAATCT+GGG | + | chr1.4:55866710-55866729 | MS.gene94817:CDS | 30.0% | |
GACATAATATTAGAAAAGGC+AGG | - | chr1.4:55867691-55867710 | None:intergenic | 30.0% | |
GATCATACAATTCGTATATG+GGG | + | chr1.4:55871558-55871577 | MS.gene94817:CDS | 30.0% | |
GATTGTTTAACTGAGAATTG+TGG | + | chr1.4:55867278-55867297 | MS.gene94817:intron | 30.0% | |
GGTTAGGTGTTAATATGTAT+GGG | + | chr1.4:55869073-55869092 | MS.gene94817:intron | 30.0% | |
GTCCCGTTTAAGAAAAATTA+TGG | + | chr1.4:55867525-55867544 | MS.gene94817:intron | 30.0% | |
TATGATAGCTGTACAATCAT+TGG | - | chr1.4:55868361-55868380 | None:intergenic | 30.0% | |
TCAAACTATCAAACATCTTG+TGG | - | chr1.4:55870437-55870456 | None:intergenic | 30.0% | |
TCAATTCCAAATCTTGAGAT+TGG | - | chr1.4:55869587-55869606 | None:intergenic | 30.0% | |
TCACTTATATGATGCAGATA+AGG | - | chr1.4:55870054-55870073 | None:intergenic | 30.0% | |
TCATCAGAGTTACTAAAAGA+CGG | - | chr1.4:55867596-55867615 | None:intergenic | 30.0% | |
TCATGTTCTCAATGGAAATT+GGG | + | chr1.4:55866771-55866790 | MS.gene94817:CDS | 30.0% | |
TCTGCATCATATAAGTGATT+AGG | + | chr1.4:55870056-55870075 | MS.gene94817:intron | 30.0% | |
TCTTTGTTAGAATCTGAATC+TGG | + | chr1.4:55866709-55866728 | MS.gene94817:CDS | 30.0% | |
TGGTTAGGTGTTAATATGTA+TGG | + | chr1.4:55869072-55869091 | MS.gene94817:intron | 30.0% | |
TTCAGATTCTAACAAAGAAG+CGG | - | chr1.4:55866707-55866726 | None:intergenic | 30.0% | |
TTCTTTGCATAAGTGATTGA+TGG | + | chr1.4:55867340-55867359 | MS.gene94817:intron | 30.0% | |
TTTATGACCTGAAGACAAAA+AGG | + | chr1.4:55868947-55868966 | MS.gene94817:intron | 30.0% | |
TTTGAATCTCATGTTCTCAA+TGG | + | chr1.4:55866763-55866782 | MS.gene94817:CDS | 30.0% | |
TTTGTGCGATAAAAGTTATC+TGG | + | chr1.4:55870297-55870316 | MS.gene94817:intron | 30.0% | |
TTTGTTAGAATCTGAATCTG+GGG | + | chr1.4:55866711-55866730 | MS.gene94817:CDS | 30.0% | |
! | ACCTGCATGACATAAATTTT+GGG | - | chr1.4:55871420-55871439 | None:intergenic | 30.0% |
! | CAATTTGAATGATGATGTTG+GGG | + | chr1.4:55866996-55867015 | MS.gene94817:CDS | 30.0% |
! | CTACGAAAATAGTTTGTATC+AGG | + | chr1.4:55870252-55870271 | MS.gene94817:intron | 30.0% |
! | GTCAATTTGAATGATGATGT+TGG | + | chr1.4:55866994-55867013 | MS.gene94817:CDS | 30.0% |
! | TACCTGCATGACATAAATTT+TGG | - | chr1.4:55871421-55871440 | None:intergenic | 30.0% |
! | TATTTTCGTAGAATCAGACT+TGG | - | chr1.4:55870243-55870262 | None:intergenic | 30.0% |
! | TCAAGATTTGGAATTGATCA+AGG | + | chr1.4:55869590-55869609 | MS.gene94817:intron | 30.0% |
! | TGTTTTGTACATCTTTTCCT+TGG | + | chr1.4:55868666-55868685 | MS.gene94817:intron | 30.0% |
!! | GTGTATCTTAAGAGTTTTGT+AGG | + | chr1.4:55868924-55868943 | MS.gene94817:intron | 30.0% |
!! | TATAATGGATGTCTCTTGTT+TGG | + | chr1.4:55869052-55869071 | MS.gene94817:intron | 30.0% |
!!! | CACTACAAGAAGGTTTTTTT+TGG | - | chr1.4:55870358-55870377 | None:intergenic | 30.0% |
!!! | CCCATTGTTTCTATTTTCTA+GGG | + | chr1.4:55869926-55869945 | MS.gene94817:intron | 30.0% |
!!! | TGTTTTTAGACAGTCTGTTA+TGG | + | chr1.4:55866864-55866883 | MS.gene94817:CDS | 30.0% |
!!! | TTTTAAGTTTGTCATGAGAC+TGG | + | chr1.4:55870205-55870224 | MS.gene94817:intron | 30.0% |
!!! | TTTTTTTGGTACCATATCAC+CGG | - | chr1.4:55870344-55870363 | None:intergenic | 30.0% |
AAACCGAAATGGATGTGATA+GGG | - | chr1.4:55871125-55871144 | None:intergenic | 35.0% | |
AAATGCGAGAAACATATGGA+TGG | - | chr1.4:55868005-55868024 | None:intergenic | 35.0% | |
AACTCAACACAATTTGTGTG+CGG | + | chr1.4:55870898-55870917 | MS.gene94817:CDS | 35.0% | |
AACTCACACAATTTACAGTC+AGG | - | chr1.4:55871497-55871516 | None:intergenic | 35.0% | |
AAGCATACATTTGGGAATGA+TGG | + | chr1.4:55870844-55870863 | MS.gene94817:CDS | 35.0% | |
AAGTTCTACATGACTAGTGA+TGG | + | chr1.4:55868710-55868729 | MS.gene94817:intron | 35.0% | |
AATGCAATTTCCCCTTTCTA+TGG | - | chr1.4:55867831-55867850 | None:intergenic | 35.0% | |
AATTGGACACTGTAAGAAGA+TGG | - | chr1.4:55867858-55867877 | None:intergenic | 35.0% | |
ACAACTATCACATTCACCTT+TGG | + | chr1.4:55869827-55869846 | MS.gene94817:intron | 35.0% | |
ACCACTAGATTGAGATAGTT+TGG | - | chr1.4:55870529-55870548 | None:intergenic | 35.0% | |
ACGTAAATGCGAGAAACATA+TGG | - | chr1.4:55868009-55868028 | None:intergenic | 35.0% | |
ACTCACACAATTTACAGTCA+GGG | - | chr1.4:55871496-55871515 | None:intergenic | 35.0% | |
AGTACAATTGACCAGTTGAA+AGG | - | chr1.4:55869679-55869698 | None:intergenic | 35.0% | |
AGTTCTACATGACTAGTGAT+GGG | + | chr1.4:55868711-55868730 | MS.gene94817:intron | 35.0% | |
ATCATGCCCATACTAGTTAA+AGG | - | chr1.4:55868610-55868629 | None:intergenic | 35.0% | |
ATGTTATTGCTATCATGGAG+AGG | + | chr1.4:55869171-55869190 | MS.gene94817:intron | 35.0% | |
ATTGATCTATTAGGGCCATA+TGG | + | chr1.4:55868101-55868120 | MS.gene94817:intron | 35.0% | |
CAACTCATAATTCCTTAGAG+GGG | + | chr1.4:55869219-55869238 | MS.gene94817:intron | 35.0% | |
CAAGCTCAAATGTGGTAAAT+TGG | + | chr1.4:55870616-55870635 | MS.gene94817:intron | 35.0% | |
CAATTTACCACATTTGAGCT+TGG | - | chr1.4:55870618-55870637 | None:intergenic | 35.0% | |
CACACAAATTGTGTTGAGTT+GGG | - | chr1.4:55870898-55870917 | None:intergenic | 35.0% | |
CATCAAGTTCTCTTTCTTGT+TGG | + | chr1.4:55869737-55869756 | MS.gene94817:intron | 35.0% | |
CCAACTCATAATTCCTTAGA+GGG | + | chr1.4:55869218-55869237 | MS.gene94817:intron | 35.0% | |
CCAGTAACTAGGTTTAAGTA+AGG | - | chr1.4:55869413-55869432 | None:intergenic | 35.0% | |
CCTTACTTAAACCTAGTTAC+TGG | + | chr1.4:55869410-55869429 | MS.gene94817:intron | 35.0% | |
CTCATGTTCTCAATGGAAAT+TGG | + | chr1.4:55866770-55866789 | MS.gene94817:CDS | 35.0% | |
CTGATACACTTGGTTCAAAA+GGG | + | chr1.4:55866614-55866633 | MS.gene94817:CDS | 35.0% | |
CTTACATGATATTTGAGGAG+AGG | - | chr1.4:55868846-55868865 | None:intergenic | 35.0% | |
CTTTATGAGGATCATTCTTG+TGG | + | chr1.4:55867174-55867193 | MS.gene94817:CDS | 35.0% | |
GAGTGTGCCTGTAAAAATAA+AGG | + | chr1.4:55868984-55869003 | MS.gene94817:intron | 35.0% | |
GATAGTACATTTATTGCCAG+TGG | + | chr1.4:55871288-55871307 | MS.gene94817:CDS | 35.0% | |
GCTAACATATCACTACAAGA+AGG | - | chr1.4:55870368-55870387 | None:intergenic | 35.0% | |
GCTCATAATGTACAGGAATA+TGG | - | chr1.4:55868037-55868056 | None:intergenic | 35.0% | |
GTAAGGAAAATGCTAACAAG+GGG | - | chr1.4:55869396-55869415 | None:intergenic | 35.0% | |
GTACAATTGACCAGTTGAAA+GGG | - | chr1.4:55869678-55869697 | None:intergenic | 35.0% | |
GTTTATACAACTTGTCAGAC+AGG | + | chr1.4:55870547-55870566 | MS.gene94817:intron | 35.0% | |
TACAATATGCCGAACAAGAA+TGG | + | chr1.4:55868504-55868523 | MS.gene94817:intron | 35.0% | |
TACAGGTTGTAGTGAATAAC+TGG | - | chr1.4:55868558-55868577 | None:intergenic | 35.0% | |
TACTTAAACCTAGTTACTGG+AGG | + | chr1.4:55869413-55869432 | MS.gene94817:intron | 35.0% | |
TAGTCATGTAGAACTTGACA+AGG | - | chr1.4:55868706-55868725 | None:intergenic | 35.0% | |
TCATAGTTTGGCTAATAGTG+TGG | + | chr1.4:55866972-55866991 | MS.gene94817:CDS | 35.0% | |
TCTACATGCTCATAATGTAC+AGG | - | chr1.4:55868044-55868063 | None:intergenic | 35.0% | |
TCTGATACACTTGGTTCAAA+AGG | + | chr1.4:55866613-55866632 | MS.gene94817:CDS | 35.0% | |
TGAAACTACTGTAACTGCTT+GGG | + | chr1.4:55867110-55867129 | MS.gene94817:CDS | 35.0% | |
TGACTGTAAATTGTGTGAGT+TGG | + | chr1.4:55871496-55871515 | MS.gene94817:CDS | 35.0% | |
TGTCATGTCAATATGTGTGT+GGG | + | chr1.4:55869631-55869650 | MS.gene94817:intron | 35.0% | |
TGTCTAAATCAGATCACACA+AGG | - | chr1.4:55870162-55870181 | None:intergenic | 35.0% | |
TTAAACTTCTTCCGGTGATA+TGG | + | chr1.4:55870330-55870349 | MS.gene94817:intron | 35.0% | |
TTATGTTGTAATGAGGACTC+TGG | - | chr1.4:55869458-55869477 | None:intergenic | 35.0% | |
TTGAAACTACTGTAACTGCT+TGG | + | chr1.4:55867109-55867128 | MS.gene94817:CDS | 35.0% | |
TTGCCAATTCCATTCTTGTT+CGG | - | chr1.4:55868516-55868535 | None:intergenic | 35.0% | |
TTGTACAGCTATCATATGGA+AGG | + | chr1.4:55868365-55868384 | MS.gene94817:CDS | 35.0% | |
TTTACATTTGGCAACCAATG+CGG | + | chr1.4:55871077-55871096 | MS.gene94817:CDS | 35.0% | |
TTTCCTTAACTAATTCCCCT+GGG | - | chr1.4:55869260-55869279 | None:intergenic | 35.0% | |
TTTCTATAGCTTCCTTTGTG+AGG | + | chr1.4:55867783-55867802 | MS.gene94817:intron | 35.0% | |
TTTGAACCAAGTGTATCAGA+AGG | - | chr1.4:55866613-55866632 | None:intergenic | 35.0% | |
! | AAAATACAGCGTGTGGATTA+CGG | - | chr1.4:55871377-55871396 | None:intergenic | 35.0% |
! | AGGTATACATCTGGAATTCT+CGG | + | chr1.4:55871436-55871455 | MS.gene94817:intron | 35.0% |
! | AGTCTTTCCTTTTTGTCTTC+AGG | - | chr1.4:55868957-55868976 | None:intergenic | 35.0% |
! | CCTCTAAGGAATTATGAGTT+GGG | - | chr1.4:55869220-55869239 | None:intergenic | 35.0% |
! | CCTGCATGACATAAATTTTG+GGG | - | chr1.4:55871419-55871438 | None:intergenic | 35.0% |
! | GATTTGGAATTGATCAAGGA+TGG | + | chr1.4:55869594-55869613 | MS.gene94817:intron | 35.0% |
! | GTTTGATAGTTTGACTGTCA+AGG | + | chr1.4:55870443-55870462 | MS.gene94817:intron | 35.0% |
! | TATGTGATTAGGTCCTGTTT+TGG | + | chr1.4:55871258-55871277 | MS.gene94817:CDS | 35.0% |
! | TCGGTTTAAGGTTCATAGTT+TGG | + | chr1.4:55866960-55866979 | MS.gene94817:CDS | 35.0% |
! | TCTTTGTTCTTGTTGGTTAG+AGG | + | chr1.4:55867742-55867761 | MS.gene94817:intron | 35.0% |
! | TTTGTACATCTTTTCCTTGG+TGG | + | chr1.4:55868669-55868688 | MS.gene94817:intron | 35.0% |
!! | AAGCCAATAGAGGTTTTATC+TGG | + | chr1.4:55871465-55871484 | MS.gene94817:CDS | 35.0% |
!! | AGCCAATAGAGGTTTTATCT+GGG | + | chr1.4:55871466-55871485 | MS.gene94817:CDS | 35.0% |
!! | CTTAGTAAGCTTTAGCTTGA+GGG | + | chr1.4:55869978-55869997 | MS.gene94817:intron | 35.0% |
!! | TGTTCTGAAATACTCATGAC+AGG | + | chr1.4:55870669-55870688 | MS.gene94817:intron | 35.0% |
!! | TTAGTAAGCTTTAGCTTGAG+GGG | + | chr1.4:55869979-55869998 | MS.gene94817:intron | 35.0% |
!!! | CCCCATTGTTTCTATTTTCT+AGG | + | chr1.4:55869925-55869944 | MS.gene94817:intron | 35.0% |
AAAATCATGCCATGCACTAC+AGG | - | chr1.4:55868575-55868594 | None:intergenic | 40.0% | |
ACATTGAAACACACACTCAG+CGG | + | chr1.4:55870712-55870731 | MS.gene94817:CDS | 40.0% | |
ACTATCTGATCCACCAAAAC+AGG | - | chr1.4:55871274-55871293 | None:intergenic | 40.0% | |
AGGAATTAATGACACCACCA+AGG | - | chr1.4:55868686-55868705 | None:intergenic | 40.0% | |
ATCACCGAGAATTTCAGTGA+TGG | - | chr1.4:55866821-55866840 | None:intergenic | 40.0% | |
ATGCCGAACAAGAATGGAAT+TGG | + | chr1.4:55868510-55868529 | MS.gene94817:intron | 40.0% | |
ATGGAAACGAACTAAGAGCA+TGG | + | chr1.4:55870962-55870981 | MS.gene94817:CDS | 40.0% | |
ATGTCATGCAGGTATACATC+TGG | + | chr1.4:55871427-55871446 | MS.gene94817:intron | 40.0% | |
ATGTTGGGGATGGTGATTTA+AGG | + | chr1.4:55867010-55867029 | MS.gene94817:CDS | 40.0% | |
CACGGCTTACATGATATTTG+AGG | - | chr1.4:55868851-55868870 | None:intergenic | 40.0% | |
CCAACAATCATCGCATATTG+AGG | - | chr1.4:55869556-55869575 | None:intergenic | 40.0% | |
CCCAACTCATAATTCCTTAG+AGG | + | chr1.4:55869217-55869236 | MS.gene94817:intron | 40.0% | |
CCCCAAAATTTATGTCATGC+AGG | + | chr1.4:55871416-55871435 | MS.gene94817:intron | 40.0% | |
CCTCAATATGCGATGATTGT+TGG | + | chr1.4:55869553-55869572 | MS.gene94817:intron | 40.0% | |
CTGCTGAGCTATTAAAAGTC+GGG | + | chr1.4:55868777-55868796 | MS.gene94817:intron | 40.0% | |
CTGTCATGTCAATATGTGTG+TGG | + | chr1.4:55869630-55869649 | MS.gene94817:intron | 40.0% | |
CTTGCAGATGCTAACATTTG+TGG | - | chr1.4:55871534-55871553 | None:intergenic | 40.0% | |
GAAACCGAAATGGATGTGAT+AGG | - | chr1.4:55871126-55871145 | None:intergenic | 40.0% | |
GAATCCTGTTTCGCTTTATG+AGG | + | chr1.4:55867161-55867180 | MS.gene94817:CDS | 40.0% | |
GATAGTTTGACTGTCAAGGA+AGG | + | chr1.4:55870447-55870466 | MS.gene94817:intron | 40.0% | |
GATCTTACTGTTACTCCAGA+CGG | + | chr1.4:55871012-55871031 | MS.gene94817:CDS | 40.0% | |
GATGTTAGGGTCCATTTACA+AGG | + | chr1.4:55869106-55869125 | MS.gene94817:intron | 40.0% | |
GCACACAAATTGTGTTGAGT+TGG | - | chr1.4:55870899-55870918 | None:intergenic | 40.0% | |
GCACATGCAAGCATACATTT+GGG | + | chr1.4:55870836-55870855 | MS.gene94817:CDS | 40.0% | |
GCCAAACTATCTCAATCTAG+TGG | + | chr1.4:55870525-55870544 | MS.gene94817:intron | 40.0% | |
GCTGCTGAGCTATTAAAAGT+CGG | + | chr1.4:55868776-55868795 | MS.gene94817:intron | 40.0% | |
GGGAACGTTATAGGATGTTA+GGG | + | chr1.4:55869093-55869112 | MS.gene94817:intron | 40.0% | |
GTTTCCTTAACTAATTCCCC+TGG | - | chr1.4:55869261-55869280 | None:intergenic | 40.0% | |
TATCTTGTCTGGAAGTTCCT+TGG | + | chr1.4:55869022-55869041 | MS.gene94817:intron | 40.0% | |
TCAAGGATGGAAATAGAAGC+AGG | + | chr1.4:55869607-55869626 | MS.gene94817:intron | 40.0% | |
TGACGAAAAAATACAGCGTG+TGG | - | chr1.4:55871384-55871403 | None:intergenic | 40.0% | |
TGACTGTAGCAAAGATGGTT+GGG | - | chr1.4:55869867-55869886 | None:intergenic | 40.0% | |
TGATCCTCATAAAGCGAAAC+AGG | - | chr1.4:55867168-55867187 | None:intergenic | 40.0% | |
TGCCCAGATAAAACCTCTAT+TGG | - | chr1.4:55871471-55871490 | None:intergenic | 40.0% | |
TGCTGAGCTATTAAAAGTCG+GGG | + | chr1.4:55868778-55868797 | MS.gene94817:intron | 40.0% | |
TGGGAACGTTATAGGATGTT+AGG | + | chr1.4:55869092-55869111 | MS.gene94817:intron | 40.0% | |
TGTCAGAGAATAGATCTCAC+CGG | - | chr1.4:55869810-55869829 | None:intergenic | 40.0% | |
TGTGAAGCTAATCCTCACAA+AGG | - | chr1.4:55867798-55867817 | None:intergenic | 40.0% | |
TGTTGGGGATGGTGATTTAA+GGG | + | chr1.4:55867011-55867030 | MS.gene94817:CDS | 40.0% | |
TTATGCTCCAAGCTCAAATG+TGG | + | chr1.4:55870608-55870627 | MS.gene94817:intron | 40.0% | |
TTCCTTAACTAATTCCCCTG+GGG | - | chr1.4:55869259-55869278 | None:intergenic | 40.0% | |
TTGGAGCTCATTATCTTGTC+TGG | + | chr1.4:55869011-55869030 | MS.gene94817:intron | 40.0% | |
TTTAAGGGGGAAGTTGTTGA+TGG | + | chr1.4:55867026-55867045 | MS.gene94817:CDS | 40.0% | |
! | CCCTCTAAGGAATTATGAGT+TGG | - | chr1.4:55869221-55869240 | None:intergenic | 40.0% |
! | GCTAACATTTGTGGCCTTTT+AGG | - | chr1.4:55871525-55871544 | None:intergenic | 40.0% |
! | GTGTGAGTTGGAATCCTAAA+AGG | + | chr1.4:55871508-55871527 | MS.gene94817:CDS | 40.0% |
! | GTTATGGAGTATTTGAAGCG+TGG | + | chr1.4:55866880-55866899 | MS.gene94817:CDS | 40.0% |
! | TAGTGATGGGAAAGTCTTTC+AGG | + | chr1.4:55868724-55868743 | MS.gene94817:intron | 40.0% |
! | TCAACGTGCTGTATCTTTTG+TGG | + | chr1.4:55870738-55870757 | MS.gene94817:CDS | 40.0% |
! | TGGATGTCTCTTGTTTGGTT+AGG | + | chr1.4:55869057-55869076 | MS.gene94817:intron | 40.0% |
! | TTGAATGATGATGTTGGGGA+TGG | + | chr1.4:55867000-55867019 | MS.gene94817:CDS | 40.0% |
!! | AAGCTTTAAGCCTGTCACAA+TGG | - | chr1.4:55869961-55869980 | None:intergenic | 40.0% |
!! | ACATTTTAGGAGACTTGTCC+TGG | + | chr1.4:55868884-55868903 | MS.gene94817:intron | 40.0% |
!! | AGCTTTAAGCCTGTCACAAT+GGG | - | chr1.4:55869960-55869979 | None:intergenic | 40.0% |
!! | CATTTTAGGAGACTTGTCCT+GGG | + | chr1.4:55868885-55868904 | MS.gene94817:intron | 40.0% |
!! | GCTTAGTAAGCTTTAGCTTG+AGG | + | chr1.4:55869977-55869996 | MS.gene94817:intron | 40.0% |
!! | GTTTAGCTTTGGATGTGTTG+AGG | + | chr1.4:55866911-55866930 | MS.gene94817:CDS | 40.0% |
!!! | ACATGGAAGTTTTGAAGCTG+TGG | + | chr1.4:55870800-55870819 | MS.gene94817:CDS | 40.0% |
!!! | CATGGAAGTTTTGAAGCTGT+GGG | + | chr1.4:55870801-55870820 | MS.gene94817:CDS | 40.0% |
!!! | GAATTGTGGCATGCTGTTTT+AGG | + | chr1.4:55867292-55867311 | MS.gene94817:intron | 40.0% |
AAGAAGCCACTGAGGTATAC+TGG | + | chr1.4:55871219-55871238 | MS.gene94817:CDS | 45.0% | |
AAGCTGTGGGATGTTGAAAC+TGG | + | chr1.4:55870814-55870833 | MS.gene94817:CDS | 45.0% | |
ACACCAAGTTGCTCACTTGT+GGG | + | chr1.4:55870776-55870795 | MS.gene94817:CDS | 45.0% | |
ACCAGTTGAAAGGGAATGAC+AGG | - | chr1.4:55869669-55869688 | None:intergenic | 45.0% | |
ACCATCAGCAGAAACCGAAA+TGG | - | chr1.4:55871136-55871155 | None:intergenic | 45.0% | |
AGAATAGATCTCACCGGAGA+AGG | - | chr1.4:55869804-55869823 | None:intergenic | 45.0% | |
ATATGCGATGATTGTTGGCC+TGG | + | chr1.4:55869558-55869577 | MS.gene94817:intron | 45.0% | |
ATCTGCATGTGGGATTGTGA+TGG | + | chr1.4:55870943-55870962 | MS.gene94817:CDS | 45.0% | |
ATCTTTGCTACAGTCACCTC+CGG | + | chr1.4:55869871-55869890 | MS.gene94817:intron | 45.0% | |
ATGGAAAGTTGTAGCACAGC+CGG | - | chr1.4:55869893-55869912 | None:intergenic | 45.0% | |
CAGTGGCAGTGAAAATTCAG+AGG | + | chr1.4:55871305-55871324 | MS.gene94817:CDS | 45.0% | |
CATGACAGGTGCAAGAAGAT+GGG | + | chr1.4:55870683-55870702 | MS.gene94817:intron | 45.0% | |
CATTGAAACACACACTCAGC+GGG | + | chr1.4:55870713-55870732 | MS.gene94817:CDS | 45.0% | |
CATTGTCAATCTGAACAGCC+AGG | + | chr1.4:55871164-55871183 | MS.gene94817:CDS | 45.0% | |
CCAGTTGAAAGGGAATGACA+GGG | - | chr1.4:55869668-55869687 | None:intergenic | 45.0% | |
CTGATTAGATACTCTCCGTC+TGG | - | chr1.4:55871030-55871049 | None:intergenic | 45.0% | |
GCACCCTATCACATCCATTT+CGG | + | chr1.4:55871119-55871138 | MS.gene94817:CDS | 45.0% | |
GGCACATGCAAGCATACATT+TGG | + | chr1.4:55870835-55870854 | MS.gene94817:CDS | 45.0% | |
GTAGTGAACCTCCAGTAACT+AGG | - | chr1.4:55869424-55869443 | None:intergenic | 45.0% | |
GTGACTGTAGCAAAGATGGT+TGG | - | chr1.4:55869868-55869887 | None:intergenic | 45.0% | |
GTTGGGGATGGTGATTTAAG+GGG | + | chr1.4:55867012-55867031 | MS.gene94817:CDS | 45.0% | |
GTTTCCTACTACAACCACTC+AGG | + | chr1.4:55867206-55867225 | MS.gene94817:CDS | 45.0% | |
TACTACAACCACTCAGGTGT+GGG | + | chr1.4:55867212-55867231 | MS.gene94817:intron | 45.0% | |
TCACTACAACCTGTAGTGCA+TGG | + | chr1.4:55868563-55868582 | MS.gene94817:intron | 45.0% | |
TCATGACAGGTGCAAGAAGA+TGG | + | chr1.4:55870682-55870701 | MS.gene94817:intron | 45.0% | |
TCCATTTCGGTTTCTGCTGA+TGG | + | chr1.4:55871132-55871151 | MS.gene94817:CDS | 45.0% | |
TCGGAGTTCAAAGCCAATAG+AGG | + | chr1.4:55871455-55871474 | MS.gene94817:CDS | 45.0% | |
TGAAATGACTCGTTCCGCAT+TGG | - | chr1.4:55871094-55871113 | None:intergenic | 45.0% | |
TGGCAGCCAATCTCAAGATT+TGG | + | chr1.4:55869578-55869597 | MS.gene94817:intron | 45.0% | |
TTGGGGATGGTGATTTAAGG+GGG | + | chr1.4:55867013-55867032 | MS.gene94817:CDS | 45.0% | |
TTGTAATGAGGACTCTGGCA+AGG | - | chr1.4:55869453-55869472 | None:intergenic | 45.0% | |
TTGTGACCAGTATACCTCAG+TGG | - | chr1.4:55871228-55871247 | None:intergenic | 45.0% | |
TTTAAGCCTGTCACAATGGG+AGG | - | chr1.4:55869957-55869976 | None:intergenic | 45.0% | |
TTTCCTTAACTAGTGCCCCA+GGG | + | chr1.4:55869369-55869388 | MS.gene94817:intron | 45.0% | |
! | AAATCTTGAGATTGGCTGCC+AGG | - | chr1.4:55869579-55869598 | None:intergenic | 45.0% |
! | AACGAACTAAGAGCATGGAG+AGG | + | chr1.4:55870967-55870986 | MS.gene94817:CDS | 45.0% |
! | ACATGCAGATGCCCTTTTCA+GGG | - | chr1.4:55870933-55870952 | None:intergenic | 45.0% |
! | CCATCCGGTATTGAAATCGA+CGG | - | chr1.4:55867072-55867091 | None:intergenic | 45.0% |
! | CTCTGAATTTTCACTGCCAC+TGG | - | chr1.4:55871307-55871326 | None:intergenic | 45.0% |
! | GTGCTGTATCTTTTGTGGCA+TGG | + | chr1.4:55870743-55870762 | MS.gene94817:CDS | 45.0% |
! | TAAGAGCATGGAGAGGAATG+AGG | + | chr1.4:55870974-55870993 | MS.gene94817:CDS | 45.0% |
! | TATTTGAAGCGTGGTGAGGA+TGG | + | chr1.4:55866889-55866908 | MS.gene94817:CDS | 45.0% |
! | TGGTGAGGATGGTTTAGCTT+TGG | + | chr1.4:55866900-55866919 | MS.gene94817:CDS | 45.0% |
!! | CATTCACCTTTGGAATCCTC+CGG | + | chr1.4:55869837-55869856 | MS.gene94817:intron | 45.0% |
!! | CGTCGATTTCAATACCGGAT+GGG | + | chr1.4:55867070-55867089 | MS.gene94817:CDS | 45.0% |
!! | GGCAGTTTTGACCCTGAAAA+GGG | + | chr1.4:55870919-55870938 | MS.gene94817:CDS | 45.0% |
!! | GGGGAAGTTGTTGATGGATT+TGG | + | chr1.4:55867032-55867051 | MS.gene94817:CDS | 45.0% |
!! | GTGATTAGGTCCTGTTTTGG+TGG | + | chr1.4:55871261-55871280 | MS.gene94817:CDS | 45.0% |
!! | TCTGTATGTTTTGTCGGCTG+AGG | + | chr1.4:55867709-55867728 | MS.gene94817:intron | 45.0% |
!! | TGAAAAGGGCATCTGCATGT+GGG | + | chr1.4:55870933-55870952 | MS.gene94817:CDS | 45.0% |
!! | TTGTGTTGAGTTGGGAAACC+AGG | - | chr1.4:55870890-55870909 | None:intergenic | 45.0% |
!! | ATAAAATTATATAAATTGAT+TGG | - | chr1.4:55867639-55867658 | None:intergenic | 5.0% |
AAATAGTCCCCACACCTGAG+TGG | - | chr1.4:55867223-55867242 | None:intergenic | 50.0% | |
AAATGCTAACAAGGGGACCC+TGG | - | chr1.4:55869389-55869408 | None:intergenic | 50.0% | |
AAATGCTCCAACCTCCCATC+CGG | - | chr1.4:55867087-55867106 | None:intergenic | 50.0% | |
AATGCTAACAAGGGGACCCT+GGG | - | chr1.4:55869388-55869407 | None:intergenic | 50.0% | |
ACAGCCAGGAGATCCATATG+TGG | + | chr1.4:55871178-55871197 | MS.gene94817:CDS | 50.0% | |
ACTACAACCACTCAGGTGTG+GGG | + | chr1.4:55867213-55867232 | MS.gene94817:intron | 50.0% | |
ACTGGTCAATTGTACTGCCC+TGG | + | chr1.4:55869683-55869702 | MS.gene94817:intron | 50.0% | |
AGTGAACTCACGTAGCAGGA+TGG | - | chr1.4:55869711-55869730 | None:intergenic | 50.0% | |
ATCCATATGTGGGACGTAGC+CGG | + | chr1.4:55871189-55871208 | MS.gene94817:CDS | 50.0% | |
CAACAAATATCGCCAGTCCC+AGG | - | chr1.4:55868905-55868924 | None:intergenic | 50.0% | |
CACACCTGAGTGGTTGTAGT+AGG | - | chr1.4:55867213-55867232 | None:intergenic | 50.0% | |
CAGCCAGGAGATCCATATGT+GGG | + | chr1.4:55871179-55871198 | MS.gene94817:CDS | 50.0% | |
CAGTGGCTTCTTCCATGTAC+CGG | - | chr1.4:55871211-55871230 | None:intergenic | 50.0% | |
CCAGTCAATATCTGCAGCGA+TGG | - | chr1.4:55868276-55868295 | None:intergenic | 50.0% | |
CCATCGCTGCAGATATTGAC+TGG | + | chr1.4:55868273-55868292 | MS.gene94817:intron | 50.0% | |
CCCTGTCATTCCCTTTCAAC+TGG | + | chr1.4:55869665-55869684 | MS.gene94817:intron | 50.0% | |
CGATTTCAATACCGGATGGG+AGG | + | chr1.4:55867073-55867092 | MS.gene94817:CDS | 50.0% | |
CTACTACAACCACTCAGGTG+TGG | + | chr1.4:55867211-55867230 | MS.gene94817:intron | 50.0% | |
GACACCAAGTTGCTCACTTG+TGG | + | chr1.4:55870775-55870794 | MS.gene94817:CDS | 50.0% | |
GGAGGTGACTGTAGCAAAGA+TGG | - | chr1.4:55869872-55869891 | None:intergenic | 50.0% | |
GTACATCCTCCCATTGTGAC+AGG | + | chr1.4:55869948-55869967 | MS.gene94817:intron | 50.0% | |
GTACATGGAAGAAGCCACTG+AGG | + | chr1.4:55871211-55871230 | MS.gene94817:CDS | 50.0% | |
GTTCCCACAAGTGAGCAACT+TGG | - | chr1.4:55870782-55870801 | None:intergenic | 50.0% | |
GTTGCTCACTTGTGGGAACA+TGG | + | chr1.4:55870783-55870802 | MS.gene94817:CDS | 50.0% | |
GTTTCCTTAACTAGTGCCCC+AGG | + | chr1.4:55869368-55869387 | MS.gene94817:intron | 50.0% | |
TGCCCCAGGGGAATTAGTTA+AGG | + | chr1.4:55869254-55869273 | MS.gene94817:intron | 50.0% | |
TGCGGAACGAGTCATTTCAG+AGG | + | chr1.4:55871095-55871114 | MS.gene94817:CDS | 50.0% | |
TTAGTTAGCACGCCCCTCTA+AGG | - | chr1.4:55869234-55869253 | None:intergenic | 50.0% | |
TTCAATACCGGATGGGAGGT+TGG | + | chr1.4:55867077-55867096 | MS.gene94817:CDS | 50.0% | |
TTGTTGTCAGCTCATGTGCC+TGG | + | chr1.4:55870869-55870888 | MS.gene94817:CDS | 50.0% | |
TTTCTGCGTTGCGTGTGGAT+CGG | + | chr1.4:55866941-55866960 | MS.gene94817:CDS | 50.0% | |
! | CACATGCAGATGCCCTTTTC+AGG | - | chr1.4:55870934-55870953 | None:intergenic | 50.0% |
! | GGAGTATTTGAAGCGTGGTG+AGG | + | chr1.4:55866885-55866904 | MS.gene94817:CDS | 50.0% |
! | GTTGCGTGTGGATCGGTTTA+AGG | + | chr1.4:55866948-55866967 | MS.gene94817:CDS | 50.0% |
! | TCCGGTATTGAAATCGACGG+AGG | - | chr1.4:55867069-55867088 | None:intergenic | 50.0% |
!! | CCGTCGATTTCAATACCGGA+TGG | + | chr1.4:55867069-55867088 | MS.gene94817:CDS | 50.0% |
!! | CGGCAGTTTTGACCCTGAAA+AGG | + | chr1.4:55870918-55870937 | MS.gene94817:CDS | 50.0% |
!! | CTGAAAAGGGCATCTGCATG+TGG | + | chr1.4:55870932-55870951 | MS.gene94817:CDS | 50.0% |
!! | GCCTCCGTCGATTTCAATAC+CGG | + | chr1.4:55867065-55867084 | MS.gene94817:CDS | 50.0% |
!! | GTGAGCAACTTGGTGTCATC+AGG | - | chr1.4:55870772-55870791 | None:intergenic | 50.0% |
ATGCTAACAAGGGGACCCTG+GGG | - | chr1.4:55869387-55869406 | None:intergenic | 55.0% | |
CACGTAGCAGGATGGAACCA+GGG | - | chr1.4:55869703-55869722 | None:intergenic | 55.0% | |
CGTCCCACATATGGATCTCC+TGG | - | chr1.4:55871185-55871204 | None:intergenic | 55.0% | |
CGTGCTAACTAATGCCCCAG+GGG | + | chr1.4:55869242-55869261 | MS.gene94817:intron | 55.0% | |
GAAAGTTGTAGCACAGCCGG+AGG | - | chr1.4:55869890-55869909 | None:intergenic | 55.0% | |
GCACAGTGAACTCACGTAGC+AGG | - | chr1.4:55869715-55869734 | None:intergenic | 55.0% | |
GCGTGCTAACTAATGCCCCA+GGG | + | chr1.4:55869241-55869260 | MS.gene94817:intron | 55.0% | |
TAGGAGACTTGTCCTGGGAC+TGG | + | chr1.4:55868890-55868909 | MS.gene94817:intron | 55.0% | |
TCACGTAGCAGGATGGAACC+AGG | - | chr1.4:55869704-55869723 | None:intergenic | 55.0% | |
! | AATGGGGGTGTAGCTGCAGA+TGG | - | chr1.4:55869912-55869931 | None:intergenic | 55.0% |
! | GGATGGGAGGTTGGAGCATT+TGG | + | chr1.4:55867086-55867105 | MS.gene94817:CDS | 55.0% |
! | TACCGGCTACGTCCCACATA+TGG | - | chr1.4:55871194-55871213 | None:intergenic | 55.0% |
ACGCGTTTCTGCGTTGCGTG+TGG | + | chr1.4:55866936-55866955 | MS.gene94817:CDS | 60.0% | |
GCAAAGATGGTTGGGCTCGC+CGG | - | chr1.4:55869859-55869878 | None:intergenic | 60.0% | |
GGCGTGCTAACTAATGCCCC+AGG | + | chr1.4:55869240-55869259 | MS.gene94817:intron | 60.0% | |
TGTGGGACGTAGCCGGTACA+TGG | + | chr1.4:55871196-55871215 | MS.gene94817:CDS | 60.0% | |
! | GGACCCTGGGGCACTAGTTA+AGG | - | chr1.4:55869375-55869394 | None:intergenic | 60.0% |
AAGATGGTTGGGCTCGCCGG+AGG | - | chr1.4:55869856-55869875 | None:intergenic | 65.0% | |
GGCTCGCCGGAGGATTCCAA+AGG | - | chr1.4:55869846-55869865 | None:intergenic | 65.0% | |
TCGACCACACGCGCCTTCTC+CGG | + | chr1.4:55869788-55869807 | MS.gene94817:intron | 65.0% | |
! | CTCACCGGAGAAGGCGCGTG+TGG | - | chr1.4:55869795-55869814 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 55866595 | 55871593 | 55866595 | ID=MS.gene94817 |
chr1.4 | mRNA | 55866595 | 55871593 | 55866595 | ID=MS.gene94817.t1;Parent=MS.gene94817 |
chr1.4 | exon | 55866595 | 55867227 | 55866595 | ID=MS.gene94817.t1.exon1;Parent=MS.gene94817.t1 |
chr1.4 | CDS | 55866595 | 55867227 | 55866595 | ID=cds.MS.gene94817.t1;Parent=MS.gene94817.t1 |
chr1.4 | exon | 55868285 | 55868386 | 55868285 | ID=MS.gene94817.t1.exon2;Parent=MS.gene94817.t1 |
chr1.4 | CDS | 55868285 | 55868386 | 55868285 | ID=cds.MS.gene94817.t1;Parent=MS.gene94817.t1 |
chr1.4 | exon | 55870691 | 55871326 | 55870691 | ID=MS.gene94817.t1.exon3;Parent=MS.gene94817.t1 |
chr1.4 | CDS | 55870691 | 55871326 | 55870691 | ID=cds.MS.gene94817.t1;Parent=MS.gene94817.t1 |
chr1.4 | exon | 55871438 | 55871593 | 55871438 | ID=MS.gene94817.t1.exon4;Parent=MS.gene94817.t1 |
chr1.4 | CDS | 55871438 | 55871593 | 55871438 | ID=cds.MS.gene94817.t1;Parent=MS.gene94817.t1 |
Gene Sequence |
Protein sequence |