Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51808.t1 | XP_013459051.1 | 88.8 | 519 | 54 | 2 | 1 | 515 | 1 | 519 | 2.60E-274 | 954.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51808.t1 | Q9FF10 | 58.1 | 530 | 195 | 3 | 10 | 513 | 15 | 543 | 4.8e-184 | 645.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51808.t1 | A0A072UTC9 | 88.8 | 519 | 54 | 2 | 1 | 515 | 1 | 519 | 1.9e-274 | 954.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene51808 | 0.806373 | 8.49E-50 | -1.69E-46 |
| MS.gene049173 | MS.gene51808 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene51808 | 0.861168 | 1.24E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene51808 | 0.856186 | 3.81E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene51808 | 0.82551 | 4.51E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene51808 | 0.848551 | 5.70E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene51808 | 0.848768 | 4.97E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene51808 | 0.854855 | 9.32E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene51808 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene51808 | -0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene51808 | 0.807428 | 5.08E-50 | -1.69E-46 |
| MS.gene049828 | MS.gene51808 | 0.830458 | 2.90E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene51808 | 0.836233 | 1.06E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene51808 | 0.832329 | 1.01E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene51808 | 0.833189 | 6.15E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene51808 | 0.833756 | 4.44E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene51808 | 0.823216 | 1.56E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene51808 | 0.826234 | 3.03E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene51808 | 0.851772 | 7.14E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene51808 | 0.841262 | 5.29E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene51808 | 0.820254 | 7.56E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene51808 | 0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene51808 | 0.831485 | 1.63E-55 | -1.69E-46 |
| MS.gene050662 | MS.gene51808 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene51808 | 0.824542 | 7.63E-54 | -1.69E-46 |
| MS.gene050686 | MS.gene51808 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene51808 | 0.844655 | 6.61E-59 | -1.69E-46 |
| MS.gene05079 | MS.gene51808 | -0.818926 | 1.52E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene51808 | 0.855277 | 7.03E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene51808 | 0.856115 | 4.00E-62 | -1.69E-46 |
| MS.gene050986 | MS.gene51808 | 0.804281 | 2.33E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene51808 | 0.849251 | 3.65E-60 | -1.69E-46 |
| MS.gene051551 | MS.gene51808 | 0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene51808 | 0.844853 | 5.84E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene51808 | 0.837062 | 6.49E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene51808 | 0.818438 | 1.96E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene51808 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene51808 | 0.820895 | 5.39E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene51808 | 0.852653 | 4.01E-61 | -1.69E-46 |
| MS.gene051874 | MS.gene51808 | 0.830783 | 2.42E-55 | -1.69E-46 |
| MS.gene051949 | MS.gene51808 | 0.846217 | 2.49E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene51808 | 0.813257 | 2.80E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene51808 | 0.811287 | 7.55E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene51808 | 0.835698 | 1.44E-56 | -1.69E-46 |
| MS.gene052805 | MS.gene51808 | -0.802961 | 4.38E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene51808 | 0.808514 | 2.98E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene51808 | 0.825515 | 4.49E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene51808 | 0.828862 | 7.10E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene51808 | 0.821459 | 3.99E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene51808 | 0.840547 | 8.14E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene51808 | 0.809614 | 1.73E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene51808 | 0.83069 | 2.55E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene51808 | 0.82954 | 4.86E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene51808 | 0.802427 | 5.64E-49 | -1.69E-46 |
| MS.gene053384 | MS.gene51808 | 0.800871 | 1.18E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene51808 | -0.819466 | 1.14E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene51808 | 0.847623 | 1.03E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene51808 | 0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene51808 | 0.814762 | 1.31E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene51808 | 0.827316 | 1.67E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene51808 | 0.803655 | 3.14E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene51808 | 0.854953 | 8.73E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene51808 | 0.878299 | 3.14E-69 | -1.69E-46 |
| MS.gene054003 | MS.gene51808 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene51808 | 0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene51808 | 0.834733 | 2.53E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene51808 | 0.853996 | 1.65E-61 | -1.69E-46 |
| MS.gene054706 | MS.gene51808 | -0.817338 | 3.47E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene51808 | 0.834222 | 3.39E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene51808 | 0.841057 | 5.99E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene51808 | 0.82079 | 5.69E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene51808 | 0.830404 | 2.99E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene51808 | 0.829342 | 5.43E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene51808 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene51808 | 0.841022 | 6.11E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene51808 | 0.837011 | 6.68E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene51808 | 0.875843 | 2.24E-68 | -1.69E-46 |
| MS.gene055636 | MS.gene51808 | 0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene055638 | MS.gene51808 | 0.819723 | 1.00E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene51808 | 0.844542 | 7.09E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene51808 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene51808 | 0.823931 | 1.06E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene51808 | 0.814148 | 1.79E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene51808 | 0.865594 | 5.27E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene51808 | 0.86284 | 3.81E-64 | -1.69E-46 |
| MS.gene056374 | MS.gene51808 | 0.83635 | 9.85E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene51808 | 0.818944 | 1.50E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene51808 | 0.818857 | 1.57E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene51808 | 0.8464 | 2.22E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene51808 | 0.843062 | 1.77E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene51808 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene51808 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene056611 | MS.gene51808 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene51808 | 0.801424 | 9.07E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene51808 | 0.862152 | 6.20E-64 | -1.69E-46 |
| MS.gene05666 | MS.gene51808 | 0.819479 | 1.14E-52 | -1.69E-46 |
| MS.gene056857 | MS.gene51808 | -0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene51808 | 0.800562 | 1.36E-48 | -1.69E-46 |
| MS.gene056947 | MS.gene51808 | 0.839414 | 1.61E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene51808 | 0.809557 | 1.78E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene51808 | 0.825695 | 4.07E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene51808 | 0.829946 | 3.87E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene51808 | 0.812131 | 4.95E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene51808 | 0.815464 | 9.12E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene51808 | 0.822808 | 1.94E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene51808 | 0.834584 | 2.75E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene51808 | 0.855438 | 6.31E-62 | -1.69E-46 |
| MS.gene057926 | MS.gene51808 | 0.977696 | 2.68E-144 | -1.69E-46 |
| MS.gene057927 | MS.gene51808 | 0.820898 | 5.38E-53 | -1.69E-46 |
| MS.gene058006 | MS.gene51808 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene51808 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene51808 | 0.823196 | 1.58E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene51808 | 0.838959 | 2.11E-57 | -1.69E-46 |
| MS.gene058459 | MS.gene51808 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene51808 | 0.834662 | 2.63E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene51808 | 0.845152 | 4.85E-59 | -1.69E-46 |
| MS.gene058790 | MS.gene51808 | 0.808208 | 3.47E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene51808 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene51808 | 0.827475 | 1.53E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene51808 | 0.809331 | 1.99E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene51808 | 0.801931 | 7.13E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene51808 | 0.882753 | 8.00E-71 | -1.69E-46 |
| MS.gene059305 | MS.gene51808 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene51808 | 0.844708 | 6.40E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene51808 | 0.832257 | 1.05E-55 | -1.69E-46 |
| MS.gene059674 | MS.gene51808 | 0.808692 | 2.73E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene51808 | 0.840785 | 7.06E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene51808 | 0.836001 | 1.21E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene51808 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene51808 | 0.838879 | 2.21E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene51808 | 0.842037 | 3.30E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene51808 | 0.861052 | 1.35E-63 | -1.69E-46 |
| MS.gene060482 | MS.gene51808 | 0.842223 | 2.95E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene51808 | 0.843195 | 1.63E-58 | -1.69E-46 |
| MS.gene060761 | MS.gene51808 | 0.824968 | 6.05E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene51808 | 0.856302 | 3.53E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene51808 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene51808 | 0.861748 | 8.25E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene51808 | 0.826927 | 2.07E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene51808 | 0.817572 | 3.08E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene51808 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene51808 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene51808 | 0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene51808 | 0.858208 | 9.64E-63 | -1.69E-46 |
| MS.gene061134 | MS.gene51808 | 0.829796 | 4.21E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene51808 | 0.829143 | 6.07E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51808 | MS.gene044430 | PPI |
| MS.gene057928 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene95196 | PPI |
| MS.gene033803 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene50879 | PPI |
| MS.gene51808 | MS.gene063475 | PPI |
| MS.gene51808 | MS.gene033803 | PPI |
| MS.gene69310 | MS.gene51808 | PPI |
| MS.gene033078 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene69866 | PPI |
| MS.gene044430 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene041370 | PPI |
| MS.gene036682 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene036317 | PPI |
| MS.gene57996 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene057926 | PPI |
| MS.gene51808 | MS.gene95198 | PPI |
| MS.gene78493 | MS.gene51808 | PPI |
| MS.gene51808 | MS.gene69310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51808.t1 | MTR_3g023710 | 88.825 | 519 | 54 | 2 | 1 | 515 | 1 | 519 | 0.0 | 951 |
| MS.gene51808.t1 | MTR_3g023700 | 83.366 | 517 | 84 | 1 | 1 | 515 | 1 | 517 | 0.0 | 903 |
| MS.gene51808.t1 | MTR_3g023690 | 84.139 | 517 | 79 | 2 | 1 | 515 | 1 | 516 | 0.0 | 899 |
| MS.gene51808.t1 | MTR_4g109300 | 67.939 | 524 | 138 | 2 | 19 | 512 | 19 | 542 | 0.0 | 739 |
| MS.gene51808.t1 | MTR_4g109300 | 63.799 | 558 | 138 | 3 | 19 | 512 | 19 | 576 | 0.0 | 722 |
| MS.gene51808.t1 | MTR_4g109300 | 67.535 | 499 | 132 | 2 | 19 | 487 | 19 | 517 | 0.0 | 698 |
| MS.gene51808.t1 | MTR_3g023690 | 81.501 | 373 | 67 | 1 | 145 | 515 | 56 | 428 | 0.0 | 633 |
| MS.gene51808.t1 | MTR_4g109300 | 66.499 | 397 | 103 | 2 | 146 | 512 | 1 | 397 | 0.0 | 541 |
| MS.gene51808.t1 | MTR_5g043710 | 49.903 | 515 | 245 | 5 | 1 | 513 | 1 | 504 | 0.0 | 520 |
| MS.gene51808.t1 | MTR_2g451510 | 47.448 | 529 | 256 | 6 | 4 | 513 | 12 | 537 | 3.63e-167 | 484 |
| MS.gene51808.t1 | MTR_4g116070 | 49.697 | 495 | 239 | 6 | 25 | 513 | 39 | 529 | 2.30e-161 | 469 |
| MS.gene51808.t1 | MTR_4g116040 | 40.974 | 349 | 184 | 5 | 167 | 513 | 15 | 343 | 4.81e-81 | 256 |
| MS.gene51808.t1 | MTR_4g109260 | 58.974 | 78 | 32 | 0 | 227 | 304 | 59 | 136 | 1.43e-27 | 107 |
| MS.gene51808.t1 | MTR_8g091920 | 30.473 | 338 | 138 | 10 | 172 | 488 | 2 | 263 | 5.08e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51808.t1 | AT5G61250 | 57.463 | 536 | 200 | 3 | 3 | 513 | 7 | 539 | 0.0 | 645 |
| MS.gene51808.t1 | AT5G61250 | 57.463 | 536 | 200 | 3 | 3 | 513 | 7 | 539 | 0.0 | 645 |
| MS.gene51808.t1 | AT5G61250 | 57.463 | 536 | 200 | 3 | 3 | 513 | 7 | 539 | 0.0 | 645 |
| MS.gene51808.t1 | AT5G07830 | 57.542 | 537 | 199 | 4 | 3 | 513 | 10 | 543 | 0.0 | 644 |
| MS.gene51808.t1 | AT5G34940 | 47.850 | 535 | 254 | 6 | 2 | 513 | 4 | 536 | 3.98e-172 | 496 |
| MS.gene51808.t1 | AT5G34940 | 50.660 | 379 | 182 | 3 | 2 | 376 | 4 | 381 | 3.32e-129 | 381 |
| MS.gene51808.t1 | AT5G34940 | 48.387 | 403 | 187 | 4 | 130 | 513 | 1 | 401 | 3.92e-128 | 379 |
| MS.gene51808.t1 | AT5G34940 | 46.000 | 300 | 141 | 4 | 233 | 513 | 2 | 299 | 1.76e-86 | 269 |
Find 128 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATACTCTTCCCTGAATT+TGG | 0.168980 | 3.4:-16085330 | None:intergenic |
| ACACATCTAGAATTCGTTTA+AGG | 0.175950 | 3.4:-16083158 | None:intergenic |
| TTCAGGGCCATTGTGATATT+TGG | 0.181342 | 3.4:+16082589 | MS.gene51808:intron |
| CTTCTGAGGTTATTATCTTT+TGG | 0.182037 | 3.4:-16085359 | None:intergenic |
| CCTTGCATTGTTTCTCCTTT+TGG | 0.187389 | 3.4:+16081408 | MS.gene51808:CDS |
| AAGATTGATGCATGGGAATT+TGG | 0.194764 | 3.4:+16082721 | MS.gene51808:CDS |
| ACACTCATCGATTGTAAATT+TGG | 0.210549 | 3.4:+16081585 | MS.gene51808:CDS |
| ACGAAGCTTCTTCAGATTTC+TGG | 0.223255 | 3.4:+16083249 | MS.gene51808:CDS |
| CATTTGCTTTAACAGTTATA+TGG | 0.259495 | 3.4:-16085301 | None:intergenic |
| CAAATGAGGTGGCCAAATTC+AGG | 0.267956 | 3.4:+16085318 | MS.gene51808:CDS |
| ACACATTTGTGAATAGCTTT+TGG | 0.310585 | 3.4:+16083614 | MS.gene51808:CDS |
| CATGGTTTGCTACTAGTAAA+TGG | 0.313611 | 3.4:+16081466 | MS.gene51808:CDS |
| ACAATAAACTTTAGTATTGT+AGG | 0.313930 | 3.4:-16083779 | None:intergenic |
| GCAACGACGGCTATTGTTCT+TGG | 0.319707 | 3.4:+16081560 | MS.gene51808:CDS |
| CAAGCTGGAGCATCAAAGTT+TGG | 0.331768 | 3.4:-16085515 | None:intergenic |
| GACAAAGGATCTATGTATAT+TGG | 0.346473 | 3.4:-16085473 | None:intergenic |
| ACCAGACTGGTAATAATGTT+TGG | 0.347446 | 3.4:+16082635 | MS.gene51808:CDS |
| TCGTAGGTACTTAGATCAAC+TGG | 0.348539 | 3.4:+16083744 | MS.gene51808:intron |
| ACAATACTAAAGTTTATTGT+AGG | 0.351194 | 3.4:+16083782 | MS.gene51808:CDS |
| CTTCTTCAGATTTCTGGTTC+AGG | 0.352354 | 3.4:+16083255 | MS.gene51808:CDS |
| CAACGACGGCTATTGTTCTT+GGG | 0.372556 | 3.4:+16081561 | MS.gene51808:CDS |
| ATAAAATCATAAGCATTTGT+AGG | 0.374953 | 3.4:-16082673 | None:intergenic |
| TATTGTAGGCAGACATTTAA+CGG | 0.389954 | 3.4:+16083796 | MS.gene51808:CDS |
| TGATAGCCCTCAAACCTTTG+AGG | 0.392187 | 3.4:+16082084 | MS.gene51808:intron |
| ACATTTAACGGAGGGAACTA+TGG | 0.394051 | 3.4:+16083808 | MS.gene51808:CDS |
| ATACAGACCTTGGATTGCTT+TGG | 0.405849 | 3.4:-16081755 | None:intergenic |
| TCATTTGCGCTACGATTGAT+TGG | 0.419062 | 3.4:+16081521 | MS.gene51808:CDS |
| TCCACTTTGATCATGCGATT+AGG | 0.423414 | 3.4:-16083481 | None:intergenic |
| CTGATGGGAAAGAAGGTTCT+TGG | 0.434566 | 3.4:+16084024 | MS.gene51808:CDS |
| GTCTTATCCTCAAAGGTTTG+AGG | 0.436766 | 3.4:-16082091 | None:intergenic |
| TATAAAGTACACTGTTTCAA+AGG | 0.437179 | 3.4:+16082693 | MS.gene51808:CDS |
| CCAGACTGGTAATAATGTTT+GGG | 0.439496 | 3.4:+16082636 | MS.gene51808:CDS |
| CATGGGTAGGAGAAGCTGGC+GGG | 0.443117 | 3.4:+16083560 | MS.gene51808:CDS |
| CCCAAACATTATTACCAGTC+TGG | 0.446574 | 3.4:-16082636 | None:intergenic |
| ATAATGTTTGGGAAGGAGCC+TGG | 0.451503 | 3.4:+16082647 | MS.gene51808:CDS |
| TATACGTGCCTGTAGTAGTC+AGG | 0.455296 | 3.4:-16083862 | None:intergenic |
| GTCAGGATTAGGAGTGAGAG+TGG | 0.456206 | 3.4:-16083845 | None:intergenic |
| AAGCTGGAGCATCAAAGTTT+GGG | 0.458633 | 3.4:-16085514 | None:intergenic |
| TTGATGCTCCAGCTTGTGCC+AGG | 0.461606 | 3.4:+16085522 | MS.gene51808:CDS |
| TACCAGTCTGGTGCTTCCCA+TGG | 0.463290 | 3.4:-16082624 | None:intergenic |
| ACTATTGTGGCATCGGCTGA+TGG | 0.464644 | 3.4:+16084008 | MS.gene51808:CDS |
| ACGCCCATTGTTCAAAAGAC+AGG | 0.464807 | 3.4:+16084085 | MS.gene51808:CDS |
| TCTTATCCTCAAAGGTTTGA+GGG | 0.467877 | 3.4:-16082090 | None:intergenic |
| AACTCATCATATATACAACT+TGG | 0.470118 | 3.4:+16083293 | MS.gene51808:CDS |
| TAAAATCATAAGCATTTGTA+GGG | 0.476533 | 3.4:-16082672 | None:intergenic |
| GTAGGAAAATTGAAGTCTAC+TGG | 0.478508 | 3.4:+16082149 | MS.gene51808:CDS |
| TAACTTGAAGAGAGGCCAAA+AGG | 0.479441 | 3.4:-16081423 | None:intergenic |
| TCTGCATGGGTAGGAGAAGC+TGG | 0.485954 | 3.4:+16083556 | MS.gene51808:CDS |
| ATAAAGTACACTGTTTCAAA+GGG | 0.487781 | 3.4:+16082694 | MS.gene51808:CDS |
| CATATATACAACTTGGGCCC+AGG | 0.490634 | 3.4:+16083300 | MS.gene51808:CDS |
| AAATGAGGTGGCCAAATTCA+GGG | 0.495682 | 3.4:+16085319 | MS.gene51808:CDS |
| TGCCTGTAGTAGTCAGGATT+AGG | 0.496914 | 3.4:-16083856 | None:intergenic |
| TTTCAGTGCCTGGCACAAGC+TGG | 0.498521 | 3.4:-16085530 | None:intergenic |
| GCAGCTAACAGTGGTGGTAT+TGG | 0.502287 | 3.4:+16083583 | MS.gene51808:CDS |
| CTCCTAATCCTGACTACTAC+AGG | 0.506485 | 3.4:+16083854 | MS.gene51808:CDS |
| CGGTCCTTGGGCTTCTGCAT+GGG | 0.507100 | 3.4:+16083543 | MS.gene51808:CDS |
| TTGTGCACTGGATCCGTTGT+TGG | 0.509071 | 3.4:-16085437 | None:intergenic |
| CTATTGTGGCATCGGCTGAT+GGG | 0.511834 | 3.4:+16084009 | MS.gene51808:CDS |
| TTTATCACGTCTTTCGCATA+CGG | 0.511957 | 3.4:-16083135 | None:intergenic |
| GACCTTGGATTGCTTTGGCA+AGG | 0.512470 | 3.4:-16081750 | None:intergenic |
| TGCCATTCAGCAACATGGTA+TGG | 0.512493 | 3.4:-16085382 | None:intergenic |
| ACGGTCCTTGGGCTTCTGCA+TGG | 0.512670 | 3.4:+16083542 | MS.gene51808:CDS |
| TTTGGCTTGAATGCGCTCCA+TGG | 0.517585 | 3.4:+16082607 | MS.gene51808:CDS |
| TTCCTTATCATAAAATCCAC+CGG | 0.519683 | 3.4:-16083220 | None:intergenic |
| GGGATACAAGATTGATGCAT+GGG | 0.521559 | 3.4:+16082714 | MS.gene51808:CDS |
| TCCACCGGGTGCTGCAAGTG+AGG | 0.528598 | 3.4:-16083205 | None:intergenic |
| TTGGCTTGAATGCGCTCCAT+GGG | 0.529687 | 3.4:+16082608 | MS.gene51808:CDS |
| CTCCATGGGAAGCACCAGAC+TGG | 0.530372 | 3.4:+16082622 | MS.gene51808:CDS |
| CCTTTGAGGATAAGACTTGG+AGG | 0.532262 | 3.4:+16082098 | MS.gene51808:CDS |
| CTGAAAACAGCGCACTATTG+TGG | 0.533673 | 3.4:+16083995 | MS.gene51808:intron |
| TATAACTGTTAAAGCAAATG+AGG | 0.534693 | 3.4:+16085304 | MS.gene51808:CDS |
| TAATGTTTGGGAAGGAGCCT+GGG | 0.535436 | 3.4:+16082648 | MS.gene51808:CDS |
| ATAAGCATTTGTAGGGTCCC+AGG | 0.537484 | 3.4:-16082665 | None:intergenic |
| CGCCCATTGTTCAAAAGACA+GGG | 0.537703 | 3.4:+16084086 | MS.gene51808:CDS |
| TGGATTGCTTTGGCAAGGAT+AGG | 0.539512 | 3.4:-16081745 | None:intergenic |
| AGCCATACCATGTTGCTGAA+TGG | 0.540591 | 3.4:+16085380 | MS.gene51808:CDS |
| TGGAGGTTCTCTGCAAGACC+AGG | 0.545315 | 3.4:+16082115 | MS.gene51808:CDS |
| CCTCCAAGTCTTATCCTCAA+AGG | 0.546272 | 3.4:-16082098 | None:intergenic |
| GGTAATGAGTTAAGCGGTGA+AGG | 0.547883 | 3.4:+16083087 | MS.gene51808:intron |
| TTTGCGCTACGATTGATTGG+TGG | 0.550188 | 3.4:+16081524 | MS.gene51808:CDS |
| GCATCGGCTGATGGGAAAGA+AGG | 0.553242 | 3.4:+16084017 | MS.gene51808:CDS |
| GATCTCACATTATTGTGCAC+TGG | 0.553447 | 3.4:-16085449 | None:intergenic |
| ACAGCGCACTATTGTGGCAT+CGG | 0.553847 | 3.4:+16084001 | MS.gene51808:intron |
| GCATGGGTAGGAGAAGCTGG+CGG | 0.561478 | 3.4:+16083559 | MS.gene51808:CDS |
| TTCCTACGTTATACACCACC+TGG | 0.561570 | 3.4:-16082133 | None:intergenic |
| GAAGGCGTTGGTGCATCAGT+CGG | 0.563564 | 3.4:+16083105 | MS.gene51808:CDS |
| GAGTTAAGCGGTGAAGGCGT+TGG | 0.566975 | 3.4:+16083093 | MS.gene51808:CDS |
| ATCTTTACACATGCAAAGGT+GGG | 0.567167 | 3.4:+16082220 | MS.gene51808:CDS |
| GCAACATGGTATGGCTTCTG+AGG | 0.570919 | 3.4:-16085373 | None:intergenic |
| TGAGAGTGGAGGAATTGAGA+AGG | 0.571730 | 3.4:-16083831 | None:intergenic |
| CCACCGGGTGCTGCAAGTGA+GGG | 0.575829 | 3.4:-16083204 | None:intergenic |
| ACCTAATCGCATGATCAAAG+TGG | 0.578144 | 3.4:+16083480 | MS.gene51808:CDS |
| CTAAGTAAAGATATTGAACA+TGG | 0.579049 | 3.4:+16081448 | MS.gene51808:CDS |
| CCTTGGGCTTCTGCATGGGT+AGG | 0.579890 | 3.4:+16083547 | MS.gene51808:CDS |
| GATCTTTACACATGCAAAGG+TGG | 0.583363 | 3.4:+16082219 | MS.gene51808:CDS |
| AAACCCTCACTTGCAGCACC+CGG | 0.589021 | 3.4:+16083201 | MS.gene51808:CDS |
| AACGACGGCTATTGTTCTTG+GGG | 0.589877 | 3.4:+16081562 | MS.gene51808:CDS |
| CGTAGGTACTTAGATCAACT+GGG | 0.593139 | 3.4:+16083745 | MS.gene51808:intron |
| AGGATTAGGAGTGAGAGTGG+AGG | 0.593659 | 3.4:-16083842 | None:intergenic |
| ATGGGTAGGAGAAGCTGGCG+GGG | 0.596035 | 3.4:+16083561 | MS.gene51808:CDS |
| CCGTCGTTGCATTTATCATG+AGG | 0.596287 | 3.4:-16081547 | None:intergenic |
| AAACCTTTGAGGATAAGACT+TGG | 0.596572 | 3.4:+16082095 | MS.gene51808:CDS |
| ATCCTTGCCAAAGCAATCCA+AGG | 0.599295 | 3.4:+16081748 | MS.gene51808:CDS |
| AGGGATACAAGATTGATGCA+TGG | 0.601095 | 3.4:+16082713 | MS.gene51808:CDS |
| GGCGGGGCAGCTAACAGTGG+TGG | 0.601222 | 3.4:+16083577 | MS.gene51808:CDS |
| ACTCATCATATATACAACTT+GGG | 0.603814 | 3.4:+16083294 | MS.gene51808:CDS |
| AGGGATCTTTACACATGCAA+AGG | 0.605651 | 3.4:+16082216 | MS.gene51808:CDS |
| TGGAATGCCATTCAGCAACA+TGG | 0.608898 | 3.4:-16085387 | None:intergenic |
| ACAATAAATGCAATGGACAA+AGG | 0.611764 | 3.4:-16085488 | None:intergenic |
| TGGGTACACAATAAATGCAA+TGG | 0.613033 | 3.4:-16085495 | None:intergenic |
| ACTTAGAGTAACTTGAAGAG+AGG | 0.614320 | 3.4:-16081431 | None:intergenic |
| AACTGTTAAAGCAAATGAGG+TGG | 0.616456 | 3.4:+16085307 | MS.gene51808:CDS |
| GTAGGCAGACATTTAACGGA+GGG | 0.622201 | 3.4:+16083800 | MS.gene51808:CDS |
| ATAAACTTTAGTATTGTAGG+TGG | 0.622737 | 3.4:-16083776 | None:intergenic |
| ACTGGTAATAATGTTTGGGA+AGG | 0.628365 | 3.4:+16082640 | MS.gene51808:CDS |
| CCCTCACTTGCAGCACCCGG+TGG | 0.628745 | 3.4:+16083204 | MS.gene51808:CDS |
| CCTACCCATGCAGAAGCCCA+AGG | 0.632180 | 3.4:-16083547 | None:intergenic |
| AGGTTCTCTGCAAGACCAGG+TGG | 0.641188 | 3.4:+16082118 | MS.gene51808:CDS |
| AAAAGGGGATATTCCAACAA+CGG | 0.643386 | 3.4:+16085424 | MS.gene51808:CDS |
| TATGTAGGTAATGAGTTAAG+CGG | 0.653581 | 3.4:+16083081 | MS.gene51808:intron |
| ATGTGTTATACAAGAACTCG+AGG | 0.655501 | 3.4:+16083175 | MS.gene51808:CDS |
| CCTCATGATAAATGCAACGA+CGG | 0.659665 | 3.4:+16081547 | MS.gene51808:CDS |
| TCCTTATCATAAAATCCACC+GGG | 0.660783 | 3.4:-16083219 | None:intergenic |
| GCTGGCGGGGCAGCTAACAG+TGG | 0.661575 | 3.4:+16083574 | MS.gene51808:CDS |
| CCAAAAGGAGAAACAATGCA+AGG | 0.666540 | 3.4:-16081408 | None:intergenic |
| ATTCAAGCCAAATATCACAA+TGG | 0.676549 | 3.4:-16082596 | None:intergenic |
| TGTAGGCAGACATTTAACGG+AGG | 0.691213 | 3.4:+16083799 | MS.gene51808:CDS |
| GACCAGGTGGTGTATAACGT+AGG | 0.736735 | 3.4:+16082131 | MS.gene51808:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTATATTATATAATAG+AGG | + | chr3.4:16084143-16084162 | MS.gene51808:intron | 10.0% |
| !!! | ATATATTTATTTTTTTTCAC+TGG | + | chr3.4:16083359-16083378 | MS.gene51808:intron | 10.0% |
| !! | GATGATAATAACAAATATAA+TGG | - | chr3.4:16082289-16082308 | None:intergenic | 15.0% |
| !!! | ATAATAACAAATATAATGGA+AGG | - | chr3.4:16082285-16082304 | None:intergenic | 15.0% |
| !!! | TGATTGGTTTAATAATTTTT+TGG | + | chr3.4:16081873-16081892 | MS.gene51808:intron | 15.0% |
| !!! | TTCTTTTAAACCAAATAAAA+AGG | + | chr3.4:16082329-16082348 | MS.gene51808:intron | 15.0% |
| !! | ACAATAAACTTTAGTATTGT+AGG | - | chr3.4:16083782-16083801 | None:intergenic | 20.0% |
| !! | ACAATACTAAAGTTTATTGT+AGG | + | chr3.4:16083782-16083801 | MS.gene51808:CDS | 20.0% |
| !! | ACCTAAAGTCTTTAATTATA+AGG | - | chr3.4:16082379-16082398 | None:intergenic | 20.0% |
| !! | ACTAAACAGTTATATTTAGT+TGG | - | chr3.4:16084637-16084656 | None:intergenic | 20.0% |
| !! | ACTTAGAAATAGATTATGAA+TGG | - | chr3.4:16083409-16083428 | None:intergenic | 20.0% |
| !! | ATAAAATCATAAGCATTTGT+AGG | - | chr3.4:16082676-16082695 | None:intergenic | 20.0% |
| !! | ATCTTAATTAGTGTAACTAT+GGG | + | chr3.4:16084313-16084332 | MS.gene51808:intron | 20.0% |
| !! | CTTATTGTATATACTTATGT+AGG | + | chr3.4:16083066-16083085 | MS.gene51808:intron | 20.0% |
| !! | TAAAATCATAAGCATTTGTA+GGG | - | chr3.4:16082675-16082694 | None:intergenic | 20.0% |
| !! | TATCTTAATTAGTGTAACTA+TGG | + | chr3.4:16084312-16084331 | MS.gene51808:intron | 20.0% |
| !! | TCCTTATAATTAAAGACTTT+AGG | + | chr3.4:16082375-16082394 | MS.gene51808:intron | 20.0% |
| !! | TCTTTAATTATAAGGAAGAA+AGG | - | chr3.4:16082371-16082390 | None:intergenic | 20.0% |
| !! | TGTTTAGTTAGTTATGTTTA+AGG | + | chr3.4:16084649-16084668 | MS.gene51808:intron | 20.0% |
| !! | TTAATAGATATAACTTGATG+AGG | + | chr3.4:16083917-16083936 | MS.gene51808:intron | 20.0% |
| !!! | AATCATTTTTTCAATAAGAC+AGG | + | chr3.4:16082251-16082270 | MS.gene51808:CDS | 20.0% |
| !!! | ATCATTTTTTCAATAAGACA+GGG | + | chr3.4:16082252-16082271 | MS.gene51808:CDS | 20.0% |
| !!! | ATTGTTGTTTTTTATTACAG+TGG | + | chr3.4:16082007-16082026 | MS.gene51808:intron | 20.0% |
| !!! | GTTTTTATAACATTGTTGAT+GGG | + | chr3.4:16081978-16081997 | MS.gene51808:intron | 20.0% |
| !!! | TAAGTTAATTTCTCTTTTTC+AGG | + | chr3.4:16083424-16083443 | MS.gene51808:intron | 20.0% |
| !!! | TAGTTTGTTATTTTCGTTAA+TGG | + | chr3.4:16082761-16082780 | MS.gene51808:intron | 20.0% |
| !!! | TGTTTTTATAACATTGTTGA+TGG | + | chr3.4:16081977-16081996 | MS.gene51808:intron | 20.0% |
| !!! | TTGAAACTATCCTTTTTATT+TGG | - | chr3.4:16082342-16082361 | None:intergenic | 20.0% |
| ! | AAAAATCAGAATTCTTCTTC+TGG | - | chr3.4:16083687-16083706 | None:intergenic | 25.0% |
| ! | AACTCATCATATATACAACT+TGG | + | chr3.4:16083293-16083312 | MS.gene51808:CDS | 25.0% |
| ! | AATATAATATCCTTCCTAAG+AGG | - | chr3.4:16084134-16084153 | None:intergenic | 25.0% |
| ! | AATTGAACAATGACTAAAAC+AGG | - | chr3.4:16081692-16081711 | None:intergenic | 25.0% |
| ! | ACTCAAGTTAACAAAAAAAG+GGG | + | chr3.4:16085409-16085428 | MS.gene51808:CDS | 25.0% |
| ! | ACTCATCATATATACAACTT+GGG | + | chr3.4:16083294-16083313 | MS.gene51808:CDS | 25.0% |
| ! | ATAAACTTTAGTATTGTAGG+TGG | - | chr3.4:16083779-16083798 | None:intergenic | 25.0% |
| ! | ATAAAGTACACTGTTTCAAA+GGG | + | chr3.4:16082694-16082713 | MS.gene51808:CDS | 25.0% |
| ! | ATGAAATTGGTAAGAAATTC+AGG | - | chr3.4:16085209-16085228 | None:intergenic | 25.0% |
| ! | CAATGTTATAAAAACAAGAC+CGG | - | chr3.4:16081973-16081992 | None:intergenic | 25.0% |
| ! | CACTCAAGTTAACAAAAAAA+GGG | + | chr3.4:16085408-16085427 | MS.gene51808:CDS | 25.0% |
| ! | CATTTGCTTTAACAGTTATA+TGG | - | chr3.4:16085304-16085323 | None:intergenic | 25.0% |
| ! | CCATTTCAAAAGATGAAAAA+TGG | + | chr3.4:16082176-16082195 | MS.gene51808:CDS | 25.0% |
| ! | CTAAGTAAAGATATTGAACA+TGG | + | chr3.4:16081448-16081467 | MS.gene51808:CDS | 25.0% |
| ! | CTTAGAAAGAGGAAAATAAA+AGG | - | chr3.4:16083655-16083674 | None:intergenic | 25.0% |
| ! | GAAATAGATTATGAATGGTA+TGG | - | chr3.4:16083404-16083423 | None:intergenic | 25.0% |
| ! | GCAAATATGGTAATTAACTA+TGG | + | chr3.4:16084258-16084277 | MS.gene51808:intron | 25.0% |
| ! | GGTACATATTTACACAAAAT+GGG | - | chr3.4:16082490-16082509 | None:intergenic | 25.0% |
| ! | GTACATATTTACACAAAATG+GGG | - | chr3.4:16082489-16082508 | None:intergenic | 25.0% |
| ! | TAGCAAAAGTCAAAAGATAT+CGG | - | chr3.4:16085172-16085191 | None:intergenic | 25.0% |
| ! | TAGTTCATATATCCTAACTA+AGG | - | chr3.4:16084866-16084885 | None:intergenic | 25.0% |
| ! | TATAAAGTACACTGTTTCAA+AGG | + | chr3.4:16082693-16082712 | MS.gene51808:CDS | 25.0% |
| ! | TATAACTGTTAAAGCAAATG+AGG | + | chr3.4:16085304-16085323 | MS.gene51808:CDS | 25.0% |
| ! | TATATACAATAAGTCCACAT+CGG | - | chr3.4:16083059-16083078 | None:intergenic | 25.0% |
| ! | TGGTACATATTTACACAAAA+TGG | - | chr3.4:16082491-16082510 | None:intergenic | 25.0% |
| ! | TGTTTGAAAATATTGAATCC+TGG | + | chr3.4:16085091-16085110 | MS.gene51808:intron | 25.0% |
| ! | TTATCAGATAACAGTTATAG+CGG | - | chr3.4:16082909-16082928 | None:intergenic | 25.0% |
| ! | TTCGACTTCTATAAATAGTT+GGG | - | chr3.4:16084574-16084593 | None:intergenic | 25.0% |
| !! | TAGTTATGTTTAAGGTAACT+AGG | + | chr3.4:16084657-16084676 | MS.gene51808:intron | 25.0% |
| !! | TTAACTATGGATTGATTCTT+TGG | + | chr3.4:16084271-16084290 | MS.gene51808:intron | 25.0% |
| !! | TTTGCAATTTTATGTTTCCT+TGG | + | chr3.4:16081654-16081673 | MS.gene51808:intron | 25.0% |
| !! | TTTTCCTCTTTCTAAGTTTT+AGG | + | chr3.4:16083659-16083678 | MS.gene51808:intron | 25.0% |
| !!! | AAGATGAAAAATGGATTGTT+CGG | + | chr3.4:16082185-16082204 | MS.gene51808:CDS | 25.0% |
| !!! | CCATTTTTCATCTTTTGAAA+TGG | - | chr3.4:16082179-16082198 | None:intergenic | 25.0% |
| !!! | CCGATATTTTAAAAATCGAA+CGG | + | chr3.4:16081835-16081854 | MS.gene51808:intron | 25.0% |
| !!! | CCGTTCGATTTTTAAAATAT+CGG | - | chr3.4:16081838-16081857 | None:intergenic | 25.0% |
| AAAAACTGTTGCAATAATGC+AGG | - | chr3.4:16082424-16082443 | None:intergenic | 30.0% | |
| AACTTGATGAGGATTTATAG+TGG | + | chr3.4:16083928-16083947 | MS.gene51808:intron | 30.0% | |
| AATTGAAGTTTGACACTTTC+AGG | + | chr3.4:16082572-16082591 | MS.gene51808:intron | 30.0% | |
| ACAATAAATGCAATGGACAA+AGG | - | chr3.4:16085491-16085510 | None:intergenic | 30.0% | |
| ACATATCTAATCCTAGATTC+TGG | + | chr3.4:16083970-16083989 | MS.gene51808:intron | 30.0% | |
| AGAATTCTCTGAATTCTAAC+AGG | - | chr3.4:16084493-16084512 | None:intergenic | 30.0% | |
| AGGTCGAAAAAAGATAAACA+TGG | - | chr3.4:16084473-16084492 | None:intergenic | 30.0% | |
| AGTATTCGAGTATTCTTACT+CGG | - | chr3.4:16084744-16084763 | None:intergenic | 30.0% | |
| AGTCATTGTTCAATTGAATG+TGG | + | chr3.4:16081697-16081716 | MS.gene51808:intron | 30.0% | |
| ATATACAATAAGTCCACATC+GGG | - | chr3.4:16083058-16083077 | None:intergenic | 30.0% | |
| ATGTACCAAAACAAAGAACT+TGG | + | chr3.4:16082503-16082522 | MS.gene51808:intron | 30.0% | |
| ATTCAAGCCAAATATCACAA+TGG | - | chr3.4:16082599-16082618 | None:intergenic | 30.0% | |
| ATTGAAGTTTGACACTTTCA+GGG | + | chr3.4:16082573-16082592 | MS.gene51808:intron | 30.0% | |
| CCACTCAAGTTAACAAAAAA+AGG | + | chr3.4:16085407-16085426 | MS.gene51808:CDS | 30.0% | |
| CTAATTTACTACAACCTCTT+AGG | + | chr3.4:16084117-16084136 | MS.gene51808:intron | 30.0% | |
| CTAGGAATAATAGATAGATC+AGG | + | chr3.4:16084675-16084694 | MS.gene51808:intron | 30.0% | |
| CTTCGACTTCTATAAATAGT+TGG | - | chr3.4:16084575-16084594 | None:intergenic | 30.0% | |
| GAAAGAGGAAAATAAAAGGA+TGG | - | chr3.4:16083651-16083670 | None:intergenic | 30.0% | |
| GAATAAAAACTGAACTCATC+AGG | - | chr3.4:16084171-16084190 | None:intergenic | 30.0% | |
| GACAAAGGATCTATGTATAT+TGG | - | chr3.4:16085476-16085495 | None:intergenic | 30.0% | |
| TAAAATTTCCGCAACTATAG+CGG | + | chr3.4:16084977-16084996 | MS.gene51808:intron | 30.0% | |
| TAATGTAGAAATACAGACCT+TGG | - | chr3.4:16081768-16081787 | None:intergenic | 30.0% | |
| TATGTAGGTAATGAGTTAAG+CGG | + | chr3.4:16083081-16083100 | MS.gene51808:intron | 30.0% | |
| TATTAAACCAATCAGCGAAT+TGG | - | chr3.4:16081867-16081886 | None:intergenic | 30.0% | |
| TATTGTAGGCAGACATTTAA+CGG | + | chr3.4:16083796-16083815 | MS.gene51808:CDS | 30.0% | |
| TCAAACATTCAATATCAACC+TGG | - | chr3.4:16085078-16085097 | None:intergenic | 30.0% | |
| TCAGAGACCATTAAAAAACA+CGG | + | chr3.4:16083523-16083542 | MS.gene51808:CDS | 30.0% | |
| TCTTACCAATTTCATTCAAC+AGG | + | chr3.4:16085214-16085233 | MS.gene51808:intron | 30.0% | |
| TGCTAGAAATGATGCAAATA+TGG | + | chr3.4:16084245-16084264 | MS.gene51808:intron | 30.0% | |
| TGGTTTAATCGATTAAACCA+CGG | - | chr3.4:16081941-16081922 | None:intergenic | 30.0% | |
| TTCCTTATCATAAAATCCAC+CGG | - | chr3.4:16083223-16083242 | None:intergenic | 30.0% | |
| ! | ACACATCTAGAATTCGTTTA+AGG | - | chr3.4:16083161-16083180 | None:intergenic | 30.0% |
| ! | ACACATTTGTGAATAGCTTT+TGG | + | chr3.4:16083614-16083633 | MS.gene51808:CDS | 30.0% |
| ! | ACACTCATCGATTGTAAATT+TGG | + | chr3.4:16081585-16081604 | MS.gene51808:CDS | 30.0% |
| ! | CAACATTGTTCTAAACCAAT+TGG | + | chr3.4:16083000-16083019 | MS.gene51808:intron | 30.0% |
| ! | GTGGATTTTATGATAAGGAA+TGG | + | chr3.4:16083223-16083242 | MS.gene51808:CDS | 30.0% |
| !! | ATGATCCATCATCTTTTTCA+TGG | - | chr3.4:16084794-16084813 | None:intergenic | 30.0% |
| !! | TGAATGTGGATTGATTTTTC+AGG | + | chr3.4:16081711-16081730 | MS.gene51808:intron | 30.0% |
| !!! | CCTTTTTTTGTTAACTTGAG+TGG | - | chr3.4:16085410-16085429 | None:intergenic | 30.0% |
| !!! | CTTCTGAGGTTATTATCTTT+TGG | - | chr3.4:16085362-16085381 | None:intergenic | 30.0% |
| AAAAGGGGATATTCCAACAA+CGG | + | chr3.4:16085424-16085443 | MS.gene51808:CDS | 35.0% | |
| AACTGAATAAACTCATCTCC+AGG | + | chr3.4:16085057-16085076 | MS.gene51808:intron | 35.0% | |
| AACTGTTAAAGCAAATGAGG+TGG | + | chr3.4:16085307-16085326 | MS.gene51808:CDS | 35.0% | |
| AAGATTGATGCATGGGAATT+TGG | + | chr3.4:16082721-16082740 | MS.gene51808:CDS | 35.0% | |
| ACCAGACTGGTAATAATGTT+TGG | + | chr3.4:16082635-16082654 | MS.gene51808:CDS | 35.0% | |
| ACTGGTAATAATGTTTGGGA+AGG | + | chr3.4:16082640-16082659 | MS.gene51808:CDS | 35.0% | |
| ACTTAGAGTAACTTGAAGAG+AGG | - | chr3.4:16081434-16081453 | None:intergenic | 35.0% | |
| ATATTTGAATGACTCGTCGT+AGG | + | chr3.4:16083728-16083747 | MS.gene51808:intron | 35.0% | |
| ATCTATAGTTGTCAAAGCCT+AGG | + | chr3.4:16082788-16082807 | MS.gene51808:intron | 35.0% | |
| ATCTTTACACATGCAAAGGT+GGG | + | chr3.4:16082220-16082239 | MS.gene51808:CDS | 35.0% | |
| ATGTGTTATACAAGAACTCG+AGG | + | chr3.4:16083175-16083194 | MS.gene51808:CDS | 35.0% | |
| CATGAACTATTGTTGTCTCT+CGG | - | chr3.4:16084398-16084417 | None:intergenic | 35.0% | |
| CATTAAAAAACACGGTCCTT+GGG | + | chr3.4:16083531-16083550 | MS.gene51808:CDS | 35.0% | |
| CCAGACTGGTAATAATGTTT+GGG | + | chr3.4:16082636-16082655 | MS.gene51808:CDS | 35.0% | |
| CGACGAGTCATTCAAATATT+CGG | - | chr3.4:16083727-16083746 | None:intergenic | 35.0% | |
| GGGGAAAACTACAATTAATG+CGG | + | chr3.4:16085003-16085022 | MS.gene51808:intron | 35.0% | |
| GTAGGAAAATTGAAGTCTAC+TGG | + | chr3.4:16082149-16082168 | MS.gene51808:CDS | 35.0% | |
| GTATTCGAGTATTCTTACTC+GGG | - | chr3.4:16084743-16084762 | None:intergenic | 35.0% | |
| GTTTCATAGTTGAGACACAT+AGG | + | chr3.4:16084352-16084371 | MS.gene51808:intron | 35.0% | |
| TCCTTATCATAAAATCCACC+GGG | - | chr3.4:16083222-16083241 | None:intergenic | 35.0% | |
| TCGAAGATAATTGCAGTTGT+TGG | + | chr3.4:16084589-16084608 | MS.gene51808:intron | 35.0% | |
| TCTATAGTTGTCAAAGCCTA+GGG | + | chr3.4:16082789-16082808 | MS.gene51808:intron | 35.0% | |
| TCTTATCCTCAAAGGTTTGA+GGG | - | chr3.4:16082093-16082112 | None:intergenic | 35.0% | |
| TGGGTACACAATAAATGCAA+TGG | - | chr3.4:16085498-16085517 | None:intergenic | 35.0% | |
| TGGTATGGTAGACTAGTATT+TGG | - | chr3.4:16083389-16083408 | None:intergenic | 35.0% | |
| TTTACTACAACCTCTTAGGA+AGG | + | chr3.4:16084121-16084140 | MS.gene51808:intron | 35.0% | |
| TTTATCACGTCTTTCGCATA+CGG | - | chr3.4:16083138-16083157 | None:intergenic | 35.0% | |
| TTTGGCATTTATCTGTCATC+TGG | + | chr3.4:16081891-16081910 | MS.gene51808:intron | 35.0% | |
| ! | AAACCTTTGAGGATAAGACT+TGG | + | chr3.4:16082095-16082114 | MS.gene51808:CDS | 35.0% |
| ! | AATGAACTGATTCAGATGCA+AGG | + | chr3.4:16084543-16084562 | MS.gene51808:intron | 35.0% |
| ! | ACAACACTGTTTAGACCTTT+TGG | - | chr3.4:16082824-16082843 | None:intergenic | 35.0% |
| ! | ATGAACTGATTCAGATGCAA+GGG | + | chr3.4:16084544-16084563 | MS.gene51808:intron | 35.0% |
| ! | GCTATAGTTGCGGAAATTTT+AGG | - | chr3.4:16084978-16084997 | None:intergenic | 35.0% |
| ! | GGATTGTTCGGATTTTCAAA+GGG | + | chr3.4:16082197-16082216 | MS.gene51808:CDS | 35.0% |
| ! | TACCCTGTCTTTTGAACAAT+GGG | - | chr3.4:16084091-16084110 | None:intergenic | 35.0% |
| ! | TGGATTGTTCGGATTTTCAA+AGG | + | chr3.4:16082196-16082215 | MS.gene51808:CDS | 35.0% |
| ! | TGTTTTCAGAACCAGAATCT+AGG | - | chr3.4:16083984-16084003 | None:intergenic | 35.0% |
| ! | TTACCCTGTCTTTTGAACAA+TGG | - | chr3.4:16084092-16084111 | None:intergenic | 35.0% |
| !! | CAAAGAGTATCTGAGATATC+AGG | + | chr3.4:16082453-16082472 | MS.gene51808:intron | 35.0% |
| !! | CATGGTTTGCTACTAGTAAA+TGG | + | chr3.4:16081466-16081485 | MS.gene51808:CDS | 35.0% |
| !! | GACATCCAAGTTCTTTGTTT+TGG | - | chr3.4:16082511-16082530 | None:intergenic | 35.0% |
| AAATGAGGTGGCCAAATTCA+GGG | + | chr3.4:16085319-16085338 | MS.gene51808:CDS | 40.0% | |
| AACAACAGGGAAGACTAAAG+CGG | - | chr3.4:16083034-16083053 | None:intergenic | 40.0% | |
| AAGATAAACATGGCTGTCAG+TGG | - | chr3.4:16084463-16084482 | None:intergenic | 40.0% | |
| ACAATAGCACTGTTGCATAG+TGG | - | chr3.4:16082885-16082904 | None:intergenic | 40.0% | |
| ACATTTAACGGAGGGAACTA+TGG | + | chr3.4:16083808-16083827 | MS.gene51808:CDS | 40.0% | |
| ACCAATTTCATTCAACAGGC+TGG | + | chr3.4:16085218-16085237 | MS.gene51808:intron | 40.0% | |
| ACCAGCCTGTTGAATGAAAT+TGG | - | chr3.4:16085222-16085241 | None:intergenic | 40.0% | |
| ACCTAATCGCATGATCAAAG+TGG | + | chr3.4:16083480-16083499 | MS.gene51808:CDS | 40.0% | |
| ACGAAGCTTCTTCAGATTTC+TGG | + | chr3.4:16083249-16083268 | MS.gene51808:CDS | 40.0% | |
| AGAAGAGAAAGTGAGTGTAG+CGG | - | chr3.4:16082313-16082332 | None:intergenic | 40.0% | |
| AGAATGACACTGAATCAACC+AGG | - | chr3.4:16085112-16085131 | None:intergenic | 40.0% | |
| AGGAGCCATGAAAAAGATGA+TGG | + | chr3.4:16084786-16084805 | MS.gene51808:intron | 40.0% | |
| AGGGATACAAGATTGATGCA+TGG | + | chr3.4:16082713-16082732 | MS.gene51808:CDS | 40.0% | |
| AGGGATCTTTACACATGCAA+AGG | + | chr3.4:16082216-16082235 | MS.gene51808:CDS | 40.0% | |
| ATACAGACCTTGGATTGCTT+TGG | - | chr3.4:16081758-16081777 | None:intergenic | 40.0% | |
| CCAAAAGGAGAAACAATGCA+AGG | - | chr3.4:16081411-16081430 | None:intergenic | 40.0% | |
| CCATTAAAAAACACGGTCCT+TGG | + | chr3.4:16083530-16083549 | MS.gene51808:CDS | 40.0% | |
| CCCAAACATTATTACCAGTC+TGG | - | chr3.4:16082639-16082658 | None:intergenic | 40.0% | |
| CCTCATGATAAATGCAACGA+CGG | + | chr3.4:16081547-16081566 | MS.gene51808:CDS | 40.0% | |
| CGTAGGTACTTAGATCAACT+GGG | + | chr3.4:16083745-16083764 | MS.gene51808:intron | 40.0% | |
| CTATAGTTGTCAAAGCCTAG+GGG | + | chr3.4:16082790-16082809 | MS.gene51808:intron | 40.0% | |
| CTTCATTCTGTTGGGAATGA+CGG | - | chr3.4:16084929-16084948 | None:intergenic | 40.0% | |
| GAATTACGATTACGTGTGGT+AGG | + | chr3.4:16082542-16082561 | MS.gene51808:intron | 40.0% | |
| GATCTCACATTATTGTGCAC+TGG | - | chr3.4:16085452-16085471 | None:intergenic | 40.0% | |
| GATCTTTACACATGCAAAGG+TGG | + | chr3.4:16082219-16082238 | MS.gene51808:CDS | 40.0% | |
| GGCACCTAAAACTTAGAAAG+AGG | - | chr3.4:16083666-16083685 | None:intergenic | 40.0% | |
| GGGATACAAGATTGATGCAT+GGG | + | chr3.4:16082714-16082733 | MS.gene51808:CDS | 40.0% | |
| GGTAGAATTACGATTACGTG+TGG | + | chr3.4:16082538-16082557 | MS.gene51808:intron | 40.0% | |
| GTCTTATCCTCAAAGGTTTG+AGG | - | chr3.4:16082094-16082113 | None:intergenic | 40.0% | |
| GTGATACTCTTCCCTGAATT+TGG | - | chr3.4:16085333-16085352 | None:intergenic | 40.0% | |
| GTGTTGCAGACTAACAATGT+AGG | + | chr3.4:16084949-16084968 | MS.gene51808:intron | 40.0% | |
| TAACTTGAAGAGAGGCCAAA+AGG | - | chr3.4:16081426-16081445 | None:intergenic | 40.0% | |
| TCAGAGGCTTCAAATCTAGT+GGG | + | chr3.4:16084832-16084851 | MS.gene51808:intron | 40.0% | |
| TCATTTGCGCTACGATTGAT+TGG | + | chr3.4:16081521-16081540 | MS.gene51808:CDS | 40.0% | |
| TCCACTTTGATCATGCGATT+AGG | - | chr3.4:16083484-16083503 | None:intergenic | 40.0% | |
| TCGATTAAACCATGACTCAG+AGG | + | chr3.4:16081930-16081949 | MS.gene51808:intron | 40.0% | |
| TCGTAGGTACTTAGATCAAC+TGG | + | chr3.4:16083744-16083763 | MS.gene51808:intron | 40.0% | |
| TGCAACACCTTCATTCTGTT+GGG | - | chr3.4:16084937-16084956 | None:intergenic | 40.0% | |
| TTCAGGGCCATTGTGATATT+TGG | + | chr3.4:16082589-16082608 | MS.gene51808:intron | 40.0% | |
| ! | AAGCTGGAGCATCAAAGTTT+GGG | - | chr3.4:16085517-16085536 | None:intergenic | 40.0% |
| ! | GATAACATTTTGCTCGCGTA+TGG | + | chr3.4:16082924-16082943 | MS.gene51808:intron | 40.0% |
| !! | ACCCGGTGGATTTTATGATA+AGG | + | chr3.4:16083218-16083237 | MS.gene51808:CDS | 40.0% |
| !! | CCTTGCATTGTTTCTCCTTT+TGG | + | chr3.4:16081408-16081427 | MS.gene51808:CDS | 40.0% |
| !! | CTTCTTCAGATTTCTGGTTC+AGG | + | chr3.4:16083255-16083274 | MS.gene51808:CDS | 40.0% |
| !!! | CCAAGGACCGTGTTTTTTAA+TGG | - | chr3.4:16083533-16083552 | None:intergenic | 40.0% |
| AAACCAATCAGCGAATTGGC+TGG | - | chr3.4:16081863-16081882 | None:intergenic | 45.0% | |
| AACGACGGCTATTGTTCTTG+GGG | + | chr3.4:16081562-16081581 | MS.gene51808:CDS | 45.0% | |
| AATACTCCCTTGCAAGCTCA+AGG | + | chr3.4:16084758-16084777 | MS.gene51808:intron | 45.0% | |
| ACGCCCATTGTTCAAAAGAC+AGG | + | chr3.4:16084085-16084104 | MS.gene51808:CDS | 45.0% | |
| AGAACTTGGATGTCTGTGTC+AGG | + | chr3.4:16082517-16082536 | MS.gene51808:intron | 45.0% | |
| ATAAGCATTTGTAGGGTCCC+AGG | - | chr3.4:16082668-16082687 | None:intergenic | 45.0% | |
| ATAATGTTTGGGAAGGAGCC+TGG | + | chr3.4:16082647-16082666 | MS.gene51808:CDS | 45.0% | |
| ATCCTTGCCAAAGCAATCCA+AGG | + | chr3.4:16081748-16081767 | MS.gene51808:CDS | 45.0% | |
| ATGTGAGTGACAAGCAAACC+TGG | - | chr3.4:16083321-16083340 | None:intergenic | 45.0% | |
| CAAATGAGGTGGCCAAATTC+AGG | + | chr3.4:16085318-16085337 | MS.gene51808:CDS | 45.0% | |
| CAACGACGGCTATTGTTCTT+GGG | + | chr3.4:16081561-16081580 | MS.gene51808:CDS | 45.0% | |
| CAGCAGTCAAGAACATCACT+AGG | - | chr3.4:16084425-16084444 | None:intergenic | 45.0% | |
| CATATATACAACTTGGGCCC+AGG | + | chr3.4:16083300-16083319 | MS.gene51808:CDS | 45.0% | |
| CCGTCGTTGCATTTATCATG+AGG | - | chr3.4:16081550-16081569 | None:intergenic | 45.0% | |
| CGCCCATTGTTCAAAAGACA+GGG | + | chr3.4:16084086-16084105 | MS.gene51808:CDS | 45.0% | |
| CGTCATTCCCAACAGAATGA+AGG | + | chr3.4:16084927-16084946 | MS.gene51808:intron | 45.0% | |
| CTCAGAGGCTTCAAATCTAG+TGG | + | chr3.4:16084831-16084850 | MS.gene51808:intron | 45.0% | |
| CTCCTAATCCTGACTACTAC+AGG | + | chr3.4:16083854-16083873 | MS.gene51808:CDS | 45.0% | |
| CTGAAAACAGCGCACTATTG+TGG | + | chr3.4:16083995-16084014 | MS.gene51808:intron | 45.0% | |
| CTGATGGGAAAGAAGGTTCT+TGG | + | chr3.4:16084024-16084043 | MS.gene51808:CDS | 45.0% | |
| CTGCAACACCTTCATTCTGT+TGG | - | chr3.4:16084938-16084957 | None:intergenic | 45.0% | |
| GGTAATGAGTTAAGCGGTGA+AGG | + | chr3.4:16083087-16083106 | MS.gene51808:intron | 45.0% | |
| GTAGGCAGACATTTAACGGA+GGG | + | chr3.4:16083800-16083819 | MS.gene51808:CDS | 45.0% | |
| TAATGTTTGGGAAGGAGCCT+GGG | + | chr3.4:16082648-16082667 | MS.gene51808:CDS | 45.0% | |
| TATACGTGCCTGTAGTAGTC+AGG | - | chr3.4:16083865-16083884 | None:intergenic | 45.0% | |
| TGAGAGTGGAGGAATTGAGA+AGG | - | chr3.4:16083834-16083853 | None:intergenic | 45.0% | |
| TGATAGCCCTCAAACCTTTG+AGG | + | chr3.4:16082084-16082103 | MS.gene51808:intron | 45.0% | |
| TGCCTGTAGTAGTCAGGATT+AGG | - | chr3.4:16083859-16083878 | None:intergenic | 45.0% | |
| TGGATCATACACACTGAGCT+TGG | + | chr3.4:16084806-16084825 | MS.gene51808:intron | 45.0% | |
| TGGATTGCTTTGGCAAGGAT+AGG | - | chr3.4:16081748-16081767 | None:intergenic | 45.0% | |
| TGGGCGTAAGTGCGTAAAAA+TGG | - | chr3.4:16084072-16084091 | None:intergenic | 45.0% | |
| TGTAGGCAGACATTTAACGG+AGG | + | chr3.4:16083799-16083818 | MS.gene51808:CDS | 45.0% | |
| TGTGAGTGACAAGCAAACCT+GGG | - | chr3.4:16083320-16083339 | None:intergenic | 45.0% | |
| TTCCTACGTTATACACCACC+TGG | - | chr3.4:16082136-16082155 | None:intergenic | 45.0% | |
| TTTGCGCTACGATTGATTGG+TGG | + | chr3.4:16081524-16081543 | MS.gene51808:CDS | 45.0% | |
| ! | AAAGCGGTCTGAAGTCCAAT+TGG | - | chr3.4:16083018-16083037 | None:intergenic | 45.0% |
| ! | AACATGGCTGTCAGTGGTTT+TGG | - | chr3.4:16084457-16084476 | None:intergenic | 45.0% |
| ! | AACATTTTGCTCGCGTATGG+CGG | + | chr3.4:16082927-16082946 | MS.gene51808:intron | 45.0% |
| ! | AACTGATTCAGATGCAAGGG+AGG | + | chr3.4:16084547-16084566 | MS.gene51808:intron | 45.0% |
| ! | ACATGGCTGTCAGTGGTTTT+GGG | - | chr3.4:16084456-16084475 | None:intergenic | 45.0% |
| ! | CAAGCTGGAGCATCAAAGTT+TGG | - | chr3.4:16085518-16085537 | None:intergenic | 45.0% |
| ! | CCTCCAAGTCTTATCCTCAA+AGG | - | chr3.4:16082101-16082120 | None:intergenic | 45.0% |
| ! | CCTTTGAGGATAAGACTTGG+AGG | + | chr3.4:16082098-16082117 | MS.gene51808:CDS | 45.0% |
| !! | ACAGGTTAGCTTGCTTTCCA+AGG | - | chr3.4:16081674-16081693 | None:intergenic | 45.0% |
| ACACTGAGCTTGGATCTCAG+AGG | + | chr3.4:16084816-16084835 | MS.gene51808:intron | 50.0% | |
| ACAGCGCACTATTGTGGCAT+CGG | + | chr3.4:16084001-16084020 | MS.gene51808:intron | 50.0% | |
| AGGATTAGGAGTGAGAGTGG+AGG | - | chr3.4:16083845-16083864 | None:intergenic | 50.0% | |
| AGTCCACATCGGGTAACAAC+AGG | - | chr3.4:16083048-16083067 | None:intergenic | 50.0% | |
| CTAGGGGTTCATGGTCCAAA+AGG | + | chr3.4:16082806-16082825 | MS.gene51808:intron | 50.0% | |
| GAACCAGCCAATTCGCTGAT+TGG | + | chr3.4:16081857-16081876 | MS.gene51808:intron | 50.0% | |
| GACCAGGTGGTGTATAACGT+AGG | + | chr3.4:16082131-16082150 | MS.gene51808:CDS | 50.0% | |
| GACCTTGGATTGCTTTGGCA+AGG | - | chr3.4:16081753-16081772 | None:intergenic | 50.0% | |
| GCAACATGGTATGGCTTCTG+AGG | - | chr3.4:16085376-16085395 | None:intergenic | 50.0% | |
| GCAACGACGGCTATTGTTCT+TGG | + | chr3.4:16081560-16081579 | MS.gene51808:CDS | 50.0% | |
| GCAGCTAACAGTGGTGGTAT+TGG | + | chr3.4:16083583-16083602 | MS.gene51808:CDS | 50.0% | |
| GTCAGGATTAGGAGTGAGAG+TGG | - | chr3.4:16083848-16083867 | None:intergenic | 50.0% | |
| GTCCACATCGGGTAACAACA+GGG | - | chr3.4:16083047-16083066 | None:intergenic | 50.0% | |
| TACCCACCTTGAGCTTGCAA+GGG | - | chr3.4:16084767-16084786 | None:intergenic | 50.0% | |
| TGGGAGAGAGAGCCTTAGTT+AGG | + | chr3.4:16084851-16084870 | MS.gene51808:intron | 50.0% | |
| TGTCAAAGCCTAGGGGTTCA+TGG | + | chr3.4:16082797-16082816 | MS.gene51808:intron | 50.0% | |
| TTCCCTGTTGTTACCCGATG+TGG | + | chr3.4:16083042-16083061 | MS.gene51808:intron | 50.0% | |
| TTCCGCAACTATAGCGGCTA+GGG | + | chr3.4:16084983-16085002 | MS.gene51808:intron | 50.0% | |
| TTGTGCACTGGATCCGTTGT+TGG | - | chr3.4:16085440-16085459 | None:intergenic | 50.0% | |
| TTTCCGCAACTATAGCGGCT+AGG | + | chr3.4:16084982-16085001 | MS.gene51808:intron | 50.0% | |
| ! | CTTTTGGACCATGAACCCCT+AGG | - | chr3.4:16082808-16082827 | None:intergenic | 50.0% |
| ! | TCTGTCATCTGGTTCAACCG+TGG | + | chr3.4:16081902-16081921 | MS.gene51808:intron | 50.0% |
| ! | TTGGCTTGAATGCGCTCCAT+GGG | + | chr3.4:16082608-16082627 | MS.gene51808:CDS | 50.0% |
| !! | ACTATTGTGGCATCGGCTGA+TGG | + | chr3.4:16084008-16084027 | MS.gene51808:CDS | 50.0% |
| !! | CATGGCTGTCAGTGGTTTTG+GGG | - | chr3.4:16084455-16084474 | None:intergenic | 50.0% |
| !! | CTATTGTGGCATCGGCTGAT+GGG | + | chr3.4:16084009-16084028 | MS.gene51808:CDS | 50.0% |
| !! | TTTGGCTTGAATGCGCTCCA+TGG | + | chr3.4:16082607-16082626 | MS.gene51808:CDS | 50.0% |
| AAACCCTCACTTGCAGCACC+CGG | + | chr3.4:16083201-16083220 | MS.gene51808:CDS | 55.0% | |
| ACTCCCTTGCAAGCTCAAGG+TGG | + | chr3.4:16084761-16084780 | MS.gene51808:intron | 55.0% | |
| AGGTTCTCTGCAAGACCAGG+TGG | + | chr3.4:16082118-16082137 | MS.gene51808:CDS | 55.0% | |
| CCATGACTCAGAGGTCTCAG+CGG | + | chr3.4:16081939-16081958 | MS.gene51808:intron | 55.0% | |
| CTACCCACCTTGAGCTTGCA+AGG | - | chr3.4:16084768-16084787 | None:intergenic | 55.0% | |
| CTCCCTTGCAAGCTCAAGGT+GGG | + | chr3.4:16084762-16084781 | MS.gene51808:intron | 55.0% | |
| CTTGCAAGCTCAAGGTGGGT+AGG | + | chr3.4:16084766-16084785 | MS.gene51808:intron | 55.0% | |
| GGTCTCAGCGGTTTGATCTC+CGG | + | chr3.4:16081951-16081970 | MS.gene51808:intron | 55.0% | |
| TACCAGTCTGGTGCTTCCCA+TGG | - | chr3.4:16082627-16082646 | None:intergenic | 55.0% | |
| TCCCCTAGCCGCTATAGTTG+CGG | - | chr3.4:16084988-16085007 | None:intergenic | 55.0% | |
| TCCGCAACTATAGCGGCTAG+GGG | + | chr3.4:16084984-16085003 | MS.gene51808:intron | 55.0% | |
| TCTGCATGGGTAGGAGAAGC+TGG | + | chr3.4:16083556-16083575 | MS.gene51808:CDS | 55.0% | |
| TGGAGGTTCTCTGCAAGACC+AGG | + | chr3.4:16082115-16082134 | MS.gene51808:CDS | 55.0% | |
| TTGATGCTCCAGCTTGTGCC+AGG | + | chr3.4:16085522-16085541 | MS.gene51808:CDS | 55.0% | |
| ! | GAGTTAAGCGGTGAAGGCGT+TGG | + | chr3.4:16083093-16083112 | MS.gene51808:CDS | 55.0% |
| !! | GAAGGCGTTGGTGCATCAGT+CGG | + | chr3.4:16083105-16083124 | MS.gene51808:CDS | 55.0% |
| !! | GCATCGGCTGATGGGAAAGA+AGG | + | chr3.4:16084017-16084036 | MS.gene51808:CDS | 55.0% |
| ACGGTCCTTGGGCTTCTGCA+TGG | + | chr3.4:16083542-16083561 | MS.gene51808:CDS | 60.0% | |
| ATGGGTAGGAGAAGCTGGCG+GGG | + | chr3.4:16083561-16083580 | MS.gene51808:CDS | 60.0% | |
| CATGGGTAGGAGAAGCTGGC+GGG | + | chr3.4:16083560-16083579 | MS.gene51808:CDS | 60.0% | |
| CCGCTGAGACCTCTGAGTCA+TGG | - | chr3.4:16081942-16081961 | None:intergenic | 60.0% | |
| CCTACCCATGCAGAAGCCCA+AGG | - | chr3.4:16083550-16083569 | None:intergenic | 60.0% | |
| CCTTGGGCTTCTGCATGGGT+AGG | + | chr3.4:16083547-16083566 | MS.gene51808:CDS | 60.0% | |
| CGGTCCTTGGGCTTCTGCAT+GGG | + | chr3.4:16083543-16083562 | MS.gene51808:CDS | 60.0% | |
| GCATGGGTAGGAGAAGCTGG+CGG | + | chr3.4:16083559-16083578 | MS.gene51808:CDS | 60.0% | |
| !! | CTCCATGGGAAGCACCAGAC+TGG | + | chr3.4:16082622-16082641 | MS.gene51808:CDS | 60.0% |
| ! | CCACCGGGTGCTGCAAGTGA+GGG | - | chr3.4:16083207-16083226 | None:intergenic | 65.0% |
| ! | TCCACCGGGTGCTGCAAGTG+AGG | - | chr3.4:16083208-16083227 | None:intergenic | 65.0% |
| CCCTCACTTGCAGCACCCGG+TGG | + | chr3.4:16083204-16083223 | MS.gene51808:CDS | 70.0% | |
| GCTGGCGGGGCAGCTAACAG+TGG | + | chr3.4:16083574-16083593 | MS.gene51808:CDS | 70.0% | |
| GGCGGGGCAGCTAACAGTGG+TGG | + | chr3.4:16083577-16083596 | MS.gene51808:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 16081397 | 16085550 | 16081397 | ID=MS.gene51808 |
| chr3.4 | mRNA | 16081397 | 16085550 | 16081397 | ID=MS.gene51808.t1;Parent=MS.gene51808 |
| chr3.4 | exon | 16081397 | 16081606 | 16081397 | ID=MS.gene51808.t1.exon1;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16081397 | 16081606 | 16081397 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16081733 | 16081769 | 16081733 | ID=MS.gene51808.t1.exon2;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16081733 | 16081769 | 16081733 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16082090 | 16082273 | 16082090 | ID=MS.gene51808.t1.exon3;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16082090 | 16082273 | 16082090 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16082594 | 16082742 | 16082594 | ID=MS.gene51808.t1.exon4;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16082594 | 16082742 | 16082594 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16083088 | 16083321 | 16083088 | ID=MS.gene51808.t1.exon5;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16083088 | 16083321 | 16083088 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16083446 | 16083635 | 16083446 | ID=MS.gene51808.t1.exon6;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16083446 | 16083635 | 16083446 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16083750 | 16083875 | 16083750 | ID=MS.gene51808.t1.exon7;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16083750 | 16083875 | 16083750 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16084005 | 16084107 | 16084005 | ID=MS.gene51808.t1.exon8;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16084005 | 16084107 | 16084005 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| chr3.4 | exon | 16085236 | 16085550 | 16085236 | ID=MS.gene51808.t1.exon9;Parent=MS.gene51808.t1 |
| chr3.4 | CDS | 16085236 | 16085550 | 16085236 | ID=cds.MS.gene51808.t1;Parent=MS.gene51808.t1 |
| Gene Sequence |
| Protein sequence |
