Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061817.t1 | XP_003617592.1 | 94.6 | 392 | 21 | 0 | 19 | 410 | 64 | 455 | 2.90E-183 | 651.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061817.t1 | Q8H107 | 72.5 | 415 | 107 | 3 | 2 | 410 | 51 | 464 | 4.7e-142 | 505.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061817.t1 | G7K3L9 | 94.6 | 392 | 21 | 0 | 19 | 410 | 64 | 455 | 2.1e-183 | 651.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061817.t1 | MTR_5g093300 | 98.214 | 392 | 7 | 0 | 19 | 410 | 64 | 455 | 0.0 | 782 |
| MS.gene061817.t1 | MTR_2g006820 | 98.219 | 393 | 6 | 1 | 19 | 410 | 61 | 453 | 0.0 | 780 |
| MS.gene061817.t1 | MTR_8g018770 | 28.604 | 444 | 249 | 11 | 31 | 408 | 102 | 543 | 1.84e-39 | 148 |
| MS.gene061817.t1 | MTR_1g091037 | 30.928 | 388 | 229 | 10 | 51 | 408 | 255 | 633 | 6.85e-34 | 134 |
| MS.gene061817.t1 | MTR_1g091037 | 30.928 | 388 | 229 | 10 | 51 | 408 | 247 | 625 | 9.19e-34 | 133 |
| MS.gene061817.t1 | MTR_4g120220 | 32.367 | 207 | 133 | 4 | 210 | 410 | 314 | 519 | 1.08e-22 | 100 |
| MS.gene061817.t1 | MTR_1g111140 | 25.647 | 425 | 253 | 11 | 43 | 408 | 50 | 470 | 2.76e-22 | 99.0 |
| MS.gene061817.t1 | MTR_5g092530 | 95.000 | 40 | 2 | 0 | 308 | 347 | 4 | 43 | 9.31e-19 | 80.1 |
| MS.gene061817.t1 | MTR_1g096240 | 31.847 | 157 | 101 | 3 | 254 | 406 | 301 | 455 | 7.78e-18 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061817.t1 | AT4G26910 | 70.531 | 414 | 117 | 2 | 2 | 410 | 51 | 464 | 0.0 | 587 |
| MS.gene061817.t1 | AT4G26910 | 73.522 | 389 | 100 | 1 | 25 | 410 | 75 | 463 | 0.0 | 585 |
| MS.gene061817.t1 | AT5G55070 | 75.959 | 391 | 92 | 1 | 22 | 410 | 74 | 464 | 0.0 | 579 |
| MS.gene061817.t1 | AT5G55070 | 75.959 | 391 | 92 | 1 | 22 | 410 | 74 | 464 | 0.0 | 579 |
| MS.gene061817.t1 | AT4G26910 | 75.342 | 365 | 87 | 1 | 49 | 410 | 1 | 365 | 0.0 | 555 |
| MS.gene061817.t1 | AT1G54220 | 28.728 | 456 | 255 | 13 | 20 | 408 | 87 | 539 | 3.77e-39 | 147 |
| MS.gene061817.t1 | AT1G54220 | 28.728 | 456 | 255 | 13 | 20 | 408 | 87 | 539 | 3.77e-39 | 147 |
| MS.gene061817.t1 | AT3G13930 | 29.412 | 442 | 241 | 12 | 33 | 408 | 103 | 539 | 7.31e-38 | 144 |
| MS.gene061817.t1 | AT3G52200 | 37.500 | 232 | 132 | 5 | 185 | 408 | 411 | 637 | 1.20e-34 | 135 |
| MS.gene061817.t1 | AT3G52200 | 37.500 | 232 | 132 | 5 | 185 | 408 | 487 | 713 | 5.14e-34 | 134 |
| MS.gene061817.t1 | AT3G06850 | 29.208 | 202 | 139 | 3 | 212 | 410 | 282 | 482 | 1.25e-22 | 100 |
| MS.gene061817.t1 | AT3G06850 | 29.208 | 202 | 139 | 3 | 212 | 410 | 282 | 482 | 1.25e-22 | 100 |
| MS.gene061817.t1 | AT3G25860 | 30.894 | 246 | 149 | 7 | 171 | 408 | 248 | 480 | 2.29e-19 | 90.5 |
| MS.gene061817.t1 | AT1G34430 | 32.484 | 157 | 100 | 3 | 254 | 406 | 309 | 463 | 3.90e-18 | 86.7 |
Find 106 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCAAATGGTGGTGTTTA+TGG | 0.206829 | 5.1:+74327972 | MS.gene061817:CDS |
| CCTCCGGCTCACTAGCCTTT+GGG | 0.238417 | 5.1:-74326107 | None:intergenic |
| CTTTGTGGAGCAGGTGCTTT+AGG | 0.246900 | 5.1:-74326168 | None:intergenic |
| ACCTGAGGTGGGTTGATAAT+AGG | 0.248348 | 5.1:-74328011 | None:intergenic |
| TCTGTTGTAGTTTCAACTTT+AGG | 0.270428 | 5.1:-74326141 | None:intergenic |
| TGAAAAGCATGGAGTCAAAT+TGG | 0.271200 | 5.1:+74327226 | MS.gene061817:CDS |
| TCAGCATAGCAAATGTGTTT+TGG | 0.289140 | 5.1:-74326368 | None:intergenic |
| CCTGAGGTGGGTTGATAATA+GGG | 0.311518 | 5.1:-74328010 | None:intergenic |
| TCTGTTTCAATTTGAGCAAT+TGG | 0.327060 | 5.1:-74325674 | None:intergenic |
| CTAGCCTTTGGGGCTGGCTT+AGG | 0.329554 | 5.1:-74326096 | None:intergenic |
| CTCTTCCATCAATGATTCTA+TGG | 0.339946 | 5.1:-74328537 | None:intergenic |
| GTCAAATTGGGACTTATGTC+TGG | 0.343056 | 5.1:+74327239 | MS.gene061817:CDS |
| TCCTCCGGCTCACTAGCCTT+TGG | 0.345311 | 5.1:-74326108 | None:intergenic |
| GGCTTAGGAGCAGGTTTCTC+AGG | 0.352013 | 5.1:-74326081 | None:intergenic |
| TATGACAAGGCTTCGGAAAC+GGG | 0.382455 | 5.1:+74326323 | MS.gene061817:CDS |
| GGCTCACTAGCCTTTGGGGC+TGG | 0.385354 | 5.1:-74326102 | None:intergenic |
| GTTGGAGAGCTTTGTGGAGC+AGG | 0.388293 | 5.1:-74326177 | None:intergenic |
| GAAGCTCCGTGCTGATTATA+AGG | 0.392323 | 5.1:+74327193 | MS.gene061817:CDS |
| GGCTCAGTTGGAGAGCTTTG+TGG | 0.393131 | 5.1:-74326183 | None:intergenic |
| TTACATATCAACTTCATTGA+AGG | 0.400847 | 5.1:-74326394 | None:intergenic |
| GTGAGCCGTCCCGCGGTTGT+TGG | 0.403007 | 5.1:+74328466 | MS.gene061817:CDS |
| TTTGGGGCTGGCTTAGGAGC+AGG | 0.406888 | 5.1:-74326090 | None:intergenic |
| TCAATGACTGCATTTACAAT+TGG | 0.409888 | 5.1:-74327389 | None:intergenic |
| ACTCGTCTTTCTCTTTCCTT+AGG | 0.413435 | 5.1:-74326216 | None:intergenic |
| CGTTTCCGAAGCCTTGTCAT+AGG | 0.415332 | 5.1:-74326321 | None:intergenic |
| TATGACCATAGAATCATTGA+TGG | 0.416138 | 5.1:+74328532 | MS.gene061817:CDS |
| CTATGACAAGGCTTCGGAAA+CGG | 0.424020 | 5.1:+74326322 | MS.gene061817:CDS |
| ATTGTAAATGCAGTCATTGA+TGG | 0.425090 | 5.1:+74327392 | MS.gene061817:CDS |
| GCAATGTACATCAGTGGCCT+TGG | 0.441430 | 5.1:-74328502 | None:intergenic |
| TGAACGCTTCCATGTTTGAA+TGG | 0.441701 | 5.1:-74324840 | None:intergenic |
| GAAAAGCATGGAGTCAAATT+GGG | 0.444613 | 5.1:+74327227 | MS.gene061817:CDS |
| CACCACCAAACTTAAAAGCT+TGG | 0.445051 | 5.1:-74324450 | None:intergenic |
| TTAGGAGCTTTCTTCTCCTC+CGG | 0.446856 | 5.1:-74326123 | None:intergenic |
| CCCTATTATCAACCCACCTC+AGG | 0.456935 | 5.1:+74328010 | MS.gene061817:CDS |
| CTCCGGCTCACTAGCCTTTG+GGG | 0.458282 | 5.1:-74326106 | None:intergenic |
| AGCCGTCCCGCGGTTGTTGG+AGG | 0.472187 | 5.1:+74328469 | MS.gene061817:CDS |
| CGCAACAGTATCCCCTTCAT+TGG | 0.474947 | 5.1:-74325986 | None:intergenic |
| TGATGTTGTTGTCCCTCCAT+TGG | 0.485369 | 5.1:+74325476 | MS.gene061817:CDS |
| ATCACACCTGACTCAGGACT+TGG | 0.485461 | 5.1:-74325834 | None:intergenic |
| AGCCCCAAAGGCTAGTGAGC+CGG | 0.486831 | 5.1:+74326104 | MS.gene061817:CDS |
| TGCGGATAAAATGAACTTTG+CGG | 0.492760 | 5.1:+74327863 | MS.gene061817:CDS |
| GGAGGAAGCTGTGGCTCAGT+TGG | 0.493329 | 5.1:-74326195 | None:intergenic |
| CGTCTTTCTCTTTCCTTAGG+AGG | 0.498109 | 5.1:-74326213 | None:intergenic |
| TTGTAAATGCAGTCATTGAT+GGG | 0.501189 | 5.1:+74327393 | MS.gene061817:CDS |
| TGATATTGTAAGAGTGCCTC+CGG | 0.502549 | 5.1:-74327955 | None:intergenic |
| AGGTTCCTATGACAAGGCTT+CGG | 0.505128 | 5.1:+74326316 | MS.gene061817:intron |
| TTTGCAAAGAAGGCTAATGC+TGG | 0.505721 | 5.1:+74327909 | MS.gene061817:CDS |
| AACTTTATCAATTGATGAGA+TGG | 0.507014 | 5.1:+74327932 | MS.gene061817:CDS |
| GGCACTCTTACAATATCAAA+TGG | 0.507367 | 5.1:+74327960 | MS.gene061817:CDS |
| TTCTCAGGTGCAGTCTCAGA+TGG | 0.513900 | 5.1:-74326066 | None:intergenic |
| ACAAGATAGCAATCATTTCA+AGG | 0.513907 | 5.1:+74326016 | MS.gene061817:CDS |
| ATTGATATCAGCATAGCTGT+TGG | 0.518591 | 5.1:+74327440 | MS.gene061817:CDS |
| TGAGCCACAGCTTCCTCCTA+AGG | 0.520051 | 5.1:+74326200 | MS.gene061817:CDS |
| GTGCAGCTTCTAGCCAATGA+AGG | 0.523506 | 5.1:+74325973 | MS.gene061817:intron |
| TTATCCGCATTTCGGATGAC+AGG | 0.524831 | 5.1:-74327849 | None:intergenic |
| ACGGGTTGCTCAACGGTTGA+AGG | 0.526760 | 5.1:+74326341 | MS.gene061817:CDS |
| TTGGCTGAATCCATCGAGGA+TGG | 0.531002 | 5.1:+74325495 | MS.gene061817:CDS |
| TCAAATTGGGACTTATGTCT+GGG | 0.531187 | 5.1:+74327240 | MS.gene061817:CDS |
| CAGAACATGCAAACCTGAGG+TGG | 0.531376 | 5.1:-74328023 | None:intergenic |
| GATGTTCCAAGTCCTGAGTC+AGG | 0.534338 | 5.1:+74325828 | MS.gene061817:CDS |
| GAAGGGGATACTGTTGCGCC+AGG | 0.534623 | 5.1:+74325991 | MS.gene061817:CDS |
| TGCTCAAATTGAAACAGATA+AGG | 0.537580 | 5.1:+74325679 | MS.gene061817:CDS |
| TGCTAGAGTCCCATCCTCGA+TGG | 0.542822 | 5.1:-74325505 | None:intergenic |
| TCCTCGATGGATTCAGCCAA+TGG | 0.546717 | 5.1:-74325492 | None:intergenic |
| TTGGAGGAAATGTTGTTCCA+AGG | 0.547451 | 5.1:+74328485 | MS.gene061817:CDS |
| TTATCAATTGATGAGATGGC+CGG | 0.550379 | 5.1:+74327936 | MS.gene061817:CDS |
| TGCTCCTAAGCCAGCCCCAA+AGG | 0.557645 | 5.1:+74326092 | MS.gene061817:CDS |
| GGGAGCAGGGCCTGGTGACA+AGG | 0.557791 | 5.1:+74325637 | MS.gene061817:intron |
| TTCAGGATCACACCTGACTC+AGG | 0.562746 | 5.1:-74325840 | None:intergenic |
| TGCAGCTTCTAGCCAATGAA+GGG | 0.566756 | 5.1:+74325974 | MS.gene061817:intron |
| CCCAAAGGCTAGTGAGCCGG+AGG | 0.568181 | 5.1:+74326107 | MS.gene061817:CDS |
| AAAAGCTTGGTTATCATCTG+AGG | 0.568710 | 5.1:-74324437 | None:intergenic |
| ATGATTGCTATCTTGTTACC+TGG | 0.569069 | 5.1:-74326009 | None:intergenic |
| CTTTCCTTAGGAGGAAGCTG+TGG | 0.571886 | 5.1:-74326204 | None:intergenic |
| TTCGGAAACGGGTTGCTCAA+CGG | 0.579901 | 5.1:+74326334 | MS.gene061817:CDS |
| TTCAATTGTGAGCCGTCCCG+CGG | 0.584894 | 5.1:+74328459 | MS.gene061817:CDS |
| TGGCTGAATCCATCGAGGAT+GGG | 0.587628 | 5.1:+74325496 | MS.gene061817:CDS |
| CATAGCTGTTGGAACTCCGA+AGG | 0.588524 | 5.1:+74327451 | MS.gene061817:CDS |
| CGATGGATTCAGCCAATGGA+GGG | 0.590845 | 5.1:-74325488 | None:intergenic |
| ATACCGTGGAGGACCCTCGC+AGG | 0.593381 | 5.1:+74328590 | MS.gene061817:CDS |
| TTCCTCCAACAACCGCGGGA+CGG | 0.594469 | 5.1:-74328471 | None:intergenic |
| GATGCTTTCGTTGAAAAGCA+TGG | 0.597642 | 5.1:+74327215 | MS.gene061817:CDS |
| AACATTTCCTCCAACAACCG+CGG | 0.602311 | 5.1:-74328476 | None:intergenic |
| CAGTCTCAGATGGTGCAACG+TGG | 0.608587 | 5.1:-74326056 | None:intergenic |
| TAGAATCATTGATGGAAGAG+AGG | 0.619261 | 5.1:+74328540 | MS.gene061817:CDS |
| TCAACATTAACCTTGTCACC+AGG | 0.619340 | 5.1:-74325647 | None:intergenic |
| ACATTTCCTCCAACAACCGC+GGG | 0.622555 | 5.1:-74328475 | None:intergenic |
| CTGAGGTGGGTTGATAATAG+GGG | 0.623105 | 5.1:-74328009 | None:intergenic |
| TCGATGGATTCAGCCAATGG+AGG | 0.624022 | 5.1:-74325489 | None:intergenic |
| TGAGTCAGGTGTGATCCTGA+AGG | 0.632483 | 5.1:+74325842 | MS.gene061817:CDS |
| TCAATTGATGAGATGGCCGG+AGG | 0.637833 | 5.1:+74327939 | MS.gene061817:CDS |
| ATGTCGAGCAAAAGCCTGCG+AGG | 0.639988 | 5.1:-74328604 | None:intergenic |
| AAGAGGCTTCCATTCAAACA+TGG | 0.648188 | 5.1:+74324831 | MS.gene061817:CDS |
| GTTAGAGCAATGTACATCAG+TGG | 0.653334 | 5.1:-74328508 | None:intergenic |
| AGAACATGCAAACCTGAGGT+GGG | 0.654926 | 5.1:-74328022 | None:intergenic |
| TGTCGAGCAAAAGCCTGCGA+GGG | 0.657173 | 5.1:-74328603 | None:intergenic |
| AAGCCTGCGAGGGTCCTCCA+CGG | 0.659181 | 5.1:-74328593 | None:intergenic |
| ACTCTTACAATATCAAATGG+TGG | 0.666602 | 5.1:+74327963 | MS.gene061817:CDS |
| AAGCATCCTTATAATCAGCA+CGG | 0.676021 | 5.1:-74327199 | None:intergenic |
| AGTCTCAGATGGTGCAACGT+GGG | 0.682584 | 5.1:-74326055 | None:intergenic |
| GAGACGGATCAAAGATACCG+TGG | 0.687859 | 5.1:+74328576 | MS.gene061817:CDS |
| GCAGCTTCTAGCCAATGAAG+GGG | 0.691382 | 5.1:+74325975 | MS.gene061817:intron |
| TCCATTGGCTGAATCCATCG+AGG | 0.719719 | 5.1:+74325491 | MS.gene061817:CDS |
| TGTAAATGCAGTCATTGATG+GGG | 0.721128 | 5.1:+74327394 | MS.gene061817:CDS |
| TGTGCCTGTCATCCGAAATG+CGG | 0.724515 | 5.1:+74327845 | MS.gene061817:CDS |
| ACGGATCAAAGATACCGTGG+AGG | 0.738229 | 5.1:+74328579 | MS.gene061817:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATGATAATAAACAAA+TGG | - | chr5.1:74327080-74327099 | None:intergenic | 10.0% |
| !! | ATTTGTTTATTATCATTTAT+TGG | + | chr5.1:74327079-74327098 | MS.gene061817:intron | 10.0% |
| !! | GATTTATTGTAATAGAATTT+AGG | + | chr5.1:74325088-74325107 | MS.gene061817:intron | 15.0% |
| !! | TTATGGTAATATTTAATCAT+TGG | + | chr5.1:74328094-74328113 | MS.gene061817:intron | 15.0% |
| !! | TTATTTAATTAGTAAGAGTT+AGG | + | chr5.1:74325320-74325339 | MS.gene061817:intron | 15.0% |
| !!! | AATTTTAACTTTTATGAAAG+AGG | + | chr5.1:74324989-74325008 | MS.gene061817:intron | 15.0% |
| !!! | ATATTTTTTGTTTTGATGTA+TGG | + | chr5.1:74325616-74325635 | MS.gene061817:intron | 15.0% |
| !!! | TAAGCAAAATTTAACATTTT+AGG | - | chr5.1:74326609-74326628 | None:intergenic | 15.0% |
| !!! | TATTTTTTGTTTTGATGTAT+GGG | + | chr5.1:74325617-74325636 | MS.gene061817:intron | 15.0% |
| !!! | TTATTTTATAGTACATTCTT+AGG | + | chr5.1:74328070-74328089 | MS.gene061817:intron | 15.0% |
| !! | AAACAGTGTTAATGATTATT+TGG | - | chr5.1:74325781-74325800 | None:intergenic | 20.0% |
| !! | AACAGTGTTAATGATTATTT+GGG | - | chr5.1:74325780-74325799 | None:intergenic | 20.0% |
| !! | AAGATAAACTTGAACTATAT+AGG | - | chr5.1:74324925-74324944 | None:intergenic | 20.0% |
| !! | AGACAAAAAAACAAAATCAA+TGG | - | chr5.1:74326996-74327015 | None:intergenic | 20.0% |
| !! | ATTGATCTGCAATTTATAAT+AGG | + | chr5.1:74327159-74327178 | MS.gene061817:intron | 20.0% |
| !! | TATTCAATGAATTCGAAAAT+TGG | - | chr5.1:74327543-74327562 | None:intergenic | 20.0% |
| !! | TCCTTTATCACAAATAAAAA+AGG | - | chr5.1:74325448-74325467 | None:intergenic | 20.0% |
| !! | TCTACTTTGAATTAGAATAT+CGG | + | chr5.1:74326666-74326685 | MS.gene061817:intron | 20.0% |
| !! | TCTTATTATGTAGAAAATCA+CGG | + | chr5.1:74327661-74327680 | MS.gene061817:intron | 20.0% |
| !! | TTTCTGAACAACAAAAAATA+AGG | - | chr5.1:74326890-74326909 | None:intergenic | 20.0% |
| !!! | ATTGATTTTGTTTTTTTGTC+TGG | + | chr5.1:74326995-74327014 | MS.gene061817:intron | 20.0% |
| !!! | GATTAGTGTAATTTTTTTTC+TGG | + | chr5.1:74325372-74325391 | MS.gene061817:intron | 20.0% |
| !!! | TCCTTTTTTATTTGTGATAA+AGG | + | chr5.1:74325444-74325463 | MS.gene061817:intron | 20.0% |
| !!! | TGTAATAATCTGAAATTCTA+TGG | + | chr5.1:74324675-74324694 | MS.gene061817:intron | 20.0% |
| !!! | TTACTGGTTTGAAATTTTTA+AGG | + | chr5.1:74327757-74327776 | MS.gene061817:intron | 20.0% |
| !!! | TTGATTTTGTTTTTTTGTCT+GGG | + | chr5.1:74326996-74327015 | MS.gene061817:intron | 20.0% |
| !!! | TTTTTTCTTATAATAGTGAC+CGG | + | chr5.1:74327627-74327646 | MS.gene061817:intron | 20.0% |
| ! | AAACTTATTCTACTCAATCA+TGG | + | chr5.1:74326964-74326983 | MS.gene061817:intron | 25.0% |
| ! | AACTTATTCTACTCAATCAT+GGG | + | chr5.1:74326965-74326984 | MS.gene061817:intron | 25.0% |
| ! | AACTTTATCAATTGATGAGA+TGG | + | chr5.1:74327932-74327951 | MS.gene061817:CDS | 25.0% |
| ! | AATCAAATATTAGCAATCAC+AGG | - | chr5.1:74325356-74325375 | None:intergenic | 25.0% |
| ! | AATTATCCAAATCTTACTAC+TGG | - | chr5.1:74328320-74328339 | None:intergenic | 25.0% |
| ! | ATAGTACATTCTTAGGTTTA+TGG | + | chr5.1:74328077-74328096 | MS.gene061817:intron | 25.0% |
| ! | CAAAGTATGTTCTCAAATTA+TGG | + | chr5.1:74327268-74327287 | MS.gene061817:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr5.1:74326584-74326603 | None:intergenic | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr5.1:74326545-74326564 | MS.gene061817:intron | 25.0% |
| ! | CTGTTCACTTATTAATCAAT+TGG | - | chr5.1:74324730-74324749 | None:intergenic | 25.0% |
| ! | GAACAAAATGTATATAGAGT+TGG | - | chr5.1:74325553-74325572 | None:intergenic | 25.0% |
| ! | GATTAACTTCAACAGTAATA+GGG | + | chr5.1:74324603-74324622 | MS.gene061817:intron | 25.0% |
| ! | GTAAATCAATGACATATGTA+TGG | - | chr5.1:74327720-74327739 | None:intergenic | 25.0% |
| ! | TACATATAAACCAGATACAT+CGG | - | chr5.1:74327567-74327586 | None:intergenic | 25.0% |
| ! | TATAAATTGCAGATCAATCA+GGG | - | chr5.1:74327157-74327176 | None:intergenic | 25.0% |
| ! | TGATTAACTTCAACAGTAAT+AGG | + | chr5.1:74324602-74324621 | MS.gene061817:intron | 25.0% |
| ! | TGATTAATAAGTGAACAGAA+TGG | + | chr5.1:74324732-74324751 | MS.gene061817:intron | 25.0% |
| ! | TGTCATCAAACATATTTCAT+GGG | - | chr5.1:74328142-74328161 | None:intergenic | 25.0% |
| ! | TTACATATCAACTTCATTGA+AGG | - | chr5.1:74326397-74326416 | None:intergenic | 25.0% |
| ! | TTATAAATTGCAGATCAATC+AGG | - | chr5.1:74327158-74327177 | None:intergenic | 25.0% |
| ! | TTCACTTATTAATCAATTGG+TGG | - | chr5.1:74324727-74324746 | None:intergenic | 25.0% |
| ! | TTGTCATCAAACATATTTCA+TGG | - | chr5.1:74328143-74328162 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | chr5.1:74326619-74326638 | MS.gene061817:intron | 25.0% |
| !! | GGAATATTTTCACAATATCA+TGG | + | chr5.1:74325010-74325029 | MS.gene061817:intron | 25.0% |
| !! | TGTACTTACTTTGATCTTTT+TGG | + | chr5.1:74327336-74327355 | MS.gene061817:intron | 25.0% |
| !! | TTTTTGCTAATTATAGTGAC+CGG | - | chr5.1:74327519-74327538 | None:intergenic | 25.0% |
| !!! | AATTTTTAAGGTTGGATTGA+AGG | + | chr5.1:74327769-74327788 | MS.gene061817:intron | 25.0% |
| !!! | TAACTTTAGAATTCATGTGA+TGG | - | chr5.1:74325907-74325926 | None:intergenic | 25.0% |
| !!! | TCATTCTTTTTAGGAAAACA+TGG | + | chr5.1:74324521-74324540 | MS.gene061817:intron | 25.0% |
| !!! | TCATTTTGATAAGTTACTAG+TGG | - | chr5.1:74328229-74328248 | None:intergenic | 25.0% |
| !!! | TGGTTTGAAATTTTTAAGGT+TGG | + | chr5.1:74327761-74327780 | MS.gene061817:intron | 25.0% |
| !!! | TTTTGTTGTTCAGAAAAAGT+GGG | + | chr5.1:74326894-74326913 | MS.gene061817:intron | 25.0% |
| !!! | TTTTTGTTGTTCAGAAAAAG+TGG | + | chr5.1:74326893-74326912 | MS.gene061817:intron | 25.0% |
| AATTAGAATATCGGAAACTG+TGG | + | chr5.1:74326675-74326694 | MS.gene061817:intron | 30.0% | |
| ACAAGATAGCAATCATTTCA+AGG | + | chr5.1:74326016-74326035 | MS.gene061817:CDS | 30.0% | |
| ACTCTTACAATATCAAATGG+TGG | + | chr5.1:74327963-74327982 | MS.gene061817:CDS | 30.0% | |
| ATAGAAGAATGACAATCCTT+GGG | + | chr5.1:74325157-74325176 | MS.gene061817:intron | 30.0% | |
| ATCTATTAAACAGTACCTTC+AGG | - | chr5.1:74325860-74325879 | None:intergenic | 30.0% | |
| ATGAAAATCCCTAAATCTTG+AGG | - | chr5.1:74326462-74326481 | None:intergenic | 30.0% | |
| ATTAGAATATCGGAAACTGT+GGG | + | chr5.1:74326676-74326695 | MS.gene061817:intron | 30.0% | |
| ATTGTAAATGCAGTCATTGA+TGG | + | chr5.1:74327392-74327411 | MS.gene061817:CDS | 30.0% | |
| GATAACCTTATTACTATGCA+GGG | + | chr5.1:74324796-74324815 | MS.gene061817:intron | 30.0% | |
| GTAATGTTGTTAAGTTAAGC+AGG | - | chr5.1:74325228-74325247 | None:intergenic | 30.0% | |
| GTCATCAAACATATTTCATG+GGG | - | chr5.1:74328141-74328160 | None:intergenic | 30.0% | |
| TATAGAAGAATGACAATCCT+TGG | + | chr5.1:74325156-74325175 | MS.gene061817:intron | 30.0% | |
| TATGACCATAGAATCATTGA+TGG | + | chr5.1:74328532-74328551 | MS.gene061817:CDS | 30.0% | |
| TATTTGGGAACAAAGAAAAC+TGG | - | chr5.1:74325765-74325784 | None:intergenic | 30.0% | |
| TCAATGACTGCATTTACAAT+TGG | - | chr5.1:74327392-74327411 | None:intergenic | 30.0% | |
| TCTGTTGTAGTTTCAACTTT+AGG | - | chr5.1:74326144-74326163 | None:intergenic | 30.0% | |
| TCTGTTTCAATTTGAGCAAT+TGG | - | chr5.1:74325677-74325696 | None:intergenic | 30.0% | |
| TGATAACCTTATTACTATGC+AGG | + | chr5.1:74324795-74324814 | MS.gene061817:intron | 30.0% | |
| TGCTAAGAAGTCACTTATTA+TGG | + | chr5.1:74328044-74328063 | MS.gene061817:intron | 30.0% | |
| TGCTCAAATTGAAACAGATA+AGG | + | chr5.1:74325679-74325698 | MS.gene061817:CDS | 30.0% | |
| TTAGCAATCACAGGAAAATT+TGG | - | chr5.1:74325347-74325366 | None:intergenic | 30.0% | |
| TTGTAAATGCAGTCATTGAT+GGG | + | chr5.1:74327393-74327412 | MS.gene061817:CDS | 30.0% | |
| ! | AATTGGTGGCAATAAGAATA+AGG | - | chr5.1:74324713-74324732 | None:intergenic | 30.0% |
| ! | AGTTCATTTTATCCGCATTT+CGG | - | chr5.1:74327860-74327879 | None:intergenic | 30.0% |
| ! | ATATCAAATGGTGGTGTTTA+TGG | + | chr5.1:74327972-74327991 | MS.gene061817:CDS | 30.0% |
| ! | CATTAGACGTCATTCTTTTT+AGG | + | chr5.1:74324512-74324531 | MS.gene061817:intron | 30.0% |
| ! | CGTTCATTTTCTTCAGATAA+TGG | + | chr5.1:74324857-74324876 | MS.gene061817:CDS | 30.0% |
| ! | TATGTTTGATGACAAGAAGT+AGG | + | chr5.1:74328148-74328167 | MS.gene061817:intron | 30.0% |
| !! | AATTGTTTCTGTGAAGGATT+TGG | + | chr5.1:74325723-74325742 | MS.gene061817:intron | 30.0% |
| !! | ACATTCAATTGTTTCTGTGA+AGG | + | chr5.1:74325717-74325736 | MS.gene061817:intron | 30.0% |
| !! | CAGTTACTTGTTATTTGTAG+TGG | + | chr5.1:74325574-74325593 | MS.gene061817:intron | 30.0% |
| !! | CTTACTTTGATCTTTTTGGT+AGG | + | chr5.1:74327340-74327359 | MS.gene061817:intron | 30.0% |
| !! | GATCAATGTTTTTGCAAAGA+AGG | + | chr5.1:74327899-74327918 | MS.gene061817:CDS | 30.0% |
| !! | TGGTGCTATACTTATTATAC+TGG | + | chr5.1:74327099-74327118 | MS.gene061817:intron | 30.0% |
| !! | TTTGTTGTTCAGAAAAAGTG+GGG | + | chr5.1:74326895-74326914 | MS.gene061817:intron | 30.0% |
| !!! | GATAACCAAGCTTTTAAGTT+TGG | + | chr5.1:74324445-74324464 | MS.gene061817:CDS | 30.0% |
| AAAACGCATGAAATTCCAGA+TGG | - | chr5.1:74328179-74328198 | None:intergenic | 35.0% | |
| AAAAGCTTGGTTATCATCTG+AGG | - | chr5.1:74324440-74324459 | None:intergenic | 35.0% | |
| AACTGTGGGCATATTTATTG+TGG | + | chr5.1:74326690-74326709 | MS.gene061817:intron | 35.0% | |
| AAGCATCCTTATAATCAGCA+CGG | - | chr5.1:74327202-74327221 | None:intergenic | 35.0% | |
| AATGTCCCTGCATAGTAATA+AGG | - | chr5.1:74324804-74324823 | None:intergenic | 35.0% | |
| AGATAACTGCTCATGTGTTA+TGG | + | chr5.1:74324956-74324975 | MS.gene061817:intron | 35.0% | |
| AGGGAATAGTAAATAAGGGA+AGG | - | chr5.1:74327496-74327515 | None:intergenic | 35.0% | |
| ATATTTCCTATTACACCCTC+AGG | + | chr5.1:74326488-74326507 | MS.gene061817:intron | 35.0% | |
| ATCTGCATACATATGCACTT+GGG | + | chr5.1:74326923-74326942 | MS.gene061817:intron | 35.0% | |
| ATGATTGCTATCTTGTTACC+TGG | - | chr5.1:74326012-74326031 | None:intergenic | 35.0% | |
| ATGTAGAAAATCACGGTGTT+GGG | + | chr5.1:74327668-74327687 | MS.gene061817:intron | 35.0% | |
| ATGTTACTCGACATAAGAAC+TGG | - | chr5.1:74327039-74327058 | None:intergenic | 35.0% | |
| ATTGATATCAGCATAGCTGT+TGG | + | chr5.1:74327440-74327459 | MS.gene061817:CDS | 35.0% | |
| CATAGGAACCTTGAAAATGA+AGG | - | chr5.1:74326307-74326326 | None:intergenic | 35.0% | |
| CATTGAATAACCGATGTATC+TGG | + | chr5.1:74327554-74327573 | MS.gene061817:intron | 35.0% | |
| CTCTTCCATCAATGATTCTA+TGG | - | chr5.1:74328540-74328559 | None:intergenic | 35.0% | |
| CTGGCATTTATGTTGTTCAA+TGG | + | chr5.1:74325391-74325410 | MS.gene061817:intron | 35.0% | |
| CTTACTACTGGTAAGGAAAA+GGG | - | chr5.1:74328308-74328327 | None:intergenic | 35.0% | |
| GGCACTCTTACAATATCAAA+TGG | + | chr5.1:74327960-74327979 | MS.gene061817:CDS | 35.0% | |
| TAATAAGAACTTACTCCCTC+CGG | - | chr5.1:74327649-74327668 | None:intergenic | 35.0% | |
| TAGAATCATTGATGGAAGAG+AGG | + | chr5.1:74328540-74328559 | MS.gene061817:CDS | 35.0% | |
| TAGTAAATAAGGGAAGGTTG+AGG | - | chr5.1:74327490-74327509 | None:intergenic | 35.0% | |
| TATGTAGAAAATCACGGTGT+TGG | + | chr5.1:74327667-74327686 | MS.gene061817:intron | 35.0% | |
| TCAAATTGGGACTTATGTCT+GGG | + | chr5.1:74327240-74327259 | MS.gene061817:CDS | 35.0% | |
| TCAATTGACGTTGTCATTAC+TGG | + | chr5.1:74327741-74327760 | MS.gene061817:intron | 35.0% | |
| TCCAAATCTTACTACTGGTA+AGG | - | chr5.1:74328315-74328334 | None:intergenic | 35.0% | |
| TCCTTACCAGTAGTAAGATT+TGG | + | chr5.1:74328311-74328330 | MS.gene061817:intron | 35.0% | |
| TCGAGTAACATGATAGACAA+GGG | + | chr5.1:74327048-74327067 | MS.gene061817:intron | 35.0% | |
| TCTTACTACTGGTAAGGAAA+AGG | - | chr5.1:74328309-74328328 | None:intergenic | 35.0% | |
| TGCGGATAAAATGAACTTTG+CGG | + | chr5.1:74327863-74327882 | MS.gene061817:CDS | 35.0% | |
| TGCTTATAATAGTGACCTGA+GGG | - | chr5.1:74326506-74326525 | None:intergenic | 35.0% | |
| TGTAAATGCAGTCATTGATG+GGG | + | chr5.1:74327394-74327413 | MS.gene061817:CDS | 35.0% | |
| TGTTACTCGACATAAGAACT+GGG | - | chr5.1:74327038-74327057 | None:intergenic | 35.0% | |
| TTATCAATTGATGAGATGGC+CGG | + | chr5.1:74327936-74327955 | MS.gene061817:CDS | 35.0% | |
| TTCTTATAATAGTGACCGGA+GGG | + | chr5.1:74327631-74327650 | MS.gene061817:intron | 35.0% | |
| TTGCTTATAATAGTGACCTG+AGG | - | chr5.1:74326507-74326526 | None:intergenic | 35.0% | |
| TTTCTTATAATAGTGACCGG+AGG | + | chr5.1:74327630-74327649 | MS.gene061817:intron | 35.0% | |
| ! | AAGTGTATTTCTATCCAGCA+TGG | + | chr5.1:74325133-74325152 | MS.gene061817:intron | 35.0% |
| ! | AATGTCTGCCTTCATTTTCA+AGG | + | chr5.1:74326296-74326315 | MS.gene061817:intron | 35.0% |
| ! | CAGCATAGCAAATGTGTTTT+GGG | - | chr5.1:74326370-74326389 | None:intergenic | 35.0% |
| ! | GAAAAGCATGGAGTCAAATT+GGG | + | chr5.1:74327227-74327246 | MS.gene061817:CDS | 35.0% |
| ! | GAGTATTGCCTCAAGATTTA+GGG | + | chr5.1:74326451-74326470 | MS.gene061817:intron | 35.0% |
| ! | TCAGCATAGCAAATGTGTTT+TGG | - | chr5.1:74326371-74326390 | None:intergenic | 35.0% |
| ! | TGAAAAGCATGGAGTCAAAT+TGG | + | chr5.1:74327226-74327245 | MS.gene061817:CDS | 35.0% |
| ! | TGAGTATTGCCTCAAGATTT+AGG | + | chr5.1:74326450-74326469 | MS.gene061817:intron | 35.0% |
| !! | TTGCTGTTTCTTATTGTCAG+TGG | + | chr5.1:74324764-74324783 | MS.gene061817:intron | 35.0% |
| !! | TTTTCAAGGTTCCTATGACA+AGG | + | chr5.1:74326310-74326329 | MS.gene061817:intron | 35.0% |
| !!! | AACCAAGCTTTTAAGTTTGG+TGG | + | chr5.1:74324448-74324467 | MS.gene061817:CDS | 35.0% |
| !!! | TTGTTTTTTTGTCTGGGTGA+GGG | + | chr5.1:74327002-74327021 | MS.gene061817:intron | 35.0% |
| !!! | TTTGTTTTTTTGTCTGGGTG+AGG | + | chr5.1:74327001-74327020 | MS.gene061817:intron | 35.0% |
| AAAGGGCGGAATATTTGGAT+AGG | - | chr5.1:74328291-74328310 | None:intergenic | 40.0% | |
| AACAGACACACACAAAAGAG+TGG | - | chr5.1:74324653-74324672 | None:intergenic | 40.0% | |
| AAGAGGCTTCCATTCAAACA+TGG | + | chr5.1:74324831-74324850 | MS.gene061817:CDS | 40.0% | |
| AAGGAAAAGGGCGGAATATT+TGG | - | chr5.1:74328296-74328315 | None:intergenic | 40.0% | |
| AATGACAATCCTTGGGAGTT+GGG | + | chr5.1:74325164-74325183 | MS.gene061817:intron | 40.0% | |
| ACCGGAGGGAATAGTAAATA+AGG | - | chr5.1:74327501-74327520 | None:intergenic | 40.0% | |
| ACTCGTCTTTCTCTTTCCTT+AGG | - | chr5.1:74326219-74326238 | None:intergenic | 40.0% | |
| AGAATTCATGTGATGGCTTG+TGG | - | chr5.1:74325900-74325919 | None:intergenic | 40.0% | |
| AGACAATAGCAATGCACCAT+TGG | - | chr5.1:74326776-74326795 | None:intergenic | 40.0% | |
| AGGTGACTGAAGAAAACCTT+CGG | - | chr5.1:74327470-74327489 | None:intergenic | 40.0% | |
| ATACACCTACTATGACGTGT+AGG | - | chr5.1:74326864-74326883 | None:intergenic | 40.0% | |
| CAAATAATGCATACACCCTC+CGG | - | chr5.1:74326641-74326660 | None:intergenic | 40.0% | |
| CACCACCAAACTTAAAAGCT+TGG | - | chr5.1:74324453-74324472 | None:intergenic | 40.0% | |
| CATCTGCATACATATGCACT+TGG | + | chr5.1:74326922-74326941 | MS.gene061817:intron | 40.0% | |
| CCGGAGGGAATAGTAAATAA+GGG | - | chr5.1:74327500-74327519 | None:intergenic | 40.0% | |
| CGAGTAACATGATAGACAAG+GGG | + | chr5.1:74327049-74327068 | MS.gene061817:intron | 40.0% | |
| GATGCTTTCGTTGAAAAGCA+TGG | + | chr5.1:74327215-74327234 | MS.gene061817:CDS | 40.0% | |
| GTCAAATTGGGACTTATGTC+TGG | + | chr5.1:74327239-74327258 | MS.gene061817:CDS | 40.0% | |
| GTCATTCTTCTATACCATGC+TGG | - | chr5.1:74325150-74325169 | None:intergenic | 40.0% | |
| GTCGAGTAACATGATAGACA+AGG | + | chr5.1:74327047-74327066 | MS.gene061817:intron | 40.0% | |
| GTTAGAGCAATGTACATCAG+TGG | - | chr5.1:74328511-74328530 | None:intergenic | 40.0% | |
| GTTTCTGTGAAGGATTTGGA+TGG | + | chr5.1:74325727-74325746 | MS.gene061817:intron | 40.0% | |
| TACTATGACGTGTAGGACTT+GGG | - | chr5.1:74326857-74326876 | None:intergenic | 40.0% | |
| TCAACATTAACCTTGTCACC+AGG | - | chr5.1:74325650-74325669 | None:intergenic | 40.0% | |
| TCTGCATACATATGCACTTG+GGG | + | chr5.1:74326924-74326943 | MS.gene061817:intron | 40.0% | |
| TGAACGCTTCCATGTTTGAA+TGG | - | chr5.1:74324843-74324862 | None:intergenic | 40.0% | |
| TGCTAATTATAGTGACCGGA+GGG | - | chr5.1:74327515-74327534 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr5.1:74326623-74326642 | MS.gene061817:intron | 40.0% | |
| TTGCTAATTATAGTGACCGG+AGG | - | chr5.1:74327516-74327535 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr5.1:74326622-74326641 | MS.gene061817:intron | 40.0% | |
| TTGGAGGAAATGTTGTTCCA+AGG | + | chr5.1:74328485-74328504 | MS.gene061817:CDS | 40.0% | |
| TTGTTCAGAAAAAGTGGGGA+TGG | + | chr5.1:74326899-74326918 | MS.gene061817:intron | 40.0% | |
| TTTGCAAAGAAGGCTAATGC+TGG | + | chr5.1:74327909-74327928 | MS.gene061817:CDS | 40.0% | |
| ! | AATGGTGCATTGCTATTGTC+TGG | + | chr5.1:74326775-74326794 | MS.gene061817:intron | 40.0% |
| ! | ATAGCAATGCACCATTGGTT+TGG | - | chr5.1:74326771-74326790 | None:intergenic | 40.0% |
| ! | ATGGCTTGTGGGAGTAAAAA+TGG | - | chr5.1:74325888-74325907 | None:intergenic | 40.0% |
| ! | CAGGGACATTTTTCATCAAG+AGG | + | chr5.1:74324814-74324833 | MS.gene061817:intron | 40.0% |
| ! | CCCTTATTTACTATTCCCTC+CGG | + | chr5.1:74327497-74327516 | MS.gene061817:intron | 40.0% |
| ! | GAATTCATGTGATGGCTTGT+GGG | - | chr5.1:74325899-74325918 | None:intergenic | 40.0% |
| ! | GTTTTCCTTGCTGCTGTATT+AGG | + | chr5.1:74325797-74325816 | MS.gene061817:intron | 40.0% |
| !! | AGGCAGTGTTCTTTTTGAGA+CGG | + | chr5.1:74328560-74328579 | MS.gene061817:CDS | 40.0% |
| !! | GTGGTGTTACAGTGTTAGTA+GGG | + | chr5.1:74324467-74324486 | MS.gene061817:intron | 40.0% |
| !! | TGATATTGTAAGAGTGCCTC+CGG | - | chr5.1:74327958-74327977 | None:intergenic | 40.0% |
| !! | TGGTGTTACAGTGTTAGTAG+GGG | + | chr5.1:74324468-74324487 | MS.gene061817:intron | 40.0% |
| !!! | TGTTTTGATGTATGGGAGCA+GGG | + | chr5.1:74325624-74325643 | MS.gene061817:intron | 40.0% |
| !!! | TTGTTTTGATGTATGGGAGC+AGG | + | chr5.1:74325623-74325642 | MS.gene061817:intron | 40.0% |
| !!! | TTTTTTTGCTTGCCTACCCA+GGG | + | chr5.1:74327816-74327835 | MS.gene061817:intron | 40.0% |
| !!! | TTTTTTTTGCTTGCCTACCC+AGG | + | chr5.1:74327815-74327834 | MS.gene061817:intron | 40.0% |
| AACATTTCCTCCAACAACCG+CGG | - | chr5.1:74328479-74328498 | None:intergenic | 45.0% | |
| AAGAAGTAGGACGAACCATC+TGG | + | chr5.1:74328161-74328180 | MS.gene061817:intron | 45.0% | |
| ACTACTGGTAAGGAAAAGGG+CGG | - | chr5.1:74328305-74328324 | None:intergenic | 45.0% | |
| AGAACATGCAAACCTGAGGT+GGG | - | chr5.1:74328025-74328044 | None:intergenic | 45.0% | |
| AGGTTCCTATGACAAGGCTT+CGG | + | chr5.1:74326316-74326335 | MS.gene061817:intron | 45.0% | |
| AGTTACTAGTGGCATGCATC+TGG | - | chr5.1:74328218-74328237 | None:intergenic | 45.0% | |
| CAAGTCCTACACGTCATAGT+AGG | + | chr5.1:74326856-74326875 | MS.gene061817:intron | 45.0% | |
| CGTCTTTCTCTTTCCTTAGG+AGG | - | chr5.1:74326216-74326235 | None:intergenic | 45.0% | |
| CTACTATGACGTGTAGGACT+TGG | - | chr5.1:74326858-74326877 | None:intergenic | 45.0% | |
| CTATGACAAGGCTTCGGAAA+CGG | + | chr5.1:74326322-74326341 | MS.gene061817:CDS | 45.0% | |
| GAATGACAATCCTTGGGAGT+TGG | + | chr5.1:74325163-74325182 | MS.gene061817:intron | 45.0% | |
| TAGCAGAACATGCAAACCTG+AGG | - | chr5.1:74328029-74328048 | None:intergenic | 45.0% | |
| TATGACAAGGCTTCGGAAAC+GGG | + | chr5.1:74326323-74326342 | MS.gene061817:CDS | 45.0% | |
| TGATGTTGTTGTCCCTCCAT+TGG | + | chr5.1:74325476-74325495 | MS.gene061817:CDS | 45.0% | |
| TGCAGCTTCTAGCCAATGAA+GGG | + | chr5.1:74325974-74325993 | MS.gene061817:intron | 45.0% | |
| TGTCACCTAATACAGCAGCA+AGG | - | chr5.1:74325805-74325824 | None:intergenic | 45.0% | |
| TTAGGAGCTTTCTTCTCCTC+CGG | - | chr5.1:74326126-74326145 | None:intergenic | 45.0% | |
| TTATCCGCATTTCGGATGAC+AGG | - | chr5.1:74327852-74327871 | None:intergenic | 45.0% | |
| ! | TACAGTGTTAGTAGGGGCAT+TGG | + | chr5.1:74324474-74324493 | MS.gene061817:intron | 45.0% |
| ! | TAGTGACCTGAGGGTGTAAT+AGG | - | chr5.1:74326497-74326516 | None:intergenic | 45.0% |
| ! | TTTTGGCAGTCGGCAATCTT+GGG | + | chr5.1:74328430-74328449 | MS.gene061817:intron | 45.0% |
| !! | ACCTGAGGTGGGTTGATAAT+AGG | - | chr5.1:74328014-74328033 | None:intergenic | 45.0% |
| !! | CCTGAGGTGGGTTGATAATA+GGG | - | chr5.1:74328013-74328032 | None:intergenic | 45.0% |
| !! | CTGAGGTGGGTTGATAATAG+GGG | - | chr5.1:74328012-74328031 | None:intergenic | 45.0% |
| !! | GAAGCTCCGTGCTGATTATA+AGG | + | chr5.1:74327193-74327212 | MS.gene061817:CDS | 45.0% |
| !! | GGTGGTGTTACAGTGTTAGT+AGG | + | chr5.1:74324466-74324485 | MS.gene061817:intron | 45.0% |
| !! | TTTTTGGCAGTCGGCAATCT+TGG | + | chr5.1:74328429-74328448 | MS.gene061817:intron | 45.0% |
| ACACACAAAAGAGTGGACGC+AGG | - | chr5.1:74324646-74324665 | None:intergenic | 50.0% | |
| ACATTTCCTCCAACAACCGC+GGG | - | chr5.1:74328478-74328497 | None:intergenic | 50.0% | |
| ACGGATCAAAGATACCGTGG+AGG | + | chr5.1:74328579-74328598 | MS.gene061817:CDS | 50.0% | |
| AGTCTCAGATGGTGCAACGT+GGG | - | chr5.1:74326058-74326077 | None:intergenic | 50.0% | |
| ATCACACCTGACTCAGGACT+TGG | - | chr5.1:74325837-74325856 | None:intergenic | 50.0% | |
| ATCCTTGGGAGTTGGGTGAT+TGG | + | chr5.1:74325171-74325190 | MS.gene061817:intron | 50.0% | |
| CAGAACATGCAAACCTGAGG+TGG | - | chr5.1:74328026-74328045 | None:intergenic | 50.0% | |
| CATAGCTGTTGGAACTCCGA+AGG | + | chr5.1:74327451-74327470 | MS.gene061817:CDS | 50.0% | |
| CCCTATTATCAACCCACCTC+AGG | + | chr5.1:74328010-74328029 | MS.gene061817:CDS | 50.0% | |
| CGCAACAGTATCCCCTTCAT+TGG | - | chr5.1:74325989-74326008 | None:intergenic | 50.0% | |
| CTTTCCTTAGGAGGAAGCTG+TGG | - | chr5.1:74326207-74326226 | None:intergenic | 50.0% | |
| CTTTGTGGAGCAGGTGCTTT+AGG | - | chr5.1:74326171-74326190 | None:intergenic | 50.0% | |
| GAGACGGATCAAAGATACCG+TGG | + | chr5.1:74328576-74328595 | MS.gene061817:CDS | 50.0% | |
| GATGTTCCAAGTCCTGAGTC+AGG | + | chr5.1:74325828-74325847 | MS.gene061817:CDS | 50.0% | |
| GCAATGTACATCAGTGGCCT+TGG | - | chr5.1:74328505-74328524 | None:intergenic | 50.0% | |
| GCAGCTTCTAGCCAATGAAG+GGG | + | chr5.1:74325975-74325994 | MS.gene061817:intron | 50.0% | |
| GTGCAGCTTCTAGCCAATGA+AGG | + | chr5.1:74325973-74325992 | MS.gene061817:intron | 50.0% | |
| GTTTGGCAGGCGCATCATAT+GGG | - | chr5.1:74326754-74326773 | None:intergenic | 50.0% | |
| TCAATTGATGAGATGGCCGG+AGG | + | chr5.1:74327939-74327958 | MS.gene061817:CDS | 50.0% | |
| TGAGTCAGGTGTGATCCTGA+AGG | + | chr5.1:74325842-74325861 | MS.gene061817:CDS | 50.0% | |
| TGGCTGAATCCATCGAGGAT+GGG | + | chr5.1:74325496-74325515 | MS.gene061817:CDS | 50.0% | |
| TGTGCCTGTCATCCGAAATG+CGG | + | chr5.1:74327845-74327864 | MS.gene061817:CDS | 50.0% | |
| TTCAGGATCACACCTGACTC+AGG | - | chr5.1:74325843-74325862 | None:intergenic | 50.0% | |
| TTCTCAGGTGCAGTCTCAGA+TGG | - | chr5.1:74326069-74326088 | None:intergenic | 50.0% | |
| TTGGCTGAATCCATCGAGGA+TGG | + | chr5.1:74325495-74325514 | MS.gene061817:CDS | 50.0% | |
| ! | CGATGGATTCAGCCAATGGA+GGG | - | chr5.1:74325491-74325510 | None:intergenic | 50.0% |
| ! | CGTTTCCGAAGCCTTGTCAT+AGG | - | chr5.1:74326324-74326343 | None:intergenic | 50.0% |
| ! | TCCATTGGCTGAATCCATCG+AGG | + | chr5.1:74325491-74325510 | MS.gene061817:CDS | 50.0% |
| ! | TCCTCGATGGATTCAGCCAA+TGG | - | chr5.1:74325495-74325514 | None:intergenic | 50.0% |
| ! | TCGATGGATTCAGCCAATGG+AGG | - | chr5.1:74325492-74325511 | None:intergenic | 50.0% |
| !! | CAATGCACCATTGGTTTGGC+AGG | - | chr5.1:74326767-74326786 | None:intergenic | 50.0% |
| !! | TTCGGAAACGGGTTGCTCAA+CGG | + | chr5.1:74326334-74326353 | MS.gene061817:CDS | 50.0% |
| ATGTCGAGCAAAAGCCTGCG+AGG | - | chr5.1:74328607-74328626 | None:intergenic | 55.0% | |
| CAGTCTCAGATGGTGCAACG+TGG | - | chr5.1:74326059-74326078 | None:intergenic | 55.0% | |
| GACAGGCACAACAAGTCCCT+GGG | - | chr5.1:74327835-74327854 | None:intergenic | 55.0% | |
| GACCAATCACCCAACTCCCA+AGG | - | chr5.1:74325176-74325195 | None:intergenic | 55.0% | |
| GGCTCAGTTGGAGAGCTTTG+TGG | - | chr5.1:74326186-74326205 | None:intergenic | 55.0% | |
| GGCTTAGGAGCAGGTTTCTC+AGG | - | chr5.1:74326084-74326103 | None:intergenic | 55.0% | |
| GGTTTGGCAGGCGCATCATA+TGG | - | chr5.1:74326755-74326774 | None:intergenic | 55.0% | |
| TGACAGGCACAACAAGTCCC+TGG | - | chr5.1:74327836-74327855 | None:intergenic | 55.0% | |
| TGAGCCACAGCTTCCTCCTA+AGG | + | chr5.1:74326200-74326219 | MS.gene061817:CDS | 55.0% | |
| TGATGCGCCTGCCAAACCAA+TGG | + | chr5.1:74326757-74326776 | MS.gene061817:intron | 55.0% | |
| TGCTAGAGTCCCATCCTCGA+TGG | - | chr5.1:74325508-74325527 | None:intergenic | 55.0% | |
| TGTCGAGCAAAAGCCTGCGA+GGG | - | chr5.1:74328606-74328625 | None:intergenic | 55.0% | |
| TTCAATTGTGAGCCGTCCCG+CGG | + | chr5.1:74328459-74328478 | MS.gene061817:CDS | 55.0% | |
| ! | ACGGGTTGCTCAACGGTTGA+AGG | + | chr5.1:74326341-74326360 | MS.gene061817:CDS | 55.0% |
| ! | GTTGGAGAGCTTTGTGGAGC+AGG | - | chr5.1:74326180-74326199 | None:intergenic | 55.0% |
| AGCCCCAAAGGCTAGTGAGC+CGG | + | chr5.1:74326104-74326123 | MS.gene061817:CDS | 60.0% | |
| GAAGGGGATACTGTTGCGCC+AGG | + | chr5.1:74325991-74326010 | MS.gene061817:CDS | 60.0% | |
| GGAGGAAGCTGTGGCTCAGT+TGG | - | chr5.1:74326198-74326217 | None:intergenic | 60.0% | |
| GGCACAACAAGTCCCTGGGT+AGG | - | chr5.1:74327831-74327850 | None:intergenic | 60.0% | |
| TGATGTATGGGAGCAGGGCC+TGG | + | chr5.1:74325629-74325648 | MS.gene061817:intron | 60.0% | |
| TGCTCCTAAGCCAGCCCCAA+AGG | + | chr5.1:74326092-74326111 | MS.gene061817:CDS | 60.0% | |
| TTCCTCCAACAACCGCGGGA+CGG | - | chr5.1:74328474-74328493 | None:intergenic | 60.0% | |
| !! | CCTCCGGCTCACTAGCCTTT+GGG | - | chr5.1:74326110-74326129 | None:intergenic | 60.0% |
| !! | CTAGCCTTTGGGGCTGGCTT+AGG | - | chr5.1:74326099-74326118 | None:intergenic | 60.0% |
| !! | CTCCGGCTCACTAGCCTTTG+GGG | - | chr5.1:74326109-74326128 | None:intergenic | 60.0% |
| !! | TCCTCCGGCTCACTAGCCTT+TGG | - | chr5.1:74326111-74326130 | None:intergenic | 60.0% |
| !! | TTTGGGGCTGGCTTAGGAGC+AGG | - | chr5.1:74326093-74326112 | None:intergenic | 60.0% |
| AAGCCTGCGAGGGTCCTCCA+CGG | - | chr5.1:74328596-74328615 | None:intergenic | 65.0% | |
| ATACCGTGGAGGACCCTCGC+AGG | + | chr5.1:74328590-74328609 | MS.gene061817:CDS | 65.0% | |
| CCCAAAGGCTAGTGAGCCGG+AGG | + | chr5.1:74326107-74326126 | MS.gene061817:CDS | 65.0% | |
| !! | GGCTCACTAGCCTTTGGGGC+TGG | - | chr5.1:74326105-74326124 | None:intergenic | 65.0% |
| AGCCGTCCCGCGGTTGTTGG+AGG | + | chr5.1:74328469-74328488 | MS.gene061817:CDS | 70.0% | |
| GGGAGCAGGGCCTGGTGACA+AGG | + | chr5.1:74325637-74325656 | MS.gene061817:intron | 70.0% | |
| GTGAGCCGTCCCGCGGTTGT+TGG | + | chr5.1:74328466-74328485 | MS.gene061817:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 74324427 | 74328630 | 74324427 | ID=MS.gene061817 |
| chr5.1 | mRNA | 74324427 | 74328630 | 74324427 | ID=MS.gene061817.t1;Parent=MS.gene061817 |
| chr5.1 | exon | 74324427 | 74324479 | 74324427 | ID=MS.gene061817.t1.exon1;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74324427 | 74324479 | 74324427 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74324817 | 74324878 | 74324817 | ID=MS.gene061817.t1.exon2;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74324817 | 74324878 | 74324817 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74325466 | 74325540 | 74325466 | ID=MS.gene061817.t1.exon3;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74325466 | 74325540 | 74325466 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74325645 | 74325700 | 74325645 | ID=MS.gene061817.t1.exon4;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74325645 | 74325700 | 74325645 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74325819 | 74325863 | 74325819 | ID=MS.gene061817.t1.exon5;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74325819 | 74325863 | 74325819 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74325979 | 74326236 | 74325979 | ID=MS.gene061817.t1.exon6;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74325979 | 74326236 | 74325979 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74326318 | 74326412 | 74326318 | ID=MS.gene061817.t1.exon7;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74326318 | 74326412 | 74326318 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74327181 | 74327271 | 74327181 | ID=MS.gene061817.t1.exon8;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74327181 | 74327271 | 74327181 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74327362 | 74327472 | 74327362 | ID=MS.gene061817.t1.exon9;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74327362 | 74327472 | 74327362 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74327837 | 74328031 | 74327837 | ID=MS.gene061817.t1.exon10;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74327837 | 74328031 | 74327837 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| chr5.1 | exon | 74328439 | 74328630 | 74328439 | ID=MS.gene061817.t1.exon11;Parent=MS.gene061817.t1 |
| chr5.1 | CDS | 74328439 | 74328630 | 74328439 | ID=cds.MS.gene061817.t1;Parent=MS.gene061817.t1 |
| Gene Sequence |
| Protein sequence |
