AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034074

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034074.t1 MTR_4g010650 98.886 808 9 0 1 808 1 808 0.0 1666
MS.gene034074.t1 MTR_2g103730 85.290 809 118 1 1 808 1 809 0.0 1454
MS.gene034074.t1 MTR_3g107360 64.286 826 264 10 6 808 5 822 0.0 1082
MS.gene034074.t1 MTR_3g107320 63.101 832 268 10 6 808 5 826 0.0 1065
MS.gene034074.t1 MTR_7g075910 46.303 825 389 17 6 796 299 1103 0.0 726
MS.gene034074.t1 MTR_8g033080 47.296 795 381 15 26 796 258 1038 0.0 721
MS.gene034074.t1 MTR_5g011050 47.464 769 367 14 50 796 90 843 0.0 717
MS.gene034074.t1 MTR_5g011060 45.299 819 401 17 6 796 38 837 0.0 710
MS.gene034074.t1 MTR_8g088690 47.722 790 363 16 50 808 72 842 0.0 707
MS.gene034074.t1 MTR_5g023050 45.963 805 371 14 50 808 86 872 0.0 706
MS.gene034074.t1 MTR_3g114840 46.926 797 367 19 50 808 73 851 0.0 695
MS.gene034074.t1 MTR_2g100250 42.222 810 403 19 6 808 5 756 0.0 613
MS.gene034074.t1 MTR_3g114840 45.924 736 334 19 50 738 73 791 0.0 603
MS.gene034074.t1 MTR_8g016160 40.814 811 399 21 6 808 8 745 0.0 571
MS.gene034074.t1 MTR_8g033080 46.564 582 280 11 26 589 258 826 6.82e-170 512
MS.gene034074.t1 MTR_1g083620 32.636 239 124 10 497 725 477 688 3.86e-21 99.4
MS.gene034074.t1 MTR_1g083620 28.270 237 110 9 211 426 127 324 1.16e-15 82.0
MS.gene034074.t1 MTR_1g083620 32.636 239 124 10 497 725 737 948 5.40e-21 99.4
MS.gene034074.t1 MTR_1g083620 28.692 237 109 10 211 426 387 584 7.86e-16 82.8
MS.gene034074.t1 MTR_5g023040 54.930 71 29 1 324 394 806 873 1.05e-18 91.7
MS.gene034074.t1 MTR_2g435560 30.924 249 132 9 456 692 600 820 2.40e-18 90.9
MS.gene034074.t1 MTR_2g435560 27.155 232 119 8 211 426 253 450 3.25e-15 80.5
MS.gene034074.t1 MTR_2g435560 30.924 249 132 9 456 692 735 955 3.51e-18 90.5
MS.gene034074.t1 MTR_2g435560 27.155 232 119 8 211 426 388 585 2.98e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034074.t1 AT3G15730 81.605 810 147 2 1 808 1 810 0.0 1419
MS.gene034074.t1 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MS.gene034074.t1 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MS.gene034074.t1 AT1G52570 81.235 810 150 2 1 808 1 810 0.0 1410
MS.gene034074.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene034074.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene034074.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1035
MS.gene034074.t1 AT5G25370 64.334 743 257 6 72 808 5 745 0.0 1001
MS.gene034074.t1 AT2G42010 45.388 824 395 17 6 796 271 1072 0.0 727
MS.gene034074.t1 AT2G42010 44.326 846 397 17 6 796 271 1097 0.0 721
MS.gene034074.t1 AT4G11830 44.928 828 403 15 6 796 34 845 0.0 715
MS.gene034074.t1 AT4G11840 45.157 826 404 15 6 796 44 855 0.0 715
MS.gene034074.t1 AT4G00240 46.415 767 378 13 50 796 11 764 0.0 714
MS.gene034074.t1 AT4G00240 46.415 767 378 13 50 796 128 881 0.0 713
MS.gene034074.t1 AT4G00240 45.386 791 394 14 26 796 144 916 0.0 713
MS.gene034074.t1 AT4G11830 46.323 775 372 13 50 796 55 813 0.0 713
MS.gene034074.t1 AT4G11850 45.200 823 404 16 6 796 40 847 0.0 703
MS.gene034074.t1 AT4G11840 44.606 825 380 15 6 796 44 825 0.0 694
MS.gene034074.t1 AT4G35790 46.366 798 369 17 50 808 80 857 0.0 676
MS.gene034074.t1 AT4G35790 45.983 809 367 18 50 808 80 868 0.0 669
MS.gene034074.t1 AT1G55180 40.678 767 402 17 50 808 19 740 0.0 586
MS.gene034074.t1 AT1G55180 39.286 812 427 18 5 808 9 762 0.0 585
MS.gene034074.t1 AT4G35790 46.078 612 283 12 50 626 80 679 3.90e-173 515
MS.gene034074.t1 AT4G11830 43.669 616 307 11 6 596 34 634 2.21e-169 504
MS.gene034074.t1 AT4G11830 43.907 599 296 11 6 579 34 617 6.89e-165 492
MS.gene034074.t1 AT3G05630 30.932 236 126 8 499 724 714 922 3.31e-20 97.1
MS.gene034074.t1 AT3G05630 27.469 324 152 13 131 426 304 572 1.94e-15 81.6
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.50e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.26e-15 82.0
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.50e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.26e-15 82.0
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.51e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.14e-15 82.0
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.51e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.14e-15 82.0
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.85e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.27e-15 82.0
MS.gene034074.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.93e-19 93.6
MS.gene034074.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.23e-15 82.0

Find 229 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGGTGGGTGGAAATTT+TGG 0.132980 4.4:+88856622 MS.gene034074:CDS
GCTTGAACCGATGCACTTTC+TGG 0.142366 4.4:-88857988 None:intergenic
ATTGATGGTGGGGCTGCTTT+TGG 0.174765 4.4:+88857661 MS.gene034074:CDS
GCAGCATCTTCAGGAGTTTC+TGG 0.186898 4.4:-88857688 None:intergenic
ATCGGTTGGTTTGTTGAAAA+AGG 0.188851 4.4:+88857087 MS.gene034074:CDS
CGTTCTTCTGCCTCGGTAAT+CGG 0.218124 4.4:+88858112 MS.gene034074:CDS
TCCATCCCCGGTAACATTTC+CGG 0.219913 4.4:+88857600 MS.gene034074:CDS
ATCCCTAAAATACCACTTTC+TGG 0.238358 4.4:+88856839 MS.gene034074:CDS
TCGCTCCGTCCATTGATCTT+TGG 0.259842 4.4:-88858409 None:intergenic
TTTCTTTGGTGAGGGATTCT+AGG 0.264603 4.4:+88856966 MS.gene034074:CDS
AGGATTTACTTGTCTCTCTA+AGG 0.282625 4.4:+88857554 MS.gene034074:CDS
ACCAGATTGCAGACAAATAT+TGG 0.299587 4.4:+88858600 MS.gene034074:CDS
TGTTTATACCGAAATTTCTT+TGG 0.307662 4.4:+88856952 MS.gene034074:CDS
CCAGCTCTCGCAGCATCTTC+AGG 0.308289 4.4:-88857697 None:intergenic
AAAAGTCTAGTGAAGGTGTT+AGG 0.315711 4.4:+88857035 MS.gene034074:CDS
ACTCTATGCTACCATTGATT+TGG 0.326580 4.4:+88856403 MS.gene034074:CDS
CCCAATATTTGTCTGCAATC+TGG 0.341657 4.4:-88858601 None:intergenic
CTTGAACCGATGCACTTTCT+GGG 0.343605 4.4:-88857987 None:intergenic
ATCCCTCACCAAAGAAATTT+CGG 0.345154 4.4:-88856960 None:intergenic
CCGATTAATGTTGCTCCAAC+AGG 0.346827 4.4:-88856554 None:intergenic
GTGAAAAGACTCGTACCATT+TGG 0.347746 4.4:-88856477 None:intergenic
ATCTTAAGTGAAAGTTCCTT+TGG 0.350014 4.4:-88857895 None:intergenic
TTTCATCAACCTAACTTTCC+AGG 0.354896 4.4:+88857409 MS.gene034074:CDS
ACCACCATCATCAGGATTGC+GGG 0.363530 4.4:-88857185 None:intergenic
TGCATCGGTTCAAGCAATAT+TGG 0.369787 4.4:+88857996 MS.gene034074:CDS
TCACATTTACTGTGCTCATA+TGG 0.370819 4.4:+88856496 MS.gene034074:CDS
GACACCAAGGCTCGAATTCT+CGG 0.375342 4.4:+88858740 MS.gene034074:CDS
TGAAAAGACTCGTACCATTT+GGG 0.379443 4.4:-88856476 None:intergenic
ATGCTTATATTAATGCTATT+CGG 0.380918 4.4:+88857764 MS.gene034074:CDS
TCGTAATCTGAATCAGGTTC+TGG 0.383287 4.4:-88858174 None:intergenic
CCTGTTGGAGCAACATTAAT+CGG 0.386558 4.4:+88856554 MS.gene034074:CDS
TTCTAGGAGGCCAAAGGCTG+GGG 0.387473 4.4:+88856982 MS.gene034074:CDS
GCCTTGAAGGACCGATCGCT+TGG 0.387667 4.4:+88857485 MS.gene034074:CDS
CTGGCTGTCTTGCAGCTAAA+TGG 0.393197 4.4:-88858469 None:intergenic
ATTGAGGAAACTGTTGGTCT+TGG 0.395386 4.4:+88856365 MS.gene034074:CDS
TGTCCACAACCACAATCTTC+TGG 0.398916 4.4:-88857252 None:intergenic
CTGCAATCTGGTTCACCTTA+CGG 0.404374 4.4:-88858589 None:intergenic
GTTCTTCTGCCTCGGTAATC+GGG 0.408625 4.4:+88858113 MS.gene034074:CDS
CAGCATCTTCAGGAGTTTCT+GGG 0.410189 4.4:-88857687 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 4.4:-88857865 None:intergenic
ATTGCAGCACCTGGAAAGTT+AGG 0.413190 4.4:-88857418 None:intergenic
AAACTTACCTATCATCATCT+TGG 0.413744 4.4:-88858238 None:intergenic
TGATGGTGGTAGCATCATTC+AGG 0.414188 4.4:+88857198 MS.gene034074:CDS
AGAATTCGAGCCTTGGTGTC+GGG 0.415144 4.4:-88858737 None:intergenic
CCTGAAGATGCTGCGAGAGC+TGG 0.415758 4.4:+88857697 MS.gene034074:CDS
ATTCAAAGCGCTAAATTTCC+TGG 0.415896 4.4:+88856737 MS.gene034074:CDS
ATGGCACAAATTCATCTTCA+TGG 0.419518 4.4:+88855262 MS.gene034074:CDS
TGATCATCCGGAAATGTTAC+CGG 0.420713 4.4:-88857607 None:intergenic
GGGACACCCTCTGGCCACAT+TGG 0.421738 4.4:-88857967 None:intergenic
GGACACCCTCTGGCCACATT+GGG 0.423065 4.4:-88857966 None:intergenic
TTCCATGTCTCGTGATCATC+CGG 0.424135 4.4:-88857619 None:intergenic
CCAGATTGCAGACAAATATT+GGG 0.424712 4.4:+88858601 MS.gene034074:CDS
ATTGAAAATCAGTATTTCCT+TGG 0.426891 4.4:+88857808 MS.gene034074:CDS
CATGAAACGTCGGGACTGTT+GGG 0.428061 4.4:-88858202 None:intergenic
CAGCTGTTTAGATCTATTGA+TGG 0.430877 4.4:+88857646 MS.gene034074:CDS
GATGTACAAGGATATCGTTC+TGG 0.435578 4.4:+88858044 MS.gene034074:CDS
GTTCATACCAAGATGATGAT+AGG 0.435880 4.4:+88858231 MS.gene034074:CDS
TCTTCGAACCCTCTTGTATC+GGG 0.436117 4.4:-88856658 None:intergenic
CGCTTATCCGACCTTCCACC+AGG 0.436478 4.4:-88857283 None:intergenic
TCACTCGAGCACGACCTTCC+TGG 0.436784 4.4:+88858641 MS.gene034074:CDS
TGAATCAGGTTCTGGTTGTT+CGG 0.437834 4.4:-88858166 None:intergenic
TCCGGAAATGTTACCGGGGA+TGG 0.438701 4.4:-88857601 None:intergenic
AGCTAAATGGTAGGGCTGAT+AGG 0.439308 4.4:-88858456 None:intergenic
TCTTAAGTGAAAGTTCCTTT+GGG 0.441263 4.4:-88857894 None:intergenic
CTCACAGAGGAAAGGATGTA+AGG 0.441756 4.4:+88856778 MS.gene034074:CDS
TGTTTAGATCTATTGATGGT+GGG 0.446034 4.4:+88857650 MS.gene034074:CDS
TCATGAAACGTCGGGACTGT+TGG 0.446105 4.4:-88858203 None:intergenic
CTGTCTTGCAGCTAAATGGT+AGG 0.447434 4.4:-88858465 None:intergenic
GACATTCATTCCCGCCTTGA+AGG 0.449178 4.4:+88857472 MS.gene034074:CDS
ATCTTCGAACCCTCTTGTAT+CGG 0.455754 4.4:-88856659 None:intergenic
AAACACATGATATACATTAC+CGG 0.460467 4.4:+88856923 MS.gene034074:CDS
GCACTTTCTGGGACACCCTC+TGG 0.462871 4.4:-88857976 None:intergenic
AAAGTCTAGTGAAGGTGTTA+GGG 0.463222 4.4:+88857036 MS.gene034074:CDS
GAAACCGCACAGTTCTTTGA+AGG 0.467829 4.4:+88857136 MS.gene034074:CDS
GATTCTAGGAGGCCAAAGGC+TGG 0.467985 4.4:+88856980 MS.gene034074:CDS
TATCCGGCACATGAGAATCT+TGG 0.471426 4.4:-88856811 None:intergenic
GCGAGAGCTGGGCTTATTAG+TGG 0.471776 4.4:+88857709 MS.gene034074:CDS
CACTTGCTTCGCTATCCGAT+TGG 0.472419 4.4:+88858665 MS.gene034074:CDS
TCACCAGAAGATTGTGGTTG+TGG 0.472585 4.4:+88857249 MS.gene034074:CDS
GCTCTCTCGTAATCTGAATC+AGG 0.473696 4.4:-88858180 None:intergenic
AAGCTTAATGCTGGTGGTGG+TGG 0.475675 4.4:+88855316 MS.gene034074:CDS
TTCGGTATAAACAGACCAAC+CGG 0.477585 4.4:-88856942 None:intergenic
AACTAAGTAGTGAGGATAGG+AGG 0.480878 4.4:-88858782 None:intergenic
ATTCTAGGAGGCCAAAGGCT+GGG 0.483116 4.4:+88856981 MS.gene034074:CDS
CTGAAGATGCTGCGAGAGCT+GGG 0.483144 4.4:+88857698 MS.gene034074:CDS
CCTTGAAGGACCGATCGCTT+GGG 0.484290 4.4:+88857486 MS.gene034074:CDS
CTTATCAGCCTCATCGGTGT+TGG 0.485595 4.4:+88856870 MS.gene034074:CDS
TTATCAGCCTCATCGGTGTT+GGG 0.486409 4.4:+88856871 MS.gene034074:CDS
CCCAAGCGATCGGTCCTTCA+AGG 0.490151 4.4:-88857486 None:intergenic
TTACCAAGATTCTCATGTGC+CGG 0.490601 4.4:+88856808 MS.gene034074:CDS
GGAGATGTCACACAGCTGCC+TGG 0.492596 4.4:+88858701 MS.gene034074:CDS
GCCGCCGAGAATTCGAGCCT+TGG 0.492599 4.4:-88858744 None:intergenic
TACCGAAATTTCTTTGGTGA+GGG 0.493877 4.4:+88856958 MS.gene034074:CDS
CCAGGTGCTGCAATCACAAA+AGG 0.496013 4.4:+88857427 MS.gene034074:CDS
CCATTCAAGACCTCCTCGAC+AGG 0.496478 4.4:-88856590 None:intergenic
CATTGATCTTTGGTTGATGT+TGG 0.498653 4.4:-88858399 None:intergenic
AGGATATCGTTCTGGCACTC+AGG 0.498950 4.4:+88858052 MS.gene034074:CDS
TTCTATTATTCCTCCATCCC+CGG 0.504693 4.4:+88857588 MS.gene034074:CDS
TCAGGTTCTGGTTGTTCGGA+AGG 0.504977 4.4:-88858162 None:intergenic
CTGTTTAGATCTATTGATGG+TGG 0.506397 4.4:+88857649 MS.gene034074:CDS
ATTATGAGTAAGATTGAAGC+CGG 0.506694 4.4:+88857916 MS.gene034074:CDS
CAATCACAAAAGGCGGTCCA+AGG 0.512335 4.4:+88857437 MS.gene034074:CDS
CGTTCTGGCACTCAGGGCAA+AGG 0.513948 4.4:+88858059 MS.gene034074:CDS
CCTTCACTAGCAACTCCAAT+CGG 0.513962 4.4:-88858680 None:intergenic
ATGTCACGAAAGACCGCAGT+TGG 0.514050 4.4:+88856705 MS.gene034074:CDS
ATGATGCTACCACCATCATC+AGG 0.514375 4.4:-88857193 None:intergenic
GAAACTGTTGGTCTTGGAAA+GGG 0.514436 4.4:+88856371 MS.gene034074:CDS
GATCATCCGGAAATGTTACC+GGG 0.516686 4.4:-88857606 None:intergenic
TGGTGAGGAAATTGATAGGT+GGG 0.528326 4.4:+88856610 MS.gene034074:CDS
AAGCAATATTGGACTGGCAG+AGG 0.531832 4.4:+88858007 MS.gene034074:CDS
AACATAGATCATGAAACGTC+GGG 0.533395 4.4:-88858211 None:intergenic
ATGTCATGCCAAGGTTCCCT+TGG 0.535392 4.4:-88857454 None:intergenic
AGCGATCGGTCCTTCAAGGC+GGG 0.535565 4.4:-88857482 None:intergenic
GAGAATTCGAGCCTTGGTGT+CGG 0.538506 4.4:-88858738 None:intergenic
TCCAAGCAAAAGAGCTTCCA+AGG 0.539099 4.4:-88857825 None:intergenic
TGATTTGGAGAAGGCGAGAG+TGG 0.539294 4.4:+88856418 MS.gene034074:CDS
CCATGGACTTGACCACGTGC+TGG 0.539957 4.4:-88858488 None:intergenic
TATTTGACGTTCTTCTGCCT+CGG 0.540130 4.4:+88858105 MS.gene034074:CDS
GTTTAGATCTATTGATGGTG+GGG 0.540703 4.4:+88857651 MS.gene034074:CDS
CAAAATATTGCAGCTTCACA+TGG 0.543780 4.4:-88856682 None:intergenic
TCTCGCCTTCTCCAAATCAA+TGG 0.549127 4.4:-88856414 None:intergenic
AAGGCGGTCCAAGGGAACCT+TGG 0.552221 4.4:+88857446 MS.gene034074:CDS
GTGAAAGATGATAATCCTGT+TGG 0.552822 4.4:+88856539 MS.gene034074:CDS
CCAGCACGTGGTCAAGTCCA+TGG 0.552842 4.4:+88858488 MS.gene034074:CDS
TAAGTCTTGCCACCAGAAAG+TGG 0.553280 4.4:-88856851 None:intergenic
ATGAGCATACTAATCCCAAA+TGG 0.553693 4.4:+88856462 MS.gene034074:CDS
GTTCTGGCACTCAGGGCAAA+GGG 0.553846 4.4:+88858060 MS.gene034074:CDS
GGATTTACTTGTCTCTCTAA+GGG 0.554563 4.4:+88857555 MS.gene034074:CDS
CAAAACATTGAGGAAACTGT+TGG 0.557099 4.4:+88856359 MS.gene034074:CDS
GGAAACTGTTGGTCTTGGAA+AGG 0.558000 4.4:+88856370 MS.gene034074:CDS
CCAAACTAAGTAGTGAGGAT+AGG 0.559043 4.4:-88858785 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.560182 4.4:+88858400 MS.gene034074:CDS
TGAATGGTGAGGAAATTGAT+AGG 0.560352 4.4:+88856606 MS.gene034074:CDS
ATACCGAAATTTCTTTGGTG+AGG 0.560671 4.4:+88856957 MS.gene034074:CDS
TTCCGGATGATCACGAGACA+TGG 0.561317 4.4:+88857617 MS.gene034074:CDS
GATATTAAGCCTGAAGACAT+TGG 0.562253 4.4:+88857856 MS.gene034074:CDS
TGCTACCATTGATTTGGAGA+AGG 0.562731 4.4:+88856409 MS.gene034074:CDS
TCTTCATGCTACTATCTATG+AGG 0.563357 4.4:+88855288 MS.gene034074:CDS
GATGACGAATACATAATCGT+TGG 0.564804 4.4:+88858371 MS.gene034074:CDS
AACGATGGAGGAAGCAAGGT+GGG 0.565356 4.4:+88857530 MS.gene034074:CDS
GGATATCGTTCTGGCACTCA+GGG 0.565745 4.4:+88858053 MS.gene034074:CDS
CGGTTCAAGCAATATTGGAC+TGG 0.566255 4.4:+88858001 MS.gene034074:CDS
TTATGAGTAAGATTGAAGCC+GGG 0.567721 4.4:+88857917 MS.gene034074:CDS
AAGTAGTGAGGATAGGAGGG+AGG 0.571376 4.4:-88858778 None:intergenic
TGGGATGATAGAACATCGGT+TGG 0.573109 4.4:+88857073 MS.gene034074:CDS
TGTCTTGCAGCTAAATGGTA+GGG 0.573776 4.4:-88858464 None:intergenic
TACTCATCACCAGAAGATTG+TGG 0.574698 4.4:+88857243 MS.gene034074:CDS
GATAAGCTTAATGCTGGTGG+TGG 0.575966 4.4:+88855313 MS.gene034074:CDS
ACTAAGTAGTGAGGATAGGA+GGG 0.580152 4.4:-88858781 None:intergenic
GGATAGCGAAGCAAGTGTCC+AGG 0.581630 4.4:-88858659 None:intergenic
CCTGTCGAGGAGGTCTTGAA+TGG 0.582151 4.4:+88856590 MS.gene034074:CDS
AGCTGGGCTTATTAGTGGAA+AGG 0.583055 4.4:+88857714 MS.gene034074:CDS
TGCTTTGCATCTCATCCCAA+AGG 0.583132 4.4:+88857879 MS.gene034074:CDS
GAATTCGAGCCTTGGTGTCG+GGG 0.583277 4.4:-88858736 None:intergenic
GCAAGACTTATCAGCCTCAT+CGG 0.586153 4.4:+88856864 MS.gene034074:CDS
TAGGTTGATGAAAATCATCA+TGG 0.587769 4.4:-88857399 None:intergenic
GATTTGGAGAAGGCGAGAGT+GGG 0.588722 4.4:+88856419 MS.gene034074:CDS
ACAGATCAGGCAAAACATTG+AGG 0.589416 4.4:+88856349 MS.gene034074:intron
AAAGATCAATGGACGGAGCG+AGG 0.593749 4.4:+88858411 MS.gene034074:CDS
CCACCATCATCAGGATTGCG+GGG 0.594046 4.4:-88857184 None:intergenic
GAGGGACTCTGAGATAGCGA+TGG 0.594266 4.4:+88858430 MS.gene034074:CDS
AAAGACCGCAGTTGGGCTCG+AGG 0.594612 4.4:+88856713 MS.gene034074:CDS
ATGGAGGAAGCAAGGTGGGA+AGG 0.595810 4.4:+88857534 MS.gene034074:CDS
TACCACCATCATCAGGATTG+CGG 0.597814 4.4:-88857186 None:intergenic
GGAAATGTTACCGGGGATGG+AGG 0.599535 4.4:-88857598 None:intergenic
AGGGACTCTGAGATAGCGAT+GGG 0.600455 4.4:+88858431 MS.gene034074:CDS
GAGGTTGATAAGCTTAATGC+TGG 0.603431 4.4:+88855307 MS.gene034074:CDS
AAATCAAGAATGTATCCGTA+AGG 0.604233 4.4:+88858574 MS.gene034074:CDS
TGTCACGAAAGACCGCAGTT+GGG 0.604750 4.4:+88856706 MS.gene034074:CDS
ACATGATATACATTACCGGT+TGG 0.606826 4.4:+88856927 MS.gene034074:CDS
CCGATTGGAGTTGCTAGTGA+AGG 0.611060 4.4:+88858680 MS.gene034074:CDS
TATGAGTAAGATTGAAGCCG+GGG 0.612358 4.4:+88857918 MS.gene034074:CDS
CTTTGGTGAGGGATTCTAGG+AGG 0.613168 4.4:+88856969 MS.gene034074:CDS
AAGATCAATGGACGGAGCGA+GGG 0.613208 4.4:+88858412 MS.gene034074:CDS
TGTTTAACTTTGAGCAACGA+TGG 0.613445 4.4:+88857515 MS.gene034074:CDS
CGGGAATGAATGTCATGCCA+AGG 0.614171 4.4:-88857463 None:intergenic
AACAACACATCCCAAGCGAT+CGG 0.615121 4.4:-88857496 None:intergenic
AATCACAAAAGGCGGTCCAA+GGG 0.616469 4.4:+88857438 MS.gene034074:CDS
TGGTGGAAATTTCCTCAGCA+TGG 0.616523 4.4:+88855333 MS.gene034074:CDS
GAGCAACGATGGAGGAAGCA+AGG 0.617826 4.4:+88857526 MS.gene034074:CDS
TGGAGAAGGCGAGAGTGGGA+AGG 0.618671 4.4:+88856423 MS.gene034074:CDS
TGAATTACCTGGTGGAAGGT+CGG 0.619368 4.4:+88857276 MS.gene034074:CDS
AGGGAATCGAGGAAGATCCT+CGG 0.622355 4.4:+88858079 MS.gene034074:CDS
TCTAGGAGGCCAAAGGCTGG+GGG 0.624607 4.4:+88856983 MS.gene034074:CDS
AGCATATGTGCCTGTCGAGG+AGG 0.627896 4.4:+88856580 MS.gene034074:CDS
AACAATGGAGATGATGTACA+AGG 0.631124 4.4:+88858032 MS.gene034074:CDS
GAACATAGATCATGAAACGT+CGG 0.633210 4.4:-88858212 None:intergenic
TGTTGTCCCAATGTGGCCAG+AGG 0.634138 4.4:+88857960 MS.gene034074:CDS
GAGGGATTCTAGGAGGCCAA+AGG 0.637811 4.4:+88856976 MS.gene034074:CDS
CTTCTGGTGATGAGTAAACA+TGG 0.641961 4.4:-88857236 None:intergenic
CGAGGAGGTCTTGAATGGTG+AGG 0.642464 4.4:+88856595 MS.gene034074:CDS
GAATGCCTCGAGCCCAACTG+CGG 0.644714 4.4:-88856718 None:intergenic
TGAGGAAATTGATAGGTGGG+TGG 0.645001 4.4:+88856613 MS.gene034074:CDS
GCATTATGGTATGAGCACCT+TGG 0.646788 4.4:+88858521 MS.gene034074:CDS
CACCATCATCAGGATTGCGG+GGG 0.647197 4.4:-88857183 None:intergenic
AGGAGTCATGAAGCATGCCA+AGG 0.651697 4.4:-88858538 None:intergenic
GTTGTCCCAATGTGGCCAGA+GGG 0.653005 4.4:+88857961 MS.gene034074:CDS
AAGAGCATATGTGCCTGTCG+AGG 0.653021 4.4:+88856577 MS.gene034074:CDS
AATCGGGAAGTAAAGAAACA+AGG 0.653307 4.4:+88858129 MS.gene034074:CDS
TATCATATCTTCCATCACAA+AGG 0.653464 4.4:-88857336 None:intergenic
TCAGCCTCATCGGTGTTGGG+AGG 0.653572 4.4:+88856874 MS.gene034074:CDS
ATCAACCAAAGATCAATGGA+CGG 0.654662 4.4:+88858404 MS.gene034074:CDS
AGCGAAGCAAGTGTCCAGGA+AGG 0.657401 4.4:-88858655 None:intergenic
AATAAAACAGTACCATGCTG+AGG 0.661732 4.4:-88855345 None:intergenic
ACAGTGAATTACCTGGTGGA+AGG 0.662406 4.4:+88857272 MS.gene034074:CDS
GGGTGTCCCAGAAAGTGCAT+CGG 0.663109 4.4:+88857981 MS.gene034074:CDS
CAACGATGGAGGAAGCAAGG+TGG 0.668752 4.4:+88857529 MS.gene034074:CDS
AAGAACGTCAAATAATTCCG+AGG 0.670151 4.4:-88858096 None:intergenic
AAGCGATCGGTCCTTCAAGG+CGG 0.671322 4.4:-88857483 None:intergenic
GGTGCTGCAATCACAAAAGG+CGG 0.672665 4.4:+88857430 MS.gene034074:CDS
ACTCAGGGCAAAGGGAATCG+AGG 0.672681 4.4:+88858068 MS.gene034074:CDS
ATGGTGAGGAAATTGATAGG+TGG 0.675988 4.4:+88856609 MS.gene034074:CDS
TCTTTACTTCCCGATTACCG+AGG 0.680953 4.4:-88858122 None:intergenic
ATATCCTCCCAACACCGATG+AGG 0.682280 4.4:-88856878 None:intergenic
TGTTTGGGATGATAGAACAT+CGG 0.683265 4.4:+88857069 MS.gene034074:CDS
TGTACGTTGTTGTCCCAATG+TGG 0.686098 4.4:+88857953 MS.gene034074:CDS
GCTGCAAGACAGCCAGCACG+TGG 0.687862 4.4:+88858476 MS.gene034074:CDS
GTTGATAAGCTTAATGCTGG+TGG 0.689428 4.4:+88855310 MS.gene034074:CDS
ATAATGCCATGCGAAAACCA+TGG 0.691651 4.4:-88858505 None:intergenic
CCTAAAATACCACTTTCTGG+TGG 0.698637 4.4:+88856842 MS.gene034074:CDS
GTTGTGGACAGTGAATTACC+TGG 0.700680 4.4:+88857265 MS.gene034074:CDS
ATCATCCGGAAATGTTACCG+GGG 0.705073 4.4:-88857605 None:intergenic
CCCCGCAATCCTGATGATGG+TGG 0.710398 4.4:+88857184 MS.gene034074:CDS
TTAACTTTGAGCAACGATGG+AGG 0.710551 4.4:+88857518 MS.gene034074:CDS
GGACTGGCAGAGGAGAACAA+TGG 0.727822 4.4:+88858017 MS.gene034074:CDS
ACCAAGGCTCGAATTCTCGG+CGG 0.728696 4.4:+88858743 MS.gene034074:CDS
AGTACCTTCAAAGAACTGTG+CGG 0.748352 4.4:-88857140 None:intergenic
CTGGTGATGAGTAAACATGG+TGG 0.787330 4.4:-88857233 None:intergenic
GTGGACAGTGAATTACCTGG+TGG 0.811877 4.4:+88857268 MS.gene034074:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGAAAAAAAGAATATTT+TGG + chr4.4:88855482-88855501 MS.gene034074:intron 10.0%
!!! ACTGTTTTATTTAATTATTT+TGG + chr4.4:88855357-88855376 MS.gene034074:intron 10.0%
!! ATAAGTATAAGCAAATAAAT+AGG - chr4.4:88856329-88856348 None:intergenic 15.0%
!! ATTACATGTTAATTAAGATT+TGG - chr4.4:88855937-88855956 None:intergenic 15.0%
!! TAAGTATAAGCAAATAAATA+GGG - chr4.4:88856328-88856347 None:intergenic 15.0%
!!! ATTTTTAGTTTTGATGTTTT+TGG + chr4.4:88855409-88855428 MS.gene034074:intron 15.0%
!!! TTTAATTATTTTGGTCTATT+TGG + chr4.4:88855366-88855385 MS.gene034074:intron 15.0%
!! ATGCTTATATTAATGCTATT+CGG + chr4.4:88857764-88857783 MS.gene034074:CDS 20.0%
!!! TAATTTGTTTGATTTAGCTT+TGG - chr4.4:88856205-88856224 None:intergenic 20.0%
!!! TGAAAAAAAGAATATTTTGG+TGG + chr4.4:88855485-88855504 MS.gene034074:intron 20.0%
! AAACACATGATATACATTAC+CGG + chr4.4:88856923-88856942 MS.gene034074:CDS 25.0%
! AATAGGGTCATTAATAATGA+AGG - chr4.4:88856312-88856331 None:intergenic 25.0%
! ATTGAAAATCAGTATTTCCT+TGG + chr4.4:88857808-88857827 MS.gene034074:CDS 25.0%
! GATAAAGTTAATGGTTATTC+AGG - chr4.4:88856037-88856056 None:intergenic 25.0%
! GATGCATAAGATAAAGTTAA+TGG - chr4.4:88856046-88856065 None:intergenic 25.0%
! TGTTTATACATACATTCACA+TGG + chr4.4:88856239-88856258 MS.gene034074:intron 25.0%
! TGTTTATACCGAAATTTCTT+TGG + chr4.4:88856952-88856971 MS.gene034074:CDS 25.0%
!!! AAAAAAGAATATTTTGGTGG+TGG + chr4.4:88855488-88855507 MS.gene034074:intron 25.0%
!!! AAAAAGAATATTTTGGTGGT+GGG + chr4.4:88855489-88855508 MS.gene034074:intron 25.0%
!!! ATTTTAGGGATGAAATTATC+CGG - chr4.4:88856830-88856849 None:intergenic 25.0%
AAACGCAAAACTAAAGAAAC+TGG - chr4.4:88856279-88856298 None:intergenic 30.0%
AAACTTACCTATCATCATCT+TGG - chr4.4:88858241-88858260 None:intergenic 30.0%
AAAGCAAAATCCAATGAGTA+AGG - chr4.4:88856121-88856140 None:intergenic 30.0%
AAATCAAGAATGTATCCGTA+AGG + chr4.4:88858574-88858593 MS.gene034074:CDS 30.0%
ATCTTAAGTGAAAGTTCCTT+TGG - chr4.4:88857898-88857917 None:intergenic 30.0%
ATTATGAGTAAGATTGAAGC+CGG + chr4.4:88857916-88857935 MS.gene034074:CDS 30.0%
CATCTGTTACAAATTAGGTA+TGG - chr4.4:88855794-88855813 None:intergenic 30.0%
CTAAAGAAAAAGTCTAGTGA+AGG + chr4.4:88857028-88857047 MS.gene034074:CDS 30.0%
TACATTGCACATACATACAT+AGG + chr4.4:88856156-88856175 MS.gene034074:intron 30.0%
TATATGAGTGATTGTTGTCA+TGG + chr4.4:88855902-88855921 MS.gene034074:intron 30.0%
TATCATATCTTCCATCACAA+AGG - chr4.4:88857339-88857358 None:intergenic 30.0%
TCTTAAGTGAAAGTTCCTTT+GGG - chr4.4:88857897-88857916 None:intergenic 30.0%
TGCTTATACTTATACAGATC+AGG + chr4.4:88856336-88856355 MS.gene034074:intron 30.0%
! ATTCTTGATTTTCTGGATGA+AGG - chr4.4:88858565-88858584 None:intergenic 30.0%
! CATACCTAATTTGTAACAGA+TGG + chr4.4:88855792-88855811 MS.gene034074:intron 30.0%
! CTCTGTGAGAAAAAAGTATA+CGG - chr4.4:88856767-88856786 None:intergenic 30.0%
! TGTTTAGATCTATTGATGGT+GGG + chr4.4:88857650-88857669 MS.gene034074:CDS 30.0%
! TTGGATTTTGCTTTCGTTAT+TGG + chr4.4:88856127-88856146 MS.gene034074:intron 30.0%
!! TAGGTTGATGAAAATCATCA+TGG - chr4.4:88857402-88857421 None:intergenic 30.0%
!! TGATTTAGCTTTGGTTATTC+AGG - chr4.4:88856196-88856215 None:intergenic 30.0%
!!! AAAAGAATATTTTGGTGGTG+GGG + chr4.4:88855490-88855509 MS.gene034074:intron 30.0%
!!! AAGAATTGTGAGTTTTGTTG+GGG + chr4.4:88857306-88857325 MS.gene034074:CDS 30.0%
!!! GAAGAATTGTGAGTTTTGTT+GGG + chr4.4:88857305-88857324 MS.gene034074:CDS 30.0%
AAAATTTGTGAGATTGCTGC+AGG - chr4.4:88858288-88858307 None:intergenic 35.0%
AACAATGGAGATGATGTACA+AGG + chr4.4:88858032-88858051 MS.gene034074:CDS 35.0%
AACATAGATCATGAAACGTC+GGG - chr4.4:88858214-88858233 None:intergenic 35.0%
AAGAACGTCAAATAATTCCG+AGG - chr4.4:88858099-88858118 None:intergenic 35.0%
AATAAAACAGTACCATGCTG+AGG - chr4.4:88855348-88855367 None:intergenic 35.0%
AATCGGGAAGTAAAGAAACA+AGG + chr4.4:88858129-88858148 MS.gene034074:CDS 35.0%
ACATGATATACATTACCGGT+TGG + chr4.4:88856927-88856946 MS.gene034074:CDS 35.0%
ACCAGATTGCAGACAAATAT+TGG + chr4.4:88858600-88858619 MS.gene034074:CDS 35.0%
AGATCAGTTGAATGAACACA+AGG - chr4.4:88856010-88856029 None:intergenic 35.0%
AGGATTTACTTGTCTCTCTA+AGG + chr4.4:88857554-88857573 MS.gene034074:CDS 35.0%
ATACCGAAATTTCTTTGGTG+AGG + chr4.4:88856957-88856976 MS.gene034074:CDS 35.0%
ATCAACCAAAGATCAATGGA+CGG + chr4.4:88858404-88858423 MS.gene034074:CDS 35.0%
ATCCCTAAAATACCACTTTC+TGG + chr4.4:88856839-88856858 MS.gene034074:CDS 35.0%
ATCCCTCACCAAAGAAATTT+CGG - chr4.4:88856963-88856982 None:intergenic 35.0%
ATGAGCATACTAATCCCAAA+TGG + chr4.4:88856462-88856481 MS.gene034074:CDS 35.0%
ATGGCACAAATTCATCTTCA+TGG + chr4.4:88855262-88855281 MS.gene034074:CDS 35.0%
CAAAACATTGAGGAAACTGT+TGG + chr4.4:88856359-88856378 MS.gene034074:CDS 35.0%
CAAAATATTGCAGCTTCACA+TGG - chr4.4:88856685-88856704 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG + chr4.4:88858400-88858419 MS.gene034074:CDS 35.0%
CAGCTGTTTAGATCTATTGA+TGG + chr4.4:88857646-88857665 MS.gene034074:CDS 35.0%
CCAGATTGCAGACAAATATT+GGG + chr4.4:88858601-88858620 MS.gene034074:CDS 35.0%
CGATTAGTGTTGTCAAATGT+CGG + chr4.4:88855732-88855751 MS.gene034074:intron 35.0%
CTGTTACAAATTAGGTATGG+CGG - chr4.4:88855791-88855810 None:intergenic 35.0%
CTGTTTAGATCTATTGATGG+TGG + chr4.4:88857649-88857668 MS.gene034074:CDS 35.0%
GAAAAAAACCCGATACAAGA+GGG + chr4.4:88856650-88856669 MS.gene034074:CDS 35.0%
GAACATAGATCATGAAACGT+CGG - chr4.4:88858215-88858234 None:intergenic 35.0%
GATATTAAGCCTGAAGACAT+TGG + chr4.4:88857856-88857875 MS.gene034074:CDS 35.0%
GATGACGAATACATAATCGT+TGG + chr4.4:88858371-88858390 MS.gene034074:CDS 35.0%
GATTAGTGTTGTCAAATGTC+GGG + chr4.4:88855733-88855752 MS.gene034074:intron 35.0%
GGATTTACTTGTCTCTCTAA+GGG + chr4.4:88857555-88857574 MS.gene034074:CDS 35.0%
GTGAAAGATGATAATCCTGT+TGG + chr4.4:88856539-88856558 MS.gene034074:CDS 35.0%
GTTCATACCAAGATGATGAT+AGG + chr4.4:88858231-88858250 MS.gene034074:CDS 35.0%
GTTGAAAAAGGATGGTTTGA+TGG + chr4.4:88857099-88857118 MS.gene034074:CDS 35.0%
TACCGAAATTTCTTTGGTGA+GGG + chr4.4:88856958-88856977 MS.gene034074:CDS 35.0%
TCACATTTACTGTGCTCATA+TGG + chr4.4:88856496-88856515 MS.gene034074:CDS 35.0%
TCTTCATGCTACTATCTATG+AGG + chr4.4:88855288-88855307 MS.gene034074:CDS 35.0%
TGAAAAAAACCCGATACAAG+AGG + chr4.4:88856649-88856668 MS.gene034074:CDS 35.0%
TGAAAAGACTCGTACCATTT+GGG - chr4.4:88856479-88856498 None:intergenic 35.0%
TGAATGGTGAGGAAATTGAT+AGG + chr4.4:88856606-88856625 MS.gene034074:CDS 35.0%
TTATGAGTAAGATTGAAGCC+GGG + chr4.4:88857917-88857936 MS.gene034074:CDS 35.0%
TTTCATCAACCTAACTTTCC+AGG + chr4.4:88857409-88857428 MS.gene034074:CDS 35.0%
! AAAAAAGTATACGGAACTCC+AGG - chr4.4:88856758-88856777 None:intergenic 35.0%
! ACCTAATTTGTAACAGATGG+TGG + chr4.4:88855795-88855814 MS.gene034074:intron 35.0%
! ACTCTATGCTACCATTGATT+TGG + chr4.4:88856403-88856422 MS.gene034074:CDS 35.0%
! ATTCAAAGCGCTAAATTTCC+TGG + chr4.4:88856737-88856756 MS.gene034074:CDS 35.0%
! CACCAGAAAGTGGTATTTTA+GGG - chr4.4:88856844-88856863 None:intergenic 35.0%
! CATGTGTTTTGCATTAGTGA+TGG - chr4.4:88856912-88856931 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG - chr4.4:88858402-88858421 None:intergenic 35.0%
! CCTAATTTGTAACAGATGGT+GGG + chr4.4:88855796-88855815 MS.gene034074:intron 35.0%
! CGGATACATTCTTGATTTTC+TGG - chr4.4:88858572-88858591 None:intergenic 35.0%
! CTAATTTGTAACAGATGGTG+GGG + chr4.4:88855797-88855816 MS.gene034074:intron 35.0%
! TGTTTAACTTTGAGCAACGA+TGG + chr4.4:88857515-88857534 MS.gene034074:CDS 35.0%
! TGTTTGGGATGATAGAACAT+CGG + chr4.4:88857069-88857088 MS.gene034074:CDS 35.0%
! TTGATTTTCTGGATGAAGGA+AGG - chr4.4:88858561-88858580 None:intergenic 35.0%
! TTTAAGGTGGCTCAAAATGA+CGG + chr4.4:88855829-88855848 MS.gene034074:intron 35.0%
!! AAAAGTCTAGTGAAGGTGTT+AGG + chr4.4:88857035-88857054 MS.gene034074:CDS 35.0%
!! AAAGTCTAGTGAAGGTGTTA+GGG + chr4.4:88857036-88857055 MS.gene034074:CDS 35.0%
!! ATCGGTTGGTTTGTTGAAAA+AGG + chr4.4:88857087-88857106 MS.gene034074:CDS 35.0%
!! CAAGAGTTCTAAAAAGTGAG+TGG - chr4.4:88857369-88857388 None:intergenic 35.0%
!! CGAAGAATTGTGAGTTTTGT+TGG + chr4.4:88857304-88857323 MS.gene034074:CDS 35.0%
!! GTTCTAAAAAGTGAGTGGAA+TGG - chr4.4:88857364-88857383 None:intergenic 35.0%
!! GTTGGTTTGTTGAAAAAGGA+TGG + chr4.4:88857091-88857110 MS.gene034074:CDS 35.0%
!! GTTTAGATCTATTGATGGTG+GGG + chr4.4:88857651-88857670 MS.gene034074:CDS 35.0%
!! TAGGGTTTTGATGCTTGTTT+GGG + chr4.4:88857054-88857073 MS.gene034074:CDS 35.0%
!! TTAGGGTTTTGATGCTTGTT+TGG + chr4.4:88857053-88857072 MS.gene034074:CDS 35.0%
!!! ACTTTTTTCTCACAGAGGAA+AGG + chr4.4:88856770-88856789 MS.gene034074:CDS 35.0%
!!! AGAATTGTGAGTTTTGTTGG+GGG + chr4.4:88857307-88857326 MS.gene034074:CDS 35.0%
!!! CGTATACTTTTTTCTCACAG+AGG + chr4.4:88856765-88856784 MS.gene034074:CDS 35.0%
ACAGATCAGGCAAAACATTG+AGG + chr4.4:88856349-88856368 MS.gene034074:intron 40.0%
ACAGATCCTAAAAGCAAGCA+GGG - chr4.4:88855538-88855557 None:intergenic 40.0%
AGTACCTTCAAAGAACTGTG+CGG - chr4.4:88857143-88857162 None:intergenic 40.0%
AGTCTCAATCACAGATTCAC+TGG - chr4.4:88855632-88855651 None:intergenic 40.0%
ATAATGCCATGCGAAAACCA+TGG - chr4.4:88858508-88858527 None:intergenic 40.0%
ATCTTCGAACCCTCTTGTAT+CGG - chr4.4:88856662-88856681 None:intergenic 40.0%
ATGGTGAGGAAATTGATAGG+TGG + chr4.4:88856609-88856628 MS.gene034074:CDS 40.0%
CACAAGGTAGTTTCAATCGA+AGG - chr4.4:88855994-88856013 None:intergenic 40.0%
CCCAATATTTGTCTGCAATC+TGG - chr4.4:88858604-88858623 None:intergenic 40.0%
CCCACCATCTGTTACAAATT+AGG - chr4.4:88855799-88855818 None:intergenic 40.0%
CCTAAAATACCACTTTCTGG+TGG + chr4.4:88856842-88856861 MS.gene034074:CDS 40.0%
CCTGTTGGAGCAACATTAAT+CGG + chr4.4:88856554-88856573 MS.gene034074:CDS 40.0%
GATGTACAAGGATATCGTTC+TGG + chr4.4:88858044-88858063 MS.gene034074:CDS 40.0%
GTGAAAAGACTCGTACCATT+TGG - chr4.4:88856480-88856499 None:intergenic 40.0%
TACTCATCACCAGAAGATTG+TGG + chr4.4:88857243-88857262 MS.gene034074:CDS 40.0%
TATGAGTAAGATTGAAGCCG+GGG + chr4.4:88857918-88857937 MS.gene034074:CDS 40.0%
TATTTGACGTTCTTCTGCCT+CGG + chr4.4:88858105-88858124 MS.gene034074:CDS 40.0%
TCGGGGAAAAATTCAAATCC+AGG - chr4.4:88858722-88858741 None:intergenic 40.0%
TCGTAATCTGAATCAGGTTC+TGG - chr4.4:88858177-88858196 None:intergenic 40.0%
TGAGCCACCTTAAAAATCCA+TGG - chr4.4:88855823-88855842 None:intergenic 40.0%
TGATCATCCGGAAATGTTAC+CGG - chr4.4:88857610-88857629 None:intergenic 40.0%
TGGTGAGGAAATTGATAGGT+GGG + chr4.4:88856610-88856629 MS.gene034074:CDS 40.0%
TGTCTTGCAGCTAAATGGTA+GGG - chr4.4:88858467-88858486 None:intergenic 40.0%
TTAACTTTGAGCAACGATGG+AGG + chr4.4:88857518-88857537 MS.gene034074:CDS 40.0%
TTACCAAGATTCTCATGTGC+CGG + chr4.4:88856808-88856827 MS.gene034074:CDS 40.0%
TTCGGTATAAACAGACCAAC+CGG - chr4.4:88856945-88856964 None:intergenic 40.0%
TTCTATTATTCCTCCATCCC+CGG + chr4.4:88857588-88857607 MS.gene034074:CDS 40.0%
TTTCTTTGGTGAGGGATTCT+AGG + chr4.4:88856966-88856985 MS.gene034074:CDS 40.0%
! ATGGTTTTCGCATGGCATTA+TGG + chr4.4:88858507-88858526 MS.gene034074:CDS 40.0%
! ATTGAGGAAACTGTTGGTCT+TGG + chr4.4:88856365-88856384 MS.gene034074:CDS 40.0%
! CCACCAGAAAGTGGTATTTT+AGG - chr4.4:88856845-88856864 None:intergenic 40.0%
! CTTCTGGTGATGAGTAAACA+TGG - chr4.4:88857239-88857258 None:intergenic 40.0%
! GTTGATAAGCTTAATGCTGG+TGG + chr4.4:88855310-88855329 MS.gene034074:CDS 40.0%
! TCAGTGTTATCGATTGCAGA+TGG - chr4.4:88855880-88855899 None:intergenic 40.0%
! TGAATCAGGTTCTGGTTGTT+CGG - chr4.4:88858169-88858188 None:intergenic 40.0%
! TGATAGGTGGGTGGAAATTT+TGG + chr4.4:88856622-88856641 MS.gene034074:CDS 40.0%
!! GAAACTGTTGGTCTTGGAAA+GGG + chr4.4:88856371-88856390 MS.gene034074:CDS 40.0%
!! GAGGTTGATAAGCTTAATGC+TGG + chr4.4:88855307-88855326 MS.gene034074:CDS 40.0%
!! TGCATCGGTTCAAGCAATAT+TGG + chr4.4:88857996-88858015 MS.gene034074:CDS 40.0%
!! TGCTACCATTGATTTGGAGA+AGG + chr4.4:88856409-88856428 MS.gene034074:CDS 40.0%
AACAACACATCCCAAGCGAT+CGG - chr4.4:88857499-88857518 None:intergenic 45.0%
AATCACAAAAGGCGGTCCAA+GGG + chr4.4:88857438-88857457 MS.gene034074:CDS 45.0%
ACAGTGAATTACCTGGTGGA+AGG + chr4.4:88857272-88857291 MS.gene034074:CDS 45.0%
ACCGATCATTTGCATACCCT+TGG + chr4.4:88855708-88855727 MS.gene034074:intron 45.0%
AGCTAAATGGTAGGGCTGAT+AGG - chr4.4:88858459-88858478 None:intergenic 45.0%
AGCTGGGCTTATTAGTGGAA+AGG + chr4.4:88857714-88857733 MS.gene034074:CDS 45.0%
ATCATCCGGAAATGTTACCG+GGG - chr4.4:88857608-88857627 None:intergenic 45.0%
ATGATGCTACCACCATCATC+AGG - chr4.4:88857196-88857215 None:intergenic 45.0%
ATTGCAGCACCTGGAAAGTT+AGG - chr4.4:88857421-88857440 None:intergenic 45.0%
CACAGATCCTAAAAGCAAGC+AGG - chr4.4:88855539-88855558 None:intergenic 45.0%
CAGCATCTTCAGGAGTTTCT+GGG - chr4.4:88857690-88857709 None:intergenic 45.0%
CCGATCATTTGCATACCCTT+GGG + chr4.4:88855709-88855728 MS.gene034074:intron 45.0%
CCGATTAATGTTGCTCCAAC+AGG - chr4.4:88856557-88856576 None:intergenic 45.0%
CCTTCACTAGCAACTCCAAT+CGG - chr4.4:88858683-88858702 None:intergenic 45.0%
CGGTTCAAGCAATATTGGAC+TGG + chr4.4:88858001-88858020 MS.gene034074:CDS 45.0%
CTCACAGAGGAAAGGATGTA+AGG + chr4.4:88856778-88856797 MS.gene034074:CDS 45.0%
CTGTCTTGCAGCTAAATGGT+AGG - chr4.4:88858468-88858487 None:intergenic 45.0%
CTTGAACCGATGCACTTTCT+GGG - chr4.4:88857990-88858009 None:intergenic 45.0%
GAAACCGCACAGTTCTTTGA+AGG + chr4.4:88857136-88857155 MS.gene034074:CDS 45.0%
GATAAGCTTAATGCTGGTGG+TGG + chr4.4:88855313-88855332 MS.gene034074:CDS 45.0%
GATCATCCGGAAATGTTACC+GGG - chr4.4:88857609-88857628 None:intergenic 45.0%
GCAAGACTTATCAGCCTCAT+CGG + chr4.4:88856864-88856883 MS.gene034074:CDS 45.0%
GCATTATGGTATGAGCACCT+TGG + chr4.4:88858521-88858540 MS.gene034074:CDS 45.0%
GCTCTCTCGTAATCTGAATC+AGG - chr4.4:88858183-88858202 None:intergenic 45.0%
GGATCACTGATGCATCAAAG+TGG + chr4.4:88855511-88855530 MS.gene034074:intron 45.0%
GTTGTGGACAGTGAATTACC+TGG + chr4.4:88857265-88857284 MS.gene034074:CDS 45.0%
TAAGTCTTGCCACCAGAAAG+TGG - chr4.4:88856854-88856873 None:intergenic 45.0%
TACCACCATCATCAGGATTG+CGG - chr4.4:88857189-88857208 None:intergenic 45.0%
TATCCGGCACATGAGAATCT+TGG - chr4.4:88856814-88856833 None:intergenic 45.0%
TCACCAGAAGATTGTGGTTG+TGG + chr4.4:88857249-88857268 MS.gene034074:CDS 45.0%
TCCAAGCAAAAGAGCTTCCA+AGG - chr4.4:88857828-88857847 None:intergenic 45.0%
TCTCGCCTTCTCCAAATCAA+TGG - chr4.4:88856417-88856436 None:intergenic 45.0%
TCTTCGAACCCTCTTGTATC+GGG - chr4.4:88856661-88856680 None:intergenic 45.0%
TCTTTACTTCCCGATTACCG+AGG - chr4.4:88858125-88858144 None:intergenic 45.0%
TGAATTACCTGGTGGAAGGT+CGG + chr4.4:88857276-88857295 MS.gene034074:CDS 45.0%
TGACAACACTAATCGCCCAA+GGG - chr4.4:88855727-88855746 None:intergenic 45.0%
TGAGGAAATTGATAGGTGGG+TGG + chr4.4:88856613-88856632 MS.gene034074:CDS 45.0%
TGCTTCAGCACCTTACTCAT+TGG + chr4.4:88856108-88856127 MS.gene034074:intron 45.0%
TGCTTTGCATCTCATCCCAA+AGG + chr4.4:88857879-88857898 MS.gene034074:CDS 45.0%
TGGGATGATAGAACATCGGT+TGG + chr4.4:88857073-88857092 MS.gene034074:CDS 45.0%
TGGTGGAAATTTCCTCAGCA+TGG + chr4.4:88855333-88855352 MS.gene034074:CDS 45.0%
TGTACGTTGTTGTCCCAATG+TGG + chr4.4:88857953-88857972 MS.gene034074:CDS 45.0%
TGTCCACAACCACAATCTTC+TGG - chr4.4:88857255-88857274 None:intergenic 45.0%
TTCCATGTCTCGTGATCATC+CGG - chr4.4:88857622-88857641 None:intergenic 45.0%
TTGACAACACTAATCGCCCA+AGG - chr4.4:88855728-88855747 None:intergenic 45.0%
! CCCAAGGGTATGCAAATGAT+CGG - chr4.4:88855712-88855731 None:intergenic 45.0%
! CTGCAATCTGGTTCACCTTA+CGG - chr4.4:88858592-88858611 None:intergenic 45.0%
! CTGGTGATGAGTAAACATGG+TGG - chr4.4:88857236-88857255 None:intergenic 45.0%
! GTACACAGTGAACTTTTCCC+CGG - chr4.4:88857938-88857957 None:intergenic 45.0%
! GTGTTATCGATTGCAGATGG+CGG - chr4.4:88855877-88855896 None:intergenic 45.0%
! TCAAGTCCATGGTTTTCGCA+TGG + chr4.4:88858499-88858518 MS.gene034074:CDS 45.0%
! TCCTTGGAAGCTCTTTTGCT+TGG + chr4.4:88857824-88857843 MS.gene034074:CDS 45.0%
! TGAATTTTTCCCCGACACCA+AGG + chr4.4:88858727-88858746 MS.gene034074:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG - chr4.4:88857868-88857887 None:intergenic 45.0%
! TTATCAGCCTCATCGGTGTT+GGG + chr4.4:88856871-88856890 MS.gene034074:CDS 45.0%
!! AAGCAATATTGGACTGGCAG+AGG + chr4.4:88858007-88858026 MS.gene034074:CDS 45.0%
!! GGAAACTGTTGGTCTTGGAA+AGG + chr4.4:88856370-88856389 MS.gene034074:CDS 45.0%
!! TGATGGTGGTAGCATCATTC+AGG + chr4.4:88857198-88857217 MS.gene034074:CDS 45.0%
!!! GGACTTTTGGTTTTGCACCA+TGG + chr4.4:88855850-88855869 MS.gene034074:intron 45.0%
!!! GGCTCAAAATGACGGACTTT+TGG + chr4.4:88855837-88855856 MS.gene034074:intron 45.0%
AAAGATCAATGGACGGAGCG+AGG + chr4.4:88858411-88858430 MS.gene034074:CDS 50.0%
AACGATGGAGGAAGCAAGGT+GGG + chr4.4:88857530-88857549 MS.gene034074:CDS 50.0%
AAGATCAATGGACGGAGCGA+GGG + chr4.4:88858412-88858431 MS.gene034074:CDS 50.0%
AAGTAGTGAGGATAGGAGGG+AGG - chr4.4:88858781-88858800 None:intergenic 50.0%
ACCACCATCATCAGGATTGC+GGG - chr4.4:88857188-88857207 None:intergenic 50.0%
AGGAGTCATGAAGCATGCCA+AGG - chr4.4:88858541-88858560 None:intergenic 50.0%
AGGATATCGTTCTGGCACTC+AGG + chr4.4:88858052-88858071 MS.gene034074:CDS 50.0%
AGGGAATCGAGGAAGATCCT+CGG + chr4.4:88858079-88858098 MS.gene034074:CDS 50.0%
ATATCCTCCCAACACCGATG+AGG - chr4.4:88856881-88856900 None:intergenic 50.0%
ATGTCACGAAAGACCGCAGT+TGG + chr4.4:88856705-88856724 MS.gene034074:CDS 50.0%
ATGTCATGCCAAGGTTCCCT+TGG - chr4.4:88857457-88857476 None:intergenic 50.0%
CAATCACAAAAGGCGGTCCA+AGG + chr4.4:88857437-88857456 MS.gene034074:CDS 50.0%
CACTTGCTTCGCTATCCGAT+TGG + chr4.4:88858665-88858684 MS.gene034074:CDS 50.0%
CATGAAACGTCGGGACTGTT+GGG - chr4.4:88858205-88858224 None:intergenic 50.0%
CCGATTGGAGTTGCTAGTGA+AGG + chr4.4:88858680-88858699 MS.gene034074:CDS 50.0%
CGGGAATGAATGTCATGCCA+AGG - chr4.4:88857466-88857485 None:intergenic 50.0%
CGTTCTTCTGCCTCGGTAAT+CGG + chr4.4:88858112-88858131 MS.gene034074:CDS 50.0%
CTGGCTGTCTTGCAGCTAAA+TGG - chr4.4:88858472-88858491 None:intergenic 50.0%
CTTATCAGCCTCATCGGTGT+TGG + chr4.4:88856870-88856889 MS.gene034074:CDS 50.0%
CTTTGGTGAGGGATTCTAGG+AGG + chr4.4:88856969-88856988 MS.gene034074:CDS 50.0%
GACACCAAGGCTCGAATTCT+CGG + chr4.4:88858740-88858759 MS.gene034074:CDS 50.0%
GACATTCATTCCCGCCTTGA+AGG + chr4.4:88857472-88857491 MS.gene034074:CDS 50.0%
GATTTGGAGAAGGCGAGAGT+GGG + chr4.4:88856419-88856438 MS.gene034074:CDS 50.0%
GCAGCATCTTCAGGAGTTTC+TGG - chr4.4:88857691-88857710 None:intergenic 50.0%
GCTTGAACCGATGCACTTTC+TGG - chr4.4:88857991-88858010 None:intergenic 50.0%
GGATATCGTTCTGGCACTCA+GGG + chr4.4:88858053-88858072 MS.gene034074:CDS 50.0%
GGTTGCCAAAAAATCCGCCA+TGG - chr4.4:88855770-88855789 None:intergenic 50.0%
GTGGACAGTGAATTACCTGG+TGG + chr4.4:88857268-88857287 MS.gene034074:CDS 50.0%
GTTCTTCTGCCTCGGTAATC+GGG + chr4.4:88858113-88858132 MS.gene034074:CDS 50.0%
TCATGAAACGTCGGGACTGT+TGG - chr4.4:88858206-88858225 None:intergenic 50.0%
TCCATCCCCGGTAACATTTC+CGG + chr4.4:88857600-88857619 MS.gene034074:CDS 50.0%
TCGCTCCGTCCATTGATCTT+TGG - chr4.4:88858412-88858431 None:intergenic 50.0%
TGTCACGAAAGACCGCAGTT+GGG + chr4.4:88856706-88856725 MS.gene034074:CDS 50.0%
TTCCGGATGATCACGAGACA+TGG + chr4.4:88857617-88857636 MS.gene034074:CDS 50.0%
! AAGAGCATATGTGCCTGTCG+AGG + chr4.4:88856577-88856596 MS.gene034074:CDS 50.0%
! ATTCTAGGAGGCCAAAGGCT+GGG + chr4.4:88856981-88857000 MS.gene034074:CDS 50.0%
! CCAGGTGCTGCAATCACAAA+AGG + chr4.4:88857427-88857446 MS.gene034074:CDS 50.0%
! CCTTTTGTGATTGCAGCACC+TGG - chr4.4:88857430-88857449 None:intergenic 50.0%
! CTCTTTTGCTTGGAGTGGTG+AGG + chr4.4:88857834-88857853 MS.gene034074:CDS 50.0%
! GAGAATTCGAGCCTTGGTGT+CGG - chr4.4:88858741-88858760 None:intergenic 50.0%
! GGAAGCTCTTTTGCTTGGAG+TGG + chr4.4:88857829-88857848 MS.gene034074:CDS 50.0%
! GGTGCTGCAATCACAAAAGG+CGG + chr4.4:88857430-88857449 MS.gene034074:CDS 50.0%
! GGTGGGGCCATGGATTTTTA+AGG + chr4.4:88855813-88855832 MS.gene034074:intron 50.0%
! TCAGGTTCTGGTTGTTCGGA+AGG - chr4.4:88858165-88858184 None:intergenic 50.0%
! TGATTTGGAGAAGGCGAGAG+TGG + chr4.4:88856418-88856437 MS.gene034074:CDS 50.0%
!! AAGCTTAATGCTGGTGGTGG+TGG + chr4.4:88855316-88855335 MS.gene034074:CDS 50.0%
!! AGAATTCGAGCCTTGGTGTC+GGG - chr4.4:88858740-88858759 None:intergenic 50.0%
!! AGGGACTCTGAGATAGCGAT+GGG + chr4.4:88858431-88858450 MS.gene034074:CDS 50.0%
!! AGTGGACCCTGCTTGCTTTT+AGG + chr4.4:88855529-88855548 MS.gene034074:intron 50.0%
!! GGGGCCATGGATTTTTAAGG+TGG + chr4.4:88855816-88855835 MS.gene034074:intron 50.0%
!!! ATTGATGGTGGGGCTGCTTT+TGG + chr4.4:88857661-88857680 MS.gene034074:CDS 50.0%
!!! TTGATGGTGGGGCTGCTTTT+GGG + chr4.4:88857662-88857681 MS.gene034074:CDS 50.0%
AAGCGATCGGTCCTTCAAGG+CGG - chr4.4:88857486-88857505 None:intergenic 55.0%
ACCAAGGCTCGAATTCTCGG+CGG + chr4.4:88858743-88858762 MS.gene034074:CDS 55.0%
ACTCAGGGCAAAGGGAATCG+AGG + chr4.4:88858068-88858087 MS.gene034074:CDS 55.0%
AGCATATGTGCCTGTCGAGG+AGG + chr4.4:88856580-88856599 MS.gene034074:CDS 55.0%
AGCGAAGCAAGTGTCCAGGA+AGG - chr4.4:88858658-88858677 None:intergenic 55.0%
ATGGAGGAAGCAAGGTGGGA+AGG + chr4.4:88857534-88857553 MS.gene034074:CDS 55.0%
CAACGATGGAGGAAGCAAGG+TGG + chr4.4:88857529-88857548 MS.gene034074:CDS 55.0%
CACCATCATCAGGATTGCGG+GGG - chr4.4:88857186-88857205 None:intergenic 55.0%
CCACCATCATCAGGATTGCG+GGG - chr4.4:88857187-88857206 None:intergenic 55.0%
CCATTCAAGACCTCCTCGAC+AGG - chr4.4:88856593-88856612 None:intergenic 55.0%
CCTGTCGAGGAGGTCTTGAA+TGG + chr4.4:88856590-88856609 MS.gene034074:CDS 55.0%
CCTTGAAGGACCGATCGCTT+GGG + chr4.4:88857486-88857505 MS.gene034074:CDS 55.0%
CGAGGAGGTCTTGAATGGTG+AGG + chr4.4:88856595-88856614 MS.gene034074:CDS 55.0%
CTGAAGATGCTGCGAGAGCT+GGG + chr4.4:88857698-88857717 MS.gene034074:CDS 55.0%
GAGCAACGATGGAGGAAGCA+AGG + chr4.4:88857526-88857545 MS.gene034074:CDS 55.0%
GCGAGAGCTGGGCTTATTAG+TGG + chr4.4:88857709-88857728 MS.gene034074:CDS 55.0%
GCTGGGGGAGACACAACAAT+TGG + chr4.4:88856998-88857017 MS.gene034074:CDS 55.0%
GGAAATGTTACCGGGGATGG+AGG - chr4.4:88857601-88857620 None:intergenic 55.0%
GGATAGCGAAGCAAGTGTCC+AGG - chr4.4:88858662-88858681 None:intergenic 55.0%
GTTCTGGCACTCAGGGCAAA+GGG + chr4.4:88858060-88858079 MS.gene034074:CDS 55.0%
GTTGTCCCAATGTGGCCAGA+GGG + chr4.4:88857961-88857980 MS.gene034074:CDS 55.0%
TCCGGAAATGTTACCGGGGA+TGG - chr4.4:88857604-88857623 None:intergenic 55.0%
TGTTGTCCCAATGTGGCCAG+AGG + chr4.4:88857960-88857979 MS.gene034074:CDS 55.0%
! GAGGGATTCTAGGAGGCCAA+AGG + chr4.4:88856976-88856995 MS.gene034074:CDS 55.0%
! GATTCTAGGAGGCCAAAGGC+TGG + chr4.4:88856980-88856999 MS.gene034074:CDS 55.0%
! GGACTGGCAGAGGAGAACAA+TGG + chr4.4:88858017-88858036 MS.gene034074:CDS 55.0%
! GGGTGTCCCAGAAAGTGCAT+CGG + chr4.4:88857981-88858000 MS.gene034074:CDS 55.0%
! TTCTAGGAGGCCAAAGGCTG+GGG + chr4.4:88856982-88857001 MS.gene034074:CDS 55.0%
!! GAATTCGAGCCTTGGTGTCG+GGG - chr4.4:88858739-88858758 None:intergenic 55.0%
!! GAGGGACTCTGAGATAGCGA+TGG + chr4.4:88858430-88858449 MS.gene034074:CDS 55.0%
!! TGTAACAGATGGTGGGGCCA+TGG + chr4.4:88855803-88855822 MS.gene034074:intron 55.0%
!!! CAGCGCCATGGCGGATTTTT+TGG + chr4.4:88855762-88855781 MS.gene034074:intron 55.0%
AAAGACCGCAGTTGGGCTCG+AGG + chr4.4:88856713-88856732 MS.gene034074:CDS 60.0%
AAGGCGGTCCAAGGGAACCT+TGG + chr4.4:88857446-88857465 MS.gene034074:CDS 60.0%
AATCCGCCATGGCGCTGCTA+TGG - chr4.4:88855759-88855778 None:intergenic 60.0%
AGCGATCGGTCCTTCAAGGC+GGG - chr4.4:88857485-88857504 None:intergenic 60.0%
CCAGCACGTGGTCAAGTCCA+TGG + chr4.4:88858488-88858507 MS.gene034074:CDS 60.0%
CCAGCTCTCGCAGCATCTTC+AGG - chr4.4:88857700-88857719 None:intergenic 60.0%
CCATGGACTTGACCACGTGC+TGG - chr4.4:88858491-88858510 None:intergenic 60.0%
CCCAAGCGATCGGTCCTTCA+AGG - chr4.4:88857489-88857508 None:intergenic 60.0%
CCTGAAGATGCTGCGAGAGC+TGG + chr4.4:88857697-88857716 MS.gene034074:CDS 60.0%
CGCTTATCCGACCTTCCACC+AGG - chr4.4:88857286-88857305 None:intergenic 60.0%
CGTTCTGGCACTCAGGGCAA+AGG + chr4.4:88858059-88858078 MS.gene034074:CDS 60.0%
GAATGCCTCGAGCCCAACTG+CGG - chr4.4:88856721-88856740 None:intergenic 60.0%
GCCTTGAAGGACCGATCGCT+TGG + chr4.4:88857485-88857504 MS.gene034074:CDS 60.0%
GGACACCCTCTGGCCACATT+GGG - chr4.4:88857969-88857988 None:intergenic 60.0%
GGAGATGTCACACAGCTGCC+TGG + chr4.4:88858701-88858720 MS.gene034074:CDS 60.0%
GGGGGTCTCGACCTTTGTGA+TGG + chr4.4:88857325-88857344 MS.gene034074:CDS 60.0%
GTTGTGTCTCCCCCAGCCTT+TGG - chr4.4:88856995-88857014 None:intergenic 60.0%
TCACTCGAGCACGACCTTCC+TGG + chr4.4:88858641-88858660 MS.gene034074:CDS 60.0%
TCTAGGAGGCCAAAGGCTGG+GGG + chr4.4:88856983-88857002 MS.gene034074:CDS 60.0%
TGCCCCCGCAATCCTGATGA+TGG + chr4.4:88857181-88857200 MS.gene034074:CDS 60.0%
TGGAGAAGGCGAGAGTGGGA+AGG + chr4.4:88856423-88856442 MS.gene034074:CDS 60.0%
!! CCCCGCAATCCTGATGATGG+TGG + chr4.4:88857184-88857203 MS.gene034074:CDS 60.0%
!! CGATTGCAGATGGCGGACCA+TGG - chr4.4:88855870-88855889 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+TGG - chr4.4:88857979-88857998 None:intergenic 60.0%
!! TCAGCCTCATCGGTGTTGGG+AGG + chr4.4:88856874-88856893 MS.gene034074:CDS 60.0%
GCCGCCGAGAATTCGAGCCT+TGG - chr4.4:88858747-88858766 None:intergenic 65.0%
GCTGCAAGACAGCCAGCACG+TGG + chr4.4:88858476-88858495 MS.gene034074:CDS 65.0%
GGGACACCCTCTGGCCACAT+TGG - chr4.4:88857970-88857989 None:intergenic 65.0%
GGGCCATAGCAGCGCCATGG+CGG + chr4.4:88855753-88855772 MS.gene034074:intron 70.0%
GTCGGGCCATAGCAGCGCCA+TGG + chr4.4:88855750-88855769 MS.gene034074:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 88855262 88858802 88855262 ID=MS.gene034074
chr4.4 mRNA 88855262 88858802 88855262 ID=MS.gene034074.t1;Parent=MS.gene034074
chr4.4 exon 88855262 88855354 88855262 ID=MS.gene034074.t1.exon1;Parent=MS.gene034074.t1
chr4.4 CDS 88855262 88855354 88855262 ID=cds.MS.gene034074.t1;Parent=MS.gene034074.t1
chr4.4 exon 88856353 88858252 88856353 ID=MS.gene034074.t1.exon2;Parent=MS.gene034074.t1
chr4.4 CDS 88856353 88858252 88856353 ID=cds.MS.gene034074.t1;Parent=MS.gene034074.t1
chr4.4 exon 88858369 88858802 88858369 ID=MS.gene034074.t1.exon3;Parent=MS.gene034074.t1
chr4.4 CDS 88858369 88858802 88858369 ID=cds.MS.gene034074.t1;Parent=MS.gene034074.t1
Gene Sequence

>MS.gene034074

ATGGCACAAATTCATCTTCATGGTACTCTTCATGCTACTATCTATGAGGTTGATAAGCTTAATGCTGGTGGTGGTGGAAATTTCCTCAGCATGGTACTGTTTTATTTAATTATTTTGGTCTATTTGGCTCTGATGATTCAATTGTTGATTTTTAGTTTTGATGTTTTTGGATTTTGTAATTTTAAGTGCATGTGTTTTGATTTGTTTTTGCAAATGAGTGAATTGAAAAAAAGAATATTTTGGTGGTGGGGATCACTGATGCATCAAAGTGGACCCTGCTTGCTTTTAGGATCTGTGATCTGTTTCATTATTTTATATTGTACTATATCAATTAATAAATAAAAAGTTCTATTGATTTTTTTTTCTTCCAGTGAATCTGTGATTGAGACTTACATTTTTAATCTGATCTTAAATTATGTAGCGACATGCATCATTTTTCTGATACTACCGATCATTTGCATACCCTTGGGCGATTAGTGTTGTCAAATGTCGGGCCATAGCAGCGCCATGGCGGATTTTTTGGCAACCGCCATACCTAATTTGTAACAGATGGTGGGGCCATGGATTTTTAAGGTGGCTCAAAATGACGGACTTTTGGTTTTGCACCATGGTCCGCCATCTGCAATCGATAACACTGATCTATATGAGTGATTGTTGTCATGGTTTCTTATACCAAATCTTAATTAACATGTAATTTAATTGTTTGCTTGACATGATTCAAGATTGTCGCCTTCGATTGAAACTACCTTGTGTTCATTCAACTGATCTTTTACCTGAATAACCATTAACTTTATCTTATGCATCTTTTGTAACACATATGCAATGTTTTAGTAAAAAAATTGTGTGTGCTTCAGCACCTTACTCATTGGATTTTGCTTTCGTTATTGGATTTTATACATTGCACATACATACATAGGAGACTGATCTTTTACCTGAATAACCAAAGCTAAATCAAACAAATTAATGTCGATTGTTTATGTTTATACATACATTCACATGGTGAAAAGAGAATATCCAGTTTCTTTAGTTTTGCGTTTTTATTTTCATCCTTCATTATTAATGACCCTATTTATTTGCTTATACTTATACAGATCAGGCAAAACATTGAGGAAACTGTTGGTCTTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCGAGAGTGGGAAGGACAAGAATTATTGAAAATGAGCATACTAATCCCAAATGGTACGAGTCTTTTCACATTTACTGTGCTCATATGGCTTCAGATATCATATTCACTGTGAAAGATGATAATCCTGTTGGAGCAACATTAATCGGAAGAGCATATGTGCCTGTCGAGGAGGTCTTGAATGGTGAGGAAATTGATAGGTGGGTGGAAATTTTGGACACTGAAAAAAACCCGATACAAGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACGAAAGACCGCAGTTGGGCTCGAGGCATTCAAAGCGCTAAATTTCCTGGAGTTCCGTATACTTTTTTCTCACAGAGGAAAGGATGTAAGGTATCTCTTTACCAAGATTCTCATGTGCCGGATAATTTCATCCCTAAAATACCACTTTCTGGTGGCAAGACTTATCAGCCTCATCGGTGTTGGGAGGATATTTATGATGCCATCACTAATGCAAAACACATGATATACATTACCGGTTGGTCTGTTTATACCGAAATTTCTTTGGTGAGGGATTCTAGGAGGCCAAAGGCTGGGGGAGACACAACAATTGGTGAGCTTCTAAAGAAAAAGTCTAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGTTTGATGGCTACTCATGACGAAGAAACCGCACAGTTCTTTGAAGGTACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGTAGCATCATTCAGGATTTACAAGTTTCCACCATGTTTACTCATCACCAGAAGATTGTGGTTGTGGACAGTGAATTACCTGGTGGAAGGTCGGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTCTCGACCTTTGTGATGGAAGATATGATACTCCATTCCACTCACTTTTTAGAACTCTTGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCAGGTGCTGCAATCACAAAAGGCGGTCCAAGGGAACCTTGGCATGACATTCATTCCCGCCTTGAAGGACCGATCGCTTGGGATGTGTTGTTTAACTTTGAGCAACGATGGAGGAAGCAAGGTGGGAAGGATTTACTTGTCTCTCTAAGGGAGCTTGAAGATTCTATTATTCCTCCATCCCCGGTAACATTTCCGGATGATCACGAGACATGGAATGTTCAGCTGTTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGAAACTCCTGAAGATGCTGCGAGAGCTGGGCTTATTAGTGGAAAGGATAATATCATCGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGGCGTGCAAAGAACTTCATCTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGGTGAGGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTCATCCCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGGGGAAAAGTTCACTGTGTACGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCGGTTCAAGCAATATTGGACTGGCAGAGGAGAACAATGGAGATGATGTACAAGGATATCGTTCTGGCACTCAGGGCAAAGGGAATCGAGGAAGATCCTCGGAATTATTTGACGTTCTTCTGCCTCGGTAATCGGGAAGTAAAGAAACAAGGAGAGTACGAGCCTTCCGAACAACCAGAACCTGATTCAGATTACGAGAGAGCCCAACAGTCCCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGGTAAGTTTGAAAATTACTGTCATAAATTACAGCCTGCAGCAATCTCACAAATTTTGAAGCATTATTTTTTAATCATTACTTTCATGATTATGCATACTTTCTTTCTTTCTTTGTAGTTGATGACGAATACATAATCGTTGGATCTGCCAACATCAACCAAAGATCAATGGACGGAGCGAGGGACTCTGAGATAGCGATGGGAGCCTATCAGCCCTACCATTTAGCTGCAAGACAGCCAGCACGTGGTCAAGTCCATGGTTTTCGCATGGCATTATGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTCATCCAGAAAATCAAGAATGTATCCGTAAGGTGAACCAGATTGCAGACAAATATTGGGATCTCTATTCAAACGATTCACTCGAGCACGACCTTCCTGGACACTTGCTTCGCTATCCGATTGGAGTTGCTAGTGAAGGAGATGTCACACAGCTGCCTGGATTTGAATTTTTCCCCGACACCAAGGCTCGAATTCTCGGCGGCAAAGCTGATTACCTCCCTCCTATCCTCACTACTTAG
Protein sequence

>MS.gene034074.t1

MAQIHLHGTLHATIYEVDKLNAGGGGNFLSMIRQNIEETVGLGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHMASDIIFTVKDDNPVGATLIGRAYVPVEEVLNGEEIDRWVEILDTEKNPIQEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRKGCKVSLYQDSHVPDNFIPKIPLSGGKTYQPHRCWEDIYDAITNAKHMIYITGWSVYTEISLVRDSRRPKAGGDTTIGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFEGTDVHCVLCPRNPDDGGSIIQDLQVSTMFTHHQKIVVVDSELPGGRSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSGEDIKPEDIGALHLIPKELSLKIMSKIEAGEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVLALRAKGIEEDPRNYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQVHGFRMALWYEHLGMLHDSFLHPENQECIRKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVASEGDVTQLPGFEFFPDTKARILGGKADYLPPILTT