Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035364.t1 | XP_013458264.1 | 97.4 | 378 | 10 | 0 | 17 | 394 | 143 | 520 | 7.20E-192 | 679.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035364.t1 | Q9M7Z1 | 67.3 | 312 | 93 | 2 | 83 | 394 | 181 | 483 | 1.1e-116 | 421.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035364.t1 | A0A072V2G4 | 97.4 | 378 | 10 | 0 | 17 | 394 | 143 | 520 | 5.2e-192 | 679.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035364 | MS.gene63889 | PPI |
| MS.gene035364 | MS.gene00641 | PPI |
| MS.gene037762 | MS.gene035364 | PPI |
| MS.gene035364 | MS.gene047179 | PPI |
| MS.gene035364 | MS.gene48056 | PPI |
| MS.gene035364 | MS.gene020723 | PPI |
| MS.gene035364 | MS.gene002068 | PPI |
| MS.gene035364 | MS.gene73491 | PPI |
| MS.gene035364 | MS.gene065539 | PPI |
| MS.gene035364 | MS.gene020722 | PPI |
| MS.gene80759 | MS.gene035364 | PPI |
| MS.gene035364 | MS.gene81790 | PPI |
| MS.gene035364 | MS.gene81379 | PPI |
| MS.gene035364 | MS.gene061817 | PPI |
| MS.gene035364 | MS.gene072037 | PPI |
| MS.gene035364 | MS.gene073516 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035364.t1 | MTR_4g120220 | 97.354 | 378 | 10 | 0 | 17 | 394 | 143 | 520 | 0.0 | 753 |
| MS.gene035364.t1 | MTR_8g018770 | 27.044 | 318 | 196 | 9 | 84 | 391 | 252 | 543 | 6.84e-28 | 115 |
| MS.gene035364.t1 | MTR_1g111140 | 30.844 | 308 | 200 | 5 | 84 | 391 | 176 | 470 | 2.32e-26 | 110 |
| MS.gene035364.t1 | MTR_1g091037 | 27.879 | 330 | 227 | 6 | 54 | 377 | 295 | 619 | 6.08e-26 | 110 |
| MS.gene035364.t1 | MTR_1g091037 | 28.049 | 328 | 225 | 6 | 54 | 375 | 287 | 609 | 6.43e-26 | 110 |
| MS.gene035364.t1 | MTR_2g006820 | 32.367 | 207 | 133 | 4 | 188 | 393 | 253 | 453 | 4.12e-23 | 100 |
| MS.gene035364.t1 | MTR_5g093300 | 32.367 | 207 | 133 | 4 | 188 | 393 | 255 | 455 | 4.78e-23 | 100 |
| MS.gene035364.t1 | MTR_1g096240 | 28.526 | 312 | 190 | 5 | 84 | 391 | 175 | 457 | 5.91e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035364.t1 | AT3G06850 | 63.743 | 342 | 115 | 2 | 53 | 394 | 151 | 483 | 5.49e-150 | 433 |
| MS.gene035364.t1 | AT3G06850 | 63.743 | 342 | 115 | 2 | 53 | 394 | 151 | 483 | 5.49e-150 | 433 |
| MS.gene035364.t1 | AT1G54220 | 28.391 | 317 | 194 | 10 | 84 | 391 | 247 | 539 | 1.46e-29 | 120 |
| MS.gene035364.t1 | AT1G54220 | 28.391 | 317 | 194 | 10 | 84 | 391 | 247 | 539 | 1.46e-29 | 120 |
| MS.gene035364.t1 | AT3G25860 | 30.293 | 307 | 201 | 5 | 85 | 391 | 187 | 480 | 3.45e-29 | 118 |
| MS.gene035364.t1 | AT3G13930 | 29.063 | 320 | 188 | 12 | 84 | 391 | 247 | 539 | 1.03e-28 | 117 |
| MS.gene035364.t1 | AT3G52200 | 28.939 | 311 | 210 | 6 | 87 | 391 | 408 | 713 | 1.47e-24 | 106 |
| MS.gene035364.t1 | AT3G52200 | 28.939 | 311 | 210 | 6 | 87 | 391 | 332 | 637 | 1.88e-24 | 105 |
| MS.gene035364.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 192 | 393 | 166 | 365 | 8.48e-23 | 99.0 |
| MS.gene035364.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 192 | 393 | 264 | 463 | 2.45e-22 | 99.0 |
| MS.gene035364.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 192 | 393 | 265 | 464 | 2.46e-22 | 99.0 |
| MS.gene035364.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 192 | 393 | 265 | 464 | 4.90e-22 | 97.8 |
| MS.gene035364.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 192 | 393 | 265 | 464 | 4.90e-22 | 97.8 |
| MS.gene035364.t1 | AT1G34430 | 27.419 | 310 | 192 | 5 | 84 | 389 | 183 | 463 | 9.91e-20 | 91.3 |
Find 0 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATTCTTTAAAAATCA+TGG | + | 32571:26366-26385 | MS.gene035364:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | + | 32571:25656-25675 | MS.gene035364:intron | 10.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | - | 32571:25000-25019 | MS.gene035364:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | - | 32571:25711-25730 | MS.gene035364:intergenic | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | - | 32571:27087-27106 | MS.gene035364:intergenic | 15.0% |
| !! | ATCACAATATAAATTTGACA+CGG | + | 32571:26594-26613 | MS.gene035364:intron | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | + | 32571:25390-25409 | MS.gene035364:CDS | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | + | 32571:26143-26162 | MS.gene035364:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | + | 32571:27183-27202 | MS.gene035364:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | - | 32571:25001-25020 | MS.gene035364:intergenic | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | - | 32571:26141-26160 | MS.gene035364:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | + | 32571:25869-25888 | MS.gene035364:intron | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | - | 32571:25738-25757 | MS.gene035364:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | + | 32571:27108-27127 | MS.gene035364:intron | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | - | 32571:26594-26613 | MS.gene035364:intergenic | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | - | 32571:26546-26565 | MS.gene035364:intergenic | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | + | 32571:27184-27203 | MS.gene035364:intron | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | + | 32571:24952-24971 | MS.gene035364:CDS | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | + | 32571:24953-24972 | MS.gene035364:CDS | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | + | 32571:26476-26495 | MS.gene035364:intron | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | - | 32571:26688-26707 | MS.gene035364:intergenic | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | + | 32571:26552-26571 | MS.gene035364:intron | 20.0% |
| ! | AAAACCATAAATAACCATAC+AGG | - | 32571:26769-26788 | MS.gene035364:intergenic | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | + | 32571:25917-25936 | MS.gene035364:intron | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | - | 32571:24950-24969 | MS.gene035364:intergenic | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | - | 32571:26458-26477 | MS.gene035364:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | + | 32571:25594-25613 | MS.gene035364:intron | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | + | 32571:25230-25249 | MS.gene035364:CDS | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | - | 32571:25744-25763 | MS.gene035364:intergenic | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | - | 32571:26137-26156 | MS.gene035364:intergenic | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | + | 32571:26318-26337 | MS.gene035364:intron | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | - | 32571:25794-25813 | MS.gene035364:intergenic | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | + | 32571:26371-26390 | MS.gene035364:intron | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | + | 32571:26306-26325 | MS.gene035364:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | + | 32571:25963-25982 | MS.gene035364:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | + | 32571:25962-25981 | MS.gene035364:intron | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | + | 32571:25794-25813 | MS.gene035364:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | - | 32571:25438-25457 | MS.gene035364:intergenic | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | - | 32571:25439-25458 | MS.gene035364:intergenic | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | - | 32571:25594-25613 | MS.gene035364:intergenic | 25.0% |
| AAGAACCTAGATTCTGATAT+TGG | + | 32571:25143-25162 | MS.gene035364:CDS | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | + | 32571:26879-26898 | MS.gene035364:CDS | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | - | 32571:27147-27166 | MS.gene035364:intergenic | 30.0% | |
| AGTTAAAATCTTGTCATGGA+TGG | + | 32571:25598-25617 | MS.gene035364:intron | 30.0% | |
| CAATATAAATTTGACACGGT+AGG | + | 32571:26598-26617 | MS.gene035364:intron | 30.0% | |
| CGTCTACATAATGAAAATGT+GGG | - | 32571:26035-26054 | MS.gene035364:intergenic | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | + | 32571:25149-25168 | MS.gene035364:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | - | 32571:25795-25814 | MS.gene035364:intergenic | 30.0% | |
| GCAGACTCATTAACAAATAT+CGG | - | 32571:25086-25105 | MS.gene035364:intergenic | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | + | 32571:25150-25169 | MS.gene035364:CDS | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | - | 32571:26036-26055 | MS.gene035364:intergenic | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | - | 32571:26287-26306 | MS.gene035364:intergenic | 30.0% | |
| ! | CTTTACTAAGTCTTATGAGA+AGG | + | 32571:25793-25812 | MS.gene035364:intron | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | + | 32571:25964-25983 | MS.gene035364:intron | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | + | 32571:25795-25814 | MS.gene035364:intron | 30.0% |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | + | 32571:24965-24984 | MS.gene035364:CDS | 30.0% |
| !! | GTTAATTTGCATACATGACA+AGG | - | 32571:26436-26455 | MS.gene035364:intergenic | 30.0% |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | + | 32571:25291-25310 | MS.gene035364:CDS | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | - | 32571:25437-25456 | MS.gene035364:intergenic | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | + | 32571:27244-27263 | MS.gene035364:intron | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | + | 32571:24969-24988 | MS.gene035364:CDS | 30.0% |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | + | 32571:27234-27253 | MS.gene035364:intron | 30.0% |
| AAATCATGGTGAGGTTAAAC+AGG | + | 32571:26380-26399 | MS.gene035364:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | - | 32571:25074-25093 | MS.gene035364:intergenic | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | + | 32571:26613-26632 | MS.gene035364:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | + | 32571:26842-26861 | MS.gene035364:CDS | 35.0% | |
| AGATAGGCCGAATATGATAA+GGG | - | 32571:25578-25597 | MS.gene035364:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | - | 32571:25901-25920 | MS.gene035364:intergenic | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | + | 32571:25236-25255 | MS.gene035364:CDS | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | + | 32571:26762-26781 | MS.gene035364:intron | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | + | 32571:25148-25167 | MS.gene035364:CDS | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | - | 32571:25151-25170 | MS.gene035364:intergenic | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | + | 32571:26628-26647 | MS.gene035364:intron | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | + | 32571:27151-27170 | MS.gene035364:intron | 35.0% | |
| GATGGTAAAATCAATGTCTC+TGG | + | 32571:25999-26018 | MS.gene035364:CDS | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | + | 32571:25601-25620 | MS.gene035364:intron | 35.0% | |
| TAAATATGATAGGCCTTCTG+AGG | + | 32571:25400-25419 | MS.gene035364:CDS | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | - | 32571:25579-25598 | MS.gene035364:intergenic | 35.0% | |
| TGAAGTCATTCTCAAAGGTT+TGG | + | 32571:26215-26234 | MS.gene035364:intron | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | + | 32571:26699-26718 | MS.gene035364:CDS | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | + | 32571:26852-26871 | MS.gene035364:CDS | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | - | 32571:25782-25801 | MS.gene035364:intergenic | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | - | 32571:27144-27163 | MS.gene035364:intergenic | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | + | 32571:26888-26907 | MS.gene035364:CDS | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | - | 32571:26716-26735 | MS.gene035364:intergenic | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | + | 32571:26210-26229 | MS.gene035364:CDS | 35.0% |
| ! | GTTTGGTTCGTCTACATAAT+TGG | + | 32571:26232-26251 | MS.gene035364:intron | 35.0% |
| ! | TACATGAATTTGAAGCCACT+CGG | + | 32571:25457-25476 | MS.gene035364:intron | 35.0% |
| ! | TTGATTTTACCATCGCTCTT+TGG | - | 32571:25993-26012 | MS.gene035364:intergenic | 35.0% |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | + | 32571:25290-25309 | MS.gene035364:CDS | 35.0% |
| AAATGCAACACGAGTAACTC+TGG | - | 32571:27343-27362 | MS.gene035364:intergenic | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | - | 32571:26964-26983 | MS.gene035364:intergenic | 40.0% | |
| ACACAACATTGGAATTGCGA+TGG | + | 32571:26639-26658 | MS.gene035364:CDS | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | + | 32571:26802-26821 | MS.gene035364:intron | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | + | 32571:26891-26910 | MS.gene035364:CDS | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | - | 32571:25937-25956 | MS.gene035364:intergenic | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | + | 32571:26752-26771 | MS.gene035364:intron | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | - | 32571:26945-26964 | MS.gene035364:intergenic | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | - | 32571:26946-26965 | MS.gene035364:intergenic | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | + | 32571:26945-26964 | MS.gene035364:CDS | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | - | 32571:25577-25596 | MS.gene035364:intergenic | 40.0% | |
| GGTTTAAAAATCAGCAGGAC+AGG | + | 32571:25631-25650 | MS.gene035364:intron | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | - | 32571:26111-26130 | MS.gene035364:intergenic | 40.0% | |
| TAAAGACCTTGGTCATGAGA+AGG | + | 32571:25928-25947 | MS.gene035364:intron | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | + | 32571:26702-26721 | MS.gene035364:CDS | 40.0% | |
| TCCTGTCCCCTTATCATATT+CGG | + | 32571:25568-25587 | MS.gene035364:intron | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | + | 32571:25250-25269 | MS.gene035364:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | + | 32571:25186-25205 | MS.gene035364:CDS | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | - | 32571:26183-26202 | MS.gene035364:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | - | 32571:26987-27006 | MS.gene035364:intergenic | 40.0% | |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | + | 32571:25799-25818 | MS.gene035364:intron | 40.0% |
| ! | TTGCAAGATTTTGCAACGAG+TGG | + | 32571:27299-27318 | MS.gene035364:CDS | 40.0% |
| ! | TTTGAAGCAACTGTTCACAG+AGG | - | 32571:26184-26203 | MS.gene035364:intergenic | 40.0% |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | + | 32571:25626-25645 | MS.gene035364:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | + | 32571:25347-25366 | MS.gene035364:CDS | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | + | 32571:26409-26428 | MS.gene035364:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | + | 32571:25346-25365 | MS.gene035364:CDS | 40.0% |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | + | 32571:25332-25351 | MS.gene035364:CDS | 40.0% |
| AAAGTCGTTGAAGGACATGC+AGG | - | 32571:25026-25045 | MS.gene035363:intergenic | 45.0% | |
| ACAAGGACCAAAGAGCCAAT+AGG | - | 32571:26419-26438 | MS.gene035364:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | - | 32571:26930-26949 | MS.gene035364:intergenic | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | + | 32571:26855-26874 | MS.gene035364:CDS | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | + | 32571:25161-25180 | MS.gene035364:CDS | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | + | 32571:26944-26963 | MS.gene035364:CDS | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | + | 32571:26053-26072 | MS.gene035364:CDS | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | - | 32571:27017-27036 | MS.gene035364:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | - | 32571:26929-26948 | MS.gene035364:intergenic | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | + | 32571:26967-26986 | MS.gene035364:CDS | 45.0% | |
| GAGTCACCAAAAGTCGTTGA+AGG | - | 32571:25035-25054 | MS.gene035364:intergenic | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | + | 32571:26056-26075 | MS.gene035364:CDS | 45.0% | |
| GCTAGCAAGGTTGCAACAAT+TGG | + | 32571:26815-26834 | MS.gene035364:CDS | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | + | 32571:26900-26919 | MS.gene035364:CDS | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | + | 32571:25245-25264 | MS.gene035364:CDS | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | + | 32571:25249-25268 | MS.gene035364:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | + | 32571:26856-26875 | MS.gene035364:CDS | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | - | 32571:25329-25348 | MS.gene035364:intergenic | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | - | 32571:26182-26201 | MS.gene035364:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | + | 32571:25199-25218 | MS.gene035364:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | - | 32571:26862-26881 | MS.gene035364:intergenic | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | - | 32571:26928-26947 | MS.gene035364:intergenic | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | - | 32571:25200-25219 | MS.gene035364:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | + | 32571:25026-25045 | MS.gene035364:CDS | 45.0% |
| ! | GGTTGCACTCATTAGCCTAT+TGG | + | 32571:26401-26420 | MS.gene035364:intron | 45.0% |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | - | 32571:26811-26830 | MS.gene035364:intergenic | 45.0% |
| AGGACACGATACTTCCCCTT+AGG | + | 32571:25420-25439 | MS.gene035364:CDS | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | + | 32571:25206-25225 | MS.gene035364:CDS | 50.0% | |
| ATTGCGATGGCAACACCACA+TGG | + | 32571:26652-26671 | MS.gene035364:CDS | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | + | 32571:25356-25375 | MS.gene035364:CDS | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | + | 32571:27268-27287 | MS.gene035364:CDS | 50.0% | |
| GCCGAATATGATAAGGGGAC+AGG | - | 32571:25572-25591 | MS.gene035364:intergenic | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | + | 32571:26981-27000 | MS.gene035364:CDS | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | + | 32571:25981-26000 | MS.gene035364:intron | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | + | 32571:25606-25625 | MS.gene035364:intron | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | + | 32571:27264-27283 | MS.gene035364:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | - | 32571:26670-26689 | MS.gene035364:intergenic | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | + | 32571:25464-25483 | MS.gene035364:intron | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | + | 32571:25465-25484 | MS.gene035364:intron | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | - | 32571:26074-26093 | MS.gene035364:intergenic | 50.0% |
| !! | CGACGTTTTAAGCTCCACCA+GGG | - | 32571:26073-26092 | MS.gene035364:intergenic | 50.0% |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | - | 32571:25416-25435 | MS.gene035364:intergenic | 50.0% |
| CTCTTATCCCTGCTACCGAG+TGG | - | 32571:25475-25494 | MS.gene035364:intergenic | 55.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | + | 32571:25610-25629 | MS.gene035364:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32571 | gene | 24936 | 27369 | 24936 | ID=MS.gene035364 |
| 32571 | mRNA | 24936 | 27369 | 24936 | ID=MS.gene035364.t1;Parent=MS.gene035364 |
| 32571 | exon | 24936 | 25441 | 24936 | ID=MS.gene035364.t1.exon1;Parent=MS.gene035364.t1 |
| 32571 | CDS | 24936 | 25441 | 24936 | ID=cds.MS.gene035364.t1;Parent=MS.gene035364.t1 |
| 32571 | exon | 25984 | 26231 | 25984 | ID=MS.gene035364.t1.exon2;Parent=MS.gene035364.t1 |
| 32571 | CDS | 25984 | 26231 | 25984 | ID=cds.MS.gene035364.t1;Parent=MS.gene035364.t1 |
| 32571 | exon | 26635 | 26723 | 26635 | ID=MS.gene035364.t1.exon3;Parent=MS.gene035364.t1 |
| 32571 | CDS | 26635 | 26723 | 26635 | ID=cds.MS.gene035364.t1;Parent=MS.gene035364.t1 |
| 32571 | exon | 26804 | 27031 | 26804 | ID=MS.gene035364.t1.exon4;Parent=MS.gene035364.t1 |
| 32571 | CDS | 26804 | 27031 | 26804 | ID=cds.MS.gene035364.t1;Parent=MS.gene035364.t1 |
| 32571 | exon | 27256 | 27369 | 27256 | ID=MS.gene035364.t1.exon5;Parent=MS.gene035364.t1 |
| 32571 | CDS | 27256 | 27369 | 27256 | ID=cds.MS.gene035364.t1;Parent=MS.gene035364.t1 |
| Gene Sequence |
| Protein sequence |
