Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063475.t1 | XP_013457959.1 | 94.7 | 548 | 29 | 0 | 1 | 548 | 1 | 548 | 0.00E+00 | 1083.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063475.t1 | Q9FF10 | 60.9 | 550 | 199 | 7 | 1 | 542 | 1 | 542 | 3.2e-202 | 706.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063475.t1 | A0A072V1J6 | 94.7 | 548 | 29 | 0 | 1 | 548 | 1 | 548 | 0.0e+00 | 1083.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063475 | MS.gene69866 | PPI |
| MS.gene69310 | MS.gene063475 | PPI |
| MS.gene033078 | MS.gene063475 | PPI |
| MS.gene036317 | MS.gene063475 | PPI |
| MS.gene95196 | MS.gene063475 | PPI |
| MS.gene033803 | MS.gene063475 | PPI |
| MS.gene063475 | MS.gene057926 | PPI |
| MS.gene51808 | MS.gene063475 | PPI |
| MS.gene036682 | MS.gene063475 | PPI |
| MS.gene95198 | MS.gene063475 | PPI |
| MS.gene057926 | MS.gene063475 | PPI |
| MS.gene57996 | MS.gene063475 | PPI |
| MS.gene044430 | MS.gene063475 | PPI |
| MS.gene69866 | MS.gene063475 | PPI |
| MS.gene063475 | MS.gene95198 | PPI |
| MS.gene50879 | MS.gene063475 | PPI |
| MS.gene057928 | MS.gene063475 | PPI |
| MS.gene063475 | MS.gene95196 | PPI |
| MS.gene041370 | MS.gene063475 | PPI |
| MS.gene78493 | MS.gene063475 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063475.t1 | MTR_4g109300 | 94.708 | 548 | 29 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1058 |
| MS.gene063475.t1 | MTR_4g109300 | 89.175 | 582 | 29 | 1 | 1 | 548 | 1 | 582 | 0.0 | 1040 |
| MS.gene063475.t1 | MTR_4g109300 | 95.358 | 517 | 24 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1006 |
| MS.gene063475.t1 | MTR_4g109300 | 94.293 | 403 | 23 | 0 | 146 | 548 | 1 | 403 | 0.0 | 783 |
| MS.gene063475.t1 | MTR_3g023710 | 67.332 | 551 | 146 | 4 | 1 | 547 | 1 | 521 | 0.0 | 768 |
| MS.gene063475.t1 | MTR_3g023700 | 65.818 | 550 | 156 | 3 | 1 | 548 | 1 | 520 | 0.0 | 750 |
| MS.gene063475.t1 | MTR_3g023690 | 65.631 | 547 | 155 | 4 | 1 | 545 | 1 | 516 | 0.0 | 735 |
| MS.gene063475.t1 | MTR_5g043710 | 50.000 | 536 | 228 | 5 | 9 | 542 | 6 | 503 | 0.0 | 541 |
| MS.gene063475.t1 | MTR_3g023690 | 65.509 | 403 | 107 | 3 | 145 | 545 | 56 | 428 | 0.0 | 536 |
| MS.gene063475.t1 | MTR_2g451510 | 47.723 | 549 | 255 | 10 | 3 | 542 | 11 | 536 | 4.52e-174 | 503 |
| MS.gene063475.t1 | MTR_4g116070 | 47.992 | 523 | 234 | 8 | 25 | 542 | 39 | 528 | 4.81e-155 | 454 |
| MS.gene063475.t1 | MTR_4g116040 | 39.459 | 370 | 176 | 7 | 173 | 542 | 21 | 342 | 1.00e-76 | 246 |
| MS.gene063475.t1 | MTR_4g109260 | 71.795 | 78 | 22 | 0 | 227 | 304 | 59 | 136 | 3.12e-34 | 126 |
| MS.gene063475.t1 | MTR_8g091920 | 28.610 | 367 | 137 | 11 | 172 | 518 | 2 | 263 | 6.55e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063475.t1 | AT5G07830 | 60.909 | 550 | 199 | 7 | 1 | 542 | 1 | 542 | 0.0 | 704 |
| MS.gene063475.t1 | AT5G61250 | 60.367 | 545 | 206 | 4 | 1 | 542 | 1 | 538 | 0.0 | 697 |
| MS.gene063475.t1 | AT5G61250 | 60.367 | 545 | 206 | 4 | 1 | 542 | 1 | 538 | 0.0 | 697 |
| MS.gene063475.t1 | AT5G61250 | 60.367 | 545 | 206 | 4 | 1 | 542 | 1 | 538 | 0.0 | 697 |
| MS.gene063475.t1 | AT5G34940 | 46.801 | 547 | 264 | 5 | 5 | 542 | 7 | 535 | 1.46e-171 | 496 |
| MS.gene063475.t1 | AT5G34940 | 49.734 | 376 | 184 | 2 | 5 | 376 | 7 | 381 | 6.39e-129 | 382 |
| MS.gene063475.t1 | AT5G34940 | 46.651 | 418 | 200 | 4 | 130 | 542 | 1 | 400 | 1.96e-124 | 371 |
| MS.gene063475.t1 | AT5G34940 | 45.397 | 315 | 149 | 4 | 233 | 542 | 2 | 298 | 1.26e-86 | 270 |
Find 125 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCCTTGTTTCTCTTCC+TGG | 0.115486 | 8.4:-18243252 | MS.gene063475:CDS |
| CTCTTCATCTGTTCTCAATT+TGG | 0.128874 | 8.4:-18243075 | MS.gene063475:intron |
| CACTCATCATGTATATAATT+TGG | 0.131943 | 8.4:-18241463 | MS.gene063475:CDS |
| TATTGCAGGCAGACCTTAAT+TGG | 0.188717 | 8.4:-18240986 | MS.gene063475:CDS |
| TTGAGTACTGGATCCAATTT+AGG | 0.234555 | 8.4:+18239974 | None:intergenic |
| CCATCATCTGTTAACTTTAG+TGG | 0.237968 | 8.4:+18240004 | None:intergenic |
| GATAAGCTTCTTGAGGTTTC+AGG | 0.238177 | 8.4:-18241507 | MS.gene063475:CDS |
| TGCAGGGCCATGATGACTTT+TGG | 0.268128 | 8.4:-18241906 | MS.gene063475:intron |
| TGATGGAGAAATTCCTAAAT+TGG | 0.268761 | 8.4:-18239987 | MS.gene063475:CDS |
| CAAAATTAGTCACACTGTTT+GGG | 0.269343 | 8.4:-18241859 | MS.gene063475:CDS |
| ACAAAATTAGTCACACTGTT+TGG | 0.287075 | 8.4:-18241860 | MS.gene063475:CDS |
| GCCATAGTTTCCTCCAATTA+AGG | 0.290989 | 8.4:+18240973 | None:intergenic |
| AAGATGAAAGGTGGATTGTT+TGG | 0.303097 | 8.4:-18242640 | MS.gene063475:CDS |
| ACACATTTGTGGATAGCTTT+TGG | 0.308106 | 8.4:-18241170 | MS.gene063475:intron |
| AGCTATCAGATGTCACATTC+AGG | 0.319283 | 8.4:-18240093 | MS.gene063475:CDS |
| ATGGTCCTTGGTCGGCTGCT+TGG | 0.327136 | 8.4:-18241242 | MS.gene063475:CDS |
| GAAATTGATTCATGGGAGTT+TGG | 0.328046 | 8.4:-18241774 | MS.gene063475:intron |
| ATAGACCTTGGTGTTGTATC+TGG | 0.329634 | 8.4:+18241006 | None:intergenic |
| GCTGCTTGGGTTGGAGAAGC+TGG | 0.363644 | 8.4:-18241228 | MS.gene063475:CDS |
| ATGAAATCATAAGCATTTGT+AGG | 0.373227 | 8.4:+18241822 | None:intergenic |
| ACCTTAATTGGAGGAAACTA+TGG | 0.373504 | 8.4:-18240974 | MS.gene063475:CDS |
| TGGTCCTTGGTCGGCTGCTT+GGG | 0.379161 | 8.4:-18241241 | MS.gene063475:CDS |
| ACTCATCATGTATATAATTT+GGG | 0.394197 | 8.4:-18241462 | MS.gene063475:CDS |
| CTTCTTGAGGTTTCAGGCAC+AGG | 0.398220 | 8.4:-18241501 | MS.gene063475:CDS |
| CTTGGGTTGGAGAAGCTGGC+GGG | 0.399312 | 8.4:-18241224 | MS.gene063475:CDS |
| TCATTTGCGCTACTATTGAT+TGG | 0.400129 | 8.4:-18243139 | MS.gene063475:CDS |
| CCAAGGACCATGTGTTTGAA+TGG | 0.403691 | 8.4:+18241254 | None:intergenic |
| TACACTTGCCTGTAGTAGTC+AGG | 0.410999 | 8.4:+18240920 | None:intergenic |
| TGATAGCTCTCAGGCCTTTG+AGG | 0.412095 | 8.4:-18242741 | MS.gene063475:intron |
| ACAATAAATGCAATAGATAA+AGG | 0.415778 | 8.4:+18239923 | None:intergenic |
| CACTGTTTGGGGAGGAGACT+GGG | 0.416439 | 8.4:-18241847 | MS.gene063475:CDS |
| CAAGCTGGAGCATCAAGGTT+GGG | 0.423704 | 8.4:+18239896 | None:intergenic |
| CCTTGGTCGGCTGCTTGGGT+TGG | 0.431850 | 8.4:-18241237 | MS.gene063475:CDS |
| GTCAGGATTGGGAGTGAAAG+TGG | 0.436774 | 8.4:+18240937 | None:intergenic |
| CCACTAAAGTTAACAGATGA+TGG | 0.441916 | 8.4:-18240004 | MS.gene063475:CDS |
| AAGAATACGAAATTGATTCA+TGG | 0.442797 | 8.4:-18241782 | MS.gene063475:CDS |
| ACCAGGAGGTTTCTATCAAA+AGG | 0.447090 | 8.4:-18241538 | MS.gene063475:CDS |
| ACACTGTTTGGGGAGGAGAC+TGG | 0.447803 | 8.4:-18241848 | MS.gene063475:CDS |
| ATCGAAGTAAACGGAGTTCA+AGG | 0.452048 | 8.4:-18243185 | MS.gene063475:CDS |
| TTGAACTCCGTTTACTTCGA+TGG | 0.454323 | 8.4:+18243187 | None:intergenic |
| GGTAATGAATTGAGTGGTAA+AGG | 0.458190 | 8.4:-18241669 | MS.gene063475:CDS |
| CATGTATATAATTTGGGACC+AGG | 0.472337 | 8.4:-18241456 | MS.gene063475:intron |
| CATGGTTCCATCGAAGTAAA+CGG | 0.477425 | 8.4:-18243194 | MS.gene063475:CDS |
| TTGCCTGTAGTAGTCAGGAT+TGG | 0.480012 | 8.4:+18240925 | None:intergenic |
| CCATTCAAACACATGGTCCT+TGG | 0.480449 | 8.4:-18241254 | MS.gene063475:CDS |
| ACTTATGCCCATTGTTCAAA+AGG | 0.480564 | 8.4:-18240507 | MS.gene063475:CDS |
| TGAAATCATAAGCATTTGTA+GGG | 0.485591 | 8.4:+18241823 | None:intergenic |
| TGCCTGTAGTAGTCAGGATT+GGG | 0.485923 | 8.4:+18240926 | None:intergenic |
| TTACTGTTTCTAAAACAAGC+TGG | 0.489026 | 8.4:+18239881 | None:intergenic |
| TGATGTTTCTGACACATTTG+TGG | 0.489087 | 8.4:-18241181 | MS.gene063475:CDS |
| CTCCCAATCCTGACTACTAC+AGG | 0.491346 | 8.4:-18240928 | MS.gene063475:intron |
| AGAATACGAAATTGATTCAT+GGG | 0.492373 | 8.4:-18241781 | MS.gene063475:CDS |
| GTGACTACAATTATTGCCCC+TGG | 0.494879 | 8.4:-18243100 | MS.gene063475:CDS |
| TGGGATGCTTACACATGAAA+AGG | 0.495260 | 8.4:-18242609 | MS.gene063475:CDS |
| TTTGGCTTGAATGCACTCCA+TGG | 0.503899 | 8.4:-18241888 | MS.gene063475:CDS |
| ACAACACCAAGGTCTATTGC+AGG | 0.505824 | 8.4:-18241000 | MS.gene063475:CDS |
| TTGGCTTGAATGCACTCCAT+GGG | 0.511301 | 8.4:-18241887 | MS.gene063475:CDS |
| GAGGTTTCTATCAAAAGGAA+TGG | 0.511315 | 8.4:-18241533 | MS.gene063475:CDS |
| AGCAAAACCATGTTGCTGAA+TGG | 0.517693 | 8.4:-18240031 | MS.gene063475:CDS |
| TACCTTGTATTGCCTTTGCA+AGG | 0.519151 | 8.4:+18242903 | None:intergenic |
| GTGTTGATGCTGCACAGTAC+GGG | 0.519288 | 8.4:-18241635 | MS.gene063475:CDS |
| ATGGTTACTTGATAGCTCTC+AGG | 0.519664 | 8.4:-18242750 | MS.gene063475:intron |
| GCTTGGGTTGGAGAAGCTGG+CGG | 0.524504 | 8.4:-18241225 | MS.gene063475:CDS |
| TGTATTGCCTTTGCAAGGAT+AGG | 0.525022 | 8.4:+18242908 | None:intergenic |
| TCTACCTTGCTTAAGTGCGC+AGG | 0.525217 | 8.4:+18241303 | None:intergenic |
| GAGAACAGATGAAGAGCCCC+AGG | 0.527394 | 8.4:+18243082 | None:intergenic |
| TTTGCGCTACTATTGATTGG+TGG | 0.527563 | 8.4:-18243136 | MS.gene063475:CDS |
| TGACTACAATTATTGCCCCT+GGG | 0.531853 | 8.4:-18243099 | MS.gene063475:CDS |
| ACAAGCTGGAGCATCAAGGT+TGG | 0.532713 | 8.4:+18239895 | None:intergenic |
| CCTTTGAGGATAAGAGTTGG+AGG | 0.533950 | 8.4:-18242727 | MS.gene063475:CDS |
| CAACAATTTCAAAAGATGAA+AGG | 0.535454 | 8.4:-18242652 | MS.gene063475:CDS |
| GCTATCAGATGTCACATTCA+GGG | 0.537165 | 8.4:-18240092 | MS.gene063475:CDS |
| GAATATACACTATTGAGTAC+TGG | 0.537456 | 8.4:+18239962 | None:intergenic |
| AAGCTGGAGCATCAAGGTTG+GGG | 0.539957 | 8.4:+18239897 | None:intergenic |
| TGCAGGCAGACCTTAATTGG+AGG | 0.544879 | 8.4:-18240983 | MS.gene063475:CDS |
| GCAAGACCGAGTGCTGTATG+AGG | 0.545556 | 8.4:-18242698 | MS.gene063475:CDS |
| ATCCTTGCAAAGGCAATACA+AGG | 0.545859 | 8.4:-18242905 | MS.gene063475:intron |
| TTGGGTTGGAGAAGCTGGCG+GGG | 0.549573 | 8.4:-18241223 | MS.gene063475:CDS |
| TGGCATAAGCTTATGGGGAA+AGG | 0.557644 | 8.4:-18240573 | MS.gene063475:CDS |
| GTCTAATCCTATCCTTGCAA+AGG | 0.563157 | 8.4:-18242915 | MS.gene063475:CDS |
| TAAAACAAGCTGGAGCATCA+AGG | 0.564524 | 8.4:+18239891 | None:intergenic |
| AGTGTTGATGCTGCACAGTA+CGG | 0.569712 | 8.4:-18241636 | MS.gene063475:CDS |
| AAATCAAACGAAGAGAAACC+AGG | 0.578290 | 8.4:+18243234 | None:intergenic |
| CATTCATTAATCAACTCAAG+AGG | 0.579184 | 8.4:-18240138 | MS.gene063475:CDS |
| CCTCCTGGTGCTATAAGTGA+TGG | 0.580527 | 8.4:+18241552 | None:intergenic |
| TATAAGTGATGGTTTGAACT+TGG | 0.581272 | 8.4:+18241563 | None:intergenic |
| TGAAAGTGGTGACATTAAGA+AGG | 0.582569 | 8.4:+18240951 | None:intergenic |
| AATGAATGAATTATCTATGT+GGG | 0.584815 | 8.4:+18240153 | None:intergenic |
| AGGCCTTTGAGGATAAGAGT+TGG | 0.586029 | 8.4:-18242730 | MS.gene063475:CDS |
| GGCGGGGCATTCAACAGTGG+TGG | 0.587450 | 8.4:-18241207 | MS.gene063475:CDS |
| TTCCTACCTCATACAGCACT+CGG | 0.589704 | 8.4:+18242692 | None:intergenic |
| ATTCAAGCCAAAAGTCATCA+TGG | 0.593934 | 8.4:+18241899 | None:intergenic |
| ATTCATTAATCAACTCAAGA+GGG | 0.594118 | 8.4:-18240137 | MS.gene063475:CDS |
| GAATTGAGTGGTAAAGGCAT+CGG | 0.596750 | 8.4:-18241663 | MS.gene063475:CDS |
| AAAATTAGTCACACTGTTTG+GGG | 0.597978 | 8.4:-18241858 | MS.gene063475:CDS |
| CAATTTCAAAAGATGAAAGG+TGG | 0.600121 | 8.4:-18242649 | MS.gene063475:CDS |
| TTGTAGTCACACTTATCTTG+AGG | 0.600422 | 8.4:+18243113 | None:intergenic |
| GCTTGAATGCACTCCATGGG+AGG | 0.602432 | 8.4:-18241884 | MS.gene063475:CDS |
| CCTCCAACTCTTATCCTCAA+AGG | 0.605128 | 8.4:+18242727 | None:intergenic |
| TGGACTACCATTCAGCAACA+TGG | 0.605541 | 8.4:+18240024 | None:intergenic |
| TCAAACACATGGTCCTTGGT+CGG | 0.613086 | 8.4:-18241250 | MS.gene063475:CDS |
| GGTCTGCCTGCAATAGACCT+TGG | 0.615200 | 8.4:+18240994 | None:intergenic |
| CATATAGGTAATGAATTGAG+TGG | 0.618353 | 8.4:-18241675 | MS.gene063475:intron |
| CCAACCCAAGCAGCCGACCA+AGG | 0.618948 | 8.4:+18241237 | None:intergenic |
| GATGCTTACACATGAAAAGG+TGG | 0.621026 | 8.4:-18242606 | MS.gene063475:CDS |
| ATGGTTTGATAAGCTTCTTG+AGG | 0.622444 | 8.4:-18241514 | MS.gene063475:CDS |
| AGATCCTGCGCACTTAAGCA+AGG | 0.625009 | 8.4:-18241307 | MS.gene063475:CDS |
| GACTACAATTATTGCCCCTG+GGG | 0.626301 | 8.4:-18243098 | MS.gene063475:CDS |
| AGAAACCAGGAAGAGAAACA+AGG | 0.628706 | 8.4:+18243247 | None:intergenic |
| TCAACTCAAGATATTGAACA+TGG | 0.630831 | 8.4:-18243212 | MS.gene063475:CDS |
| TCAGAAACCATTCAAACACA+TGG | 0.631922 | 8.4:-18241261 | MS.gene063475:CDS |
| TGTAGGTACTTAGATCAACT+CGG | 0.632829 | 8.4:-18241037 | MS.gene063475:intron |
| TAATGAATGAATTATCTATG+TGG | 0.634240 | 8.4:+18240152 | None:intergenic |
| ATTAGTCACACTGTTTGGGG+AGG | 0.644368 | 8.4:-18241855 | MS.gene063475:CDS |
| AAACCATCACTTATAGCACC+AGG | 0.645834 | 8.4:-18241555 | MS.gene063475:CDS |
| GACCGAGTGCTGTATGAGGT+AGG | 0.656808 | 8.4:-18242694 | MS.gene063475:CDS |
| AGAACAGATGAAGAGCCCCA+GGG | 0.657039 | 8.4:+18243083 | None:intergenic |
| GGAAGAGAAACAAGGCAAGG+TGG | 0.665239 | 8.4:+18243255 | None:intergenic |
| CCAGGAAGAGAAACAAGGCA+AGG | 0.670315 | 8.4:+18243252 | None:intergenic |
| GCTGGCGGGGCATTCAACAG+TGG | 0.677810 | 8.4:-18241210 | MS.gene063475:CDS |
| ATGCTTACACATGAAAAGGT+GGG | 0.687081 | 8.4:-18242605 | MS.gene063475:CDS |
| GAACAGATGAAGAGCCCCAG+GGG | 0.708698 | 8.4:+18243084 | None:intergenic |
| ATCAGATGTCACATTCAGGG+AGG | 0.730151 | 8.4:-18240089 | MS.gene063475:CDS |
| CCATCACTTATAGCACCAGG+AGG | 0.730152 | 8.4:-18241552 | MS.gene063475:CDS |
| AGCATCCAGATACAACACCA+AGG | 0.744343 | 8.4:-18241011 | MS.gene063475:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATGTAAAATGA+AGG | - | chr8.4:18242245-18242264 | MS.gene063475:intron | 10.0% |
| !!! | ATGAAAAATAATTTTTTGTT+AGG | - | chr8.4:18242422-18242441 | MS.gene063475:intron | 10.0% |
| !!! | TGAAAAATAATTTTTTGTTA+GGG | - | chr8.4:18242423-18242442 | MS.gene063475:intron | 10.0% |
| !! | CTGAAATTTAAATTAATTGT+AGG | - | chr8.4:18242083-18242102 | MS.gene063475:intron | 15.0% |
| !!! | AAAAATAATTTTTTGTTAGG+GGG | - | chr8.4:18242425-18242444 | MS.gene063475:intron | 15.0% |
| !!! | AAATTGTTGAAGAATTTTAA+GGG | - | chr8.4:18242299-18242318 | MS.gene063475:intron | 15.0% |
| !!! | AATCATTTTTTCAAAAATAC+AGG | - | chr8.4:18240563-18240582 | MS.gene063475:CDS | 15.0% |
| !!! | AATCTTGGAATATTTATTTT+AGG | - | chr8.4:18240343-18240362 | MS.gene063475:intron | 15.0% |
| !!! | ATCATTTTTTCAAAAATACA+GGG | - | chr8.4:18240564-18240583 | MS.gene063475:CDS | 15.0% |
| !!! | GAAAAATAATTTTTTGTTAG+GGG | - | chr8.4:18242424-18242443 | MS.gene063475:intron | 15.0% |
| !!! | TAAATGATTTGTTTTTGTTT+AGG | - | chr8.4:18241777-18241796 | MS.gene063475:CDS | 15.0% |
| !!! | TAAATTGTTGAAGAATTTTA+AGG | - | chr8.4:18242298-18242317 | MS.gene063475:intron | 15.0% |
| !!! | TTATGCTTTATTTTGTAAAA+AGG | - | chr8.4:18242048-18242067 | MS.gene063475:intron | 15.0% |
| !! | AAGAAATTAAGAATGGTTAT+AGG | + | chr8.4:18242841-18242860 | None:intergenic | 20.0% |
| !! | AATGAATGAATTATCTATGT+GGG | + | chr8.4:18242987-18243006 | None:intergenic | 20.0% |
| !! | ACAAAAAAATGAACACAAAA+TGG | + | chr8.4:18242015-18242034 | None:intergenic | 20.0% |
| !! | ACAATAAATGCAATAGATAA+AGG | + | chr8.4:18243217-18243236 | None:intergenic | 20.0% |
| !! | ACTCATCATGTATATAATTT+GGG | - | chr8.4:18241675-18241694 | MS.gene063475:intron | 20.0% |
| !! | AGAGTTTGAAAAGTTAAATT+AGG | - | chr8.4:18240662-18240681 | MS.gene063475:intron | 20.0% |
| !! | TAATGAATGAATTATCTATG+TGG | + | chr8.4:18242988-18243007 | None:intergenic | 20.0% |
| !! | TGATGTTATTCTTTCTATAA+TGG | - | chr8.4:18240368-18240387 | MS.gene063475:intron | 20.0% |
| !!! | AATTTCGTATTCTTTTGATA+TGG | + | chr8.4:18241349-18241368 | None:intergenic | 20.0% |
| !!! | ATAAATCTAATCCTATGTTT+TGG | - | chr8.4:18242515-18242534 | MS.gene063475:intron | 20.0% |
| !!! | CATTTTTTTGTGCTAAATTA+AGG | - | chr8.4:18242024-18242043 | MS.gene063475:intron | 20.0% |
| !!! | GTCTTTTTTATTAGAATATG+AGG | - | chr8.4:18242378-18242397 | MS.gene063475:intron | 20.0% |
| !!! | TTTAGTTCTTGAAATTGTAA+AGG | - | chr8.4:18240845-18240864 | MS.gene063475:intron | 20.0% |
| ! | AAAAAATGAACACAAAATGG+TGG | + | chr8.4:18242012-18242031 | None:intergenic | 25.0% |
| ! | AAAGCAAGGTTGAATATAAA+TGG | - | chr8.4:18242356-18242375 | MS.gene063475:intron | 25.0% |
| ! | AAATTAAGAATGGTTATAGG+AGG | + | chr8.4:18242838-18242857 | None:intergenic | 25.0% |
| ! | AACAAATCATTTAAACCTGT+AGG | + | chr8.4:18241770-18241789 | None:intergenic | 25.0% |
| ! | AATGATAACTCAATGTTGAT+TGG | - | chr8.4:18240186-18240205 | MS.gene063475:CDS | 25.0% |
| ! | AATTGCCCATACATATTATA+GGG | + | chr8.4:18242490-18242509 | None:intergenic | 25.0% |
| ! | AGGATGAAAGAAATTAAGAA+TGG | + | chr8.4:18242848-18242867 | None:intergenic | 25.0% |
| ! | ATGAAATCATAAGCATTTGT+AGG | + | chr8.4:18241318-18241337 | None:intergenic | 25.0% |
| ! | ATTCATTAATCAACTCAAGA+GGG | - | chr8.4:18243000-18243019 | MS.gene063475:intron | 25.0% |
| ! | CAAAATCAAATCCAAAACAT+AGG | + | chr8.4:18242529-18242548 | None:intergenic | 25.0% |
| ! | CAACAATTTCAAAAGATGAA+AGG | - | chr8.4:18240485-18240504 | MS.gene063475:intron | 25.0% |
| ! | CACTCATCATGTATATAATT+TGG | - | chr8.4:18241674-18241693 | MS.gene063475:intron | 25.0% |
| ! | CTTATAACAATATATGCAAG+TGG | - | chr8.4:18241147-18241166 | MS.gene063475:intron | 25.0% |
| ! | TAAACAGAAACAGTTTCATT+TGG | + | chr8.4:18240793-18240812 | None:intergenic | 25.0% |
| ! | TAAATTAGGTTCTCTTATGT+AGG | - | chr8.4:18240676-18240695 | MS.gene063475:intron | 25.0% |
| ! | TAATTGCCCATACATATTAT+AGG | + | chr8.4:18242491-18242510 | None:intergenic | 25.0% |
| ! | TCTCAATTTGGTTAGTATTT+AGG | - | chr8.4:18240074-18240093 | MS.gene063475:CDS | 25.0% |
| ! | TGAAATCATAAGCATTTGTA+GGG | + | chr8.4:18241317-18241336 | None:intergenic | 25.0% |
| ! | TTATGTCAACTCTATTTCAT+TGG | - | chr8.4:18241417-18241436 | MS.gene063475:intron | 25.0% |
| ! | TTGAATTTAACTCAACACAT+TGG | - | chr8.4:18242806-18242825 | MS.gene063475:intron | 25.0% |
| ! | TTTACTAGTAGTATCAATCT+TGG | - | chr8.4:18240328-18240347 | MS.gene063475:intron | 25.0% |
| !! | AACTTTTCAAACTCTTACTT+TGG | + | chr8.4:18240657-18240676 | None:intergenic | 25.0% |
| !! | AAGAATACGAAATTGATTCA+TGG | - | chr8.4:18241355-18241374 | MS.gene063475:intron | 25.0% |
| !! | ACATTGTTTCTTAGATCATA+TGG | + | chr8.4:18240285-18240304 | None:intergenic | 25.0% |
| !! | AGAATACGAAATTGATTCAT+GGG | - | chr8.4:18241356-18241375 | MS.gene063475:intron | 25.0% |
| !! | ATTTAGCACCACAATTTTAA+AGG | - | chr8.4:18240941-18240960 | MS.gene063475:CDS | 25.0% |
| !! | ATTTGTTAGAATATTCCTAC+AGG | - | chr8.4:18241752-18241771 | MS.gene063475:intron | 25.0% |
| !! | TAAAATTGTGGTGCTAAATT+TGG | + | chr8.4:18240940-18240959 | None:intergenic | 25.0% |
| !!! | AGGTGTTTTATTGATTTTGA+TGG | - | chr8.4:18241011-18241030 | MS.gene063475:CDS | 25.0% |
| !!! | CTTTCATCTTTTGAAATTGT+TGG | + | chr8.4:18240487-18240506 | None:intergenic | 25.0% |
| !!! | GTTTTATTGATTTTGATGGA+AGG | - | chr8.4:18241015-18241034 | MS.gene063475:CDS | 25.0% |
| !!! | TAAAAATGCATTGCTGTTTT+AGG | + | chr8.4:18240312-18240331 | None:intergenic | 25.0% |
| AAAATTAGTCACACTGTTTG+GGG | - | chr8.4:18241279-18241298 | MS.gene063475:CDS | 30.0% | |
| AAATTTGAGAGACAATTTCG+TGG | - | chr8.4:18241089-18241108 | MS.gene063475:intron | 30.0% | |
| ACAAAATTAGTCACACTGTT+TGG | - | chr8.4:18241277-18241296 | MS.gene063475:CDS | 30.0% | |
| ACTTAGAATTTATCACTTGC+AGG | - | chr8.4:18241214-18241233 | MS.gene063475:CDS | 30.0% | |
| CAAAATTAGTCACACTGTTT+GGG | - | chr8.4:18241278-18241297 | MS.gene063475:CDS | 30.0% | |
| CAATTTCAAAAGATGAAAGG+TGG | - | chr8.4:18240488-18240507 | MS.gene063475:intron | 30.0% | |
| CACTCAATTCATTACCTATA+TGG | + | chr8.4:18241464-18241483 | None:intergenic | 30.0% | |
| CATATAGGTAATGAATTGAG+TGG | - | chr8.4:18241462-18241481 | MS.gene063475:CDS | 30.0% | |
| CATTCATTAATCAACTCAAG+AGG | - | chr8.4:18242999-18243018 | MS.gene063475:intron | 30.0% | |
| CTTAGAATTTATCACTTGCA+GGG | - | chr8.4:18241215-18241234 | MS.gene063475:CDS | 30.0% | |
| GAATATACACTATTGAGTAC+TGG | + | chr8.4:18243178-18243197 | None:intergenic | 30.0% | |
| GACTATTAAAGTCAATAAGC+AGG | - | chr8.4:18240991-18241010 | MS.gene063475:CDS | 30.0% | |
| TATAAGTGATGGTTTGAACT+TGG | + | chr8.4:18241577-18241596 | None:intergenic | 30.0% | |
| TCAACTCAAGATATTGAACA+TGG | - | chr8.4:18239925-18239944 | MS.gene063475:CDS | 30.0% | |
| TCTGCTATAGTCATTAATTG+AGG | - | chr8.4:18241718-18241737 | MS.gene063475:intron | 30.0% | |
| TGATGGAGAAATTCCTAAAT+TGG | - | chr8.4:18243150-18243169 | MS.gene063475:CDS | 30.0% | |
| ! | AGAAGTACATTATGACAATG+AGG | - | chr8.4:18240812-18240831 | MS.gene063475:intron | 30.0% |
| ! | GGATTGTTTGGATTTTCAAT+GGG | - | chr8.4:18240509-18240528 | MS.gene063475:CDS | 30.0% |
| ! | GTGACTAAATTGACTTTAAG+CGG | + | chr8.4:18240913-18240932 | None:intergenic | 30.0% |
| ! | TGGATTGTTTGGATTTTCAA+TGG | - | chr8.4:18240508-18240527 | MS.gene063475:CDS | 30.0% |
| ! | TTTTAGTCCTCGAAATTGTA+AGG | + | chr8.4:18241115-18241134 | None:intergenic | 30.0% |
| !! | ACAGAGAACCTTTAAAATTG+TGG | + | chr8.4:18240952-18240971 | None:intergenic | 30.0% |
| !! | CAACATGGTTTTGCTTTTAA+GGG | + | chr8.4:18243101-18243120 | None:intergenic | 30.0% |
| !! | CAGAAAAATCACTTTTATGC+TGG | - | chr8.4:18241190-18241209 | MS.gene063475:CDS | 30.0% |
| !! | TGTTGAAGAATTTTAAGGGT+CGG | - | chr8.4:18242303-18242322 | MS.gene063475:intron | 30.0% |
| !! | TTACTGTTTCTAAAACAAGC+TGG | + | chr8.4:18243259-18243278 | None:intergenic | 30.0% |
| !! | TTGCTATTTCGCAAACTTAA+AGG | + | chr8.4:18240885-18240904 | None:intergenic | 30.0% |
| !!! | ATCTTTTGAAATTGTTGGCA+AGG | + | chr8.4:18240482-18240501 | None:intergenic | 30.0% |
| !!! | CATTATCTTTTGGTGTTAAG+TGG | + | chr8.4:18243078-18243097 | None:intergenic | 30.0% |
| !!! | CTTTTAAGGGCATTATCTTT+TGG | + | chr8.4:18243088-18243107 | None:intergenic | 30.0% |
| !!! | TCTTTTGAAATTGTTGGCAA+GGG | + | chr8.4:18240481-18240500 | None:intergenic | 30.0% |
| AAACTCTTACTTTGGCAAGA+AGG | + | chr8.4:18240649-18240668 | None:intergenic | 35.0% | |
| AAATCAAACGAAGAGAAACC+AGG | + | chr8.4:18239906-18239925 | None:intergenic | 35.0% | |
| AATAAGTGGAGCTTAAAGCA+AGG | - | chr8.4:18242342-18242361 | MS.gene063475:intron | 35.0% | |
| ACCTTAATTGGAGGAAACTA+TGG | - | chr8.4:18242163-18242182 | MS.gene063475:intron | 35.0% | |
| ACTTATGCCCATTGTTCAAA+AGG | - | chr8.4:18242630-18242649 | MS.gene063475:CDS | 35.0% | |
| ATGCTTACACATGAAAAGGT+GGG | - | chr8.4:18240532-18240551 | MS.gene063475:CDS | 35.0% | |
| ATGGTTTGATAAGCTTCTTG+AGG | - | chr8.4:18241623-18241642 | MS.gene063475:CDS | 35.0% | |
| ATGTCAAATGTTAGTGTGCA+GGG | + | chr8.4:18242723-18242742 | None:intergenic | 35.0% | |
| ATTAGGTTCTCTTATGTAGG+AGG | - | chr8.4:18240679-18240698 | MS.gene063475:intron | 35.0% | |
| ATTCAAGCCAAAAGTCATCA+TGG | + | chr8.4:18241241-18241260 | None:intergenic | 35.0% | |
| CAGAAAGAACTATGTAAACC+TGG | + | chr8.4:18241702-18241721 | None:intergenic | 35.0% | |
| CCACTAAAGTTAACAGATGA+TGG | - | chr8.4:18243133-18243152 | MS.gene063475:CDS | 35.0% | |
| CCATCATCTGTTAACTTTAG+TGG | + | chr8.4:18243136-18243155 | None:intergenic | 35.0% | |
| CTCTTCATCTGTTCTCAATT+TGG | - | chr8.4:18240062-18240081 | MS.gene063475:CDS | 35.0% | |
| CTTAATTTCTTTCATCCTGC+AGG | - | chr8.4:18242850-18242869 | MS.gene063475:intron | 35.0% | |
| GAGGTTTCTATCAAAAGGAA+TGG | - | chr8.4:18241604-18241623 | MS.gene063475:CDS | 35.0% | |
| GGTAATGAATTGAGTGGTAA+AGG | - | chr8.4:18241468-18241487 | MS.gene063475:CDS | 35.0% | |
| TATGTCAAATGTTAGTGTGC+AGG | + | chr8.4:18242724-18242743 | None:intergenic | 35.0% | |
| TCAGAAACCATTCAAACACA+TGG | - | chr8.4:18241876-18241895 | MS.gene063475:CDS | 35.0% | |
| TCATTTGCGCTACTATTGAT+TGG | - | chr8.4:18239998-18240017 | MS.gene063475:CDS | 35.0% | |
| TGAAAGTGGTGACATTAAGA+AGG | + | chr8.4:18242189-18242208 | None:intergenic | 35.0% | |
| TGGGCATAAGTTCGTAAAAA+TGG | + | chr8.4:18242621-18242640 | None:intergenic | 35.0% | |
| TGTAGGTACTTAGATCAACT+CGG | - | chr8.4:18242100-18242119 | MS.gene063475:intron | 35.0% | |
| TTAGGTTCTCTTATGTAGGA+GGG | - | chr8.4:18240680-18240699 | MS.gene063475:intron | 35.0% | |
| TTGTAGTCACACTTATCTTG+AGG | + | chr8.4:18240027-18240046 | None:intergenic | 35.0% | |
| ! | AATGAACACAAAATGGTGGA+AGG | + | chr8.4:18242008-18242027 | None:intergenic | 35.0% |
| ! | ACACATTTGTGGATAGCTTT+TGG | - | chr8.4:18241967-18241986 | MS.gene063475:intron | 35.0% |
| ! | ACTTTTGTGGCATAAGCTTA+TGG | - | chr8.4:18242557-18242576 | MS.gene063475:intron | 35.0% |
| ! | CATGTATATAATTTGGGACC+AGG | - | chr8.4:18241681-18241700 | MS.gene063475:intron | 35.0% |
| ! | CTTTTGTGGCATAAGCTTAT+GGG | - | chr8.4:18242558-18242577 | MS.gene063475:intron | 35.0% |
| ! | GAAATTGATTCATGGGAGTT+TGG | - | chr8.4:18241363-18241382 | MS.gene063475:intron | 35.0% |
| ! | TACTCTGCCTTTTGAACAAT+GGG | + | chr8.4:18242640-18242659 | None:intergenic | 35.0% |
| ! | TGATGTTTCTGACACATTTG+TGG | - | chr8.4:18241956-18241975 | MS.gene063475:intron | 35.0% |
| ! | TTACTCTGCCTTTTGAACAA+TGG | + | chr8.4:18242641-18242660 | None:intergenic | 35.0% |
| ! | TTTTGTGGCATAAGCTTATG+GGG | - | chr8.4:18242559-18242578 | MS.gene063475:intron | 35.0% |
| !! | AAGATGAAAGGTGGATTGTT+TGG | - | chr8.4:18240497-18240516 | MS.gene063475:intron | 35.0% |
| !! | GCAACATGGTTTTGCTTTTA+AGG | + | chr8.4:18243102-18243121 | None:intergenic | 35.0% |
| !! | TTGAGTACTGGATCCAATTT+AGG | + | chr8.4:18243166-18243185 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATTGTTGGCAAG+GGG | + | chr8.4:18240480-18240499 | None:intergenic | 35.0% |
| !!! | GGATAGCTTTTGGTAATGTT+TGG | - | chr8.4:18241977-18241996 | MS.gene063475:intron | 35.0% |
| !!! | TCAATGTTGATTGGCTTTTC+AGG | - | chr8.4:18240195-18240214 | MS.gene063475:CDS | 35.0% |
| !!! | TGCTATCACTTTTTGTAGCT+TGG | - | chr8.4:18240761-18240780 | MS.gene063475:intron | 35.0% |
| AAACCATCACTTATAGCACC+AGG | - | chr8.4:18241582-18241601 | MS.gene063475:CDS | 40.0% | |
| ACCAGGAGGTTTCTATCAAA+AGG | - | chr8.4:18241599-18241618 | MS.gene063475:CDS | 40.0% | |
| AGAAACCAGGAAGAGAAACA+AGG | + | chr8.4:18239893-18239912 | None:intergenic | 40.0% | |
| AGCAAAACCATGTTGCTGAA+TGG | - | chr8.4:18243106-18243125 | MS.gene063475:CDS | 40.0% | |
| AGCTATCAGATGTCACATTC+AGG | - | chr8.4:18243044-18243063 | MS.gene063475:intron | 40.0% | |
| ATCCTTGCAAAGGCAATACA+AGG | - | chr8.4:18240232-18240251 | MS.gene063475:CDS | 40.0% | |
| ATCGAAGTAAACGGAGTTCA+AGG | - | chr8.4:18239952-18239971 | MS.gene063475:CDS | 40.0% | |
| ATTTCTTTCATCCTGCAGGA+TGG | - | chr8.4:18242854-18242873 | MS.gene063475:intron | 40.0% | |
| CATGGTTCCATCGAAGTAAA+CGG | - | chr8.4:18239943-18239962 | MS.gene063475:CDS | 40.0% | |
| CTTTGGCAAGAAGGAAAAAG+AGG | + | chr8.4:18240640-18240659 | None:intergenic | 40.0% | |
| GATAAGCTTCTTGAGGTTTC+AGG | - | chr8.4:18241630-18241649 | MS.gene063475:CDS | 40.0% | |
| GATGCTTACACATGAAAAGG+TGG | - | chr8.4:18240531-18240550 | MS.gene063475:CDS | 40.0% | |
| GCCAGCCCTATAATATGTAT+GGG | - | chr8.4:18242482-18242501 | MS.gene063475:intron | 40.0% | |
| GCCATAGTTTCCTCCAATTA+AGG | + | chr8.4:18242167-18242186 | None:intergenic | 40.0% | |
| GCTATCAGATGTCACATTCA+GGG | - | chr8.4:18243045-18243064 | MS.gene063475:intron | 40.0% | |
| GTCTAATCCTATCCTTGCAA+AGG | - | chr8.4:18240222-18240241 | MS.gene063475:CDS | 40.0% | |
| TACCTTGTATTGCCTTTGCA+AGG | + | chr8.4:18240237-18240256 | None:intergenic | 40.0% | |
| TATTGCAGGCAGACCTTAAT+TGG | - | chr8.4:18242151-18242170 | MS.gene063475:intron | 40.0% | |
| TGACTACAATTATTGCCCCT+GGG | - | chr8.4:18240038-18240057 | MS.gene063475:CDS | 40.0% | |
| TGGGATGCTTACACATGAAA+AGG | - | chr8.4:18240528-18240547 | MS.gene063475:CDS | 40.0% | |
| TGTATTGCCTTTGCAAGGAT+AGG | + | chr8.4:18240232-18240251 | None:intergenic | 40.0% | |
| TTCTTTGCATGCTGCCATAT+AGG | - | chr8.4:18241447-18241466 | MS.gene063475:intron | 40.0% | |
| TTGAACTCCGTTTACTTCGA+TGG | + | chr8.4:18239953-18239972 | None:intergenic | 40.0% | |
| ! | ATGGTTACTTGATAGCTCTC+AGG | - | chr8.4:18240387-18240406 | MS.gene063475:intron | 40.0% |
| ! | GAATTGAGTGGTAAAGGCAT+CGG | - | chr8.4:18241474-18241493 | MS.gene063475:CDS | 40.0% |
| ! | TAAAACAAGCTGGAGCATCA+AGG | + | chr8.4:18243249-18243268 | None:intergenic | 40.0% |
| ! | TCCTTTTGATAGAAACCTCC+TGG | + | chr8.4:18241603-18241622 | None:intergenic | 40.0% |
| ! | TTTGCGCTACTATTGATTGG+TGG | - | chr8.4:18240001-18240020 | MS.gene063475:CDS | 40.0% |
| ! | TTTTGAGCAGTGCACTTTTG+TGG | - | chr8.4:18242544-18242563 | MS.gene063475:intron | 40.0% |
| !! | ATAGACCTTGGTGTTGTATC+TGG | + | chr8.4:18242134-18242153 | None:intergenic | 40.0% |
| !! | ATATTATAGGGCTGGCCTAA+GGG | + | chr8.4:18242478-18242497 | None:intergenic | 40.0% |
| !!! | AACTCAAGAGGGCATTTTCT+TGG | - | chr8.4:18243011-18243030 | MS.gene063475:intron | 40.0% |
| !!! | ACTCAAGAGGGCATTTTCTT+GGG | - | chr8.4:18243012-18243031 | MS.gene063475:intron | 40.0% |
| ACAACACCAAGGTCTATTGC+AGG | - | chr8.4:18242137-18242156 | MS.gene063475:intron | 45.0% | |
| AGCATCCAGATACAACACCA+AGG | - | chr8.4:18242126-18242145 | MS.gene063475:intron | 45.0% | |
| ATCAGATGTCACATTCAGGG+AGG | - | chr8.4:18243048-18243067 | MS.gene063475:intron | 45.0% | |
| ATTAGTCACACTGTTTGGGG+AGG | - | chr8.4:18241282-18241301 | MS.gene063475:CDS | 45.0% | |
| CCAAGGACCATGTGTTTGAA+TGG | + | chr8.4:18241886-18241905 | None:intergenic | 45.0% | |
| CCATTCAAACACATGGTCCT+TGG | - | chr8.4:18241883-18241902 | MS.gene063475:CDS | 45.0% | |
| CCTCCAACTCTTATCCTCAA+AGG | + | chr8.4:18240413-18240432 | None:intergenic | 45.0% | |
| GACTACAATTATTGCCCCTG+GGG | - | chr8.4:18240039-18240058 | MS.gene063475:CDS | 45.0% | |
| GCCCATACATATTATAGGGC+TGG | + | chr8.4:18242486-18242505 | None:intergenic | 45.0% | |
| GGCCAGCCCTATAATATGTA+TGG | - | chr8.4:18242481-18242500 | MS.gene063475:intron | 45.0% | |
| GTATTGTTACTCCATCCTGC+AGG | + | chr8.4:18242868-18242887 | None:intergenic | 45.0% | |
| GTGACTACAATTATTGCCCC+TGG | - | chr8.4:18240037-18240056 | MS.gene063475:CDS | 45.0% | |
| TACACTTGCCTGTAGTAGTC+AGG | + | chr8.4:18242220-18242239 | None:intergenic | 45.0% | |
| TCAAACACATGGTCCTTGGT+CGG | - | chr8.4:18241887-18241906 | MS.gene063475:CDS | 45.0% | |
| TGCCTGTAGTAGTCAGGATT+GGG | + | chr8.4:18242214-18242233 | None:intergenic | 45.0% | |
| TGGACTACCATTCAGCAACA+TGG | + | chr8.4:18243116-18243135 | None:intergenic | 45.0% | |
| TGGCATAAGCTTATGGGGAA+AGG | - | chr8.4:18242564-18242583 | MS.gene063475:intron | 45.0% | |
| TTCCTACCTCATACAGCACT+CGG | + | chr8.4:18240448-18240467 | None:intergenic | 45.0% | |
| TTGCCTGTAGTAGTCAGGAT+TGG | + | chr8.4:18242215-18242234 | None:intergenic | 45.0% | |
| ! | AGGCCTTTGAGGATAAGAGT+TGG | - | chr8.4:18240407-18240426 | MS.gene063475:intron | 45.0% |
| ! | CCTTTGAGGATAAGAGTTGG+AGG | - | chr8.4:18240410-18240429 | MS.gene063475:intron | 45.0% |
| ! | GACTAATTTTGTGCCTCCCA+TGG | + | chr8.4:18241269-18241288 | None:intergenic | 45.0% |
| ! | TTCGTGGCCTTACAATTTCG+AGG | - | chr8.4:18241105-18241124 | MS.gene063475:intron | 45.0% |
| ! | TTGGCTTGAATGCACTCCAT+GGG | - | chr8.4:18241250-18241269 | MS.gene063475:CDS | 45.0% |
| !! | AGTGTTGATGCTGCACAGTA+CGG | - | chr8.4:18241501-18241520 | MS.gene063475:CDS | 45.0% |
| !! | CATATTATAGGGCTGGCCTA+AGG | + | chr8.4:18242479-18242498 | None:intergenic | 45.0% |
| !! | TTTGGCTTGAATGCACTCCA+TGG | - | chr8.4:18241249-18241268 | MS.gene063475:CDS | 45.0% |
| !!! | AAGAGGGCATTTTCTTGGGT+TGG | - | chr8.4:18243016-18243035 | MS.gene063475:intron | 45.0% |
| !!! | ACTTATTTTTAAAAATTATT+AGG | + | chr8.4:18242329-18242348 | None:intergenic | 5.0% |
| !!! | ATTAATGTTATTTAATTTAA+AGG | - | chr8.4:18241047-18241066 | MS.gene063475:intron | 5.0% |
| !!! | TAATAATTTTTAAAAATAAG+TGG | - | chr8.4:18242328-18242347 | MS.gene063475:intron | 5.0% |
| !!! | TTAATGTTATTTAATTTAAA+GGG | - | chr8.4:18241048-18241067 | MS.gene063475:intron | 5.0% |
| AGAACAGATGAAGAGCCCCA+GGG | + | chr8.4:18240057-18240076 | None:intergenic | 50.0% | |
| AGATCCTGCGCACTTAAGCA+AGG | - | chr8.4:18241830-18241849 | MS.gene063475:CDS | 50.0% | |
| CCAGGAAGAGAAACAAGGCA+AGG | + | chr8.4:18239888-18239907 | None:intergenic | 50.0% | |
| CCATCACTTATAGCACCAGG+AGG | - | chr8.4:18241585-18241604 | MS.gene063475:CDS | 50.0% | |
| CTCCCAATCCTGACTACTAC+AGG | - | chr8.4:18242209-18242228 | MS.gene063475:intron | 50.0% | |
| CTTCTTGAGGTTTCAGGCAC+AGG | - | chr8.4:18241636-18241655 | MS.gene063475:CDS | 50.0% | |
| GGAAGAGAAACAAGGCAAGG+TGG | + | chr8.4:18239885-18239904 | None:intergenic | 50.0% | |
| GTCAGGATTGGGAGTGAAAG+TGG | + | chr8.4:18242203-18242222 | None:intergenic | 50.0% | |
| TCTACCTTGCTTAAGTGCGC+AGG | + | chr8.4:18241837-18241856 | None:intergenic | 50.0% | |
| TGATAGCTCTCAGGCCTTTG+AGG | - | chr8.4:18240396-18240415 | MS.gene063475:intron | 50.0% | |
| TGCAGGCAGACCTTAATTGG+AGG | - | chr8.4:18242154-18242173 | MS.gene063475:intron | 50.0% | |
| ! | AAGCTGGAGCATCAAGGTTG+GGG | + | chr8.4:18243243-18243262 | None:intergenic | 50.0% |
| ! | ACAAGCTGGAGCATCAAGGT+TGG | + | chr8.4:18243245-18243264 | None:intergenic | 50.0% |
| ! | CAAGCTGGAGCATCAAGGTT+GGG | + | chr8.4:18243244-18243263 | None:intergenic | 50.0% |
| ! | GCTTTGGTGGCATTACCCTT+AGG | - | chr8.4:18242460-18242479 | MS.gene063475:intron | 50.0% |
| ! | GTGTTGATGCTGCACAGTAC+GGG | - | chr8.4:18241502-18241521 | MS.gene063475:CDS | 50.0% |
| ! | TGCAGGGCCATGATGACTTT+TGG | - | chr8.4:18241231-18241250 | MS.gene063475:CDS | 50.0% |
| !! | CCTCCTGGTGCTATAAGTGA+TGG | + | chr8.4:18241588-18241607 | None:intergenic | 50.0% |
| !! | CCTTGCCTTGTTTCTCTTCC+TGG | - | chr8.4:18239885-18239904 | MS.gene063475:CDS | 50.0% |
| ACACTGTTTGGGGAGGAGAC+TGG | - | chr8.4:18241289-18241308 | MS.gene063475:CDS | 55.0% | |
| CACTGTTTGGGGAGGAGACT+GGG | - | chr8.4:18241290-18241309 | MS.gene063475:CDS | 55.0% | |
| GAACAGATGAAGAGCCCCAG+GGG | + | chr8.4:18240056-18240075 | None:intergenic | 55.0% | |
| GAGAACAGATGAAGAGCCCC+AGG | + | chr8.4:18240058-18240077 | None:intergenic | 55.0% | |
| GCTTGAATGCACTCCATGGG+AGG | - | chr8.4:18241253-18241272 | MS.gene063475:CDS | 55.0% | |
| GGTCTGCCTGCAATAGACCT+TGG | + | chr8.4:18242146-18242165 | None:intergenic | 55.0% | |
| TGTTAGGGGGCCTAAAGCGA+GGG | - | chr8.4:18242438-18242457 | MS.gene063475:intron | 55.0% | |
| TTGTTAGGGGGCCTAAAGCG+AGG | - | chr8.4:18242437-18242456 | MS.gene063475:intron | 55.0% | |
| ! | GACCGAGTGCTGTATGAGGT+AGG | - | chr8.4:18240443-18240462 | MS.gene063475:intron | 55.0% |
| ! | GCAAGACCGAGTGCTGTATG+AGG | - | chr8.4:18240439-18240458 | MS.gene063475:intron | 55.0% |
| ATGGTCCTTGGTCGGCTGCT+TGG | - | chr8.4:18241895-18241914 | MS.gene063475:CDS | 60.0% | |
| GCCACCAAAGCCCTCGCTTT+AGG | + | chr8.4:18242451-18242470 | None:intergenic | 60.0% | |
| TGGTCCTTGGTCGGCTGCTT+GGG | - | chr8.4:18241896-18241915 | MS.gene063475:CDS | 60.0% | |
| ! | GCCTAAAGCGAGGGCTTTGG+TGG | - | chr8.4:18242447-18242466 | MS.gene063475:intron | 60.0% |
| !! | CTTGGGTTGGAGAAGCTGGC+GGG | - | chr8.4:18241913-18241932 | MS.gene063475:intron | 60.0% |
| !! | GCTGCTTGGGTTGGAGAAGC+TGG | - | chr8.4:18241909-18241928 | MS.gene063475:intron | 60.0% |
| !! | GCTTGGGTTGGAGAAGCTGG+CGG | - | chr8.4:18241912-18241931 | MS.gene063475:intron | 60.0% |
| !! | TTGGGTTGGAGAAGCTGGCG+GGG | - | chr8.4:18241914-18241933 | MS.gene063475:intron | 60.0% |
| CCAACCCAAGCAGCCGACCA+AGG | + | chr8.4:18241903-18241922 | None:intergenic | 65.0% | |
| CCTTGGTCGGCTGCTTGGGT+TGG | - | chr8.4:18241900-18241919 | MS.gene063475:CDS | 65.0% | |
| GGGGCCTAAAGCGAGGGCTT+TGG | - | chr8.4:18242444-18242463 | MS.gene063475:intron | 65.0% | |
| ! | GCTGGCGGGGCATTCAACAG+TGG | - | chr8.4:18241927-18241946 | MS.gene063475:intron | 65.0% |
| ! | GGCGGGGCATTCAACAGTGG+TGG | - | chr8.4:18241930-18241949 | MS.gene063475:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18239874 | 18243285 | 18239874 | ID=MS.gene063475 |
| chr8.4 | mRNA | 18239874 | 18243285 | 18239874 | ID=MS.gene063475.t1;Parent=MS.gene063475 |
| chr8.4 | exon | 18243076 | 18243285 | 18243076 | ID=MS.gene063475.t1.exon1;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18243076 | 18243285 | 18243076 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18242906 | 18242942 | 18242906 | ID=MS.gene063475.t1.exon2;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18242906 | 18242942 | 18242906 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18242574 | 18242757 | 18242574 | ID=MS.gene063475.t1.exon3;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18242574 | 18242757 | 18242574 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18241775 | 18241923 | 18241775 | ID=MS.gene063475.t1.exon4;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18241775 | 18241923 | 18241775 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18241457 | 18241690 | 18241457 | ID=MS.gene063475.t1.exon5;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18241457 | 18241690 | 18241457 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18241171 | 18241360 | 18241171 | ID=MS.gene063475.t1.exon6;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18241171 | 18241360 | 18241171 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18240929 | 18241054 | 18240929 | ID=MS.gene063475.t1.exon7;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18240929 | 18241054 | 18240929 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18240503 | 18240605 | 18240503 | ID=MS.gene063475.t1.exon8;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18240503 | 18240605 | 18240503 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| chr8.4 | exon | 18239874 | 18240287 | 18239874 | ID=MS.gene063475.t1.exon9;Parent=MS.gene063475.t1 |
| chr8.4 | CDS | 18239874 | 18240287 | 18239874 | ID=cds.MS.gene063475.t1;Parent=MS.gene063475.t1 |
| Gene Sequence |
| Protein sequence |
