Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059032.t1 | XP_013468406.1 | 96.4 | 506 | 17 | 1 | 3 | 507 | 2 | 507 | 3.90E-291 | 1010 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059032.t1 | Q9FND4 | 64.4 | 514 | 172 | 3 | 3 | 505 | 2 | 515 | 4.2e-201 | 702.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059032.t1 | A0A072VM11 | 96.4 | 506 | 17 | 1 | 3 | 507 | 2 | 507 | 2.8e-291 | 1010.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059032 | MS.gene54815 | 0.816822 | 4.54E-52 | -1.69E-46 |
| MS.gene059032 | MS.gene94817 | 0.87693 | 9.44E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059032 | MS.gene58365 | PPI |
| MS.gene059032 | MS.gene71874 | PPI |
| MS.gene017032 | MS.gene059032 | PPI |
| MS.gene019162 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene71248 | PPI |
| MS.gene33341 | MS.gene059032 | PPI |
| MS.gene05876 | MS.gene059032 | PPI |
| MS.gene79525 | MS.gene059032 | PPI |
| MS.gene53517 | MS.gene059032 | PPI |
| MS.gene47995 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene049080 | PPI |
| MS.gene059032 | MS.gene060690 | PPI |
| MS.gene060688 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene47674 | PPI |
| MS.gene033999 | MS.gene059032 | PPI |
| MS.gene46950 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene33343 | PPI |
| MS.gene059032 | MS.gene034002 | PPI |
| MS.gene059032 | MS.gene053443 | PPI |
| MS.gene24891 | MS.gene059032 | PPI |
| MS.gene038240 | MS.gene059032 | PPI |
| MS.gene015797 | MS.gene059032 | PPI |
| MS.gene05950 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene073888 | PPI |
| MS.gene79528 | MS.gene059032 | PPI |
| MS.gene22216 | MS.gene059032 | PPI |
| MS.gene059032 | MS.gene059767 | PPI |
| MS.gene015792 | MS.gene059032 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059032.t1 | MTR_1g069345 | 96.443 | 506 | 17 | 1 | 3 | 507 | 2 | 507 | 0.0 | 1005 |
| MS.gene059032.t1 | MTR_5g090420 | 48.096 | 499 | 253 | 3 | 9 | 504 | 54 | 549 | 1.19e-156 | 458 |
| MS.gene059032.t1 | MTR_3g449990 | 46.548 | 507 | 260 | 4 | 7 | 504 | 52 | 556 | 8.83e-156 | 456 |
| MS.gene059032.t1 | MTR_1g072140 | 30.592 | 304 | 199 | 8 | 205 | 503 | 16 | 312 | 1.87e-34 | 132 |
| MS.gene059032.t1 | MTR_4g119620 | 31.731 | 312 | 194 | 11 | 205 | 503 | 16 | 321 | 1.98e-33 | 129 |
| MS.gene059032.t1 | MTR_8g092620 | 26.073 | 303 | 214 | 8 | 202 | 503 | 4 | 297 | 7.35e-22 | 96.3 |
| MS.gene059032.t1 | MTR_3g449950 | 35.028 | 177 | 107 | 1 | 8 | 176 | 46 | 222 | 9.86e-21 | 93.2 |
| MS.gene059032.t1 | MTR_7g086360 | 26.059 | 307 | 198 | 10 | 211 | 502 | 50 | 342 | 2.17e-20 | 92.8 |
| MS.gene059032.t1 | MTR_8g092620 | 25.249 | 301 | 215 | 7 | 202 | 501 | 11 | 302 | 5.62e-20 | 91.3 |
| MS.gene059032.t1 | MTR_4g102520 | 25.325 | 308 | 215 | 10 | 205 | 503 | 283 | 584 | 2.98e-16 | 82.0 |
| MS.gene059032.t1 | MTR_1g097140 | 24.776 | 335 | 204 | 12 | 210 | 503 | 74 | 401 | 6.80e-15 | 77.0 |
| MS.gene059032.t1 | MTR_4g105700 | 24.375 | 320 | 196 | 8 | 224 | 503 | 162 | 475 | 1.12e-14 | 77.4 |
| MS.gene059032.t1 | MTR_6g004040 | 29.870 | 154 | 103 | 2 | 210 | 363 | 95 | 243 | 1.89e-14 | 76.6 |
| MS.gene059032.t1 | MTR_3g052220 | 21.143 | 525 | 362 | 19 | 16 | 505 | 6 | 513 | 4.51e-13 | 72.0 |
| MS.gene059032.t1 | MTR_8g467040 | 23.975 | 317 | 220 | 10 | 202 | 503 | 105 | 415 | 2.31e-12 | 69.3 |
| MS.gene059032.t1 | MTR_5g022690 | 22.744 | 277 | 193 | 6 | 243 | 503 | 162 | 433 | 5.35e-12 | 68.6 |
| MS.gene059032.t1 | MTR_4g095058 | 32.192 | 146 | 84 | 5 | 209 | 344 | 404 | 544 | 8.45e-12 | 67.8 |
| MS.gene059032.t1 | MTR_4g095058 | 32.192 | 146 | 84 | 5 | 209 | 344 | 406 | 546 | 8.63e-12 | 67.8 |
| MS.gene059032.t1 | MTR_3g106080 | 34.711 | 121 | 72 | 4 | 214 | 333 | 459 | 573 | 1.38e-11 | 67.4 |
| MS.gene059032.t1 | MTR_1g072740 | 25.391 | 256 | 178 | 8 | 204 | 451 | 281 | 531 | 4.29e-11 | 65.9 |
| MS.gene059032.t1 | MTR_2g012630 | 28.205 | 156 | 105 | 4 | 210 | 364 | 94 | 243 | 7.62e-11 | 65.5 |
| MS.gene059032.t1 | MTR_2g012630 | 28.205 | 156 | 105 | 4 | 210 | 364 | 94 | 243 | 8.63e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059032.t1 | AT5G43920 | 64.833 | 509 | 168 | 3 | 8 | 505 | 7 | 515 | 0.0 | 698 |
| MS.gene059032.t1 | AT5G08560 | 46.457 | 508 | 259 | 4 | 8 | 504 | 55 | 560 | 3.00e-161 | 470 |
| MS.gene059032.t1 | AT5G08560 | 46.457 | 508 | 259 | 4 | 8 | 504 | 55 | 560 | 3.00e-161 | 470 |
| MS.gene059032.t1 | AT5G08560 | 46.457 | 508 | 259 | 4 | 8 | 504 | 55 | 560 | 3.00e-161 | 470 |
| MS.gene059032.t1 | AT3G49660 | 32.248 | 307 | 193 | 11 | 205 | 503 | 13 | 312 | 2.43e-32 | 126 |
| MS.gene059032.t1 | AT4G02730 | 30.619 | 307 | 196 | 11 | 205 | 503 | 32 | 329 | 2.07e-26 | 110 |
| MS.gene059032.t1 | AT5G64730 | 27.152 | 302 | 210 | 7 | 203 | 503 | 5 | 297 | 4.48e-24 | 102 |
| MS.gene059032.t1 | AT2G43770 | 24.194 | 310 | 200 | 11 | 211 | 502 | 48 | 340 | 3.85e-20 | 92.0 |
| MS.gene059032.t1 | AT1G10580 | 26.059 | 307 | 214 | 8 | 205 | 503 | 271 | 572 | 2.31e-18 | 88.6 |
| MS.gene059032.t1 | AT5G08390 | 30.519 | 154 | 102 | 2 | 210 | 363 | 95 | 243 | 1.37e-14 | 77.0 |
| MS.gene059032.t1 | AT3G27640 | 23.611 | 288 | 173 | 10 | 259 | 503 | 126 | 409 | 1.06e-13 | 73.9 |
| MS.gene059032.t1 | AT3G27640 | 23.529 | 289 | 174 | 10 | 259 | 504 | 107 | 391 | 1.14e-13 | 73.9 |
| MS.gene059032.t1 | AT5G56130 | 23.179 | 302 | 210 | 8 | 204 | 497 | 8 | 295 | 1.32e-13 | 72.4 |
| MS.gene059032.t1 | AT1G73720 | 21.195 | 519 | 368 | 15 | 16 | 505 | 5 | 511 | 1.93e-13 | 73.2 |
| MS.gene059032.t1 | AT2G41500 | 24.621 | 264 | 189 | 6 | 243 | 503 | 237 | 493 | 4.14e-13 | 72.0 |
| MS.gene059032.t1 | AT2G41500 | 24.621 | 264 | 189 | 6 | 243 | 503 | 237 | 493 | 4.14e-13 | 72.0 |
| MS.gene059032.t1 | AT5G54520 | 25.723 | 311 | 204 | 11 | 203 | 495 | 147 | 448 | 1.01e-12 | 70.5 |
| MS.gene059032.t1 | AT5G25150 | 35.833 | 120 | 72 | 2 | 214 | 333 | 458 | 572 | 1.84e-12 | 70.1 |
| MS.gene059032.t1 | AT5G25150 | 25.701 | 214 | 150 | 5 | 211 | 421 | 413 | 620 | 3.31e-11 | 66.2 |
| MS.gene059032.t1 | AT5G25150 | 35.833 | 120 | 72 | 2 | 214 | 333 | 458 | 572 | 1.87e-12 | 70.1 |
| MS.gene059032.t1 | AT5G25150 | 25.701 | 214 | 150 | 5 | 211 | 421 | 413 | 620 | 3.44e-11 | 66.2 |
| MS.gene059032.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 210 | 363 | 95 | 243 | 2.86e-12 | 69.7 |
| MS.gene059032.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 210 | 363 | 95 | 243 | 2.93e-12 | 69.7 |
| MS.gene059032.t1 | AT5G23430 | 27.922 | 154 | 106 | 2 | 210 | 363 | 95 | 243 | 2.93e-12 | 69.7 |
| MS.gene059032.t1 | AT5G67320 | 24.519 | 208 | 110 | 4 | 212 | 373 | 361 | 567 | 5.12e-12 | 68.9 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 518 | 786 | 1.49e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 518 | 786 | 1.49e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 518 | 786 | 1.49e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 518 | 786 | 1.49e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 518 | 786 | 1.49e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 537 | 805 | 1.61e-11 | 67.4 |
| MS.gene059032.t1 | AT2G32700 | 23.158 | 285 | 198 | 12 | 224 | 503 | 516 | 784 | 1.78e-11 | 67.4 |
| MS.gene059032.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 210 | 368 | 52 | 205 | 1.84e-11 | 67.4 |
| MS.gene059032.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 1.85e-11 | 67.4 |
| MS.gene059032.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 1.90e-11 | 67.4 |
| MS.gene059032.t1 | AT1G11160 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 1.94e-11 | 67.4 |
| MS.gene059032.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 2.25e-11 | 67.0 |
| MS.gene059032.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 3.03e-11 | 66.6 |
| MS.gene059032.t1 | AT1G61210 | 28.302 | 159 | 109 | 2 | 210 | 368 | 94 | 247 | 3.16e-11 | 66.6 |
Find 122 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCGTGTGGATCGGTTTA+AGG | 0.154853 | 1.2:+52217388 | MS.gene059032:CDS |
| CTCATGTTCTCAATGGAAAT+TGG | 0.169730 | 1.2:+52217210 | MS.gene059032:CDS |
| ATGATGGGGATGGTGATTTA+AGG | 0.192414 | 1.2:+52217447 | MS.gene059032:CDS |
| TCTTTGTTAGAATCTGAATC+TGG | 0.256899 | 1.2:+52217149 | MS.gene059032:CDS |
| GGGGAAGTTGTTGATGGATT+TGG | 0.271980 | 1.2:+52217469 | MS.gene059032:CDS |
| GTATCTAATCAGCATATTAT+TGG | 0.286140 | 1.2:+52221476 | MS.gene059032:CDS |
| GGATGGGAGGTTGGAGCATT+TGG | 0.313462 | 1.2:+52217523 | MS.gene059032:CDS |
| ATGATCATACAATTCGTATA+TGG | 0.316168 | 1.2:+52221994 | MS.gene059032:CDS |
| AACAGTAAGATCTACAACTT+TGG | 0.350301 | 1.2:-52221439 | None:intergenic |
| TCGGTTTAAGGTTCATAGTT+TGG | 0.352737 | 1.2:+52217400 | MS.gene059032:CDS |
| GTGTGAGTTGGAATCCTAAA+AGG | 0.354015 | 1.2:+52221946 | MS.gene059032:CDS |
| GCACCCTATCACATCCATTT+CGG | 0.373837 | 1.2:+52221557 | MS.gene059032:CDS |
| GGCACATGCAAGCATACATT+TGG | 0.379697 | 1.2:+52221273 | MS.gene059032:CDS |
| CTCCAGTCTTTATATTCATT+AGG | 0.380177 | 1.2:+52217110 | MS.gene059032:CDS |
| TATGATAGCTGTACAATCAT+TGG | 0.395715 | 1.2:-52218796 | None:intergenic |
| TTCAAATAATTGAAATTCAC+TGG | 0.396303 | 1.2:-52217186 | None:intergenic |
| TCTGATACACTTGGTTCAAA+AGG | 0.396779 | 1.2:+52217053 | MS.gene059032:CDS |
| TTGTTGTCAGCTCATGTGCC+TGG | 0.397599 | 1.2:+52221307 | MS.gene059032:CDS |
| TTTGAATCTCATGTTCTCAA+TGG | 0.398311 | 1.2:+52217203 | MS.gene059032:CDS |
| TGATCCTCATAAAGCGAAAC+AGG | 0.402100 | 1.2:-52217602 | None:intergenic |
| GAAACCGAAATGGATGTGAT+AGG | 0.405173 | 1.2:-52221561 | None:intergenic |
| CTTTGTTAGAATCTGAATCT+GGG | 0.411797 | 1.2:+52217150 | MS.gene059032:CDS |
| TATTATTGGATAAAGAAATT+CGG | 0.420368 | 1.2:+52221490 | MS.gene059032:CDS |
| TCATGTTCTCAATGGAAATT+GGG | 0.422581 | 1.2:+52217211 | MS.gene059032:CDS |
| CTTGCAGATGCTAACATTTG+TGG | 0.423994 | 1.2:-52221969 | None:intergenic |
| TCCATTTCGGTTTCTGCTGA+TGG | 0.424486 | 1.2:+52221570 | MS.gene059032:CDS |
| ACTATCTGATCCACCAAAAC+AGG | 0.432506 | 1.2:-52221709 | None:intergenic |
| AATTCCATCACTGAAATTCT+CGG | 0.433423 | 1.2:+52217254 | MS.gene059032:CDS |
| TGCCCAGATAAAACCTCTAT+TGG | 0.433743 | 1.2:-52221906 | None:intergenic |
| TACCGGCTACGTCCCACATA+TGG | 0.434480 | 1.2:-52221629 | None:intergenic |
| AACAGTGCAAATATGTGATT+AGG | 0.435394 | 1.2:+52221685 | MS.gene059032:CDS |
| TGATCATACAATTCGTATAT+GGG | 0.440898 | 1.2:+52221995 | MS.gene059032:CDS |
| GAATCCTGTTTCGCTTTATG+AGG | 0.441902 | 1.2:+52217598 | MS.gene059032:CDS |
| GTGAGCAACTTGGTGTCATC+AGG | 0.450464 | 1.2:-52221207 | None:intergenic |
| CACACAAATTGTGTTGAGTT+GGG | 0.450918 | 1.2:-52221333 | None:intergenic |
| ATGATTGTACAGCTATCATA+TGG | 0.454185 | 1.2:+52218799 | MS.gene059032:CDS |
| AAGCATACATTTGGGAATGA+TGG | 0.454570 | 1.2:+52221282 | MS.gene059032:CDS |
| TGGTGAGGATGGTTTAGCTT+TGG | 0.455755 | 1.2:+52217340 | MS.gene059032:CDS |
| CTGATACACTTGGTTCAAAA+GGG | 0.459776 | 1.2:+52217054 | MS.gene059032:CDS |
| GCCTCCGTCGATTTCAATAC+CGG | 0.460349 | 1.2:+52217502 | MS.gene059032:CDS |
| TCGGAGTTCAAAGCCAATAG+AGG | 0.460726 | 1.2:+52221893 | MS.gene059032:CDS |
| AGGTATACATCTGGAATTCT+CGG | 0.461243 | 1.2:+52221874 | MS.gene059032:intron |
| AAGAAGCCACTGAGGTATAC+TGG | 0.462412 | 1.2:+52221657 | MS.gene059032:CDS |
| ATGTCATGCAGGTATACATC+TGG | 0.463142 | 1.2:+52221865 | MS.gene059032:intron |
| AACTCACACAATTTACAGTC+AGG | 0.464438 | 1.2:-52221932 | None:intergenic |
| AAGCTGTGGGATGTTGAAAC+TGG | 0.467380 | 1.2:+52221252 | MS.gene059032:CDS |
| ACAGTAAGATCTACAACTTT+GGG | 0.468874 | 1.2:-52221438 | None:intergenic |
| TATTTGAAGCGTGGTGAGGA+TGG | 0.471192 | 1.2:+52217329 | MS.gene059032:CDS |
| TGAAACTACTGTAACTGCTT+GGG | 0.471578 | 1.2:+52217547 | MS.gene059032:CDS |
| TCATGACAGGTGCAAGAAGA+TGG | 0.473179 | 1.2:+52221120 | MS.gene059032:intron |
| CTGATTAGATACTCTCCGTC+TGG | 0.473361 | 1.2:-52221465 | None:intergenic |
| GTGGTCAATTTGAATGATGA+TGG | 0.483594 | 1.2:+52217431 | MS.gene059032:CDS |
| ACCATCAGCAGAAACCGAAA+TGG | 0.490342 | 1.2:-52221571 | None:intergenic |
| TTGTGTTGAGTTGGGAAACC+AGG | 0.493030 | 1.2:-52221325 | None:intergenic |
| CCATCGCTGCAGATATTGAC+TGG | 0.494376 | 1.2:+52218711 | MS.gene059032:intron |
| TATGTGATTAGGTCCTGTTT+TGG | 0.495271 | 1.2:+52221696 | MS.gene059032:CDS |
| CGTCCCACATATGGATCTCC+TGG | 0.498007 | 1.2:-52221620 | None:intergenic |
| TGAAATGACTCGTTCCGCAT+TGG | 0.499253 | 1.2:-52221529 | None:intergenic |
| TTGAAACTACTGTAACTGCT+TGG | 0.503071 | 1.2:+52217546 | MS.gene059032:CDS |
| GCACATGCAAGCATACATTT+GGG | 0.503407 | 1.2:+52221274 | MS.gene059032:CDS |
| TTCAATACCGGATGGGAGGT+TGG | 0.504415 | 1.2:+52217514 | MS.gene059032:CDS |
| ACACCAAGTTGCTCACTTGT+GGG | 0.504463 | 1.2:+52221214 | MS.gene059032:CDS |
| TGTGGGACGTAGCCGGTACA+TGG | 0.507750 | 1.2:+52221634 | MS.gene059032:CDS |
| TTTCTGCGTTGCGTGTGGAT+CGG | 0.517617 | 1.2:+52217381 | MS.gene059032:CDS |
| AACCTAATGAATATAAAGAC+TGG | 0.521122 | 1.2:-52217112 | None:intergenic |
| AAATGCTCCAACCTCCCATC+CGG | 0.525059 | 1.2:-52217521 | None:intergenic |
| TGATGGGGATGGTGATTTAA+GGG | 0.534874 | 1.2:+52217448 | MS.gene059032:CDS |
| GTTGCTCACTTGTGGGAACA+TGG | 0.542757 | 1.2:+52221221 | MS.gene059032:CDS |
| ATCCATATGTGGGACGTAGC+CGG | 0.545469 | 1.2:+52221627 | MS.gene059032:CDS |
| CACACCTGAGTGGTTGTAGT+AGG | 0.545496 | 1.2:-52217647 | None:intergenic |
| TAAGAGCATGGAGAGGAATG+AGG | 0.547696 | 1.2:+52221412 | MS.gene059032:CDS |
| TTTGTTAGAATCTGAATCTG+GGG | 0.549343 | 1.2:+52217151 | MS.gene059032:CDS |
| GATAGTACATTTATTGCCAG+TGG | 0.550032 | 1.2:+52221726 | MS.gene059032:CDS |
| TTCAGATTCTAACAAAGAAG+CGG | 0.551222 | 1.2:-52217144 | None:intergenic |
| ACGCGTTTCTGCGTTGCGTG+TGG | 0.551618 | 1.2:+52217376 | MS.gene059032:CDS |
| CATGACAGGTGCAAGAAGAT+GGG | 0.551858 | 1.2:+52221121 | MS.gene059032:intron |
| CAGTGGCTTCTTCCATGTAC+CGG | 0.552345 | 1.2:-52221646 | None:intergenic |
| CATTGAAACACACACTCAGC+GGG | 0.556918 | 1.2:+52221151 | MS.gene059032:CDS |
| GACACCAAGTTGCTCACTTG+TGG | 0.557860 | 1.2:+52221213 | MS.gene059032:CDS |
| TGACTGTAAATTGTGTGAGT+TGG | 0.561065 | 1.2:+52221934 | MS.gene059032:CDS |
| GCACACAAATTGTGTTGAGT+TGG | 0.567860 | 1.2:-52221334 | None:intergenic |
| AAACCGAAATGGATGTGATA+GGG | 0.569486 | 1.2:-52221560 | None:intergenic |
| TTTGAACCAAGTGTATCAGA+AGG | 0.571167 | 1.2:-52217050 | None:intergenic |
| CTGAAAAGGGCATCTGCATG+TGG | 0.572336 | 1.2:+52221370 | MS.gene059032:CDS |
| CTTTATGAGGATCATTCTTG+TGG | 0.579816 | 1.2:+52217611 | MS.gene059032:CDS |
| CATTGTCAATCTGAACAGCC+AGG | 0.580347 | 1.2:+52221602 | MS.gene059032:CDS |
| CCGTCGATTTCAATACCGGA+TGG | 0.584628 | 1.2:+52217506 | MS.gene059032:CDS |
| TGGTCAATTTGAATGATGAT+GGG | 0.585416 | 1.2:+52217432 | MS.gene059032:CDS |
| GTTCCCACAAGTGAGCAACT+TGG | 0.587680 | 1.2:-52221217 | None:intergenic |
| GTTTAGCTTTGGATGTGTTG+AGG | 0.589963 | 1.2:+52217351 | MS.gene059032:CDS |
| TTCACCGAGAATTTCAGTGA+TGG | 0.590253 | 1.2:-52217258 | None:intergenic |
| GATCTTACTGTTACTCCAGA+CGG | 0.591056 | 1.2:+52221450 | MS.gene059032:CDS |
| TCATAGTTTGGCTAATAGTG+TGG | 0.606420 | 1.2:+52217412 | MS.gene059032:CDS |
| AATAATCCTTCTGATACACT+TGG | 0.609357 | 1.2:+52217044 | MS.gene059032:CDS |
| ATGGAAACGAACTAAGAGCA+TGG | 0.613680 | 1.2:+52221400 | MS.gene059032:CDS |
| CGATTTCAATACCGGATGGG+AGG | 0.614148 | 1.2:+52217510 | MS.gene059032:CDS |
| TTGTACAGCTATCATATGGA+AGG | 0.615144 | 1.2:+52218803 | MS.gene059032:CDS |
| ATGGGGATGGTGATTTAAGG+GGG | 0.615559 | 1.2:+52217450 | MS.gene059032:CDS |
| CGTCGATTTCAATACCGGAT+GGG | 0.620992 | 1.2:+52217507 | MS.gene059032:CDS |
| GATGGGGATGGTGATTTAAG+GGG | 0.624415 | 1.2:+52217449 | MS.gene059032:CDS |
| GATCATACAATTCGTATATG+GGG | 0.635457 | 1.2:+52221996 | MS.gene059032:CDS |
| ACTCACACAATTTACAGTCA+GGG | 0.642161 | 1.2:-52221931 | None:intergenic |
| TGAAAAGGGCATCTGCATGT+GGG | 0.642317 | 1.2:+52221371 | MS.gene059032:CDS |
| ATCTGCATGTGGGATTGTGA+TGG | 0.648066 | 1.2:+52221381 | MS.gene059032:CDS |
| GGAGTATTTGAAGCGTGGTG+AGG | 0.650464 | 1.2:+52217325 | MS.gene059032:CDS |
| CAGTGGCAGTGAAAATTCAG+AGG | 0.651247 | 1.2:+52221743 | MS.gene059032:CDS |
| ACAGCCAGGAGATCCATATG+TGG | 0.653394 | 1.2:+52221616 | MS.gene059032:CDS |
| AACTCAACACAATTTGTGTG+CGG | 0.654042 | 1.2:+52221336 | MS.gene059032:CDS |
| CAGCCAGGAGATCCATATGT+GGG | 0.654626 | 1.2:+52221617 | MS.gene059032:CDS |
| TTTACATTTGGCAACCAATG+CGG | 0.654902 | 1.2:+52221515 | MS.gene059032:CDS |
| TTGTGACCAGTATACCTCAG+TGG | 0.655395 | 1.2:-52221663 | None:intergenic |
| GTTTCCTACTACAACCACTC+AGG | 0.661809 | 1.2:+52217643 | MS.gene059032:CDS |
| GTTATGGAGTATTTGAAGCG+TGG | 0.666506 | 1.2:+52217320 | MS.gene059032:CDS |
| AACGAACTAAGAGCATGGAG+AGG | 0.668734 | 1.2:+52221405 | MS.gene059032:CDS |
| TGCGGAACGAGTCATTTCAG+AGG | 0.674288 | 1.2:+52221533 | MS.gene059032:CDS |
| CCATCCGGTATTGAAATCGA+CGG | 0.682456 | 1.2:-52217506 | None:intergenic |
| ACATTGAAACACACACTCAG+CGG | 0.684546 | 1.2:+52221150 | MS.gene059032:CDS |
| AAATAGTCCCCACACCTGAG+TGG | 0.685449 | 1.2:-52217657 | None:intergenic |
| GGTCAATTTGAATGATGATG+GGG | 0.694066 | 1.2:+52217433 | MS.gene059032:CDS |
| TCCGGTATTGAAATCGACGG+AGG | 0.704177 | 1.2:-52217503 | None:intergenic |
| AATTTGAATGATGATGGGGA+TGG | 0.732905 | 1.2:+52217437 | MS.gene059032:CDS |
| GTACATGGAAGAAGCCACTG+AGG | 0.776918 | 1.2:+52221649 | MS.gene059032:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATACACATTTATATA+TGG | + | chr1.2:52219066-52219085 | MS.gene059032:intron | 10.0% |
| !! | TAATATACACATTTATATAT+GGG | + | chr1.2:52219067-52219086 | MS.gene059032:intron | 10.0% |
| !! | AAAAAGAAAGACAATTATAT+TGG | - | chr1.2:52218882-52218901 | None:intergenic | 15.0% |
| !! | TATTATTGGATAAAGAAATT+CGG | + | chr1.2:52221490-52221509 | MS.gene059032:CDS | 15.0% |
| !! | TTAATTAATACACTTAAGAA+TGG | - | chr1.2:52221775-52221794 | None:intergenic | 15.0% |
| !! | TTGTACAAAAGTAATTTATT+TGG | + | chr1.2:52217752-52217771 | MS.gene059032:intron | 15.0% |
| !! | TTTATATATTAAACTTCTTC+CGG | + | chr1.2:52220760-52220779 | MS.gene059032:intron | 15.0% |
| !!! | ATATATGTTTTGATATCTTT+CGG | + | chr1.2:52220843-52220862 | MS.gene059032:intron | 15.0% |
| !!! | ATTCCATAATTTTTCTTAAA+CGG | - | chr1.2:52217969-52217988 | None:intergenic | 15.0% |
| !!! | TAATAAAAAGTTCACATTTT+AGG | + | chr1.2:52219309-52219328 | MS.gene059032:intron | 15.0% |
| !!! | TTTATTTTTCTTACGTAATA+AGG | + | chr1.2:52218398-52218417 | MS.gene059032:intron | 15.0% |
| !! | AACTTAAAAATTCGTTGAAT+TGG | - | chr1.2:52220632-52220651 | None:intergenic | 20.0% |
| !! | AGAAAAATAAATCACTCTTA+CGG | - | chr1.2:52218389-52218408 | None:intergenic | 20.0% |
| !! | AGTGAATGAATAAATAATGA+TGG | + | chr1.2:52219919-52219938 | MS.gene059032:intron | 20.0% |
| !! | ATAATTAATATCTTGCCATA+TGG | - | chr1.2:52218557-52218576 | None:intergenic | 20.0% |
| !! | ATATCGAAAGATAAAAGAAT+AGG | + | chr1.2:52219569-52219588 | MS.gene059032:intron | 20.0% |
| !! | ATCATTATATACCATAGAAA+GGG | + | chr1.2:52218255-52218274 | MS.gene059032:intron | 20.0% |
| !! | TAAAAACTAGAAGATTAACT+TGG | - | chr1.2:52218642-52218661 | None:intergenic | 20.0% |
| !! | TACAGACATAATATTAGAAA+AGG | - | chr1.2:52218133-52218152 | None:intergenic | 20.0% |
| !! | TTATAGAATACAGAAATCAT+TGG | - | chr1.2:52217930-52217949 | None:intergenic | 20.0% |
| !! | TTCAAATAATTGAAATTCAC+TGG | - | chr1.2:52217189-52217208 | None:intergenic | 20.0% |
| !!! | AATGTGAACTTTTTATTACA+CGG | - | chr1.2:52219307-52219326 | None:intergenic | 20.0% |
| !!! | ATAATTGTCTTTCTTTTTCT+TGG | + | chr1.2:52218884-52218903 | MS.gene059032:intron | 20.0% |
| !!! | GGCAAGATATTAATTATTTT+GGG | + | chr1.2:52218560-52218579 | MS.gene059032:intron | 20.0% |
| !!! | TGGCAAGATATTAATTATTT+TGG | + | chr1.2:52218559-52218578 | MS.gene059032:intron | 20.0% |
| !!! | TTCCATAATTTTTCTTAAAC+GGG | - | chr1.2:52217968-52217987 | None:intergenic | 20.0% |
| !!! | TTTTCTAGTTTATACACAAT+TGG | - | chr1.2:52218313-52218332 | None:intergenic | 20.0% |
| ! | AAACATGAATTCATGTTCAT+CGG | - | chr1.2:52218050-52218069 | None:intergenic | 25.0% |
| ! | AACCTAATGAATATAAAGAC+TGG | - | chr1.2:52217115-52217134 | None:intergenic | 25.0% |
| ! | AAGAAAAATTATGGAATCAC+TGG | + | chr1.2:52217972-52217991 | MS.gene059032:intron | 25.0% |
| ! | ACTAATTCCTTTAACTAGTA+TGG | + | chr1.2:52219038-52219057 | MS.gene059032:intron | 25.0% |
| ! | ATCATTGGTGAAATGAAATA+TGG | - | chr1.2:52217915-52217934 | None:intergenic | 25.0% |
| ! | ATCCATTATATGTTATTCCA+AGG | - | chr1.2:52219480-52219499 | None:intergenic | 25.0% |
| ! | ATGATCATACAATTCGTATA+TGG | + | chr1.2:52221994-52222013 | MS.gene059032:CDS | 25.0% |
| ! | ATTAGATGTTATTGCTATCA+TGG | + | chr1.2:52219604-52219623 | MS.gene059032:intron | 25.0% |
| ! | CATCATTATATACCATAGAA+AGG | + | chr1.2:52218254-52218273 | MS.gene059032:intron | 25.0% |
| ! | CTAATTCCTTTAACTAGTAT+GGG | + | chr1.2:52219039-52219058 | MS.gene059032:intron | 25.0% |
| ! | CTGTAAAAATAAAGGATAGT+TGG | + | chr1.2:52219430-52219449 | MS.gene059032:intron | 25.0% |
| ! | GAATTAGTTAAGGAAACAAA+AGG | + | chr1.2:52219702-52219721 | MS.gene059032:intron | 25.0% |
| ! | GTATCTAATCAGCATATTAT+TGG | + | chr1.2:52221476-52221495 | MS.gene059032:CDS | 25.0% |
| ! | TAAAGAATCTTTGTTCTTGT+TGG | + | chr1.2:52218173-52218192 | MS.gene059032:intron | 25.0% |
| ! | TAATAGATCAATTCTGTAGA+GGG | - | chr1.2:52218531-52218550 | None:intergenic | 25.0% |
| ! | TCATTATATACCATAGAAAG+GGG | + | chr1.2:52218256-52218275 | MS.gene059032:intron | 25.0% |
| ! | TCTACAGAATTGATCTATTA+GGG | + | chr1.2:52218531-52218550 | MS.gene059032:intron | 25.0% |
| ! | TGATCATACAATTCGTATAT+GGG | + | chr1.2:52221995-52222014 | MS.gene059032:CDS | 25.0% |
| ! | TTCCTTGGAATAACATATAA+TGG | + | chr1.2:52219475-52219494 | MS.gene059032:intron | 25.0% |
| ! | TTTCGATATTACCTTGTAAA+TGG | - | chr1.2:52219558-52219577 | None:intergenic | 25.0% |
| !! | AGAAATTCGGATTTTACATT+TGG | + | chr1.2:52221503-52221522 | MS.gene059032:CDS | 25.0% |
| !! | ATTATGTCTGTATGTTTTGT+CGG | + | chr1.2:52218141-52218160 | MS.gene059032:intron | 25.0% |
| !! | TTTGTTCAGTTTTCTAATAG+TGG | + | chr1.2:52218753-52218772 | MS.gene059032:CDS | 25.0% |
| !! | TTTTCTTGTGTTTGCTTATT+GGG | + | chr1.2:52218103-52218122 | MS.gene059032:intron | 25.0% |
| !! | TTTTTCTTGTGTTTGCTTAT+TGG | + | chr1.2:52218102-52218121 | MS.gene059032:intron | 25.0% |
| !!! | CAACTATCCTTTATTTTTAC+AGG | - | chr1.2:52219432-52219451 | None:intergenic | 25.0% |
| !!! | TATGGAAGGTATTATGTTAT+TGG | + | chr1.2:52218817-52218836 | MS.gene059032:intron | 25.0% |
| AAACTGAGTTATGTTGGTAT+TGG | + | chr1.2:52218008-52218027 | MS.gene059032:intron | 30.0% | |
| AAATGCAAACTGAGTTATGT+TGG | + | chr1.2:52218002-52218021 | MS.gene059032:intron | 30.0% | |
| AACAGTAAGATCTACAACTT+TGG | - | chr1.2:52221442-52221461 | None:intergenic | 30.0% | |
| AACAGTGCAAATATGTGATT+AGG | + | chr1.2:52221685-52221704 | MS.gene059032:CDS | 30.0% | |
| AAGTAAGGAAAATGCTAACA+AGG | - | chr1.2:52219836-52219855 | None:intergenic | 30.0% | |
| AATAATCCTTCTGATACACT+TGG | + | chr1.2:52217044-52217063 | MS.gene059032:CDS | 30.0% | |
| AATATGGATGAGCATTACAT+TGG | - | chr1.2:52217899-52217918 | None:intergenic | 30.0% | |
| AATATGTATGGGAACGTTAT+AGG | + | chr1.2:52219522-52219541 | MS.gene059032:intron | 30.0% | |
| AATTCCATCACTGAAATTCT+CGG | + | chr1.2:52217254-52217273 | MS.gene059032:CDS | 30.0% | |
| ACAGTAAGATCTACAACTTT+GGG | - | chr1.2:52221441-52221460 | None:intergenic | 30.0% | |
| ACCCTAGAAAATAGAAACAA+TGG | - | chr1.2:52220368-52220387 | None:intergenic | 30.0% | |
| AGTAAGGAAAATGCTAACAA+GGG | - | chr1.2:52219835-52219854 | None:intergenic | 30.0% | |
| ATGATTGTACAGCTATCATA+TGG | + | chr1.2:52218799-52218818 | MS.gene059032:CDS | 30.0% | |
| CAAATGTGGTAAATTGGTAA+TGG | + | chr1.2:52221060-52221079 | MS.gene059032:intron | 30.0% | |
| CACAAGGCTGTATTTATAAT+AGG | - | chr1.2:52220584-52220603 | None:intergenic | 30.0% | |
| CACTACATTATGTTGTAATG+AGG | - | chr1.2:52219903-52219922 | None:intergenic | 30.0% | |
| CATGAGTATTTCAGAACATT+AGG | - | chr1.2:52221105-52221124 | None:intergenic | 30.0% | |
| CCCTAGAAAATAGAAACAAT+GGG | - | chr1.2:52220367-52220386 | None:intergenic | 30.0% | |
| CCTAGAAAATAGAAACAATG+GGG | - | chr1.2:52220366-52220385 | None:intergenic | 30.0% | |
| CTAATAGATCAATTCTGTAG+AGG | - | chr1.2:52218532-52218551 | None:intergenic | 30.0% | |
| CTAGAAAATAGAAACAATGG+GGG | - | chr1.2:52220365-52220384 | None:intergenic | 30.0% | |
| CTCCAGTCTTTATATTCATT+AGG | + | chr1.2:52217110-52217129 | MS.gene059032:CDS | 30.0% | |
| CTCTACAGAATTGATCTATT+AGG | + | chr1.2:52218530-52218549 | MS.gene059032:intron | 30.0% | |
| CTGGACATAAAAATGAAGTT+TGG | + | chr1.2:52218730-52218749 | MS.gene059032:CDS | 30.0% | |
| CTTTGTTAGAATCTGAATCT+GGG | + | chr1.2:52217150-52217169 | MS.gene059032:CDS | 30.0% | |
| GACATAATATTAGAAAAGGC+AGG | - | chr1.2:52218129-52218148 | None:intergenic | 30.0% | |
| GATCATACAATTCGTATATG+GGG | + | chr1.2:52221996-52222015 | MS.gene059032:CDS | 30.0% | |
| GATTGTTTAACTGAGAATTG+TGG | + | chr1.2:52217715-52217734 | MS.gene059032:intron | 30.0% | |
| GGTTAGGTGTTAATATGTAT+GGG | + | chr1.2:52219511-52219530 | MS.gene059032:intron | 30.0% | |
| GTCCCGTTTAAGAAAAATTA+TGG | + | chr1.2:52217963-52217982 | MS.gene059032:intron | 30.0% | |
| TATGATAGCTGTACAATCAT+TGG | - | chr1.2:52218799-52218818 | None:intergenic | 30.0% | |
| TCAAACTATCAAACATCTTG+TGG | - | chr1.2:52220875-52220894 | None:intergenic | 30.0% | |
| TCAATTCCAAATCTTGAGAT+TGG | - | chr1.2:52220025-52220044 | None:intergenic | 30.0% | |
| TCACTTATATGATGCAGATA+AGG | - | chr1.2:52220492-52220511 | None:intergenic | 30.0% | |
| TCATGTTCTCAATGGAAATT+GGG | + | chr1.2:52217211-52217230 | MS.gene059032:CDS | 30.0% | |
| TCTGCATCATATAAGTGATT+AGG | + | chr1.2:52220494-52220513 | MS.gene059032:intron | 30.0% | |
| TCTTTGTTAGAATCTGAATC+TGG | + | chr1.2:52217149-52217168 | MS.gene059032:CDS | 30.0% | |
| TGGTCAATTTGAATGATGAT+GGG | + | chr1.2:52217432-52217451 | MS.gene059032:CDS | 30.0% | |
| TGGTTAGGTGTTAATATGTA+TGG | + | chr1.2:52219510-52219529 | MS.gene059032:intron | 30.0% | |
| TTCAGATTCTAACAAAGAAG+CGG | - | chr1.2:52217147-52217166 | None:intergenic | 30.0% | |
| TTCTTTGCATAAGTGATTGA+TGG | + | chr1.2:52217777-52217796 | MS.gene059032:intron | 30.0% | |
| TTTATGACCTGAAGACAAAA+AGG | + | chr1.2:52219385-52219404 | MS.gene059032:intron | 30.0% | |
| TTTGAATCTCATGTTCTCAA+TGG | + | chr1.2:52217203-52217222 | MS.gene059032:CDS | 30.0% | |
| TTTGTGCGATAAAAGTTATC+TGG | + | chr1.2:52220735-52220754 | MS.gene059032:intron | 30.0% | |
| TTTGTTAGAATCTGAATCTG+GGG | + | chr1.2:52217151-52217170 | MS.gene059032:CDS | 30.0% | |
| ! | ACCTGCATGACATAAATTTT+GGG | - | chr1.2:52221858-52221877 | None:intergenic | 30.0% |
| ! | CTACGAAAATAGTTTGTATC+AGG | + | chr1.2:52220690-52220709 | MS.gene059032:intron | 30.0% |
| ! | TACCTGCATGACATAAATTT+TGG | - | chr1.2:52221859-52221878 | None:intergenic | 30.0% |
| ! | TATTTTCGTAGAATCAGACT+TGG | - | chr1.2:52220681-52220700 | None:intergenic | 30.0% |
| ! | TCAAGATTTGGAATTGATCA+AGG | + | chr1.2:52220028-52220047 | MS.gene059032:intron | 30.0% |
| ! | TGTTTTGTACATCTTTTCCT+TGG | + | chr1.2:52219104-52219123 | MS.gene059032:intron | 30.0% |
| !! | GTGTATCTTAAGAGTTTTGT+AGG | + | chr1.2:52219362-52219381 | MS.gene059032:intron | 30.0% |
| !! | TATAATGGATGTCTCTTGTT+TGG | + | chr1.2:52219490-52219509 | MS.gene059032:intron | 30.0% |
| !!! | CACTACAAGAAGGTTTTTTT+TGG | - | chr1.2:52220796-52220815 | None:intergenic | 30.0% |
| !!! | CCCATTGTTTCTATTTTCTA+GGG | + | chr1.2:52220364-52220383 | MS.gene059032:intron | 30.0% |
| !!! | TGTTTTTAGACAGTCTGTTA+TGG | + | chr1.2:52217304-52217323 | MS.gene059032:CDS | 30.0% |
| !!! | TTTTAAGTTTGTCATGAGAC+TGG | + | chr1.2:52220643-52220662 | MS.gene059032:intron | 30.0% |
| !!! | TTTTTTTGGTACCATATCAC+CGG | - | chr1.2:52220782-52220801 | None:intergenic | 30.0% |
| AAACCGAAATGGATGTGATA+GGG | - | chr1.2:52221563-52221582 | None:intergenic | 35.0% | |
| AAATGCGAGAAACATATGGA+TGG | - | chr1.2:52218443-52218462 | None:intergenic | 35.0% | |
| AACTCAACACAATTTGTGTG+CGG | + | chr1.2:52221336-52221355 | MS.gene059032:CDS | 35.0% | |
| AACTCACACAATTTACAGTC+AGG | - | chr1.2:52221935-52221954 | None:intergenic | 35.0% | |
| AAGCATACATTTGGGAATGA+TGG | + | chr1.2:52221282-52221301 | MS.gene059032:CDS | 35.0% | |
| AAGTTCTACATGACTAGTGA+TGG | + | chr1.2:52219148-52219167 | MS.gene059032:intron | 35.0% | |
| AATGCAATTTCCCCTTTCTA+TGG | - | chr1.2:52218269-52218288 | None:intergenic | 35.0% | |
| AATTGGACACTGTAAGAAGA+TGG | - | chr1.2:52218296-52218315 | None:intergenic | 35.0% | |
| ACAACTATCACATTCACCTT+TGG | + | chr1.2:52220265-52220284 | MS.gene059032:intron | 35.0% | |
| ACCACTAGATTGAGATAGTT+TGG | - | chr1.2:52220967-52220986 | None:intergenic | 35.0% | |
| ACGTAAATGCGAGAAACATA+TGG | - | chr1.2:52218447-52218466 | None:intergenic | 35.0% | |
| ACTCACACAATTTACAGTCA+GGG | - | chr1.2:52221934-52221953 | None:intergenic | 35.0% | |
| AGTACATTTGACCAGTTGAA+AGG | - | chr1.2:52220117-52220136 | None:intergenic | 35.0% | |
| AGTTCTACATGACTAGTGAT+GGG | + | chr1.2:52219149-52219168 | MS.gene059032:intron | 35.0% | |
| ATCATGCCCATACTAGTTAA+AGG | - | chr1.2:52219048-52219067 | None:intergenic | 35.0% | |
| ATGTTATTGCTATCATGGAG+AGG | + | chr1.2:52219609-52219628 | MS.gene059032:intron | 35.0% | |
| ATTGATCTATTAGGGCCATA+TGG | + | chr1.2:52218539-52218558 | MS.gene059032:intron | 35.0% | |
| CAACTCATAATTCCTTAGAG+GGG | + | chr1.2:52219657-52219676 | MS.gene059032:intron | 35.0% | |
| CAAGCTCAAATGTGGTAAAT+TGG | + | chr1.2:52221054-52221073 | MS.gene059032:intron | 35.0% | |
| CAATTTACCACATTTGAGCT+TGG | - | chr1.2:52221056-52221075 | None:intergenic | 35.0% | |
| CACACAAATTGTGTTGAGTT+GGG | - | chr1.2:52221336-52221355 | None:intergenic | 35.0% | |
| CATCAAGTTCTCTTTCTTGT+TGG | + | chr1.2:52220175-52220194 | MS.gene059032:intron | 35.0% | |
| CCAACTCATAATTCCTTAGA+GGG | + | chr1.2:52219656-52219675 | MS.gene059032:intron | 35.0% | |
| CCAGTAACTAGGTTTAAGTA+AGG | - | chr1.2:52219851-52219870 | None:intergenic | 35.0% | |
| CCTTACTTAAACCTAGTTAC+TGG | + | chr1.2:52219848-52219867 | MS.gene059032:intron | 35.0% | |
| CTCATGTTCTCAATGGAAAT+TGG | + | chr1.2:52217210-52217229 | MS.gene059032:CDS | 35.0% | |
| CTGATACACTTGGTTCAAAA+GGG | + | chr1.2:52217054-52217073 | MS.gene059032:CDS | 35.0% | |
| CTTACATGATATTTGAGGAG+AGG | - | chr1.2:52219284-52219303 | None:intergenic | 35.0% | |
| CTTTATGAGGATCATTCTTG+TGG | + | chr1.2:52217611-52217630 | MS.gene059032:CDS | 35.0% | |
| GAGTGTGCCTGTAAAAATAA+AGG | + | chr1.2:52219422-52219441 | MS.gene059032:intron | 35.0% | |
| GATAGTACATTTATTGCCAG+TGG | + | chr1.2:52221726-52221745 | MS.gene059032:CDS | 35.0% | |
| GCTAACATATCACTACAAGA+AGG | - | chr1.2:52220806-52220825 | None:intergenic | 35.0% | |
| GCTCATAATGTACAGGAATA+TGG | - | chr1.2:52218475-52218494 | None:intergenic | 35.0% | |
| GTAAGGAAAATGCTAACAAG+GGG | - | chr1.2:52219834-52219853 | None:intergenic | 35.0% | |
| GTACATTTGACCAGTTGAAA+GGG | - | chr1.2:52220116-52220135 | None:intergenic | 35.0% | |
| GTGGTCAATTTGAATGATGA+TGG | + | chr1.2:52217431-52217450 | MS.gene059032:CDS | 35.0% | |
| GTTTATACAACTTGTCAGAC+AGG | + | chr1.2:52220985-52221004 | MS.gene059032:intron | 35.0% | |
| TACAATATGCCGAACAAGAA+TGG | + | chr1.2:52218942-52218961 | MS.gene059032:intron | 35.0% | |
| TACAGGTTGTAGTGAATAAC+TGG | - | chr1.2:52218996-52219015 | None:intergenic | 35.0% | |
| TACTTAAACCTAGTTACTGG+AGG | + | chr1.2:52219851-52219870 | MS.gene059032:intron | 35.0% | |
| TAGTCATGTAGAACTTGACA+AGG | - | chr1.2:52219144-52219163 | None:intergenic | 35.0% | |
| TCATAGTTTGGCTAATAGTG+TGG | + | chr1.2:52217412-52217431 | MS.gene059032:CDS | 35.0% | |
| TCATCGGAGTTACTAAAAGA+CGG | - | chr1.2:52218034-52218053 | None:intergenic | 35.0% | |
| TCTACATGCTCATAATGTAC+AGG | - | chr1.2:52218482-52218501 | None:intergenic | 35.0% | |
| TCTGATACACTTGGTTCAAA+AGG | + | chr1.2:52217053-52217072 | MS.gene059032:CDS | 35.0% | |
| TGAAACTACTGTAACTGCTT+GGG | + | chr1.2:52217547-52217566 | MS.gene059032:CDS | 35.0% | |
| TGACTGTAAATTGTGTGAGT+TGG | + | chr1.2:52221934-52221953 | MS.gene059032:CDS | 35.0% | |
| TGTCATGTCAATATGTGTGT+GGG | + | chr1.2:52220069-52220088 | MS.gene059032:intron | 35.0% | |
| TGTCTAAATCAGATCACACA+AGG | - | chr1.2:52220600-52220619 | None:intergenic | 35.0% | |
| TTAAACTTCTTCCGGTGATA+TGG | + | chr1.2:52220768-52220787 | MS.gene059032:intron | 35.0% | |
| TTATGTTGTAATGAGGACTC+TGG | - | chr1.2:52219896-52219915 | None:intergenic | 35.0% | |
| TTGAAACTACTGTAACTGCT+TGG | + | chr1.2:52217546-52217565 | MS.gene059032:CDS | 35.0% | |
| TTGCCAATTCCATTCTTGTT+CGG | - | chr1.2:52218954-52218973 | None:intergenic | 35.0% | |
| TTGTACAGCTATCATATGGA+AGG | + | chr1.2:52218803-52218822 | MS.gene059032:CDS | 35.0% | |
| TTTACATTTGGCAACCAATG+CGG | + | chr1.2:52221515-52221534 | MS.gene059032:CDS | 35.0% | |
| TTTCCTTAACTAATTCCCCT+GGG | - | chr1.2:52219698-52219717 | None:intergenic | 35.0% | |
| TTTCTATAGCTTCCTTTGTG+AGG | + | chr1.2:52218221-52218240 | MS.gene059032:intron | 35.0% | |
| TTTGAACCAAGTGTATCAGA+AGG | - | chr1.2:52217053-52217072 | None:intergenic | 35.0% | |
| ! | AAAATACAGCGTGTGGATTA+CGG | - | chr1.2:52221815-52221834 | None:intergenic | 35.0% |
| ! | AGGTATACATCTGGAATTCT+CGG | + | chr1.2:52221874-52221893 | MS.gene059032:intron | 35.0% |
| ! | AGTCTTTCCTTTTTGTCTTC+AGG | - | chr1.2:52219395-52219414 | None:intergenic | 35.0% |
| ! | CCTCTAAGGAATTATGAGTT+GGG | - | chr1.2:52219658-52219677 | None:intergenic | 35.0% |
| ! | CCTGCATGACATAAATTTTG+GGG | - | chr1.2:52221857-52221876 | None:intergenic | 35.0% |
| ! | GATTTGGAATTGATCAAGGA+TGG | + | chr1.2:52220032-52220051 | MS.gene059032:intron | 35.0% |
| ! | GGTCAATTTGAATGATGATG+GGG | + | chr1.2:52217433-52217452 | MS.gene059032:CDS | 35.0% |
| ! | GTTTGATAGTTTGACTGTCA+AGG | + | chr1.2:52220881-52220900 | MS.gene059032:intron | 35.0% |
| ! | TATGTGATTAGGTCCTGTTT+TGG | + | chr1.2:52221696-52221715 | MS.gene059032:CDS | 35.0% |
| ! | TCGGTTTAAGGTTCATAGTT+TGG | + | chr1.2:52217400-52217419 | MS.gene059032:CDS | 35.0% |
| ! | TCTTTGTTCTTGTTGGTTAG+AGG | + | chr1.2:52218180-52218199 | MS.gene059032:intron | 35.0% |
| ! | TTTGTACATCTTTTCCTTGG+TGG | + | chr1.2:52219107-52219126 | MS.gene059032:intron | 35.0% |
| !! | AAGCCAATAGAGGTTTTATC+TGG | + | chr1.2:52221903-52221922 | MS.gene059032:CDS | 35.0% |
| !! | AATTTGAATGATGATGGGGA+TGG | + | chr1.2:52217437-52217456 | MS.gene059032:CDS | 35.0% |
| !! | AGCCAATAGAGGTTTTATCT+GGG | + | chr1.2:52221904-52221923 | MS.gene059032:CDS | 35.0% |
| !! | CTTAGTAAGCTTTAGCTTGA+GGG | + | chr1.2:52220416-52220435 | MS.gene059032:intron | 35.0% |
| !! | TGTTCTGAAATACTCATGAC+AGG | + | chr1.2:52221107-52221126 | MS.gene059032:intron | 35.0% |
| !! | TTAGTAAGCTTTAGCTTGAG+GGG | + | chr1.2:52220417-52220436 | MS.gene059032:intron | 35.0% |
| !!! | CCCCATTGTTTCTATTTTCT+AGG | + | chr1.2:52220363-52220382 | MS.gene059032:intron | 35.0% |
| AAAATCATGCCATGCACTAC+AGG | - | chr1.2:52219013-52219032 | None:intergenic | 40.0% | |
| ACATTGAAACACACACTCAG+CGG | + | chr1.2:52221150-52221169 | MS.gene059032:CDS | 40.0% | |
| ACTATCTGATCCACCAAAAC+AGG | - | chr1.2:52221712-52221731 | None:intergenic | 40.0% | |
| AGGAATTAATGACACCACCA+AGG | - | chr1.2:52219124-52219143 | None:intergenic | 40.0% | |
| ATGCCGAACAAGAATGGAAT+TGG | + | chr1.2:52218948-52218967 | MS.gene059032:intron | 40.0% | |
| ATGGAAACGAACTAAGAGCA+TGG | + | chr1.2:52221400-52221419 | MS.gene059032:CDS | 40.0% | |
| ATGTCATGCAGGTATACATC+TGG | + | chr1.2:52221865-52221884 | MS.gene059032:intron | 40.0% | |
| CACGGCTTACATGATATTTG+AGG | - | chr1.2:52219289-52219308 | None:intergenic | 40.0% | |
| CCAACAATCATCGCATATTG+AGG | - | chr1.2:52219994-52220013 | None:intergenic | 40.0% | |
| CCCAACTCATAATTCCTTAG+AGG | + | chr1.2:52219655-52219674 | MS.gene059032:intron | 40.0% | |
| CCCCAAAATTTATGTCATGC+AGG | + | chr1.2:52221854-52221873 | MS.gene059032:intron | 40.0% | |
| CCTCAATATGCGATGATTGT+TGG | + | chr1.2:52219991-52220010 | MS.gene059032:intron | 40.0% | |
| CTGCTGAGCTATTAAAAGTC+GGG | + | chr1.2:52219215-52219234 | MS.gene059032:intron | 40.0% | |
| CTGTCATGTCAATATGTGTG+TGG | + | chr1.2:52220068-52220087 | MS.gene059032:intron | 40.0% | |
| CTTGCAGATGCTAACATTTG+TGG | - | chr1.2:52221972-52221991 | None:intergenic | 40.0% | |
| GAAACCGAAATGGATGTGAT+AGG | - | chr1.2:52221564-52221583 | None:intergenic | 40.0% | |
| GAATCCTGTTTCGCTTTATG+AGG | + | chr1.2:52217598-52217617 | MS.gene059032:CDS | 40.0% | |
| GATAGTTTGACTGTCAAGGA+AGG | + | chr1.2:52220885-52220904 | MS.gene059032:intron | 40.0% | |
| GATCTTACTGTTACTCCAGA+CGG | + | chr1.2:52221450-52221469 | MS.gene059032:CDS | 40.0% | |
| GATGTTAGGGTCCATTTACA+AGG | + | chr1.2:52219544-52219563 | MS.gene059032:intron | 40.0% | |
| GCACACAAATTGTGTTGAGT+TGG | - | chr1.2:52221337-52221356 | None:intergenic | 40.0% | |
| GCACATGCAAGCATACATTT+GGG | + | chr1.2:52221274-52221293 | MS.gene059032:CDS | 40.0% | |
| GCCAAACTATCTCAATCTAG+TGG | + | chr1.2:52220963-52220982 | MS.gene059032:intron | 40.0% | |
| GCTGCTGAGCTATTAAAAGT+CGG | + | chr1.2:52219214-52219233 | MS.gene059032:intron | 40.0% | |
| GGGAACGTTATAGGATGTTA+GGG | + | chr1.2:52219531-52219550 | MS.gene059032:intron | 40.0% | |
| GTTTCCTTAACTAATTCCCC+TGG | - | chr1.2:52219699-52219718 | None:intergenic | 40.0% | |
| TATCTTGTCTGGAAGTTCCT+TGG | + | chr1.2:52219460-52219479 | MS.gene059032:intron | 40.0% | |
| TCAAGGATGGAAATAGAAGC+AGG | + | chr1.2:52220045-52220064 | MS.gene059032:intron | 40.0% | |
| TGACGAAAAAATACAGCGTG+TGG | - | chr1.2:52221822-52221841 | None:intergenic | 40.0% | |
| TGACTGTAGCAAAGATGGTT+GGG | - | chr1.2:52220305-52220324 | None:intergenic | 40.0% | |
| TGATCCTCATAAAGCGAAAC+AGG | - | chr1.2:52217605-52217624 | None:intergenic | 40.0% | |
| TGATGGGGATGGTGATTTAA+GGG | + | chr1.2:52217448-52217467 | MS.gene059032:CDS | 40.0% | |
| TGCCCAGATAAAACCTCTAT+TGG | - | chr1.2:52221909-52221928 | None:intergenic | 40.0% | |
| TGCTGAGCTATTAAAAGTCG+GGG | + | chr1.2:52219216-52219235 | MS.gene059032:intron | 40.0% | |
| TGGGAACGTTATAGGATGTT+AGG | + | chr1.2:52219530-52219549 | MS.gene059032:intron | 40.0% | |
| TGTCAGAGAATAGATCTCAC+CGG | - | chr1.2:52220248-52220267 | None:intergenic | 40.0% | |
| TGTGAAGCTAATCCTCACAA+AGG | - | chr1.2:52218236-52218255 | None:intergenic | 40.0% | |
| TTATGCTCCAAGCTCAAATG+TGG | + | chr1.2:52221046-52221065 | MS.gene059032:intron | 40.0% | |
| TTCACCGAGAATTTCAGTGA+TGG | - | chr1.2:52217261-52217280 | None:intergenic | 40.0% | |
| TTCCTTAACTAATTCCCCTG+GGG | - | chr1.2:52219697-52219716 | None:intergenic | 40.0% | |
| TTGGAGCTCATTATCTTGTC+TGG | + | chr1.2:52219449-52219468 | MS.gene059032:intron | 40.0% | |
| TTTAAGGGGGAAGTTGTTGA+TGG | + | chr1.2:52217463-52217482 | MS.gene059032:CDS | 40.0% | |
| ! | ATGATGGGGATGGTGATTTA+AGG | + | chr1.2:52217447-52217466 | MS.gene059032:CDS | 40.0% |
| ! | CCCTCTAAGGAATTATGAGT+TGG | - | chr1.2:52219659-52219678 | None:intergenic | 40.0% |
| ! | GCTAACATTTGTGGCCTTTT+AGG | - | chr1.2:52221963-52221982 | None:intergenic | 40.0% |
| ! | GTGTGAGTTGGAATCCTAAA+AGG | + | chr1.2:52221946-52221965 | MS.gene059032:CDS | 40.0% |
| ! | GTTATGGAGTATTTGAAGCG+TGG | + | chr1.2:52217320-52217339 | MS.gene059032:CDS | 40.0% |
| ! | TAGTGATGGGAAAGTCTTTC+AGG | + | chr1.2:52219162-52219181 | MS.gene059032:intron | 40.0% |
| ! | TCAACGTGCTGTATCTTTTG+TGG | + | chr1.2:52221176-52221195 | MS.gene059032:CDS | 40.0% |
| ! | TGGATGTCTCTTGTTTGGTT+AGG | + | chr1.2:52219495-52219514 | MS.gene059032:intron | 40.0% |
| !! | AAGCTTTAAGCCTGTCACAA+TGG | - | chr1.2:52220399-52220418 | None:intergenic | 40.0% |
| !! | ACATTTTAGGAGACTTGTCC+TGG | + | chr1.2:52219322-52219341 | MS.gene059032:intron | 40.0% |
| !! | AGCTTTAAGCCTGTCACAAT+GGG | - | chr1.2:52220398-52220417 | None:intergenic | 40.0% |
| !! | CATTTTAGGAGACTTGTCCT+GGG | + | chr1.2:52219323-52219342 | MS.gene059032:intron | 40.0% |
| !! | GCTTAGTAAGCTTTAGCTTG+AGG | + | chr1.2:52220415-52220434 | MS.gene059032:intron | 40.0% |
| !! | GTTTAGCTTTGGATGTGTTG+AGG | + | chr1.2:52217351-52217370 | MS.gene059032:CDS | 40.0% |
| !!! | ACATGGAAGTTTTGAAGCTG+TGG | + | chr1.2:52221238-52221257 | MS.gene059032:CDS | 40.0% |
| !!! | CATGGAAGTTTTGAAGCTGT+GGG | + | chr1.2:52221239-52221258 | MS.gene059032:CDS | 40.0% |
| !!! | GAATTGTGGCATGCTGTTTT+AGG | + | chr1.2:52217729-52217748 | MS.gene059032:intron | 40.0% |
| AAGAAGCCACTGAGGTATAC+TGG | + | chr1.2:52221657-52221676 | MS.gene059032:CDS | 45.0% | |
| AAGCTGTGGGATGTTGAAAC+TGG | + | chr1.2:52221252-52221271 | MS.gene059032:CDS | 45.0% | |
| ACACCAAGTTGCTCACTTGT+GGG | + | chr1.2:52221214-52221233 | MS.gene059032:CDS | 45.0% | |
| ACCAGTTGAAAGGGAATGAC+AGG | - | chr1.2:52220107-52220126 | None:intergenic | 45.0% | |
| ACCATCAGCAGAAACCGAAA+TGG | - | chr1.2:52221574-52221593 | None:intergenic | 45.0% | |
| AGAATAGATCTCACCGGAGA+AGG | - | chr1.2:52220242-52220261 | None:intergenic | 45.0% | |
| AGAGGTGACTGTAGCAAAGA+TGG | - | chr1.2:52220310-52220329 | None:intergenic | 45.0% | |
| ATATGCGATGATTGTTGGCC+TGG | + | chr1.2:52219996-52220015 | MS.gene059032:intron | 45.0% | |
| ATCTGCATGTGGGATTGTGA+TGG | + | chr1.2:52221381-52221400 | MS.gene059032:CDS | 45.0% | |
| ATCTTTGCTACAGTCACCTC+TGG | + | chr1.2:52220309-52220328 | MS.gene059032:intron | 45.0% | |
| ATGGGGATGGTGATTTAAGG+GGG | + | chr1.2:52217450-52217469 | MS.gene059032:CDS | 45.0% | |
| CAGTGGCAGTGAAAATTCAG+AGG | + | chr1.2:52221743-52221762 | MS.gene059032:CDS | 45.0% | |
| CATGACAGGTGCAAGAAGAT+GGG | + | chr1.2:52221121-52221140 | MS.gene059032:intron | 45.0% | |
| CATTGAAACACACACTCAGC+GGG | + | chr1.2:52221151-52221170 | MS.gene059032:CDS | 45.0% | |
| CATTGTCAATCTGAACAGCC+AGG | + | chr1.2:52221602-52221621 | MS.gene059032:CDS | 45.0% | |
| CCAGTTGAAAGGGAATGACA+GGG | - | chr1.2:52220106-52220125 | None:intergenic | 45.0% | |
| CTGATTAGATACTCTCCGTC+TGG | - | chr1.2:52221468-52221487 | None:intergenic | 45.0% | |
| GATGGGGATGGTGATTTAAG+GGG | + | chr1.2:52217449-52217468 | MS.gene059032:CDS | 45.0% | |
| GCACCCTATCACATCCATTT+CGG | + | chr1.2:52221557-52221576 | MS.gene059032:CDS | 45.0% | |
| GGCACATGCAAGCATACATT+TGG | + | chr1.2:52221273-52221292 | MS.gene059032:CDS | 45.0% | |
| GTAGTGAACCTCCAGTAACT+AGG | - | chr1.2:52219862-52219881 | None:intergenic | 45.0% | |
| GTGACTGTAGCAAAGATGGT+TGG | - | chr1.2:52220306-52220325 | None:intergenic | 45.0% | |
| GTTTCCTACTACAACCACTC+AGG | + | chr1.2:52217643-52217662 | MS.gene059032:CDS | 45.0% | |
| TACTACAACCACTCAGGTGT+GGG | + | chr1.2:52217649-52217668 | MS.gene059032:intron | 45.0% | |
| TATATGGGGACCCAGCTTAT+AGG | + | chr1.2:52222010-52222029 | MS.gene059032:CDS | 45.0% | |
| TCACTACAACCTGTAGTGCA+TGG | + | chr1.2:52219001-52219020 | MS.gene059032:intron | 45.0% | |
| TCATGACAGGTGCAAGAAGA+TGG | + | chr1.2:52221120-52221139 | MS.gene059032:intron | 45.0% | |
| TCCATTTCGGTTTCTGCTGA+TGG | + | chr1.2:52221570-52221589 | MS.gene059032:CDS | 45.0% | |
| TCGGAGTTCAAAGCCAATAG+AGG | + | chr1.2:52221893-52221912 | MS.gene059032:CDS | 45.0% | |
| TGAAATGACTCGTTCCGCAT+TGG | - | chr1.2:52221532-52221551 | None:intergenic | 45.0% | |
| TGGCAGCCAATCTCAAGATT+TGG | + | chr1.2:52220016-52220035 | MS.gene059032:intron | 45.0% | |
| TTGTAATGAGGACTCTGGCA+AGG | - | chr1.2:52219891-52219910 | None:intergenic | 45.0% | |
| TTGTGACCAGTATACCTCAG+TGG | - | chr1.2:52221666-52221685 | None:intergenic | 45.0% | |
| TTTAAGCCTGTCACAATGGG+AGG | - | chr1.2:52220395-52220414 | None:intergenic | 45.0% | |
| TTTCCTTAACTAGTGCCCCA+GGG | + | chr1.2:52219807-52219826 | MS.gene059032:intron | 45.0% | |
| ! | AAATCTTGAGATTGGCTGCC+AGG | - | chr1.2:52220017-52220036 | None:intergenic | 45.0% |
| ! | AACGAACTAAGAGCATGGAG+AGG | + | chr1.2:52221405-52221424 | MS.gene059032:CDS | 45.0% |
| ! | ACATGCAGATGCCCTTTTCA+GGG | - | chr1.2:52221371-52221390 | None:intergenic | 45.0% |
| ! | CCATCCGGTATTGAAATCGA+CGG | - | chr1.2:52217509-52217528 | None:intergenic | 45.0% |
| ! | CTCTGAATTTTCACTGCCAC+TGG | - | chr1.2:52221745-52221764 | None:intergenic | 45.0% |
| ! | GTGCTGTATCTTTTGTGGCA+TGG | + | chr1.2:52221181-52221200 | MS.gene059032:CDS | 45.0% |
| ! | TAAGAGCATGGAGAGGAATG+AGG | + | chr1.2:52221412-52221431 | MS.gene059032:CDS | 45.0% |
| ! | TATTTGAAGCGTGGTGAGGA+TGG | + | chr1.2:52217329-52217348 | MS.gene059032:CDS | 45.0% |
| ! | TGGTGAGGATGGTTTAGCTT+TGG | + | chr1.2:52217340-52217359 | MS.gene059032:CDS | 45.0% |
| !! | CATTCACCTTTGGAATCCTC+CGG | + | chr1.2:52220275-52220294 | MS.gene059032:intron | 45.0% |
| !! | CGTCGATTTCAATACCGGAT+GGG | + | chr1.2:52217507-52217526 | MS.gene059032:CDS | 45.0% |
| !! | GGCAGTTTTGACCCTGAAAA+GGG | + | chr1.2:52221357-52221376 | MS.gene059032:CDS | 45.0% |
| !! | GGGGAAGTTGTTGATGGATT+TGG | + | chr1.2:52217469-52217488 | MS.gene059032:CDS | 45.0% |
| !! | GTGATTAGGTCCTGTTTTGG+TGG | + | chr1.2:52221699-52221718 | MS.gene059032:CDS | 45.0% |
| !! | TCTGTATGTTTTGTCGGCTG+AGG | + | chr1.2:52218147-52218166 | MS.gene059032:intron | 45.0% |
| !! | TGAAAAGGGCATCTGCATGT+GGG | + | chr1.2:52221371-52221390 | MS.gene059032:CDS | 45.0% |
| !! | TTGTGTTGAGTTGGGAAACC+AGG | - | chr1.2:52221328-52221347 | None:intergenic | 45.0% |
| !! | ATAAAATTATATAAATTGAT+TGG | - | chr1.2:52218077-52218096 | None:intergenic | 5.0% |
| AAATAGTCCCCACACCTGAG+TGG | - | chr1.2:52217660-52217679 | None:intergenic | 50.0% | |
| AAATGCTAACAAGGGGACCC+TGG | - | chr1.2:52219827-52219846 | None:intergenic | 50.0% | |
| AAATGCTCCAACCTCCCATC+CGG | - | chr1.2:52217524-52217543 | None:intergenic | 50.0% | |
| AATGCTAACAAGGGGACCCT+GGG | - | chr1.2:52219826-52219845 | None:intergenic | 50.0% | |
| ACAGCCAGGAGATCCATATG+TGG | + | chr1.2:52221616-52221635 | MS.gene059032:CDS | 50.0% | |
| ACTACAACCACTCAGGTGTG+GGG | + | chr1.2:52217650-52217669 | MS.gene059032:intron | 50.0% | |
| ACTGGTCAAATGTACTGCCC+TGG | + | chr1.2:52220121-52220140 | MS.gene059032:intron | 50.0% | |
| AGTGAACTCACGTAGCAGGA+TGG | - | chr1.2:52220149-52220168 | None:intergenic | 50.0% | |
| ATCCATATGTGGGACGTAGC+CGG | + | chr1.2:52221627-52221646 | MS.gene059032:CDS | 50.0% | |
| CAACAAATATCGCCAGTCCC+AGG | - | chr1.2:52219343-52219362 | None:intergenic | 50.0% | |
| CACACCTGAGTGGTTGTAGT+AGG | - | chr1.2:52217650-52217669 | None:intergenic | 50.0% | |
| CAGCCAGGAGATCCATATGT+GGG | + | chr1.2:52221617-52221636 | MS.gene059032:CDS | 50.0% | |
| CAGTGGCTTCTTCCATGTAC+CGG | - | chr1.2:52221649-52221668 | None:intergenic | 50.0% | |
| CCAGTCAATATCTGCAGCGA+TGG | - | chr1.2:52218714-52218733 | None:intergenic | 50.0% | |
| CCATCGCTGCAGATATTGAC+TGG | + | chr1.2:52218711-52218730 | MS.gene059032:intron | 50.0% | |
| CCCTGTCATTCCCTTTCAAC+TGG | + | chr1.2:52220103-52220122 | MS.gene059032:intron | 50.0% | |
| CGATTTCAATACCGGATGGG+AGG | + | chr1.2:52217510-52217529 | MS.gene059032:CDS | 50.0% | |
| CTACTACAACCACTCAGGTG+TGG | + | chr1.2:52217648-52217667 | MS.gene059032:intron | 50.0% | |
| GAAAGTTGTAGCACAGCCAG+AGG | - | chr1.2:52220328-52220347 | None:intergenic | 50.0% | |
| GACACCAAGTTGCTCACTTG+TGG | + | chr1.2:52221213-52221232 | MS.gene059032:CDS | 50.0% | |
| GTACATCCTCCCATTGTGAC+AGG | + | chr1.2:52220386-52220405 | MS.gene059032:intron | 50.0% | |
| GTACATGGAAGAAGCCACTG+AGG | + | chr1.2:52221649-52221668 | MS.gene059032:CDS | 50.0% | |
| GTTCCCACAAGTGAGCAACT+TGG | - | chr1.2:52221220-52221239 | None:intergenic | 50.0% | |
| GTTGCTCACTTGTGGGAACA+TGG | + | chr1.2:52221221-52221240 | MS.gene059032:CDS | 50.0% | |
| GTTTCCTTAACTAGTGCCCC+AGG | + | chr1.2:52219806-52219825 | MS.gene059032:intron | 50.0% | |
| TGCCCCAGGGGAATTAGTTA+AGG | + | chr1.2:52219692-52219711 | MS.gene059032:intron | 50.0% | |
| TGCGGAACGAGTCATTTCAG+AGG | + | chr1.2:52221533-52221552 | MS.gene059032:CDS | 50.0% | |
| TTAGTTAGCACGCCCCTCTA+AGG | - | chr1.2:52219672-52219691 | None:intergenic | 50.0% | |
| TTCAATACCGGATGGGAGGT+TGG | + | chr1.2:52217514-52217533 | MS.gene059032:CDS | 50.0% | |
| TTGTTGTCAGCTCATGTGCC+TGG | + | chr1.2:52221307-52221326 | MS.gene059032:CDS | 50.0% | |
| TTTCTGCGTTGCGTGTGGAT+CGG | + | chr1.2:52217381-52217400 | MS.gene059032:CDS | 50.0% | |
| ! | CACATGCAGATGCCCTTTTC+AGG | - | chr1.2:52221372-52221391 | None:intergenic | 50.0% |
| ! | GGAGTATTTGAAGCGTGGTG+AGG | + | chr1.2:52217325-52217344 | MS.gene059032:CDS | 50.0% |
| ! | GTTGCGTGTGGATCGGTTTA+AGG | + | chr1.2:52217388-52217407 | MS.gene059032:CDS | 50.0% |
| ! | TCCGGTATTGAAATCGACGG+AGG | - | chr1.2:52217506-52217525 | None:intergenic | 50.0% |
| !! | CCGTCGATTTCAATACCGGA+TGG | + | chr1.2:52217506-52217525 | MS.gene059032:CDS | 50.0% |
| !! | CGGCAGTTTTGACCCTGAAA+AGG | + | chr1.2:52221356-52221375 | MS.gene059032:CDS | 50.0% |
| !! | CTGAAAAGGGCATCTGCATG+TGG | + | chr1.2:52221370-52221389 | MS.gene059032:CDS | 50.0% |
| !! | GCCTCCGTCGATTTCAATAC+CGG | + | chr1.2:52217502-52217521 | MS.gene059032:CDS | 50.0% |
| !! | GTGAGCAACTTGGTGTCATC+AGG | - | chr1.2:52221210-52221229 | None:intergenic | 50.0% |
| ATGCTAACAAGGGGACCCTG+GGG | - | chr1.2:52219825-52219844 | None:intergenic | 55.0% | |
| CACGTAGCAGGATGGAACCA+GGG | - | chr1.2:52220141-52220160 | None:intergenic | 55.0% | |
| CGTCCCACATATGGATCTCC+TGG | - | chr1.2:52221623-52221642 | None:intergenic | 55.0% | |
| CGTGCTAACTAATGCCCCAG+GGG | + | chr1.2:52219680-52219699 | MS.gene059032:intron | 55.0% | |
| GCACAGTGAACTCACGTAGC+AGG | - | chr1.2:52220153-52220172 | None:intergenic | 55.0% | |
| GCGTGCTAACTAATGCCCCA+GGG | + | chr1.2:52219679-52219698 | MS.gene059032:intron | 55.0% | |
| TAGGAGACTTGTCCTGGGAC+TGG | + | chr1.2:52219328-52219347 | MS.gene059032:intron | 55.0% | |
| TCACGTAGCAGGATGGAACC+AGG | - | chr1.2:52220142-52220161 | None:intergenic | 55.0% | |
| ! | AATGGGGGTGTAGCTGCAGA+TGG | - | chr1.2:52220350-52220369 | None:intergenic | 55.0% |
| ! | GGATGGGAGGTTGGAGCATT+TGG | + | chr1.2:52217523-52217542 | MS.gene059032:CDS | 55.0% |
| ! | TACCGGCTACGTCCCACATA+TGG | - | chr1.2:52221632-52221651 | None:intergenic | 55.0% |
| ACGCGTTTCTGCGTTGCGTG+TGG | + | chr1.2:52217376-52217395 | MS.gene059032:CDS | 60.0% | |
| GCAAAGATGGTTGGGCTCGC+CGG | - | chr1.2:52220297-52220316 | None:intergenic | 60.0% | |
| GGCGTGCTAACTAATGCCCC+AGG | + | chr1.2:52219678-52219697 | MS.gene059032:intron | 60.0% | |
| TGTGGGACGTAGCCGGTACA+TGG | + | chr1.2:52221634-52221653 | MS.gene059032:CDS | 60.0% | |
| ! | GGACCCTGGGGCACTAGTTA+AGG | - | chr1.2:52219813-52219832 | None:intergenic | 60.0% |
| AAGATGGTTGGGCTCGCCGG+AGG | - | chr1.2:52220294-52220313 | None:intergenic | 65.0% | |
| GGCTCGCCGGAGGATTCCAA+AGG | - | chr1.2:52220284-52220303 | None:intergenic | 65.0% | |
| TCGACCACACGCGCCTTCTC+CGG | + | chr1.2:52220226-52220245 | MS.gene059032:intron | 65.0% | |
| ! | CTCACCGGAGAAGGCGCGTG+TGG | - | chr1.2:52220233-52220252 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 52217035 | 52222031 | 52217035 | ID=MS.gene059032 |
| chr1.2 | mRNA | 52217035 | 52222031 | 52217035 | ID=MS.gene059032.t1;Parent=MS.gene059032 |
| chr1.2 | exon | 52217035 | 52217664 | 52217035 | ID=MS.gene059032.t1.exon1;Parent=MS.gene059032.t1 |
| chr1.2 | CDS | 52217035 | 52217664 | 52217035 | ID=cds.MS.gene059032.t1;Parent=MS.gene059032.t1 |
| chr1.2 | exon | 52218723 | 52218824 | 52218723 | ID=MS.gene059032.t1.exon2;Parent=MS.gene059032.t1 |
| chr1.2 | CDS | 52218723 | 52218824 | 52218723 | ID=cds.MS.gene059032.t1;Parent=MS.gene059032.t1 |
| chr1.2 | exon | 52221129 | 52221764 | 52221129 | ID=MS.gene059032.t1.exon3;Parent=MS.gene059032.t1 |
| chr1.2 | CDS | 52221129 | 52221764 | 52221129 | ID=cds.MS.gene059032.t1;Parent=MS.gene059032.t1 |
| chr1.2 | exon | 52221876 | 52222031 | 52221876 | ID=MS.gene059032.t1.exon4;Parent=MS.gene059032.t1 |
| chr1.2 | CDS | 52221876 | 52222031 | 52221876 | ID=cds.MS.gene059032.t1;Parent=MS.gene059032.t1 |
| Gene Sequence |
| Protein sequence |