Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035365.t1 | XP_013458264.1 | 93.8 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 3.80E-262 | 913.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035365.t1 | Q9M7Z1 | 60.2 | 457 | 147 | 3 | 49 | 505 | 62 | 483 | 2.6e-150 | 533.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035365.t1 | A0A072V2G4 | 93.8 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 2.7e-262 | 913.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035365 | MS.gene072037 | PPI |
| MS.gene80759 | MS.gene035365 | PPI |
| MS.gene035365 | MS.gene073516 | PPI |
| MS.gene035365 | MS.gene63889 | PPI |
| MS.gene035365 | MS.gene00641 | PPI |
| MS.gene035365 | MS.gene047179 | PPI |
| MS.gene035365 | MS.gene48056 | PPI |
| MS.gene035365 | MS.gene065539 | PPI |
| MS.gene035365 | MS.gene020723 | PPI |
| MS.gene035365 | MS.gene002068 | PPI |
| MS.gene035365 | MS.gene73491 | PPI |
| MS.gene037762 | MS.gene035365 | PPI |
| MS.gene035365 | MS.gene020722 | PPI |
| MS.gene035365 | MS.gene81790 | PPI |
| MS.gene035365 | MS.gene81379 | PPI |
| MS.gene035365 | MS.gene061817 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035365.t1 | MTR_4g120220 | 93.846 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 0.0 | 998 |
| MS.gene035365.t1 | MTR_8g018770 | 26.509 | 464 | 294 | 15 | 56 | 502 | 110 | 543 | 2.42e-36 | 142 |
| MS.gene035365.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 79 | 488 | 225 | 619 | 2.96e-32 | 130 |
| MS.gene035365.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 79 | 488 | 217 | 611 | 3.32e-32 | 130 |
| MS.gene035365.t1 | MTR_1g111140 | 28.538 | 431 | 286 | 8 | 74 | 502 | 60 | 470 | 7.96e-30 | 122 |
| MS.gene035365.t1 | MTR_1g096240 | 25.664 | 452 | 271 | 8 | 74 | 502 | 48 | 457 | 4.37e-25 | 108 |
| MS.gene035365.t1 | MTR_5g093300 | 32.367 | 207 | 133 | 4 | 299 | 504 | 255 | 455 | 8.09e-23 | 101 |
| MS.gene035365.t1 | MTR_2g006820 | 32.367 | 207 | 133 | 4 | 299 | 504 | 253 | 453 | 9.07e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035365.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 49 | 505 | 62 | 483 | 0.0 | 550 |
| MS.gene035365.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 49 | 505 | 62 | 483 | 0.0 | 550 |
| MS.gene035365.t1 | AT3G13930 | 27.721 | 487 | 290 | 20 | 38 | 502 | 93 | 539 | 5.56e-37 | 143 |
| MS.gene035365.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 56 | 502 | 107 | 539 | 8.38e-37 | 143 |
| MS.gene035365.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 56 | 502 | 107 | 539 | 8.38e-37 | 143 |
| MS.gene035365.t1 | AT3G25860 | 27.273 | 429 | 297 | 7 | 74 | 502 | 67 | 480 | 1.51e-31 | 127 |
| MS.gene035365.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 50 | 502 | 201 | 637 | 8.29e-31 | 126 |
| MS.gene035365.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 50 | 502 | 277 | 713 | 9.94e-31 | 127 |
| MS.gene035365.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 166 | 365 | 2.01e-22 | 99.4 |
| MS.gene035365.t1 | AT1G34430 | 24.945 | 457 | 273 | 10 | 74 | 502 | 51 | 465 | 5.20e-22 | 99.4 |
| MS.gene035365.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 264 | 463 | 6.28e-22 | 99.0 |
| MS.gene035365.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 265 | 464 | 6.50e-22 | 99.0 |
| MS.gene035365.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 303 | 504 | 265 | 464 | 1.06e-21 | 98.2 |
| MS.gene035365.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 303 | 504 | 265 | 464 | 1.06e-21 | 98.2 |
Find 0 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTTAGAAATTAGTA+GGG | + | 32568:8702-8721 | MS.gene035365:intron | 10.0% |
| !! | TTATAAATTTAGAAATTAGT+AGG | + | 32568:8701-8720 | MS.gene035365:intron | 10.0% |
| !!! | AAAATATTCTTTAAAAATCA+TGG | + | 32568:10723-10742 | MS.gene035365:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | + | 32568:10013-10032 | MS.gene035365:intron | 10.0% |
| !!! | AATGATTTATTATGTTATTT+TGG | + | 32568:8489-8508 | MS.gene035365:intron | 10.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | - | 32568:9357-9376 | None:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | - | 32568:10068-10087 | None:intergenic | 15.0% |
| !! | CCTATTTATACTTATAATTT+GGG | - | 32568:9180-9199 | None:intergenic | 15.0% |
| !! | TCCTATTTATACTTATAATT+TGG | - | 32568:9181-9200 | None:intergenic | 15.0% |
| !!! | ATTTATTATGTTATTTTGGT+AGG | + | 32568:8493-8512 | MS.gene035365:intron | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | - | 32568:11444-11463 | None:intergenic | 15.0% |
| !!! | TTTATTATGTTATTTTGGTA+GGG | + | 32568:8494-8513 | MS.gene035365:intron | 15.0% |
| !! | ATCACAATATAAATTTGACA+CGG | + | 32568:10951-10970 | MS.gene035365:intron | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | + | 32568:9747-9766 | MS.gene035365:CDS | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | + | 32568:10500-10519 | MS.gene035365:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | + | 32568:11540-11559 | MS.gene035365:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | - | 32568:9358-9377 | None:intergenic | 20.0% |
| !! | CCCAAATTATAAGTATAAAT+AGG | + | 32568:9177-9196 | MS.gene035365:intron | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | - | 32568:10498-10517 | None:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | + | 32568:10226-10245 | MS.gene035365:intron | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | - | 32568:10095-10114 | None:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | + | 32568:11465-11484 | MS.gene035365:intron | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | - | 32568:10951-10970 | None:intergenic | 20.0% |
| !! | TGTTTATATGGCATTTATTT+GGG | + | 32568:8966-8985 | MS.gene035365:intron | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | - | 32568:10903-10922 | None:intergenic | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | + | 32568:11541-11560 | MS.gene035365:intron | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | + | 32568:9309-9328 | MS.gene035365:intron | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | + | 32568:9310-9329 | MS.gene035365:intron | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | + | 32568:10833-10852 | MS.gene035365:intron | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | - | 32568:11045-11064 | None:intergenic | 20.0% |
| !!! | GTATTTTTAAACATGTTTGA+GGG | + | 32568:8803-8822 | MS.gene035365:intron | 20.0% |
| !!! | TGTATTTTTAAACATGTTTG+AGG | + | 32568:8802-8821 | MS.gene035365:intron | 20.0% |
| !!! | TTATACTTATAATTTGGGTT+TGG | - | 32568:9175-9194 | None:intergenic | 20.0% |
| !!! | TTATTATGTTATTTTGGTAG+GGG | + | 32568:8495-8514 | MS.gene035365:intron | 20.0% |
| !!! | TTTAATTTGAAGCATGTTAA+GGG | + | 32568:8268-8287 | MS.gene035365:CDS | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | + | 32568:10909-10928 | MS.gene035365:intron | 20.0% |
| ! | AAAACCATAAATAACCATAC+AGG | - | 32568:11126-11145 | None:intergenic | 25.0% |
| ! | AAAGTTTCTAATATTCTGCA+TGG | + | 32568:8599-8618 | MS.gene035365:CDS | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | + | 32568:10274-10293 | MS.gene035365:intron | 25.0% |
| ! | AATAGGAATAATTGTTGAGA+AGG | + | 32568:9194-9213 | MS.gene035365:intron | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | - | 32568:9307-9326 | None:intergenic | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | - | 32568:10815-10834 | None:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | + | 32568:9951-9970 | MS.gene035365:intron | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | + | 32568:9587-9606 | MS.gene035365:CDS | 25.0% |
| ! | ATTTGATGGAAATAATGCAT+TGG | - | 32568:9293-9312 | None:intergenic | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | - | 32568:10101-10120 | None:intergenic | 25.0% |
| ! | GATATGAAATTTCATTCTGT+CGG | + | 32568:8645-8664 | MS.gene035365:intron | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | - | 32568:10494-10513 | None:intergenic | 25.0% |
| ! | GTGTTTATATGGCATTTATT+TGG | + | 32568:8965-8984 | MS.gene035365:intron | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | + | 32568:10675-10694 | MS.gene035365:intron | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | - | 32568:10151-10170 | None:intergenic | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | + | 32568:10728-10747 | MS.gene035365:intron | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | + | 32568:10663-10682 | MS.gene035365:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | + | 32568:10320-10339 | MS.gene035365:intron | 25.0% |
| !! | TTAATAGCAGTGTTGTTAAA+TGG | + | 32568:8835-8854 | MS.gene035365:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | + | 32568:10319-10338 | MS.gene035365:intron | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | + | 32568:10151-10170 | MS.gene035365:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | - | 32568:9795-9814 | None:intergenic | 25.0% |
| !!! | GTTTAATTTGAAGCATGTTA+AGG | + | 32568:8267-8286 | MS.gene035365:intron | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | - | 32568:9796-9815 | None:intergenic | 25.0% |
| !!! | TATTATGTTATTTTGGTAGG+GGG | + | 32568:8496-8515 | MS.gene035365:intron | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | - | 32568:9951-9970 | None:intergenic | 25.0% |
| AAATTTCATTCTGTCGGTAA+TGG | + | 32568:8651-8670 | MS.gene035365:intron | 30.0% | |
| AAGAACCTAGATTCTGATAT+TGG | + | 32568:9500-9519 | MS.gene035365:CDS | 30.0% | |
| AATAATTGTTGAGAAGGAGA+GGG | + | 32568:9200-9219 | MS.gene035365:intron | 30.0% | |
| AATTAGTAGGGTACATACAT+TGG | + | 32568:8714-8733 | MS.gene035365:intron | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | + | 32568:11236-11255 | MS.gene035365:CDS | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | - | 32568:11504-11523 | None:intergenic | 30.0% | |
| AGTTAAAATCTTGTCATGGA+TGG | + | 32568:9955-9974 | MS.gene035365:intron | 30.0% | |
| ATCAGCAATACTACTTAAGA+GGG | + | 32568:8997-9016 | MS.gene035365:intron | 30.0% | |
| CAATATAAATTTGACACGGT+AGG | + | 32568:10955-10974 | MS.gene035365:intron | 30.0% | |
| CCTGAAAATGAGTTTATAAG+TGG | + | 32568:9103-9122 | MS.gene035365:intron | 30.0% | |
| CGTCTACATAATGAAAATGT+GGG | - | 32568:10392-10411 | None:intergenic | 30.0% | |
| CTAACTCAACATTACAAAAC+CGG | - | 32568:9151-9170 | None:intergenic | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | + | 32568:9506-9525 | MS.gene035365:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | - | 32568:10152-10171 | None:intergenic | 30.0% | |
| GCAGACTCATTAACAAATAT+CGG | - | 32568:9443-9462 | None:intergenic | 30.0% | |
| GGTATTATTCAGTAAGACAA+TGG | + | 32568:8672-8691 | MS.gene035365:intron | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | + | 32568:9507-9526 | MS.gene035365:CDS | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | - | 32568:10393-10412 | None:intergenic | 30.0% | |
| TCTTGGATCTCAAATATCTA+GGG | + | 32568:9238-9257 | MS.gene035365:intron | 30.0% | |
| TTAAACATGTTTGAGGGAAT+GGG | + | 32568:8809-8828 | MS.gene035365:intron | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | - | 32568:10644-10663 | None:intergenic | 30.0% | |
| TTTAAACATGTTTGAGGGAA+TGG | + | 32568:8808-8827 | MS.gene035365:intron | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | - | 32568:9106-9125 | None:intergenic | 30.0% |
| ! | CTTTACTAAGTCTTATGAGA+AGG | + | 32568:10150-10169 | MS.gene035365:intron | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | + | 32568:10321-10340 | MS.gene035365:intron | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | + | 32568:10152-10171 | MS.gene035365:intron | 30.0% |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | + | 32568:9322-9341 | MS.gene035365:intron | 30.0% |
| !! | GTTAATTTGCATACATGACA+AGG | - | 32568:10793-10812 | None:intergenic | 30.0% |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | + | 32568:9648-9667 | MS.gene035365:CDS | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | - | 32568:9794-9813 | None:intergenic | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | + | 32568:11601-11620 | MS.gene035365:intron | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | + | 32568:9326-9345 | MS.gene035365:intron | 30.0% |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | + | 32568:11591-11610 | MS.gene035365:intron | 30.0% |
| AAATCATGGTGAGGTTAAAC+AGG | + | 32568:10737-10756 | MS.gene035365:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | - | 32568:9431-9450 | None:intergenic | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | + | 32568:10970-10989 | MS.gene035365:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | + | 32568:11199-11218 | MS.gene035365:CDS | 35.0% | |
| AGATAGGCCGAATATGATAA+GGG | - | 32568:9935-9954 | None:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | - | 32568:10258-10277 | None:intergenic | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | + | 32568:9593-9612 | MS.gene035365:CDS | 35.0% | |
| ATAATTGTTGAGAAGGAGAG+GGG | + | 32568:9201-9220 | MS.gene035365:intron | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | + | 32568:11119-11138 | MS.gene035365:intron | 35.0% | |
| CAGAATGTGAACTTCTCAAA+TGG | + | 32568:8377-8396 | MS.gene035365:CDS | 35.0% | |
| CATCAGCAATACTACTTAAG+AGG | + | 32568:8996-9015 | MS.gene035365:intron | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | + | 32568:9505-9524 | MS.gene035365:CDS | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | - | 32568:9508-9527 | None:intergenic | 35.0% | |
| CTCTTAAGTAGTATTGCTGA+TGG | - | 32568:8998-9017 | None:intergenic | 35.0% | |
| CTTCTGATACTTTCTCTTCT+GGG | + | 32568:8082-8101 | MS.gene035365:CDS | 35.0% | |
| CTTGGATCTCAAATATCTAG+GGG | + | 32568:9239-9258 | MS.gene035365:intron | 35.0% | |
| GAATAATTGTTGAGAAGGAG+AGG | + | 32568:9199-9218 | MS.gene035365:intron | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | + | 32568:10985-11004 | MS.gene035365:intron | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | + | 32568:11508-11527 | MS.gene035365:intron | 35.0% | |
| GATGGTAAAATCAATGTCTC+TGG | + | 32568:10356-10375 | MS.gene035365:CDS | 35.0% | |
| GCCACAATGATGTGTTTATA+TGG | + | 32568:8954-8973 | MS.gene035365:intron | 35.0% | |
| GCCATATAAACACATCATTG+TGG | - | 32568:8958-8977 | None:intergenic | 35.0% | |
| GTCTTGGATCTCAAATATCT+AGG | + | 32568:9237-9256 | MS.gene035365:intron | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | + | 32568:9958-9977 | MS.gene035365:intron | 35.0% | |
| TAAATATGATAGGCCTTCTG+AGG | + | 32568:9757-9776 | MS.gene035365:CDS | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | - | 32568:9936-9955 | None:intergenic | 35.0% | |
| TCTCAAATGGTATGTTCAAG+AGG | + | 32568:8390-8409 | MS.gene035365:CDS | 35.0% | |
| TGAAGTCATTCTCAAAGGTT+TGG | + | 32568:10572-10591 | MS.gene035365:intron | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | + | 32568:11056-11075 | MS.gene035365:CDS | 35.0% | |
| TTAAGTAGTATTGCTGATGG+CGG | - | 32568:8995-9014 | None:intergenic | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | + | 32568:11209-11228 | MS.gene035365:CDS | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | - | 32568:10139-10158 | None:intergenic | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | - | 32568:11501-11520 | None:intergenic | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | + | 32568:11245-11264 | MS.gene035365:CDS | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | - | 32568:11073-11092 | None:intergenic | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | + | 32568:10567-10586 | MS.gene035365:CDS | 35.0% |
| ! | GTTTGGTTCGTCTACATAAT+TGG | + | 32568:10589-10608 | MS.gene035365:intron | 35.0% |
| ! | TACATGAATTTGAAGCCACT+CGG | + | 32568:9814-9833 | MS.gene035365:intron | 35.0% |
| ! | TTGATTTTACCATCGCTCTT+TGG | - | 32568:10350-10369 | None:intergenic | 35.0% |
| ! | TTTTTCTGCTCAACCTGTTT+TGG | + | 32568:8297-8316 | MS.gene035365:CDS | 35.0% |
| !! | CGGTTTTGTAATGTTGAGTT+AGG | + | 32568:9149-9168 | MS.gene035365:intron | 35.0% |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | + | 32568:9647-9666 | MS.gene035365:CDS | 35.0% |
| !! | CTTAAGAGGGTTAGTTAGTT+AGG | + | 32568:9010-9029 | MS.gene035365:intron | 35.0% |
| AAACACATCATTGTGGCCTA+TGG | - | 32568:8951-8970 | None:intergenic | 40.0% | |
| AAATGCAACACGAGTAACTC+TGG | - | 32568:11700-11719 | None:intergenic | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | - | 32568:11321-11340 | None:intergenic | 40.0% | |
| AAGTATCAGAAGCAGAGAGA+CGG | - | 32568:8074-8093 | None:intergenic | 40.0% | |
| ACACAACATTGGAATTGCGA+TGG | + | 32568:10996-11015 | MS.gene035365:CDS | 40.0% | |
| ACTCACATCTATGCGAGAAT+TGG | - | 32568:8160-8179 | None:intergenic | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | + | 32568:11159-11178 | MS.gene035365:intron | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | + | 32568:11248-11267 | MS.gene035365:CDS | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | - | 32568:10294-10313 | None:intergenic | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | + | 32568:11109-11128 | MS.gene035365:intron | 40.0% | |
| ATCCCTTCACAAATTGCCTA+TGG | - | 32568:8912-8931 | None:intergenic | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | - | 32568:11302-11321 | None:intergenic | 40.0% | |
| CACCATAGGCAATTTGTGAA+GGG | + | 32568:8907-8926 | MS.gene035365:intron | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | - | 32568:11303-11322 | None:intergenic | 40.0% | |
| CTCACATCTATGCGAGAATT+GGG | - | 32568:8159-8178 | None:intergenic | 40.0% | |
| GAAATTACGAGTCGCTACAA+AGG | + | 32568:8575-8594 | MS.gene035365:CDS | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | + | 32568:11302-11321 | MS.gene035365:CDS | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | - | 32568:9934-9953 | None:intergenic | 40.0% | |
| GCATTCTTCACTCTACAAAC+CGG | + | 32568:9129-9148 | MS.gene035365:intron | 40.0% | |
| GCTTCTGATACTTTCTCTTC+TGG | + | 32568:8081-8100 | MS.gene035365:CDS | 40.0% | |
| GGTTTAAAAATCAGCAGGAC+AGG | + | 32568:9988-10007 | MS.gene035365:intron | 40.0% | |
| GTACATACATTGGTGTGAGA+GGG | + | 32568:8724-8743 | MS.gene035365:intron | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | - | 32568:10468-10487 | None:intergenic | 40.0% | |
| TAAAGACCTTGGTCATGAGA+AGG | + | 32568:10285-10304 | MS.gene035365:intron | 40.0% | |
| TACATACATTGGTGTGAGAG+GGG | + | 32568:8725-8744 | MS.gene035365:intron | 40.0% | |
| TCACTTTGAACTTCACAGAG+TGG | - | 32568:8542-8561 | None:intergenic | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | + | 32568:11059-11078 | MS.gene035365:CDS | 40.0% | |
| TCCTGTCCCCTTATCATATT+CGG | + | 32568:9925-9944 | MS.gene035365:intron | 40.0% | |
| TCTAATATTCTGCATGGTCC+TGG | + | 32568:8605-8624 | MS.gene035365:CDS | 40.0% | |
| TCTATGCGAGAATTGGGTTT+AGG | - | 32568:8153-8172 | None:intergenic | 40.0% | |
| TGAAACAGAGGAATGGTAAG+AGG | - | 32568:8115-8134 | None:intergenic | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | + | 32568:9607-9626 | MS.gene035365:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | + | 32568:9543-9562 | MS.gene035365:CDS | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | - | 32568:10540-10559 | None:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | - | 32568:11344-11363 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGAAACAGAGGAA+TGG | - | 32568:8122-8141 | None:intergenic | 40.0% |
| ! | AGGTCTTATCTCAGCAAATG+TGG | - | 32568:9086-9105 | None:intergenic | 40.0% |
| ! | CAGAAAAGAGTGTGAAACAG+AGG | - | 32568:8127-8146 | None:intergenic | 40.0% |
| ! | CAGAGAAGAGCTTTGATCTA+CGG | + | 32568:8036-8055 | MS.gene035365:CDS | 40.0% |
| ! | GAACATAGTTGATGTCCCTT+TGG | + | 32568:8333-8352 | MS.gene035365:CDS | 40.0% |
| ! | GTGTTGTTAAATGGCCACAA+TGG | + | 32568:8844-8863 | MS.gene035365:intron | 40.0% |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | + | 32568:10156-10175 | MS.gene035365:intron | 40.0% |
| ! | TTGCAAGATTTTGCAACGAG+TGG | + | 32568:11656-11675 | MS.gene035365:CDS | 40.0% |
| ! | TTTGAAGCAACTGTTCACAG+AGG | - | 32568:10541-10560 | None:intergenic | 40.0% |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | + | 32568:9983-10002 | MS.gene035365:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | + | 32568:9704-9723 | MS.gene035365:CDS | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | + | 32568:10766-10785 | MS.gene035365:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | + | 32568:9703-9722 | MS.gene035365:CDS | 40.0% |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | + | 32568:9689-9708 | MS.gene035365:CDS | 40.0% |
| AAAGTCGTTGAAGGACATGC+AGG | - | 32568:9383-9402 | None:intergenic | 45.0% | |
| AACAGAGGAATGGTAAGAGG+AGG | - | 32568:8112-8131 | None:intergenic | 45.0% | |
| ACAAGGACCAAAGAGCCAAT+AGG | - | 32568:10776-10795 | None:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | - | 32568:11287-11306 | None:intergenic | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | + | 32568:11212-11231 | MS.gene035365:CDS | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | + | 32568:9518-9537 | MS.gene035365:CDS | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | + | 32568:8906-8925 | MS.gene035365:intron | 45.0% | |
| CCTTCACAAATTGCCTATGG+TGG | - | 32568:8909-8928 | None:intergenic | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | + | 32568:11301-11320 | MS.gene035365:CDS | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | + | 32568:10410-10429 | MS.gene035365:CDS | 45.0% | |
| CGTAGATCAAAGCTCTTCTC+TGG | - | 32568:8038-8057 | None:intergenic | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | - | 32568:11374-11393 | None:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | - | 32568:11286-11305 | None:intergenic | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | + | 32568:11324-11343 | MS.gene035365:CDS | 45.0% | |
| GAGTCACCAAAAGTCGTTGA+AGG | - | 32568:9392-9411 | None:intergenic | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | + | 32568:10413-10432 | MS.gene035365:CDS | 45.0% | |
| GCTAGCAAGGTTGCAACAAT+TGG | + | 32568:11172-11191 | MS.gene035365:CDS | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | + | 32568:11257-11276 | MS.gene035365:CDS | 45.0% | |
| GGGTTCATTTGGTAGAGTCT+TGG | + | 32568:9221-9240 | MS.gene035365:intron | 45.0% | |
| GGTACATACATTGGTGTGAG+AGG | + | 32568:8723-8742 | MS.gene035365:intron | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | + | 32568:9602-9621 | MS.gene035365:CDS | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | + | 32568:9606-9625 | MS.gene035365:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | + | 32568:11213-11232 | MS.gene035365:CDS | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | - | 32568:9686-9705 | None:intergenic | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | - | 32568:10539-10558 | None:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | + | 32568:9556-9575 | MS.gene035365:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | - | 32568:11219-11238 | None:intergenic | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | - | 32568:11285-11304 | None:intergenic | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | - | 32568:9557-9576 | None:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | + | 32568:9383-9402 | MS.gene035365:CDS | 45.0% |
| ! | GCTTTTCTGTCAACCACCAT+AGG | + | 32568:8893-8912 | MS.gene035365:intron | 45.0% |
| ! | GGTTGCACTCATTAGCCTAT+TGG | + | 32568:10758-10777 | MS.gene035365:intron | 45.0% |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | - | 32568:11168-11187 | None:intergenic | 45.0% |
| !! | ACCTGTTTTGGACATTCCTG+CGG | + | 32568:8309-8328 | MS.gene035365:CDS | 45.0% |
| ACATCAACTATGTTCCCCGC+AGG | - | 32568:8328-8347 | None:intergenic | 50.0% | |
| ACATTGGTGTGAGAGGGGTT+GGG | + | 32568:8730-8749 | MS.gene035365:intron | 50.0% | |
| AGGACACGATACTTCCCCTT+AGG | + | 32568:9777-9796 | MS.gene035365:CDS | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | + | 32568:9563-9582 | MS.gene035365:CDS | 50.0% | |
| ATTGCGATGGCAACACCACA+TGG | + | 32568:11009-11028 | MS.gene035365:CDS | 50.0% | |
| CAGAGAGACGGAACAATCTC+TGG | - | 32568:8062-8081 | None:intergenic | 50.0% | |
| CTCTTCTCTGGCAAATCCGA+CGG | - | 32568:8026-8045 | None:intergenic | 50.0% | |
| CTGACCTTTACAATGTCGCC+AGG | - | 32568:8626-8645 | None:intergenic | 50.0% | |
| CTTCACCAGTCTGTGCCAAA+GGG | - | 32568:8351-8370 | None:intergenic | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | + | 32568:9713-9732 | MS.gene035365:CDS | 50.0% | |
| GAGAAGGAGAGGGGTTCATT+TGG | + | 32568:9210-9229 | MS.gene035365:intron | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | + | 32568:11625-11644 | MS.gene035365:CDS | 50.0% | |
| GCCGAATATGATAAGGGGAC+AGG | - | 32568:9929-9948 | None:intergenic | 50.0% | |
| GGCAATTTGTGAAGGGATGC+TGG | + | 32568:8914-8933 | MS.gene035365:intron | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | + | 32568:11338-11357 | MS.gene035365:CDS | 50.0% | |
| TACATTGGTGTGAGAGGGGT+TGG | + | 32568:8729-8748 | MS.gene035365:intron | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | + | 32568:10338-10357 | MS.gene035365:intron | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | + | 32568:9963-9982 | MS.gene035365:intron | 50.0% | |
| TGGTCCTGGCGACATTGTAA+AGG | + | 32568:8619-8638 | MS.gene035365:CDS | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | + | 32568:11621-11640 | MS.gene035365:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | - | 32568:11027-11046 | None:intergenic | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | + | 32568:9821-9840 | MS.gene035365:intron | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | + | 32568:9822-9841 | MS.gene035365:intron | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | - | 32568:10431-10450 | None:intergenic | 50.0% |
| !! | AGTAGTATTGCTGATGGCGG+AGG | - | 32568:8992-9011 | None:intergenic | 50.0% |
| !! | CCTGTTTTGGACATTCCTGC+GGG | + | 32568:8310-8329 | MS.gene035365:CDS | 50.0% |
| !! | CGACGTTTTAAGCTCCACCA+GGG | - | 32568:10430-10449 | None:intergenic | 50.0% |
| !! | CTGTTTTGGACATTCCTGCG+GGG | + | 32568:8311-8330 | MS.gene035365:CDS | 50.0% |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | - | 32568:9773-9792 | None:intergenic | 50.0% |
| CCCGCAGGAATGTCCAAAAC+AGG | - | 32568:8313-8332 | None:intergenic | 55.0% | |
| CCTTCACCAGTCTGTGCCAA+AGG | - | 32568:8352-8371 | None:intergenic | 55.0% | |
| CCTTTGGCACAGACTGGTGA+AGG | + | 32568:8349-8368 | MS.gene035365:CDS | 55.0% | |
| CTCTTATCCCTGCTACCGAG+TGG | - | 32568:9832-9851 | None:intergenic | 55.0% | |
| GATGTCCCTTTGGCACAGAC+TGG | + | 32568:8343-8362 | MS.gene035365:CDS | 55.0% | |
| GTCACGCCATTCCTCCATAG+CGG | - | 32568:8872-8891 | None:intergenic | 55.0% | |
| TTGTGAAGGGATGCTGGCCA+TGG | + | 32568:8920-8939 | MS.gene035365:intron | 55.0% | |
| !! | ATGGTGCCGCTATGGAGGAA+TGG | + | 32568:8863-8882 | MS.gene035365:intron | 55.0% |
| CCTCCATAGCGGCACCATTG+TGG | - | 32568:8861-8880 | None:intergenic | 60.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | + | 32568:9967-9986 | MS.gene035365:intron | 60.0% | |
| TGAAGGGATGCTGGCCATGG+TGG | + | 32568:8923-8942 | MS.gene035365:intron | 60.0% | |
| TTGGTGTGAGAGGGGTTGGG+AGG | + | 32568:8733-8752 | MS.gene035365:intron | 60.0% | |
| !! | CCACAATGGTGCCGCTATGG+AGG | + | 32568:8858-8877 | MS.gene035365:intron | 60.0% |
| !! | TGGCCACAATGGTGCCGCTA+TGG | + | 32568:8855-8874 | MS.gene035365:intron | 60.0% |
| TGTGGCCTATGGCGCCACCA+TGG | - | 32568:8940-8959 | None:intergenic | 65.0% | |
| ! | GCTGGCCATGGTGGCGCCAT+AGG | + | 32568:8932-8951 | MS.gene035365:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32568 | gene | 8015 | 11726 | 8015 | ID=MS.gene035365 |
| 32568 | mRNA | 8015 | 11726 | 8015 | ID=MS.gene035365.t1;Parent=MS.gene035365 |
| 32568 | exon | 8015 | 8128 | 8015 | ID=MS.gene035365.t1.exon1;Parent=MS.gene035365.t1 |
| 32568 | CDS | 8015 | 8128 | 8015 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 8268 | 8411 | 8268 | ID=MS.gene035365.t1.exon2;Parent=MS.gene035365.t1 |
| 32568 | CDS | 8268 | 8411 | 8268 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 8515 | 8640 | 8515 | ID=MS.gene035365.t1.exon3;Parent=MS.gene035365.t1 |
| 32568 | CDS | 8515 | 8640 | 8515 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 9344 | 9798 | 9344 | ID=MS.gene035365.t1.exon4;Parent=MS.gene035365.t1 |
| 32568 | CDS | 9344 | 9798 | 9344 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 10341 | 10588 | 10341 | ID=MS.gene035365.t1.exon5;Parent=MS.gene035365.t1 |
| 32568 | CDS | 10341 | 10588 | 10341 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 10992 | 11080 | 10992 | ID=MS.gene035365.t1.exon6;Parent=MS.gene035365.t1 |
| 32568 | CDS | 10992 | 11080 | 10992 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 11161 | 11388 | 11161 | ID=MS.gene035365.t1.exon7;Parent=MS.gene035365.t1 |
| 32568 | CDS | 11161 | 11388 | 11161 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| 32568 | exon | 11613 | 11726 | 11613 | ID=MS.gene035365.t1.exon8;Parent=MS.gene035365.t1 |
| 32568 | CDS | 11613 | 11726 | 11613 | ID=cds.MS.gene035365.t1;Parent=MS.gene035365.t1 |
| Gene Sequence |
| Protein sequence |
