Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036317.t1 | XP_013463890.1 | 95.7 | 537 | 23 | 0 | 1 | 537 | 1 | 537 | 2.2e-310 | 1074.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036317.t1 | Q9FZP1 | 61.3 | 537 | 196 | 7 | 6 | 536 | 5 | 535 | 2.4e-194 | 679.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036317.t1 | A0A072VIG5 | 95.7 | 537 | 23 | 0 | 1 | 537 | 1 | 537 | 1.6e-310 | 1074.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036317 | MS.gene50879 | PPI |
| MS.gene036317 | MS.gene063475 | PPI |
| MS.gene036317 | MS.gene95196 | PPI |
| MS.gene057928 | MS.gene036317 | PPI |
| MS.gene51808 | MS.gene036317 | PPI |
| MS.gene69310 | MS.gene036317 | PPI |
| MS.gene036317 | MS.gene95198 | PPI |
| MS.gene033078 | MS.gene036317 | PPI |
| MS.gene036317 | MS.gene057926 | PPI |
| MS.gene044430 | MS.gene036317 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036317.t1 | MTR_2g451510 | 95.717 | 537 | 23 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1065 |
| MS.gene036317.t1 | MTR_4g116070 | 65.844 | 527 | 165 | 4 | 12 | 536 | 15 | 528 | 0.0 | 698 |
| MS.gene036317.t1 | MTR_4g109300 | 47.429 | 525 | 254 | 7 | 32 | 536 | 20 | 542 | 8.00e-173 | 499 |
| MS.gene036317.t1 | MTR_3g023700 | 47.547 | 530 | 254 | 5 | 13 | 537 | 5 | 515 | 1.40e-172 | 498 |
| MS.gene036317.t1 | MTR_3g023710 | 47.280 | 533 | 255 | 6 | 12 | 537 | 4 | 517 | 1.07e-171 | 496 |
| MS.gene036317.t1 | MTR_3g023690 | 47.081 | 531 | 256 | 6 | 12 | 537 | 4 | 514 | 1.70e-169 | 490 |
| MS.gene036317.t1 | MTR_5g043710 | 49.000 | 500 | 229 | 4 | 41 | 536 | 26 | 503 | 1.77e-169 | 489 |
| MS.gene036317.t1 | MTR_4g109300 | 48.491 | 497 | 234 | 7 | 32 | 508 | 20 | 514 | 1.07e-167 | 487 |
| MS.gene036317.t1 | MTR_4g109300 | 44.544 | 559 | 254 | 8 | 32 | 536 | 20 | 576 | 2.59e-165 | 481 |
| MS.gene036317.t1 | MTR_4g116040 | 56.334 | 371 | 131 | 5 | 166 | 536 | 3 | 342 | 3.92e-139 | 406 |
| MS.gene036317.t1 | MTR_4g109300 | 46.985 | 398 | 189 | 7 | 159 | 536 | 2 | 397 | 2.04e-116 | 350 |
| MS.gene036317.t1 | MTR_3g023690 | 47.927 | 386 | 181 | 4 | 157 | 537 | 56 | 426 | 5.13e-115 | 347 |
| MS.gene036317.t1 | MTR_8g091920 | 36.364 | 341 | 117 | 11 | 184 | 508 | 3 | 259 | 5.77e-42 | 152 |
| MS.gene036317.t1 | MTR_8g091915 | 64.151 | 53 | 19 | 0 | 229 | 281 | 9 | 61 | 5.60e-19 | 81.3 |
| MS.gene036317.t1 | MTR_4g116050 | 67.347 | 49 | 16 | 0 | 96 | 144 | 29 | 77 | 3.41e-17 | 76.6 |
| MS.gene036317.t1 | MTR_4g109260 | 37.333 | 75 | 46 | 1 | 238 | 311 | 59 | 133 | 3.69e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036317.t1 | AT5G34940 | 60.813 | 541 | 200 | 7 | 3 | 537 | 2 | 536 | 0.0 | 681 |
| MS.gene036317.t1 | AT5G34940 | 62.095 | 401 | 147 | 3 | 142 | 537 | 1 | 401 | 0.0 | 520 |
| MS.gene036317.t1 | AT5G61250 | 47.206 | 519 | 262 | 3 | 30 | 536 | 20 | 538 | 1.27e-179 | 516 |
| MS.gene036317.t1 | AT5G61250 | 47.206 | 519 | 262 | 3 | 30 | 536 | 20 | 538 | 1.27e-179 | 516 |
| MS.gene036317.t1 | AT5G61250 | 47.206 | 519 | 262 | 3 | 30 | 536 | 20 | 538 | 1.27e-179 | 516 |
| MS.gene036317.t1 | AT5G34940 | 61.399 | 386 | 141 | 5 | 3 | 386 | 2 | 381 | 1.81e-175 | 500 |
| MS.gene036317.t1 | AT5G07830 | 46.992 | 532 | 269 | 6 | 18 | 536 | 11 | 542 | 3.08e-175 | 505 |
| MS.gene036317.t1 | AT5G34940 | 61.921 | 302 | 103 | 2 | 244 | 537 | 2 | 299 | 2.16e-134 | 392 |
Find 123 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATTGAATGCTCTTTA+TGG | 0.131939 | 2.4:+41357561 | MS.gene036317:CDS |
| TTGTATCATTAACAGGTATT+TGG | 0.205946 | 2.4:+41358717 | MS.gene036317:intron |
| ATGCATTTGTGTATAGTTTC+TGG | 0.217121 | 2.4:+41358457 | MS.gene036317:CDS |
| GAGAAAGGAGCAATCCTTAT+TGG | 0.269954 | 2.4:-41359991 | None:intergenic |
| TTGCAAGATGAACTGGTATA+TGG | 0.282033 | 2.4:+41357256 | MS.gene036317:CDS |
| ATATTTGCAGTGCTCTTCTT+TGG | 0.283909 | 2.4:+41359512 | MS.gene036317:intron |
| CCTCCTCAGAAATGTGATTA+TGG | 0.333661 | 2.4:+41356283 | MS.gene036317:CDS |
| TGATTCTGGAAATGGGTTCT+TGG | 0.335337 | 2.4:+41356086 | None:intergenic |
| TCTTGCTTCTCTTCTCAATC+TGG | 0.339803 | 2.4:+41356321 | MS.gene036317:CDS |
| GTCTGGATTGGGAAGGAAAT+TGG | 0.347707 | 2.4:-41358827 | None:intergenic |
| TATTGCAGACAGAGTTTGAT+AGG | 0.355616 | 2.4:+41358778 | MS.gene036317:CDS |
| CGACGGTTGTGTTGTTGTCC+AGG | 0.381277 | 2.4:-41359735 | None:intergenic |
| GTAAGGCATCTTTCTATGTA+AGG | 0.381689 | 2.4:-41359785 | None:intergenic |
| TAAGCTCATCAAAGCCAATA+AGG | 0.386395 | 2.4:+41359977 | MS.gene036317:CDS |
| TATACCTGATGCTGTTGTTC+CGG | 0.386694 | 2.4:+41360029 | MS.gene036317:CDS |
| ACAGCATGGGTTGGTGAGTC+AGG | 0.398551 | 2.4:+41358399 | MS.gene036317:CDS |
| TTTGATGAGCTTACATATAG+AGG | 0.399936 | 2.4:-41359967 | None:intergenic |
| AAAGGGAATGTTATGATTGA+TGG | 0.402253 | 2.4:+41356202 | MS.gene036317:CDS |
| CCTCCAGGCGCAATGACTAA+TGG | 0.413718 | 2.4:-41357925 | None:intergenic |
| TCTTCTTTGGCACCGACTCA+TGG | 0.418252 | 2.4:+41359525 | MS.gene036317:CDS |
| TTCCACCCTGTGGAGTTAGA+TGG | 0.421853 | 2.4:-41359867 | None:intergenic |
| AGAAATGCGTCTGCAATGTT+TGG | 0.423440 | 2.4:+41357316 | MS.gene036317:CDS |
| AGTTTGATAGGAGGAAACTA+TGG | 0.431640 | 2.4:+41358790 | MS.gene036317:CDS |
| TCACCATTGAAACTGAGATT+AGG | 0.436550 | 2.4:+41357226 | MS.gene036317:CDS |
| GACATTCATGGATGGGAACT+TGG | 0.436646 | 2.4:+41357672 | MS.gene036317:CDS |
| GTTCATCCCATCTTGGCATT+GGG | 0.436669 | 2.4:-41357357 | None:intergenic |
| TACCTATAGTAGTCTGGATT+GGG | 0.447932 | 2.4:-41358838 | None:intergenic |
| ACAACCGTCGAAGCGACATT+TGG | 0.448324 | 2.4:+41359748 | MS.gene036317:CDS |
| AGTTCATCCCATCTTGGCAT+TGG | 0.449368 | 2.4:-41357358 | None:intergenic |
| ATTTAATACCTATAGTAGTC+TGG | 0.451269 | 2.4:-41358844 | None:intergenic |
| GTACTATCAACTACCTTCTC+AGG | 0.451571 | 2.4:+41359556 | MS.gene036317:CDS |
| ACACACCACATTTATAGCCT+TGG | 0.452398 | 2.4:+41358012 | MS.gene036317:CDS |
| GTGATTATGGTACATGTAGT+TGG | 0.454586 | 2.4:+41356296 | MS.gene036317:CDS |
| ATACCTATAGTAGTCTGGAT+TGG | 0.458022 | 2.4:-41358839 | None:intergenic |
| TCTCAGTTTCAATGGTGAAA+AGG | 0.460420 | 2.4:-41357221 | None:intergenic |
| TTTGTGCAACTTTGGATTGG+TGG | 0.462446 | 2.4:+41356260 | MS.gene036317:CDS |
| TGGCAGTTTGCAAGATGAAC+TGG | 0.463605 | 2.4:+41357249 | MS.gene036317:CDS |
| ATTGATGGTAGTTCTGTGAT+TGG | 0.468602 | 2.4:+41356217 | MS.gene036317:CDS |
| TGCAAGATGAACTGGTATAT+GGG | 0.470523 | 2.4:+41357257 | MS.gene036317:CDS |
| TGATTAAGTTCATCCCATCT+TGG | 0.471533 | 2.4:-41357364 | None:intergenic |
| TTATTTGTGCAACTTTGGAT+TGG | 0.472089 | 2.4:+41356257 | MS.gene036317:CDS |
| GTCCAGGTTGATCAATAGTA+TGG | 0.473426 | 2.4:-41359719 | None:intergenic |
| TTCCCAATCCAGACTACTAT+AGG | 0.475408 | 2.4:+41358836 | MS.gene036317:CDS |
| TGATTATGGTACATGTAGTT+GGG | 0.480870 | 2.4:+41356297 | MS.gene036317:CDS |
| CAAGCCGGAACAACAGCATC+AGG | 0.484868 | 2.4:-41360033 | None:intergenic |
| ATCTAATAAATCTGTGGATG+TGG | 0.485447 | 2.4:+41357987 | MS.gene036317:CDS |
| CCACCTAATCTCAGTTTCAA+TGG | 0.488877 | 2.4:-41357229 | None:intergenic |
| TTAAGAAAATCTTGTTGTTG+AGG | 0.489628 | 2.4:-41357066 | None:intergenic |
| TTGAATAAACGATTCGGCAT+TGG | 0.492524 | 2.4:-41357628 | None:intergenic |
| GGAAAGAACTACGACATTCA+TGG | 0.497772 | 2.4:+41357660 | MS.gene036317:CDS |
| GAGGTTTCTTTGATGCAAGT+TGG | 0.500545 | 2.4:+41357944 | MS.gene036317:CDS |
| AGCCAAGTCATGTTACTGAA+TGG | 0.504434 | 2.4:+41359898 | MS.gene036317:CDS |
| CTTCTTTGGCACCGACTCAT+GGG | 0.507966 | 2.4:+41359526 | MS.gene036317:CDS |
| CATGGGTTGGTGAGTCAGGA+GGG | 0.509443 | 2.4:+41358403 | MS.gene036317:CDS |
| CTTACATATAGAGGCTTCAA+AGG | 0.510130 | 2.4:-41359958 | None:intergenic |
| ATGATGAAGATGTGAAGAAA+GGG | 0.517391 | 2.4:+41356185 | MS.gene036317:CDS |
| GCAGACGCATTTCTAACAAA+AGG | 0.518051 | 2.4:-41357307 | None:intergenic |
| GGTGCCTCCCAATGCCAAGA+TGG | 0.519720 | 2.4:+41357350 | MS.gene036317:CDS |
| AGAGACAAAACTACATTCAA+AGG | 0.521273 | 2.4:+41358339 | MS.gene036317:CDS |
| CACCATACTATTGATCAACC+TGG | 0.524123 | 2.4:+41359717 | MS.gene036317:CDS |
| TTCCATTCAGTAACATGACT+TGG | 0.524741 | 2.4:-41359900 | None:intergenic |
| TATGGAAAGTCGGTACATCA+TGG | 0.524959 | 2.4:+41357579 | MS.gene036317:CDS |
| TGAGAAAATACAATGGAGAA+AGG | 0.526211 | 2.4:-41360006 | None:intergenic |
| TATCTTGTTTGTTCCTGAGA+AGG | 0.526469 | 2.4:-41359569 | None:intergenic |
| AAGCCATTAGTCATTGCGCC+TGG | 0.532443 | 2.4:+41357922 | MS.gene036317:CDS |
| CTTGCATCAAAGAAACCTCC+AGG | 0.538218 | 2.4:-41357940 | None:intergenic |
| CATCCCATCTTGGCATTGGG+AGG | 0.547394 | 2.4:-41357354 | None:intergenic |
| TGTGTATACACTATTTGGCA+TGG | 0.550496 | 2.4:+41356119 | MS.gene036317:CDS |
| GGCGCAATGACTAATGGCTT+AGG | 0.552752 | 2.4:-41357919 | None:intergenic |
| TATGATGAAGATGTGAAGAA+AGG | 0.552887 | 2.4:+41356184 | MS.gene036317:CDS |
| GGTGTATTGAATAAACGATT+CGG | 0.554661 | 2.4:-41357634 | None:intergenic |
| GTGCCTCCCAATGCCAAGAT+GGG | 0.557147 | 2.4:+41357351 | MS.gene036317:CDS |
| TGGCACCGACTCATGGGAAG+CGG | 0.557248 | 2.4:+41359532 | MS.gene036317:CDS |
| TTGTCTCTATCAAGATAGGA+AGG | 0.557907 | 2.4:-41358324 | None:intergenic |
| CAACATTGCTAGCCGCAAGC+CGG | 0.559036 | 2.4:-41360048 | None:intergenic |
| ATCGCCAAATGTCGCTTCGA+CGG | 0.560109 | 2.4:-41359752 | None:intergenic |
| TCGGCATTGGTGTAGTTCCA+AGG | 0.562201 | 2.4:-41357615 | None:intergenic |
| AGAGTACCATCTAACTCCAC+AGG | 0.562210 | 2.4:+41359861 | MS.gene036317:CDS |
| TGTCAGGCAATGAATTGAGT+GGG | 0.565818 | 2.4:+41357803 | MS.gene036317:intron |
| CACATTTATAGCCTTGGACC+AGG | 0.565926 | 2.4:+41358018 | MS.gene036317:CDS |
| GCATGGGTTGGTGAGTCAGG+AGG | 0.569855 | 2.4:+41358402 | MS.gene036317:CDS |
| ATGGGTTGGTGAGTCAGGAG+GGG | 0.574317 | 2.4:+41358404 | MS.gene036317:CDS |
| GAATGCTCTTTATGGAAAGT+CGG | 0.575537 | 2.4:+41357569 | MS.gene036317:CDS |
| TCGTTTATTCAATACACCGT+TGG | 0.576562 | 2.4:+41357639 | MS.gene036317:CDS |
| ACCAACCCATGCTGTTGCTG+AGG | 0.580019 | 2.4:-41358391 | None:intergenic |
| GAACTACGACATTCATGGAT+GGG | 0.580115 | 2.4:+41357665 | MS.gene036317:CDS |
| CAGGAACCTCAGCAACAGCA+TGG | 0.580368 | 2.4:+41358385 | MS.gene036317:CDS |
| ACCTCAGCAACAGCATGGGT+TGG | 0.582674 | 2.4:+41358390 | MS.gene036317:CDS |
| CCATTGAAACTGAGATTAGG+TGG | 0.583219 | 2.4:+41357229 | MS.gene036317:CDS |
| CTATGTATATTTCCACCCTG+TGG | 0.586599 | 2.4:-41359877 | None:intergenic |
| ATGGTTATACAGAAGGACCT+TGG | 0.589347 | 2.4:+41357598 | MS.gene036317:CDS |
| ATGCATCGGATACAAGATGA+TGG | 0.592109 | 2.4:-41358440 | None:intergenic |
| AGAACTACGACATTCATGGA+TGG | 0.592767 | 2.4:+41357664 | MS.gene036317:CDS |
| TTTCTAACAAAAGGAGTGCA+CGG | 0.594964 | 2.4:-41357298 | None:intergenic |
| GGCGAAAAGTACCTGGTCCA+AGG | 0.595921 | 2.4:-41358029 | None:intergenic |
| GATGCTGTTGTTCCGGCTTG+CGG | 0.598210 | 2.4:+41360036 | MS.gene036317:CDS |
| TGGATTGGGAAGGAAATTGG+TGG | 0.602050 | 2.4:-41358824 | None:intergenic |
| GCAATGTTTGGATTCACACA+AGG | 0.602737 | 2.4:+41357328 | MS.gene036317:CDS |
| CTGTCAGGCAATGAATTGAG+TGG | 0.605659 | 2.4:+41357802 | MS.gene036317:intron |
| GTACATCATGGTTATACAGA+AGG | 0.609586 | 2.4:+41357591 | MS.gene036317:CDS |
| GAAACTATACACAAATGCAT+CGG | 0.619169 | 2.4:-41358454 | None:intergenic |
| TGCAGACAGAGTTTGATAGG+AGG | 0.621831 | 2.4:+41358781 | MS.gene036317:CDS |
| AACAGGTATTTGGATCAACT+CGG | 0.623593 | 2.4:+41358727 | MS.gene036317:intron |
| AGGAGTTGATACGCACCTTG+TGG | 0.627565 | 2.4:+41358287 | MS.gene036317:intron |
| CCATTAGTCATTGCGCCTGG+AGG | 0.629727 | 2.4:+41357925 | MS.gene036317:CDS |
| AAGCAAATCTAATAAATCTG+TGG | 0.629735 | 2.4:+41357981 | MS.gene036317:CDS |
| AGGAACCTCAGCAACAGCAT+GGG | 0.631168 | 2.4:+41358386 | MS.gene036317:CDS |
| CTGGTCCAAGGCTATAAATG+TGG | 0.631236 | 2.4:-41358017 | None:intergenic |
| CCATAATCACATTTCTGAGG+AGG | 0.634288 | 2.4:-41356283 | None:intergenic |
| AATGTCGTAGTTCTTTCCAA+CGG | 0.638412 | 2.4:-41357655 | None:intergenic |
| ACATATAGAGGCTTCAAAGG+AGG | 0.639329 | 2.4:-41359955 | None:intergenic |
| CAATGTTTGGATTCACACAA+GGG | 0.641441 | 2.4:+41357329 | MS.gene036317:CDS |
| TATAGTAGTCTGGATTGGGA+AGG | 0.650930 | 2.4:-41358834 | None:intergenic |
| GTACACCGCTTCCCATGAGT+CGG | 0.659571 | 2.4:-41359537 | None:intergenic |
| GATTATGGTACATGTAGTTG+GGG | 0.660234 | 2.4:+41356298 | MS.gene036317:CDS |
| GTACCATAATCACATTTCTG+AGG | 0.667698 | 2.4:-41356286 | None:intergenic |
| TCAGGAGGGGCTTATAACAG+TGG | 0.681174 | 2.4:+41358417 | MS.gene036317:CDS |
| AGGTATATGAGAAAATACAA+TGG | 0.684429 | 2.4:-41360013 | None:intergenic |
| GTCAGGCAATGAATTGAGTG+GGG | 0.692114 | 2.4:+41357804 | MS.gene036317:intron |
| AACACAGTGAGTGATGAAAG+TGG | 0.692880 | 2.4:+41356160 | MS.gene036317:CDS |
| TACCATCTAACTCCACAGGG+TGG | 0.701843 | 2.4:+41359865 | MS.gene036317:CDS |
| GAGTACCATCTAACTCCACA+GGG | 0.705711 | 2.4:+41359862 | MS.gene036317:CDS |
| TCAGGCAATGAATTGAGTGG+GGG | 0.711927 | 2.4:+41357805 | MS.gene036317:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAGATAAAGAAAA+AGG | - | chr2.4:41356360-41356379 | None:intergenic | 10.0% |
| !! | TTATTAATTAATTAACTTCT+TGG | + | chr2.4:41356903-41356922 | MS.gene036317:intron | 10.0% |
| !! | ATTGTTTATTGTGATAAAAA+TGG | + | chr2.4:41357124-41357143 | MS.gene036317:intron | 15.0% |
| !!! | TTCATTATTTTTGAATTGTA+AGG | - | chr2.4:41359805-41359824 | None:intergenic | 15.0% |
| !! | AAAGATAAAGAAAAAGGAAA+AGG | - | chr2.4:41356354-41356373 | None:intergenic | 20.0% |
| !! | AAGAATGAGAAACATTATTA+TGG | + | chr2.4:41358971-41358990 | MS.gene036317:intron | 20.0% |
| !!! | AAATCTTGAACATTTTTTCA+AGG | + | chr2.4:41357001-41357020 | MS.gene036317:intron | 20.0% |
| !!! | AGAAATAATTGATGATTTGA+AGG | - | chr2.4:41358243-41358262 | None:intergenic | 20.0% |
| !!! | ATAATAATCCTATTTTCTGT+AGG | + | chr2.4:41356865-41356884 | MS.gene036317:intron | 20.0% |
| !!! | TAATAATCCTATTTTCTGTA+GGG | + | chr2.4:41356866-41356885 | MS.gene036317:intron | 20.0% |
| ! | AAGCAAATCTAATAAATCTG+TGG | + | chr2.4:41357981-41358000 | MS.gene036317:CDS | 25.0% |
| ! | AATAAAATTCTTCTTGCCTA+AGG | + | chr2.4:41357747-41357766 | MS.gene036317:intron | 25.0% |
| ! | AATCATTTCTTCCAAAAATC+AGG | + | chr2.4:41357382-41357401 | MS.gene036317:CDS | 25.0% |
| ! | AGGTATATGAGAAAATACAA+TGG | - | chr2.4:41360016-41360035 | None:intergenic | 25.0% |
| ! | ATCACAATAAACAATAGAGA+TGG | - | chr2.4:41357119-41357138 | None:intergenic | 25.0% |
| ! | ATCATTCACTTGATATTCAT+AGG | - | chr2.4:41359645-41359664 | None:intergenic | 25.0% |
| ! | ATCATTTCTTCCAAAAATCA+GGG | + | chr2.4:41357383-41357402 | MS.gene036317:CDS | 25.0% |
| ! | ATGTTACCATGAAAATACTA+TGG | - | chr2.4:41359467-41359486 | None:intergenic | 25.0% |
| ! | ATTTAATACCTATAGTAGTC+TGG | - | chr2.4:41358847-41358866 | None:intergenic | 25.0% |
| ! | CTTAATATATGTGTCATGTT+TGG | + | chr2.4:41359376-41359395 | MS.gene036317:intron | 25.0% |
| ! | TCATTCACTTGATATTCATA+GGG | - | chr2.4:41359644-41359663 | None:intergenic | 25.0% |
| ! | TGTATGATTGTATCATTAAC+AGG | + | chr2.4:41358710-41358729 | MS.gene036317:intron | 25.0% |
| ! | TTGTATCATTAACAGGTATT+TGG | + | chr2.4:41358717-41358736 | MS.gene036317:intron | 25.0% |
| !! | AAAAATGTTCTTGAAAGTAC+AGG | + | chr2.4:41358366-41358385 | MS.gene036317:CDS | 25.0% |
| !! | ATTTTCTTAAATGCAGTGAA+AGG | + | chr2.4:41357079-41357098 | MS.gene036317:CDS | 25.0% |
| !! | CTAAATTTTACCCTGATTTT+TGG | - | chr2.4:41357396-41357415 | None:intergenic | 25.0% |
| !! | GATTTTGTGTATACACTATT+TGG | + | chr2.4:41356114-41356133 | MS.gene036317:CDS | 25.0% |
| !! | TACTTTCAAGAACATTTTTC+AGG | - | chr2.4:41358365-41358384 | None:intergenic | 25.0% |
| !! | TCAATGTGTTAGTTCATTTT+GGG | + | chr2.4:41359028-41359047 | MS.gene036317:intron | 25.0% |
| !! | TTCAATGTGTTAGTTCATTT+TGG | + | chr2.4:41359027-41359046 | MS.gene036317:intron | 25.0% |
| !! | TTCAGTGCTAAGATTATTTT+TGG | + | chr2.4:41357543-41357562 | MS.gene036317:intron | 25.0% |
| !! | TTTTCATGGTAACATTTTTG+TGG | + | chr2.4:41359472-41359491 | MS.gene036317:intron | 25.0% |
| !!! | ATCTTGTTTTCTACAAACAA+TGG | - | chr2.4:41356779-41356798 | None:intergenic | 25.0% |
| !!! | CAAAACATTGTTGCTTTTTA+TGG | - | chr2.4:41356728-41356747 | None:intergenic | 25.0% |
| !!! | TCTTGTTTTCTACAAACAAT+GGG | - | chr2.4:41356778-41356797 | None:intergenic | 25.0% |
| !!! | TGATTTTATTTGTGCAACTT+TGG | + | chr2.4:41356252-41356271 | MS.gene036317:CDS | 25.0% |
| !!! | TTAAGAAAATCTTGTTGTTG+AGG | - | chr2.4:41357069-41357088 | None:intergenic | 25.0% |
| !!! | TTTTCAATTGAACTTTGAAG+AGG | - | chr2.4:41359832-41359851 | None:intergenic | 25.0% |
| !!! | TTTTTATTTGCAGATTAGCT+TGG | - | chr2.4:41356702-41356721 | None:intergenic | 25.0% |
| AAAGGGAATGTTATGATTGA+TGG | + | chr2.4:41356202-41356221 | MS.gene036317:CDS | 30.0% | |
| ACACATGTAATTACAAGTGT+CGG | + | chr2.4:41356488-41356507 | MS.gene036317:intron | 30.0% | |
| ACACTTGTAATTACATGTGT+CGG | - | chr2.4:41356488-41356507 | None:intergenic | 30.0% | |
| AGAGACAAAACTACATTCAA+AGG | + | chr2.4:41358339-41358358 | MS.gene036317:CDS | 30.0% | |
| AGTGCATACATACTACATAT+AGG | - | chr2.4:41357420-41357439 | None:intergenic | 30.0% | |
| ATATGCTTGATCTTACAGAA+AGG | + | chr2.4:41359691-41359710 | MS.gene036317:intron | 30.0% | |
| ATCTAATAAATCTGTGGATG+TGG | + | chr2.4:41357987-41358006 | MS.gene036317:CDS | 30.0% | |
| ATGATGAAGATGTGAAGAAA+GGG | + | chr2.4:41356185-41356204 | MS.gene036317:CDS | 30.0% | |
| ATGATGAGAATCAATGCTAA+GGG | - | chr2.4:41359133-41359152 | None:intergenic | 30.0% | |
| ATGCATTTGTGTATAGTTTC+TGG | + | chr2.4:41358457-41358476 | MS.gene036317:CDS | 30.0% | |
| ATGTTTCTCATTCTTTAGCA+AGG | - | chr2.4:41358966-41358985 | None:intergenic | 30.0% | |
| CAATAAACCCTACAGAAAAT+AGG | - | chr2.4:41356876-41356895 | None:intergenic | 30.0% | |
| CAGTGTTAAACTACTTTACA+CGG | - | chr2.4:41358127-41358146 | None:intergenic | 30.0% | |
| CCTTGATTTAGACTCATTTA+GGG | + | chr2.4:41358501-41358520 | MS.gene036317:intron | 30.0% | |
| CTTGATTTAGACTCATTTAG+GGG | + | chr2.4:41358502-41358521 | MS.gene036317:intron | 30.0% | |
| GAAACTATACACAAATGCAT+CGG | - | chr2.4:41358457-41358476 | None:intergenic | 30.0% | |
| GAACTAACACATTGAAAAAG+TGG | - | chr2.4:41359023-41359042 | None:intergenic | 30.0% | |
| GGAAAATTCCCTATTTCAAA+TGG | + | chr2.4:41359435-41359454 | MS.gene036317:intron | 30.0% | |
| GGTGTATTGAATAAACGATT+CGG | - | chr2.4:41357637-41357656 | None:intergenic | 30.0% | |
| GTAATGAATATCAGCCAATT+CGG | - | chr2.4:41358053-41358072 | None:intergenic | 30.0% | |
| TACCATGAAAATACTATGGA+TGG | - | chr2.4:41359463-41359482 | None:intergenic | 30.0% | |
| TATGATGAAGATGTGAAGAA+AGG | + | chr2.4:41356184-41356203 | MS.gene036317:CDS | 30.0% | |
| TATGATGAGAATCAATGCTA+AGG | - | chr2.4:41359134-41359153 | None:intergenic | 30.0% | |
| TCCTTGATTTAGACTCATTT+AGG | + | chr2.4:41358500-41358519 | MS.gene036317:intron | 30.0% | |
| TGAGAAAATACAATGGAGAA+AGG | - | chr2.4:41360009-41360028 | None:intergenic | 30.0% | |
| TGATTATGGTACATGTAGTT+GGG | + | chr2.4:41356297-41356316 | MS.gene036317:CDS | 30.0% | |
| TGTTTGTCTTGAAATCTTCA+AGG | + | chr2.4:41356386-41356405 | MS.gene036317:intron | 30.0% | |
| TTATTTGTGCAACTTTGGAT+TGG | + | chr2.4:41356257-41356276 | MS.gene036317:CDS | 30.0% | |
| TTGAATGTAACCACATGTAT+TGG | - | chr2.4:41358601-41358620 | None:intergenic | 30.0% | |
| TTTGATGAGCTTACATATAG+AGG | - | chr2.4:41359970-41359989 | None:intergenic | 30.0% | |
| TTTGGATTGAATGCTCTTTA+TGG | + | chr2.4:41357561-41357580 | MS.gene036317:CDS | 30.0% | |
| ! | AAAGCAATATAGAGTATTCG+AGG | + | chr2.4:41359291-41359310 | MS.gene036317:intron | 30.0% |
| ! | ATCCATCCATAGTATTTTCA+TGG | + | chr2.4:41359458-41359477 | MS.gene036317:intron | 30.0% |
| ! | TTGAAATAGGGAATTTTCCA+AGG | - | chr2.4:41359434-41359453 | None:intergenic | 30.0% |
| !! | ACTTAATTTGTCTTCTACAC+AGG | + | chr2.4:41358267-41358286 | MS.gene036317:intron | 30.0% |
| !! | AGTTTTGTCTCTATCAAGAT+AGG | - | chr2.4:41358331-41358350 | None:intergenic | 30.0% |
| !! | CATTGATTCTCATCATATCA+CGG | + | chr2.4:41359137-41359156 | MS.gene036317:intron | 30.0% |
| !! | GTTTTAAGTGTAAACTCAGA+TGG | + | chr2.4:41359925-41359944 | MS.gene036317:CDS | 30.0% |
| !! | TGTTTTCGAAATGTTGTTTG+AGG | + | chr2.4:41356655-41356674 | MS.gene036317:intron | 30.0% |
| !!! | AAGTTCTTTATTTTGCCACA+TGG | - | chr2.4:41358175-41358194 | None:intergenic | 30.0% |
| !!! | GATTCAGAATTTTTTCCACA+AGG | - | chr2.4:41358305-41358324 | None:intergenic | 30.0% |
| AACAGGTATTTGGATCAACT+CGG | + | chr2.4:41358727-41358746 | MS.gene036317:intron | 35.0% | |
| AATGTCGTAGTTCTTTCCAA+CGG | - | chr2.4:41357658-41357677 | None:intergenic | 35.0% | |
| ACATACAACTTTGTCTACCT+TGG | + | chr2.4:41359414-41359433 | MS.gene036317:intron | 35.0% | |
| AGTTTGATAGGAGGAAACTA+TGG | + | chr2.4:41358790-41358809 | MS.gene036317:CDS | 35.0% | |
| ATACCTATAGTAGTCTGGAT+TGG | - | chr2.4:41358842-41358861 | None:intergenic | 35.0% | |
| ATATTTGCAGTGCTCTTCTT+TGG | + | chr2.4:41359512-41359531 | MS.gene036317:intron | 35.0% | |
| CAATGTTTGGATTCACACAA+GGG | + | chr2.4:41357329-41357348 | MS.gene036317:CDS | 35.0% | |
| CATTCTATGAAGCACAGATA+TGG | + | chr2.4:41356440-41356459 | MS.gene036317:intron | 35.0% | |
| CCCTAAATGAGTCTAAATCA+AGG | - | chr2.4:41358504-41358523 | None:intergenic | 35.0% | |
| CTTACATATAGAGGCTTCAA+AGG | - | chr2.4:41359961-41359980 | None:intergenic | 35.0% | |
| GAATGCTCTTTATGGAAAGT+CGG | + | chr2.4:41357569-41357588 | MS.gene036317:CDS | 35.0% | |
| GAATTGTAAGCTATGAAGCA+CGG | - | chr2.4:41356599-41356618 | None:intergenic | 35.0% | |
| GAGTCTAAATCAAGGATCAA+GGG | - | chr2.4:41358496-41358515 | None:intergenic | 35.0% | |
| GATTATGGTACATGTAGTTG+GGG | + | chr2.4:41356298-41356317 | MS.gene036317:CDS | 35.0% | |
| GTACATCATGGTTATACAGA+AGG | + | chr2.4:41357591-41357610 | MS.gene036317:CDS | 35.0% | |
| GTACCATAATCACATTTCTG+AGG | - | chr2.4:41356289-41356308 | None:intergenic | 35.0% | |
| GTGATTATGGTACATGTAGT+TGG | + | chr2.4:41356296-41356315 | MS.gene036317:CDS | 35.0% | |
| TAAGCTCATCAAAGCCAATA+AGG | + | chr2.4:41359977-41359996 | MS.gene036317:CDS | 35.0% | |
| TACCTATAGTAGTCTGGATT+GGG | - | chr2.4:41358841-41358860 | None:intergenic | 35.0% | |
| TATTGCAGACAGAGTTTGAT+AGG | + | chr2.4:41358778-41358797 | MS.gene036317:CDS | 35.0% | |
| TCACCATTGAAACTGAGATT+AGG | + | chr2.4:41357226-41357245 | MS.gene036317:CDS | 35.0% | |
| TCGTTTATTCAATACACCGT+TGG | + | chr2.4:41357639-41357658 | MS.gene036317:CDS | 35.0% | |
| TCTCAGTTTCAATGGTGAAA+AGG | - | chr2.4:41357224-41357243 | None:intergenic | 35.0% | |
| TCTGTTCTGTCATTGTTATG+TGG | - | chr2.4:41356815-41356834 | None:intergenic | 35.0% | |
| TGAGTCTAAATCAAGGATCA+AGG | - | chr2.4:41358497-41358516 | None:intergenic | 35.0% | |
| TGATTAAGTTCATCCCATCT+TGG | - | chr2.4:41357367-41357386 | None:intergenic | 35.0% | |
| TGCAAGATGAACTGGTATAT+GGG | + | chr2.4:41357257-41357276 | MS.gene036317:CDS | 35.0% | |
| TGTGTATACACTATTTGGCA+TGG | + | chr2.4:41356119-41356138 | MS.gene036317:CDS | 35.0% | |
| TTCCATTCAGTAACATGACT+TGG | - | chr2.4:41359903-41359922 | None:intergenic | 35.0% | |
| TTGAGGTTTGAATGCATGTT+GGG | + | chr2.4:41356672-41356691 | MS.gene036317:intron | 35.0% | |
| TTGCAAGATGAACTGGTATA+TGG | + | chr2.4:41357256-41357275 | MS.gene036317:CDS | 35.0% | |
| TTGTCTCTATCAAGATAGGA+AGG | - | chr2.4:41358327-41358346 | None:intergenic | 35.0% | |
| ! | ACTTTAGATTGAAGGCATGT+CGG | + | chr2.4:41358549-41358568 | MS.gene036317:intron | 35.0% |
| ! | ATGCCTTCAATCTAAAGTGT+CGG | - | chr2.4:41358547-41358566 | None:intergenic | 35.0% |
| ! | ATTGATGGTAGTTCTGTGAT+TGG | + | chr2.4:41356217-41356236 | MS.gene036317:CDS | 35.0% |
| ! | CAATATAGAGTATTCGAGGT+CGG | + | chr2.4:41359295-41359314 | MS.gene036317:intron | 35.0% |
| ! | GCATATTAGTTTCGATCTCA+AGG | - | chr2.4:41359677-41359696 | None:intergenic | 35.0% |
| ! | GGATGGATCCATTTGAAATA+GGG | - | chr2.4:41359446-41359465 | None:intergenic | 35.0% |
| ! | GTAAGGCATCTTTCTATGTA+AGG | - | chr2.4:41359788-41359807 | None:intergenic | 35.0% |
| ! | TATCTTGTTTGTTCCTGAGA+AGG | - | chr2.4:41359572-41359591 | None:intergenic | 35.0% |
| ! | TGGATGGATCCATTTGAAAT+AGG | - | chr2.4:41359447-41359466 | None:intergenic | 35.0% |
| ! | TTAGTCCTCTATTTTCCATG+TGG | + | chr2.4:41358157-41358176 | MS.gene036317:intron | 35.0% |
| ! | TTGAATAAACGATTCGGCAT+TGG | - | chr2.4:41357631-41357650 | None:intergenic | 35.0% |
| ! | TTTCTAACAAAAGGAGTGCA+CGG | - | chr2.4:41357301-41357320 | None:intergenic | 35.0% |
| ! | TTTGAGGTTTGAATGCATGT+TGG | + | chr2.4:41356671-41356690 | MS.gene036317:intron | 35.0% |
| ! | TTTTGCCACATGGAAAATAG+AGG | - | chr2.4:41358165-41358184 | None:intergenic | 35.0% |
| !! | TGACTAATGGATTCACTTTC+TGG | + | chr2.4:41357473-41357492 | MS.gene036317:intron | 35.0% |
| !! | TGAGTTCTAGAATGTTTGCT+TGG | + | chr2.4:41356409-41356428 | MS.gene036317:intron | 35.0% |
| AACACAGTGAGTGATGAAAG+TGG | + | chr2.4:41356160-41356179 | MS.gene036317:CDS | 40.0% | |
| ACACACCACATTTATAGCCT+TGG | + | chr2.4:41358012-41358031 | MS.gene036317:CDS | 40.0% | |
| ACACCGACACTTTAGATTGA+AGG | + | chr2.4:41358541-41358560 | MS.gene036317:intron | 40.0% | |
| ACATATAGAGGCTTCAAAGG+AGG | - | chr2.4:41359958-41359977 | None:intergenic | 40.0% | |
| ACTCAATGTACTCAAGCCTT+AGG | - | chr2.4:41357766-41357785 | None:intergenic | 40.0% | |
| AGAAATGCGTCTGCAATGTT+TGG | + | chr2.4:41357316-41357335 | MS.gene036317:CDS | 40.0% | |
| AGAACTACGACATTCATGGA+TGG | + | chr2.4:41357664-41357683 | MS.gene036317:CDS | 40.0% | |
| AGACATTTGATTCCCACAGA+CGG | + | chr2.4:41359221-41359240 | MS.gene036317:intron | 40.0% | |
| AGCCAAGTCATGTTACTGAA+TGG | + | chr2.4:41359898-41359917 | MS.gene036317:CDS | 40.0% | |
| ATGCATCGGATACAAGATGA+TGG | - | chr2.4:41358443-41358462 | None:intergenic | 40.0% | |
| ATGGTTATACAGAAGGACCT+TGG | + | chr2.4:41357598-41357617 | MS.gene036317:CDS | 40.0% | |
| ATTCACACATGCTAGCTGAA+AGG | - | chr2.4:41359200-41359219 | None:intergenic | 40.0% | |
| CACCATACTATTGATCAACC+TGG | + | chr2.4:41359717-41359736 | MS.gene036317:CDS | 40.0% | |
| CCACCTAATCTCAGTTTCAA+TGG | - | chr2.4:41357232-41357251 | None:intergenic | 40.0% | |
| CCATTGAAACTGAGATTAGG+TGG | + | chr2.4:41357229-41357248 | MS.gene036317:CDS | 40.0% | |
| CCTCCTCAGAAATGTGATTA+TGG | + | chr2.4:41356283-41356302 | MS.gene036317:CDS | 40.0% | |
| CTATGTATATTTCCACCCTG+TGG | - | chr2.4:41359880-41359899 | None:intergenic | 40.0% | |
| GAACTACGACATTCATGGAT+GGG | + | chr2.4:41357665-41357684 | MS.gene036317:CDS | 40.0% | |
| GAGAAAGGAGCAATCCTTAT+TGG | - | chr2.4:41359994-41360013 | None:intergenic | 40.0% | |
| GAGGTTTCTTTGATGCAAGT+TGG | + | chr2.4:41357944-41357963 | MS.gene036317:CDS | 40.0% | |
| GCAATGTTTGGATTCACACA+AGG | + | chr2.4:41357328-41357347 | MS.gene036317:CDS | 40.0% | |
| GCAGACGCATTTCTAACAAA+AGG | - | chr2.4:41357310-41357329 | None:intergenic | 40.0% | |
| GGAAAGAACTACGACATTCA+TGG | + | chr2.4:41357660-41357679 | MS.gene036317:CDS | 40.0% | |
| GTACTATCAACTACCTTCTC+AGG | + | chr2.4:41359556-41359575 | MS.gene036317:CDS | 40.0% | |
| GTATCTAACGCCAATACATG+TGG | + | chr2.4:41358588-41358607 | MS.gene036317:intron | 40.0% | |
| TAGTTAATAGGCACCTTGGA+GGG | + | chr2.4:41359080-41359099 | MS.gene036317:intron | 40.0% | |
| TATACCTGATGCTGTTGTTC+CGG | + | chr2.4:41360029-41360048 | MS.gene036317:CDS | 40.0% | |
| TATGGAAAGTCGGTACATCA+TGG | + | chr2.4:41357579-41357598 | MS.gene036317:CDS | 40.0% | |
| TCTTGCTTCTCTTCTCAATC+TGG | + | chr2.4:41356321-41356340 | MS.gene036317:CDS | 40.0% | |
| TGTCAGGCAATGAATTGAGT+GGG | + | chr2.4:41357803-41357822 | MS.gene036317:intron | 40.0% | |
| TTCCCAATCCAGACTACTAT+AGG | + | chr2.4:41358836-41358855 | MS.gene036317:CDS | 40.0% | |
| ! | ATTTTCTTTTCATCTCGCGC+AGG | + | chr2.4:41357042-41357061 | MS.gene036317:intron | 40.0% |
| ! | CCATAATCACATTTCTGAGG+AGG | - | chr2.4:41356286-41356305 | None:intergenic | 40.0% |
| ! | CGTGAGTGTTTTGTGACTAA+TGG | + | chr2.4:41357460-41357479 | MS.gene036317:intron | 40.0% |
| ! | TATAGTAGTCTGGATTGGGA+AGG | - | chr2.4:41358837-41358856 | None:intergenic | 40.0% |
| ! | TCCAAGGTGCCTATTAACTA+CGG | - | chr2.4:41359080-41359099 | None:intergenic | 40.0% |
| ! | TTTGTGCAACTTTGGATTGG+TGG | + | chr2.4:41356260-41356279 | MS.gene036317:CDS | 40.0% |
| !! | CGGTTTTGTCCGTAGTTAAT+AGG | + | chr2.4:41359068-41359087 | MS.gene036317:intron | 40.0% |
| !! | GTCCAGGTTGATCAATAGTA+TGG | - | chr2.4:41359722-41359741 | None:intergenic | 40.0% |
| AAAGTGGTGTAGCAGACTTG+AGG | - | chr2.4:41359007-41359026 | None:intergenic | 45.0% | |
| AGTTCATCCCATCTTGGCAT+TGG | - | chr2.4:41357361-41357380 | None:intergenic | 45.0% | |
| ATGTTCCATGTGTGAGAGGA+AGG | + | chr2.4:41359249-41359268 | MS.gene036317:intron | 45.0% | |
| ATTCATTGCCTGACAGTGAC+AGG | - | chr2.4:41357798-41357817 | None:intergenic | 45.0% | |
| CTGGTCCAAGGCTATAAATG+TGG | - | chr2.4:41358020-41358039 | None:intergenic | 45.0% | |
| CTGTCAGGCAATGAATTGAG+TGG | + | chr2.4:41357802-41357821 | MS.gene036317:intron | 45.0% | |
| CTTGCATCAAAGAAACCTCC+AGG | - | chr2.4:41357943-41357962 | None:intergenic | 45.0% | |
| GAAGGTCCAACTGTTTGTGT+CGG | + | chr2.4:41359267-41359286 | MS.gene036317:intron | 45.0% | |
| GACATTCATGGATGGGAACT+TGG | + | chr2.4:41357672-41357691 | MS.gene036317:CDS | 45.0% | |
| GAGTACCATCTAACTCCACA+GGG | + | chr2.4:41359862-41359881 | MS.gene036317:CDS | 45.0% | |
| GCTAATGTTCCATGTGTGAG+AGG | + | chr2.4:41359245-41359264 | MS.gene036317:intron | 45.0% | |
| GTAGTTAATAGGCACCTTGG+AGG | + | chr2.4:41359079-41359098 | MS.gene036317:intron | 45.0% | |
| GTCAGGCAATGAATTGAGTG+GGG | + | chr2.4:41357804-41357823 | MS.gene036317:intron | 45.0% | |
| GTTCATCCCATCTTGGCATT+GGG | - | chr2.4:41357360-41357379 | None:intergenic | 45.0% | |
| TCAGGCAATGAATTGAGTGG+GGG | + | chr2.4:41357805-41357824 | MS.gene036317:intron | 45.0% | |
| TCCGTAGTTAATAGGCACCT+TGG | + | chr2.4:41359076-41359095 | MS.gene036317:intron | 45.0% | |
| TGCAGACAGAGTTTGATAGG+AGG | + | chr2.4:41358781-41358800 | MS.gene036317:CDS | 45.0% | |
| TGGCAGTTTGCAAGATGAAC+TGG | + | chr2.4:41357249-41357268 | MS.gene036317:CDS | 45.0% | |
| ! | AGAGTACCATCTAACTCCAC+AGG | + | chr2.4:41359861-41359880 | MS.gene036317:CDS | 45.0% |
| ! | CACATTTATAGCCTTGGACC+AGG | + | chr2.4:41358018-41358037 | MS.gene036317:CDS | 45.0% |
| ! | GCTTTTCCGACACAAACAGT+TGG | - | chr2.4:41359276-41359295 | None:intergenic | 45.0% |
| ! | GTCTGGATTGGGAAGGAAAT+TGG | - | chr2.4:41358830-41358849 | None:intergenic | 45.0% |
| ! | TGGATTGGGAAGGAAATTGG+TGG | - | chr2.4:41358827-41358846 | None:intergenic | 45.0% |
| !! | ATCGGTGTTGTTTCCAGTGT+CGG | + | chr2.4:41358644-41358663 | MS.gene036317:intron | 45.0% |
| !! | CTATTAATTAATAAATTAAA+TGG | - | chr2.4:41356959-41356978 | None:intergenic | 5.0% |
| !!! | TTCATTTTTAAAATTATTAT+CGG | + | chr2.4:41358626-41358645 | MS.gene036317:intron | 5.0% |
| AAGCCATTAGTCATTGCGCC+TGG | + | chr2.4:41357922-41357941 | MS.gene036317:CDS | 50.0% | |
| ACAACCGTCGAAGCGACATT+TGG | + | chr2.4:41359748-41359767 | MS.gene036317:CDS | 50.0% | |
| AGGAACCTCAGCAACAGCAT+GGG | + | chr2.4:41358386-41358405 | MS.gene036317:CDS | 50.0% | |
| ATACGACACGTGTTCGACAC+CGG | + | chr2.4:41356550-41356569 | MS.gene036317:intron | 50.0% | |
| CTTGGAGGGTAGATTAGCGT+GGG | + | chr2.4:41359094-41359113 | MS.gene036317:intron | 50.0% | |
| GAGTATTCGAGGTCGGAACA+TGG | + | chr2.4:41359302-41359321 | MS.gene036317:intron | 50.0% | |
| GCACAGATATGGACACGACA+TGG | + | chr2.4:41356451-41356470 | MS.gene036317:intron | 50.0% | |
| GGCGCAATGACTAATGGCTT+AGG | - | chr2.4:41357922-41357941 | None:intergenic | 50.0% | |
| TACCATCTAACTCCACAGGG+TGG | + | chr2.4:41359865-41359884 | MS.gene036317:CDS | 50.0% | |
| TAGCCCACTGTCAAGGCTAA+GGG | + | chr2.4:41359165-41359184 | MS.gene036317:intron | 50.0% | |
| TATGAAGCACGGAGACTCCT+TGG | - | chr2.4:41356588-41356607 | None:intergenic | 50.0% | |
| TCAGGAGGGGCTTATAACAG+TGG | + | chr2.4:41358417-41358436 | MS.gene036317:CDS | 50.0% | |
| TGGTGTAGCAGACTTGAGGT+TGG | - | chr2.4:41359003-41359022 | None:intergenic | 50.0% | |
| TGTCAAGGCTAAGGGGCTAA+AGG | + | chr2.4:41359173-41359192 | MS.gene036317:intron | 50.0% | |
| TTCCACCCTGTGGAGTTAGA+TGG | - | chr2.4:41359870-41359889 | None:intergenic | 50.0% | |
| TTGGACCTTCCTCTCACACA+TGG | - | chr2.4:41359257-41359276 | None:intergenic | 50.0% | |
| ! | ATCGCCAAATGTCGCTTCGA+CGG | - | chr2.4:41359755-41359774 | None:intergenic | 50.0% |
| ! | CCAGGTACTTTTCGCCGAAT+TGG | + | chr2.4:41358036-41358055 | MS.gene036317:intron | 50.0% |
| ! | GGGTCTTGTGTAAGCTGTCA+CGG | + | chr2.4:41359048-41359067 | MS.gene036317:intron | 50.0% |
| ! | TGTCGGTGTTCGACACTTGT+TGG | + | chr2.4:41358566-41358585 | MS.gene036317:intron | 50.0% |
| !! | AGGAGTTGATACGCACCTTG+TGG | + | chr2.4:41358287-41358306 | MS.gene036317:intron | 50.0% |
| !! | CCAATTCGGCGAAAAGTACC+TGG | - | chr2.4:41358039-41358058 | None:intergenic | 50.0% |
| !! | CTTCTTTGGCACCGACTCAT+GGG | + | chr2.4:41359526-41359545 | MS.gene036317:CDS | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGA+CGG | + | chr2.4:41356499-41356518 | MS.gene036317:intron | 50.0% |
| !! | TCGGCATTGGTGTAGTTCCA+AGG | - | chr2.4:41357618-41357637 | None:intergenic | 50.0% |
| !! | TCTTCTTTGGCACCGACTCA+TGG | + | chr2.4:41359525-41359544 | MS.gene036317:CDS | 50.0% |
| ACCAACCCATGCTGTTGCTG+AGG | - | chr2.4:41358394-41358413 | None:intergenic | 55.0% | |
| ACCTCAGCAACAGCATGGGT+TGG | + | chr2.4:41358390-41358409 | MS.gene036317:CDS | 55.0% | |
| AGCCCACTGTCAAGGCTAAG+GGG | + | chr2.4:41359166-41359185 | MS.gene036317:intron | 55.0% | |
| AGCTAGCTCCTGTCACTGTC+AGG | + | chr2.4:41357787-41357806 | MS.gene036317:intron | 55.0% | |
| CAAGCCGGAACAACAGCATC+AGG | - | chr2.4:41360036-41360055 | None:intergenic | 55.0% | |
| CAGGAACCTCAGCAACAGCA+TGG | + | chr2.4:41358385-41358404 | MS.gene036317:CDS | 55.0% | |
| CCACGCTAATCTACCCTCCA+AGG | - | chr2.4:41359096-41359115 | None:intergenic | 55.0% | |
| CCATTAGTCATTGCGCCTGG+AGG | + | chr2.4:41357925-41357944 | MS.gene036317:CDS | 55.0% | |
| CCTCCAGGCGCAATGACTAA+TGG | - | chr2.4:41357928-41357947 | None:intergenic | 55.0% | |
| CCTTGGAGGGTAGATTAGCG+TGG | + | chr2.4:41359093-41359112 | MS.gene036317:intron | 55.0% | |
| GAATTGAGTGGGGGTGGAGT+TGG | + | chr2.4:41357814-41357833 | MS.gene036317:CDS | 55.0% | |
| GCACGGAGACTCCTTGGATT+AGG | - | chr2.4:41356582-41356601 | None:intergenic | 55.0% | |
| GGAACAGTAGCCCACTGTCA+AGG | + | chr2.4:41359158-41359177 | MS.gene036317:intron | 55.0% | |
| GGAACATTAGCGCCGTCTGT+GGG | - | chr2.4:41359236-41359255 | None:intergenic | 55.0% | |
| GGCAATGAATTGAGTGGGGG+TGG | + | chr2.4:41357808-41357827 | MS.gene036317:intron | 55.0% | |
| GTACACCGCTTCCCATGAGT+CGG | - | chr2.4:41359540-41359559 | None:intergenic | 55.0% | |
| GTAGCCCACTGTCAAGGCTA+AGG | + | chr2.4:41359164-41359183 | MS.gene036317:intron | 55.0% | |
| GTATGCACTTGCATGAGCGC+AGG | + | chr2.4:41357431-41357450 | MS.gene036317:intron | 55.0% | |
| GTGCCTCCCAATGCCAAGAT+GGG | + | chr2.4:41357351-41357370 | MS.gene036317:CDS | 55.0% | |
| GTGTCGGACACGACATGTGT+CGG | + | chr2.4:41356521-41356540 | MS.gene036317:intron | 55.0% | |
| TACGACACGTGTTCGACACC+GGG | + | chr2.4:41356551-41356570 | MS.gene036317:intron | 55.0% | |
| TGGAACATTAGCGCCGTCTG+TGG | - | chr2.4:41359237-41359256 | None:intergenic | 55.0% | |
| TGTAGCACAGACACCGACAC+TGG | - | chr2.4:41358660-41358679 | None:intergenic | 55.0% | |
| ! | CATCCCATCTTGGCATTGGG+AGG | - | chr2.4:41357357-41357376 | None:intergenic | 55.0% |
| ! | CGACGGTTGTGTTGTTGTCC+AGG | - | chr2.4:41359738-41359757 | None:intergenic | 55.0% |
| ! | GACACGACATGTGTCGGTGT+CGG | + | chr2.4:41356527-41356546 | MS.gene036317:intron | 55.0% |
| ! | GATGCTGTTGTTCCGGCTTG+CGG | + | chr2.4:41360036-41360055 | MS.gene036317:CDS | 55.0% |
| ! | TCCTTGGATTAGGCGTGTCC+CGG | - | chr2.4:41356572-41356591 | None:intergenic | 55.0% |
| !! | ACAGCATGGGTTGGTGAGTC+AGG | + | chr2.4:41358399-41358418 | MS.gene036317:CDS | 55.0% |
| !! | AGCCCCTTAGCCTTGACAGT+GGG | - | chr2.4:41359171-41359190 | None:intergenic | 55.0% |
| !! | ATGGGTTGGTGAGTCAGGAG+GGG | + | chr2.4:41358404-41358423 | MS.gene036317:CDS | 55.0% |
| !! | CATGGGTTGGTGAGTCAGGA+GGG | + | chr2.4:41358403-41358422 | MS.gene036317:CDS | 55.0% |
| !! | GGCGAAAAGTACCTGGTCCA+AGG | - | chr2.4:41358032-41358051 | None:intergenic | 55.0% |
| !! | TAGCCCCTTAGCCTTGACAG+TGG | - | chr2.4:41359172-41359191 | None:intergenic | 55.0% |
| ACCGGGACACGCCTAATCCA+AGG | + | chr2.4:41356568-41356587 | MS.gene036317:intron | 60.0% | |
| GGTGCCTCCCAATGCCAAGA+TGG | + | chr2.4:41357350-41357369 | MS.gene036317:CDS | 60.0% | |
| !! | GCATGGGTTGGTGAGTCAGG+AGG | + | chr2.4:41358402-41358421 | MS.gene036317:CDS | 60.0% |
| !! | TGGCACCGACTCATGGGAAG+CGG | + | chr2.4:41359532-41359551 | MS.gene036317:CDS | 60.0% |
| !! | TGTCGGTGTCGTGACGGTGT+CGG | + | chr2.4:41356505-41356524 | MS.gene036317:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 41356097 | 41360062 | 41356097 | ID=MS.gene036317 |
| chr2.4 | mRNA | 41356097 | 41360062 | 41356097 | ID=MS.gene036317.t1;Parent=MS.gene036317 |
| chr2.4 | exon | 41356097 | 41356342 | 41356097 | ID=MS.gene036317.t1.exon1;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41356097 | 41356342 | 41356097 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41357064 | 41357100 | 41357064 | ID=MS.gene036317.t1.exon2;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41357064 | 41357100 | 41357064 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41357221 | 41357404 | 41357221 | ID=MS.gene036317.t1.exon3;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41357221 | 41357404 | 41357221 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41357548 | 41357693 | 41357548 | ID=MS.gene036317.t1.exon4;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41357548 | 41357693 | 41357548 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41357809 | 41358039 | 41357809 | ID=MS.gene036317.t1.exon5;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41357809 | 41358039 | 41357809 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41358289 | 41358478 | 41358289 | ID=MS.gene036317.t1.exon6;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41358289 | 41358478 | 41358289 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41358732 | 41358857 | 41358732 | ID=MS.gene036317.t1.exon7;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41358732 | 41358857 | 41358732 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41359522 | 41359621 | 41359522 | ID=MS.gene036317.t1.exon8;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41359522 | 41359621 | 41359522 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| chr2.4 | exon | 41359709 | 41360062 | 41359709 | ID=MS.gene036317.t1.exon9;Parent=MS.gene036317.t1 |
| chr2.4 | CDS | 41359709 | 41360062 | 41359709 | ID=cds.MS.gene036317.t1;Parent=MS.gene036317.t1 |
| Gene Sequence |
| Protein sequence |
