Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50879.t1 | XP_013459051.1 | 88.1 | 519 | 58 | 2 | 1 | 515 | 1 | 519 | 1.10E-272 | 948.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50879.t1 | Q8L608 | 57.8 | 540 | 200 | 3 | 1 | 513 | 1 | 539 | 6.0e-187 | 655.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50879.t1 | A0A072UTC9 | 88.1 | 519 | 58 | 2 | 1 | 515 | 1 | 519 | 7.9e-273 | 948.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene50879 | 0.809895 | 1.51E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene50879 | 0.863588 | 2.24E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene50879 | 0.855594 | 5.68E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene50879 | 0.865506 | 5.62E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene50879 | 0.864254 | 1.39E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene50879 | 0.877995 | 4.02E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene50879 | 0.846521 | 2.06E-59 | -1.69E-46 |
| MS.gene049396 | MS.gene50879 | 0.850806 | 1.34E-60 | -1.69E-46 |
| MS.gene049600 | MS.gene50879 | 0.811103 | 8.28E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene50879 | 0.823691 | 1.21E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene50879 | 0.826941 | 2.06E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene50879 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene049828 | MS.gene50879 | 0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene50879 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene50879 | 0.856688 | 2.72E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene50879 | 0.84519 | 4.74E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene50879 | 0.841268 | 5.27E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene50879 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene50879 | 0.869423 | 3.13E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene50879 | 0.839115 | 1.92E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene50879 | 0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene050380 | MS.gene50879 | -0.805759 | 1.14E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene50879 | -0.807015 | 6.21E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene50879 | 0.815571 | 8.63E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene50879 | 0.816273 | 6.02E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene50879 | 0.821328 | 4.28E-53 | -1.69E-46 |
| MS.gene050502 | MS.gene50879 | 0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene50879 | 0.870095 | 1.89E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene50879 | 0.859621 | 3.64E-63 | -1.69E-46 |
| MS.gene050520 | MS.gene50879 | 0.822106 | 2.83E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene50879 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene50879 | 0.816683 | 4.87E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene50879 | 0.86414 | 1.51E-64 | -1.69E-46 |
| MS.gene050662 | MS.gene50879 | 0.846274 | 2.41E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene50879 | 0.857714 | 1.35E-62 | -1.69E-46 |
| MS.gene050686 | MS.gene50879 | 0.837343 | 5.50E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene50879 | 0.82599 | 3.47E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene50879 | 0.864689 | 1.02E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene50879 | 0.830322 | 3.13E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene50879 | 0.863045 | 3.29E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene50879 | 0.865708 | 4.85E-65 | -1.69E-46 |
| MS.gene050876 | MS.gene50879 | 0.808453 | 3.07E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene50879 | 0.802283 | 6.04E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene50879 | 0.843087 | 1.74E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene50879 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene50879 | -0.800062 | 1.72E-48 | -1.69E-46 |
| MS.gene051127 | MS.gene50879 | -0.803506 | 3.38E-49 | -1.69E-46 |
| MS.gene05118 | MS.gene50879 | 0.800225 | 1.59E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene50879 | 0.824702 | 6.99E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene50879 | 0.816386 | 5.68E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene50879 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene051509 | MS.gene50879 | 0.854715 | 1.02E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene50879 | 0.841333 | 5.06E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene50879 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene50879 | 0.806453 | 8.17E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene50879 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene50879 | 0.848234 | 6.98E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene50879 | 0.849005 | 4.27E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene50879 | 0.866269 | 3.22E-65 | -1.69E-46 |
| MS.gene051949 | MS.gene50879 | 0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene052066 | MS.gene50879 | 0.80054 | 1.37E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene50879 | 0.841112 | 5.79E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene50879 | 0.820685 | 6.02E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene50879 | 0.823314 | 1.48E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene50879 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene50879 | 0.815678 | 8.18E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene50879 | 0.821334 | 4.27E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene50879 | 0.817537 | 3.13E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene50879 | 0.830678 | 2.57E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene50879 | 0.812558 | 3.99E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene50879 | 0.814749 | 1.31E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene50879 | 0.832376 | 9.79E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene50879 | 0.822515 | 2.27E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene50879 | 0.820333 | 7.25E-53 | -1.69E-46 |
| MS.gene053018 | MS.gene50879 | 0.839894 | 1.21E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene50879 | 0.821851 | 3.24E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene50879 | 0.815498 | 8.96E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene50879 | 0.851557 | 8.21E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene50879 | 0.8551 | 7.91E-62 | -1.69E-46 |
| MS.gene053420 | MS.gene50879 | -0.826528 | 2.58E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene50879 | 0.828821 | 7.26E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene50879 | 0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene053505 | MS.gene50879 | 0.817674 | 2.92E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene50879 | 0.859784 | 3.26E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene50879 | 0.850766 | 1.37E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene50879 | 0.838534 | 2.72E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene50879 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene50879 | 0.83996 | 1.16E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene50879 | 0.834318 | 3.21E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene50879 | 0.866146 | 3.53E-65 | -1.69E-46 |
| MS.gene054003 | MS.gene50879 | 0.856125 | 3.98E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene50879 | 0.847973 | 8.24E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene50879 | 0.824336 | 8.53E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene50879 | 0.869398 | 3.19E-66 | -1.69E-46 |
| MS.gene054706 | MS.gene50879 | -0.804317 | 2.29E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene50879 | -0.811749 | 5.99E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene50879 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene50879 | 0.827245 | 1.74E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene50879 | 0.860925 | 1.47E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene50879 | 0.849617 | 2.88E-60 | -1.69E-46 |
| MS.gene055154 | MS.gene50879 | -0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene50879 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene50879 | 0.824298 | 8.71E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene50879 | 0.848412 | 6.23E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene50879 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene50879 | 0.845697 | 3.46E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene50879 | 0.857413 | 1.66E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene50879 | 0.871386 | 7.11E-67 | -1.69E-46 |
| MS.gene055748 | MS.gene50879 | 0.809112 | 2.22E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene50879 | 0.832162 | 1.11E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene50879 | 0.82526 | 5.16E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene50879 | 0.817244 | 3.65E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene50879 | 0.808295 | 3.32E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene50879 | 0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene50879 | 0.864414 | 1.24E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene50879 | 0.849161 | 3.86E-60 | -1.69E-46 |
| MS.gene056046 | MS.gene50879 | 0.807946 | 3.94E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene50879 | 0.856837 | 2.46E-62 | -1.69E-46 |
| MS.gene056387 | MS.gene50879 | 0.816617 | 5.04E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene50879 | 0.861403 | 1.05E-63 | -1.69E-46 |
| MS.gene056448 | MS.gene50879 | 0.832968 | 6.98E-56 | -1.69E-46 |
| MS.gene056487 | MS.gene50879 | 0.839909 | 1.20E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene50879 | 0.861137 | 1.27E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene50879 | 0.85319 | 2.81E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene50879 | 0.820985 | 5.14E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene50879 | 0.824568 | 7.52E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene50879 | 0.808576 | 2.89E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene50879 | 0.871144 | 8.55E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene50879 | 0.835909 | 1.28E-56 | -1.69E-46 |
| MS.gene056878 | MS.gene50879 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene50879 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene50879 | 0.848078 | 7.71E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene50879 | 0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene50879 | 0.821132 | 4.75E-53 | -1.69E-46 |
| MS.gene057285 | MS.gene50879 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene50879 | 0.831713 | 1.43E-55 | -1.69E-46 |
| MS.gene05735 | MS.gene50879 | 0.807942 | 3.95E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene50879 | 0.832297 | 1.02E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene50879 | 0.827851 | 1.25E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene50879 | 0.806741 | 7.10E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene50879 | 0.823132 | 1.63E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene50879 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene50879 | 0.901739 | 1.98E-78 | -1.69E-46 |
| MS.gene058117 | MS.gene50879 | -0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene50879 | 0.838381 | 2.98E-57 | -1.69E-46 |
| MS.gene058157 | MS.gene50879 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene50879 | 0.823414 | 1.40E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene50879 | 0.859843 | 3.12E-63 | -1.69E-46 |
| MS.gene058459 | MS.gene50879 | 0.844452 | 7.49E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene50879 | 0.838609 | 2.60E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene50879 | 0.850238 | 1.93E-60 | -1.69E-46 |
| MS.gene058840 | MS.gene50879 | -0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene50879 | 0.847893 | 8.67E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene50879 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene50879 | -0.811491 | 6.82E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene50879 | 0.86497 | 8.29E-65 | -1.69E-46 |
| MS.gene059305 | MS.gene50879 | 0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene50879 | 0.820951 | 5.23E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene50879 | 0.865763 | 4.66E-65 | -1.69E-46 |
| MS.gene059368 | MS.gene50879 | 0.841234 | 5.38E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene50879 | 0.846916 | 1.61E-59 | -1.69E-46 |
| MS.gene059680 | MS.gene50879 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene059699 | MS.gene50879 | -0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene50879 | -0.80957 | 1.77E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene50879 | 0.835239 | 1.88E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene50879 | 0.849536 | 3.04E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene50879 | 0.808039 | 3.77E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene50879 | 0.886498 | 3.25E-72 | -1.69E-46 |
| MS.gene05986 | MS.gene50879 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene50879 | 0.84058 | 7.98E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene50879 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene060193 | MS.gene50879 | 0.802744 | 4.85E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene50879 | 0.878307 | 3.12E-69 | -1.69E-46 |
| MS.gene060595 | MS.gene50879 | -0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene50879 | 0.835186 | 1.94E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene50879 | 0.844132 | 9.13E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene50879 | 0.860089 | 2.63E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene50879 | 0.830544 | 2.77E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene50879 | 0.836635 | 8.34E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene50879 | 0.845885 | 3.07E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene50879 | 0.841034 | 6.07E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene50879 | 0.824505 | 7.79E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene50879 | 0.854001 | 1.65E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene50879 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene50879 | 0.885277 | 9.34E-72 | -1.69E-46 |
| MS.gene061150 | MS.gene50879 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene50879 | 0.826162 | 3.16E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69310 | MS.gene50879 | PPI |
| MS.gene033078 | MS.gene50879 | PPI |
| MS.gene036317 | MS.gene50879 | PPI |
| MS.gene033803 | MS.gene50879 | PPI |
| MS.gene50879 | MS.gene95198 | PPI |
| MS.gene51808 | MS.gene50879 | PPI |
| MS.gene036682 | MS.gene50879 | PPI |
| MS.gene57996 | MS.gene50879 | PPI |
| MS.gene044430 | MS.gene50879 | PPI |
| MS.gene50879 | MS.gene95196 | PPI |
| MS.gene50879 | MS.gene063475 | PPI |
| MS.gene50879 | MS.gene69866 | PPI |
| MS.gene057928 | MS.gene50879 | PPI |
| MS.gene041370 | MS.gene50879 | PPI |
| MS.gene50879 | MS.gene041370 | PPI |
| MS.gene78493 | MS.gene50879 | PPI |
| MS.gene50879 | MS.gene057926 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50879.t1 | MTR_3g023710 | 88.269 | 520 | 55 | 3 | 1 | 515 | 1 | 519 | 0.0 | 944 |
| MS.gene50879.t1 | MTR_3g023700 | 83.172 | 517 | 85 | 1 | 1 | 515 | 1 | 517 | 0.0 | 902 |
| MS.gene50879.t1 | MTR_3g023690 | 83.946 | 517 | 80 | 2 | 1 | 515 | 1 | 516 | 0.0 | 900 |
| MS.gene50879.t1 | MTR_4g109300 | 67.343 | 542 | 147 | 2 | 1 | 512 | 1 | 542 | 0.0 | 744 |
| MS.gene50879.t1 | MTR_4g109300 | 63.368 | 576 | 147 | 3 | 1 | 512 | 1 | 576 | 0.0 | 727 |
| MS.gene50879.t1 | MTR_4g109300 | 67.118 | 517 | 140 | 2 | 1 | 487 | 1 | 517 | 0.0 | 706 |
| MS.gene50879.t1 | MTR_3g023690 | 81.769 | 373 | 66 | 1 | 145 | 515 | 56 | 428 | 0.0 | 637 |
| MS.gene50879.t1 | MTR_4g109300 | 65.995 | 397 | 105 | 2 | 146 | 512 | 1 | 397 | 0.0 | 541 |
| MS.gene50879.t1 | MTR_5g043710 | 50.493 | 507 | 241 | 4 | 9 | 513 | 6 | 504 | 0.0 | 523 |
| MS.gene50879.t1 | MTR_2g451510 | 47.736 | 530 | 255 | 6 | 3 | 513 | 11 | 537 | 3.86e-171 | 494 |
| MS.gene50879.t1 | MTR_4g116070 | 49.190 | 494 | 243 | 5 | 25 | 513 | 39 | 529 | 1.10e-160 | 467 |
| MS.gene50879.t1 | MTR_4g116040 | 41.547 | 349 | 182 | 5 | 167 | 513 | 15 | 343 | 1.18e-83 | 263 |
| MS.gene50879.t1 | MTR_4g109260 | 58.974 | 78 | 32 | 0 | 227 | 304 | 59 | 136 | 3.79e-28 | 109 |
| MS.gene50879.t1 | MTR_8g091920 | 31.065 | 338 | 136 | 11 | 172 | 488 | 2 | 263 | 4.48e-27 | 110 |
| MS.gene50879.t1 | MTR_8g091915 | 46.296 | 54 | 28 | 1 | 218 | 271 | 9 | 61 | 3.23e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50879.t1 | AT5G61250 | 57.778 | 540 | 200 | 3 | 1 | 513 | 1 | 539 | 0.0 | 652 |
| MS.gene50879.t1 | AT5G61250 | 57.778 | 540 | 200 | 3 | 1 | 513 | 1 | 539 | 0.0 | 652 |
| MS.gene50879.t1 | AT5G61250 | 57.778 | 540 | 200 | 3 | 1 | 513 | 1 | 539 | 0.0 | 652 |
| MS.gene50879.t1 | AT5G07830 | 56.985 | 544 | 202 | 4 | 1 | 513 | 1 | 543 | 0.0 | 646 |
| MS.gene50879.t1 | AT5G34940 | 47.290 | 535 | 257 | 6 | 2 | 513 | 4 | 536 | 1.73e-171 | 495 |
| MS.gene50879.t1 | AT5G34940 | 51.187 | 379 | 180 | 3 | 2 | 376 | 4 | 381 | 1.46e-130 | 385 |
| MS.gene50879.t1 | AT5G34940 | 48.139 | 403 | 188 | 4 | 130 | 513 | 1 | 401 | 1.65e-129 | 383 |
| MS.gene50879.t1 | AT5G34940 | 45.333 | 300 | 143 | 4 | 233 | 513 | 2 | 299 | 9.93e-87 | 269 |
Find 122 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATACTCTTCCCTGAATT+TGG | 0.165905 | 3.1:-14232565 | None:intergenic |
| TTCAGGGCCATTGTGATATT+TGG | 0.181342 | 3.1:+14229737 | MS.gene50879:intron |
| ACGCATCTAGAATTCGTTTA+AGG | 0.190782 | 3.1:-14230349 | None:intergenic |
| ACACTCATCTATTGTAAATT+TGG | 0.204139 | 3.1:+14228691 | MS.gene50879:CDS |
| TATTGTAGGCAGACATTAAT+TGG | 0.223121 | 3.1:+14230994 | MS.gene50879:CDS |
| ACGAAGCTTCTTCAGATTTC+TGG | 0.223255 | 3.1:+14230440 | MS.gene50879:CDS |
| CTTCTGAAGTTATTATCTTT+TGG | 0.223696 | 3.1:-14232594 | None:intergenic |
| GACAAAGGATTTATGTATAT+TGG | 0.258505 | 3.1:-14232708 | None:intergenic |
| CATTTGCTTTAACAGTTATA+TGG | 0.259495 | 3.1:-14232536 | None:intergenic |
| CAAATGAAGTGGCCAAATTC+AGG | 0.267956 | 3.1:+14232553 | MS.gene50879:CDS |
| ACGCCCATTGTTCAAAAGAT+AGG | 0.290529 | 3.1:+14231287 | MS.gene50879:CDS |
| CATGGTTTGCTACAAGTAAA+TGG | 0.301466 | 3.1:+14228572 | MS.gene50879:CDS |
| ACACATTTGTGAATAGCTTT+TGG | 0.310585 | 3.1:+14230810 | MS.gene50879:CDS |
| ACAATAAACTTTAGTATTGT+AGG | 0.313930 | 3.1:-14230977 | None:intergenic |
| CAAGCTGGAGCGTCAAAGTT+TGG | 0.318292 | 3.1:-14232750 | None:intergenic |
| ACCAGACTAGTAATAATGTT+TGG | 0.327295 | 3.1:+14229783 | MS.gene50879:CDS |
| ATACAGACCTTGGATTGATT+TGG | 0.332956 | 3.1:-14228956 | None:intergenic |
| TGCCATTCAGCAACATGATA+TGG | 0.346582 | 3.1:-14232617 | None:intergenic |
| ACAATACTAAAGTTTATTGT+AGG | 0.351194 | 3.1:+14230980 | MS.gene50879:CDS |
| CTTCTTCAGATTTCTGGTTC+AGG | 0.352354 | 3.1:+14230446 | MS.gene50879:CDS |
| ATAAAATCATAAGCATTTGT+AGG | 0.374953 | 3.1:-14229821 | None:intergenic |
| ACATTAATTGGAGGGAACTA+TGG | 0.381290 | 3.1:+14231006 | MS.gene50879:CDS |
| AAGATTGATGCATGGGAATT+CGG | 0.384866 | 3.1:+14229869 | MS.gene50879:CDS |
| TGATAGCCCTCAAACCTTTG+AGG | 0.392187 | 3.1:+14229291 | MS.gene50879:intron |
| CCCAAACATTATTACTAGTC+TGG | 0.392254 | 3.1:-14229784 | None:intergenic |
| CCAGACTAGTAATAATGTTT+GGG | 0.424845 | 3.1:+14229784 | MS.gene50879:CDS |
| AAGCTGGAGCGTCAAAGTTT+GGG | 0.433562 | 3.1:-14232749 | None:intergenic |
| CTGATGGGAAAGAAGGTTCT+TGG | 0.434566 | 3.1:+14231226 | MS.gene50879:CDS |
| GTCTTATCCTCAAAGGTTTG+AGG | 0.436766 | 3.1:-14229298 | None:intergenic |
| TATAAAGTACACTGTTTCAA+AGG | 0.437179 | 3.1:+14229841 | MS.gene50879:CDS |
| GCAACGACGGCTATTGTTCA+TGG | 0.438811 | 3.1:+14228666 | MS.gene50879:CDS |
| TACTAGTCTGGTGCTTCCCA+TGG | 0.439185 | 3.1:-14229772 | None:intergenic |
| TCCACTTTGATCATGCGATT+AGG | 0.442888 | 3.1:-14230677 | None:intergenic |
| CATGGGTAGGAGAAGCTGGC+GGG | 0.443117 | 3.1:+14230756 | MS.gene50879:CDS |
| CGCCCATTGTTCAAAAGATA+GGG | 0.448279 | 3.1:+14231288 | MS.gene50879:CDS |
| ATAATGTTTGGGAAGGAGCC+TGG | 0.451503 | 3.1:+14229795 | MS.gene50879:CDS |
| TATACGTGCCTGTAGTAGTC+AGG | 0.455296 | 3.1:-14231060 | None:intergenic |
| TCATTTGTGCCACTATTGAT+TGG | 0.462951 | 3.1:+14228627 | MS.gene50879:CDS |
| ACTATTGTGGCATCGGCTGA+TGG | 0.464644 | 3.1:+14231210 | MS.gene50879:CDS |
| TTGTGCACTGGATCTGTTGT+TGG | 0.466323 | 3.1:-14232672 | None:intergenic |
| TCTTATCCTCAAAGGTTTGA+GGG | 0.467877 | 3.1:-14229297 | None:intergenic |
| AACTCATCATATATACAACT+TGG | 0.470118 | 3.1:+14230484 | MS.gene50879:CDS |
| CGTAGGTACTTAGATCAACT+TGG | 0.475247 | 3.1:+14230943 | MS.gene50879:intron |
| TAAAATCATAAGCATTTGTA+GGG | 0.476533 | 3.1:-14229820 | None:intergenic |
| GTAGGAAAATTGAAGTCTAC+TGG | 0.478508 | 3.1:+14229356 | MS.gene50879:CDS |
| TTTCAGTGTCTGGCACAAGC+TGG | 0.484683 | 3.1:-14232765 | None:intergenic |
| TCTGCATGGGTAGGAGAAGC+TGG | 0.485954 | 3.1:+14230752 | MS.gene50879:CDS |
| ATAAAGTACACTGTTTCAAA+GGG | 0.487781 | 3.1:+14229842 | MS.gene50879:CDS |
| CATATATACAACTTGGGCCC+AGG | 0.490634 | 3.1:+14230491 | MS.gene50879:CDS |
| AAATGAAGTGGCCAAATTCA+GGG | 0.493386 | 3.1:+14232554 | MS.gene50879:CDS |
| TGCCTGTAGTAGTCAGGATT+AGG | 0.496914 | 3.1:-14231054 | None:intergenic |
| GCAGCTAACAGTGGTGGTAT+TGG | 0.502287 | 3.1:+14230779 | MS.gene50879:CDS |
| CTCCTAATCCTGACTACTAC+AGG | 0.506485 | 3.1:+14231052 | MS.gene50879:CDS |
| CGGTCCTTGGGCTTCTGCAT+GGG | 0.507100 | 3.1:+14230739 | MS.gene50879:CDS |
| CTATTGTGGCATCGGCTGAT+GGG | 0.511834 | 3.1:+14231211 | MS.gene50879:CDS |
| TTTATCACGTCTTTCGCATA+CGG | 0.511957 | 3.1:-14230326 | None:intergenic |
| GACCTTGGATTGATTTGGCA+AGG | 0.512656 | 3.1:-14228951 | None:intergenic |
| ACGGTCCTTGGGCTTCTGCA+TGG | 0.512670 | 3.1:+14230738 | MS.gene50879:CDS |
| TTTGGCTTGAATGCGCTCCA+TGG | 0.517585 | 3.1:+14229755 | MS.gene50879:CDS |
| TTCCTTATCATAAAATCCAC+CGG | 0.519683 | 3.1:-14230411 | None:intergenic |
| GGGATACAAGATTGATGCAT+GGG | 0.521559 | 3.1:+14229862 | MS.gene50879:CDS |
| CTGCAAACAGCGCACTATTG+TGG | 0.522677 | 3.1:+14231197 | MS.gene50879:intron |
| CAACGACGGCTATTGTTCAT+GGG | 0.524239 | 3.1:+14228667 | MS.gene50879:CDS |
| TTTGTGCCACTATTGATTGG+TGG | 0.527355 | 3.1:+14228630 | MS.gene50879:CDS |
| GTCAGGATTAGGAGCGAGAG+TGG | 0.529327 | 3.1:-14231043 | None:intergenic |
| TTGGCTTGAATGCGCTCCAT+GGG | 0.529687 | 3.1:+14229756 | MS.gene50879:CDS |
| CCGTCGTTGCATTTATCTTG+AGG | 0.531848 | 3.1:-14228653 | None:intergenic |
| TAATGTTTGGGAAGGAGCCT+GGG | 0.535436 | 3.1:+14229796 | MS.gene50879:CDS |
| TTGATTTGGCAAGGAGAGGA+CGG | 0.536857 | 3.1:-14228942 | None:intergenic |
| ATAAGCATTTGTAGGGTCCC+AGG | 0.537484 | 3.1:-14229813 | None:intergenic |
| AGCCATATCATGTTGCTGAA+TGG | 0.538295 | 3.1:+14232615 | MS.gene50879:CDS |
| TGATTTGGCAAGGAGAGGAC+GGG | 0.539887 | 3.1:-14228941 | None:intergenic |
| ACAGCGCACTATTGTGGCAT+CGG | 0.543852 | 3.1:+14231203 | MS.gene50879:intron |
| TTGAGGCCACCAATCAATAG+TGG | 0.544994 | 3.1:-14228636 | None:intergenic |
| TGGAGGCTCTCTGCAAGACC+AGG | 0.545315 | 3.1:+14229322 | MS.gene50879:CDS |
| GGTAATGAGTTAAGCGGTGA+AGG | 0.547883 | 3.1:+14230278 | MS.gene50879:intron |
| GCATCGGCTGATGGGAAAGA+AGG | 0.553242 | 3.1:+14231219 | MS.gene50879:CDS |
| GATCTCACATTATTGTGCAC+TGG | 0.553447 | 3.1:-14232684 | None:intergenic |
| CGAGAGTGGAGGAATTGAGA+AGG | 0.556404 | 3.1:-14231029 | None:intergenic |
| CCTTTGAGGATAAGACTTGG+AGG | 0.558911 | 3.1:+14229305 | MS.gene50879:CDS |
| GCATGGGTAGGAGAAGCTGG+CGG | 0.561478 | 3.1:+14230755 | MS.gene50879:CDS |
| TTCCTACGTTATACACCACC+TGG | 0.561570 | 3.1:-14229340 | None:intergenic |
| GAAGGCGTTGGTGCATCAGT+CGG | 0.563564 | 3.1:+14230296 | MS.gene50879:CDS |
| GAGTTAAGCGGTGAAGGCGT+TGG | 0.566975 | 3.1:+14230284 | MS.gene50879:CDS |
| ATCTTTACACATGCAAAGGT+GGG | 0.567167 | 3.1:+14229427 | MS.gene50879:CDS |
| CCTCCAAGTCTTATCCTCAA+AGG | 0.568811 | 3.1:-14229305 | None:intergenic |
| CTCCTTGCCAAATCAATCCA+AGG | 0.569444 | 3.1:+14228949 | MS.gene50879:CDS |
| TGGATTGATTTGGCAAGGAG+AGG | 0.569512 | 3.1:-14228946 | None:intergenic |
| AACTGTTAAAGCAAATGAAG+TGG | 0.573879 | 3.1:+14232542 | MS.gene50879:CDS |
| ACCTAATCGCATGATCAAAG+TGG | 0.578144 | 3.1:+14230676 | MS.gene50879:CDS |
| CTAAGTAAAGATATTGAACA+TGG | 0.579049 | 3.1:+14228554 | MS.gene50879:CDS |
| CCTTGGGCTTCTGCATGGGT+AGG | 0.579890 | 3.1:+14230743 | MS.gene50879:CDS |
| GATCTTTACACATGCAAAGG+TGG | 0.583363 | 3.1:+14229426 | MS.gene50879:CDS |
| TGTAGGCAGACATTAATTGG+AGG | 0.589759 | 3.1:+14230997 | MS.gene50879:CDS |
| ACAATAAATGCAATGGACAA+AGG | 0.591432 | 3.1:-14232723 | None:intergenic |
| CCACCGGGTGCTACAAGTGA+GGG | 0.593126 | 3.1:-14230395 | None:intergenic |
| ATGGGTAGGAGAAGCTGGCG+GGG | 0.596035 | 3.1:+14230757 | MS.gene50879:CDS |
| AAACCTTTGAGGATAAGACT+TGG | 0.596572 | 3.1:+14229302 | MS.gene50879:CDS |
| GTAGGCAGACATTAATTGGA+GGG | 0.597652 | 3.1:+14230998 | MS.gene50879:CDS |
| AGGGATACAAGATTGATGCA+TGG | 0.601095 | 3.1:+14229861 | MS.gene50879:CDS |
| GGCGGGGCAGCTAACAGTGG+TGG | 0.601222 | 3.1:+14230773 | MS.gene50879:CDS |
| ACTAGTAATAATGTTTGGGA+AGG | 0.601646 | 3.1:+14229788 | MS.gene50879:CDS |
| ACTCATCATATATACAACTT+GGG | 0.603814 | 3.1:+14230485 | MS.gene50879:CDS |
| AGGCTCTCTGCAAGACCAGG+TGG | 0.605446 | 3.1:+14229325 | MS.gene50879:CDS |
| AGGGATCTTTACACATGCAA+AGG | 0.605651 | 3.1:+14229423 | MS.gene50879:CDS |
| TGGGTACACAATAAATGCAA+TGG | 0.613033 | 3.1:-14232730 | None:intergenic |
| ACTTAGAGTAACTTGAAGAG+AGG | 0.619053 | 3.1:-14228537 | None:intergenic |
| ATAAACTTTAGTATTGTAGG+TGG | 0.622737 | 3.1:-14230974 | None:intergenic |
| TCCACCGGGTGCTACAAGTG+AGG | 0.628017 | 3.1:-14230396 | None:intergenic |
| CCTACCCATGCAGAAGCCCA+AGG | 0.632180 | 3.1:-14230743 | None:intergenic |
| AGGATTAGGAGCGAGAGTGG+AGG | 0.634675 | 3.1:-14231040 | None:intergenic |
| CCCTCACTTGTAGCACCCGG+TGG | 0.641616 | 3.1:+14230395 | MS.gene50879:CDS |
| AAACCCTCACTTGTAGCACC+CGG | 0.649894 | 3.1:+14230392 | MS.gene50879:CDS |
| TATGTAGGTAATGAGTTAAG+CGG | 0.653581 | 3.1:+14230272 | MS.gene50879:intron |
| ATGCGTTATACAAGAACTCG+AGG | 0.655501 | 3.1:+14230366 | MS.gene50879:CDS |
| AACGACGGCTATTGTTCATG+GGG | 0.656605 | 3.1:+14228668 | MS.gene50879:CDS |
| TCCTTATCATAAAATCCACC+GGG | 0.660783 | 3.1:-14230410 | None:intergenic |
| GCTGGCGGGGCAGCTAACAG+TGG | 0.661575 | 3.1:+14230770 | MS.gene50879:CDS |
| CCTCAAGATAAATGCAACGA+CGG | 0.672331 | 3.1:+14228653 | MS.gene50879:CDS |
| AAAAGATAAACAATGCAAGG+TGG | 0.672812 | 3.1:-14228511 | None:intergenic |
| ATTCAAGCCAAATATCACAA+TGG | 0.676549 | 3.1:-14229744 | None:intergenic |
| GACCAGGTGGTGTATAACGT+AGG | 0.736735 | 3.1:+14229338 | MS.gene50879:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CACGTATAAATTAAATATTA+CGG | + | chr3.1:14231075-14231094 | MS.gene50879:intron | 15.0% |
| !! | GATGATAATAACAAATATAA+TGG | - | chr3.1:14229496-14229515 | None:intergenic | 15.0% |
| !! | TCTTTAATTATAAGGAATAA+AGG | - | chr3.1:14229578-14229597 | None:intergenic | 15.0% |
| !!! | ATAATAACAAATATAATGGA+AGG | - | chr3.1:14229492-14229511 | None:intergenic | 15.0% |
| !!! | TTCTTTTAAACCAAATAAAA+AGG | + | chr3.1:14229536-14229555 | MS.gene50879:intron | 15.0% |
| !! | AAAAATACAGCAATCAATAA+CGG | - | chr3.1:14231639-14231658 | None:intergenic | 20.0% |
| !! | ACAATAAACTTTAGTATTGT+AGG | - | chr3.1:14230980-14230999 | None:intergenic | 20.0% |
| !! | ACAATACTAAAGTTTATTGT+AGG | + | chr3.1:14230980-14230999 | MS.gene50879:CDS | 20.0% |
| !! | ACTAAACAGTTATATTTAGT+TGG | - | chr3.1:14231877-14231896 | None:intergenic | 20.0% |
| !! | ACTTAGAAATAGATTATGAA+TGG | - | chr3.1:14230605-14230624 | None:intergenic | 20.0% |
| !! | ATAAAATCATAAGCATTTGT+AGG | - | chr3.1:14229824-14229843 | None:intergenic | 20.0% |
| !! | TAAAAAAGATAAACAATGCA+AGG | - | chr3.1:14228517-14228536 | None:intergenic | 20.0% |
| !! | TAAAATCATAAGCATTTGTA+GGG | - | chr3.1:14229823-14229842 | None:intergenic | 20.0% |
| !! | TCCTTATAATTAAAGACTTT+AGG | + | chr3.1:14229582-14229601 | MS.gene50879:intron | 20.0% |
| !! | TGTTTAGTTAGTTATGTTTA+AGG | + | chr3.1:14231889-14231908 | MS.gene50879:intron | 20.0% |
| !!! | AATCATTTTTTCAATAAGAC+AGG | + | chr3.1:14229458-14229477 | MS.gene50879:CDS | 20.0% |
| !!! | ATCATTTTTTCAATAAGACA+GGG | + | chr3.1:14229459-14229478 | MS.gene50879:CDS | 20.0% |
| !!! | ATTGTTGTTTTTTATTACTG+TGG | + | chr3.1:14229214-14229233 | MS.gene50879:intron | 20.0% |
| !!! | CCATTCGATTTTTAAAATAT+CGG | - | chr3.1:14229045-14229064 | None:intergenic | 20.0% |
| !!! | GTTTTTAAAACATTGTTGAT+GGG | + | chr3.1:14229185-14229204 | MS.gene50879:intron | 20.0% |
| !!! | TAAGTTAATTTCTCTTTTTC+AGG | + | chr3.1:14230620-14230639 | MS.gene50879:intron | 20.0% |
| !!! | TGTTTTTAAAACATTGTTGA+TGG | + | chr3.1:14229184-14229203 | MS.gene50879:intron | 20.0% |
| !!! | TTGAAACTATCCTTTTTATT+TGG | - | chr3.1:14229549-14229568 | None:intergenic | 20.0% |
| ! | AAAAATCAGAATTCTTCTTC+TGG | - | chr3.1:14230883-14230902 | None:intergenic | 25.0% |
| ! | AACTCATCATATATACAACT+TGG | + | chr3.1:14230484-14230503 | MS.gene50879:CDS | 25.0% |
| ! | AATATAATATCCTTCCTAAG+AGG | - | chr3.1:14231336-14231355 | None:intergenic | 25.0% |
| ! | AATTGAACAATCACTAAAAC+TGG | - | chr3.1:14228893-14228912 | None:intergenic | 25.0% |
| ! | ACACTCATCTATTGTAAATT+TGG | + | chr3.1:14228691-14228710 | MS.gene50879:CDS | 25.0% |
| ! | ACCACTAATGTAAAAAACTT+AGG | + | chr3.1:14228798-14228817 | MS.gene50879:intron | 25.0% |
| ! | ACCTTAATTAGTGTAACAAT+GGG | + | chr3.1:14231517-14231536 | MS.gene50879:intron | 25.0% |
| ! | ACTCAAGTTAACAAAAAAAG+GGG | + | chr3.1:14232644-14232663 | MS.gene50879:CDS | 25.0% |
| ! | ACTCATCATATATACAACTT+GGG | + | chr3.1:14230485-14230504 | MS.gene50879:CDS | 25.0% |
| ! | AGGTTGAAAAAAGATAAACA+TGG | - | chr3.1:14231713-14231732 | None:intergenic | 25.0% |
| ! | ATAAACTTTAGTATTGTAGG+TGG | - | chr3.1:14230977-14230996 | None:intergenic | 25.0% |
| ! | ATAAAGTACACTGTTTCAAA+GGG | + | chr3.1:14229842-14229861 | MS.gene50879:CDS | 25.0% |
| ! | ATACGAGTCATTCAAATATT+CGG | - | chr3.1:14230923-14230942 | None:intergenic | 25.0% |
| ! | ATGAAATTGGTAAGAAATTC+AGG | - | chr3.1:14232444-14232463 | None:intergenic | 25.0% |
| ! | CACTCAAGTTAACAAAAAAA+GGG | + | chr3.1:14232643-14232662 | MS.gene50879:CDS | 25.0% |
| ! | CATTTGCTTTAACAGTTATA+TGG | - | chr3.1:14232539-14232558 | None:intergenic | 25.0% |
| ! | CCATTTCAAAAGATGAAAAA+TGG | + | chr3.1:14229383-14229402 | MS.gene50879:CDS | 25.0% |
| ! | CTAAGTAAAGATATTGAACA+TGG | + | chr3.1:14228554-14228573 | MS.gene50879:CDS | 25.0% |
| ! | CTTAGAAAGAGGAAAATAAA+AGG | - | chr3.1:14230851-14230870 | None:intergenic | 25.0% |
| ! | GAAATAGATTATGAATGGTA+TGG | - | chr3.1:14230600-14230619 | None:intergenic | 25.0% |
| ! | GACAAAGGATTTATGTATAT+TGG | - | chr3.1:14232711-14232730 | None:intergenic | 25.0% |
| ! | GCCTAAAGTCTTTAATTATA+AGG | - | chr3.1:14229586-14229605 | None:intergenic | 25.0% |
| ! | TACCTTAATTAGTGTAACAA+TGG | + | chr3.1:14231516-14231535 | MS.gene50879:intron | 25.0% |
| ! | TAGCAAAAGTCAAAAGATAT+CGG | - | chr3.1:14232407-14232426 | None:intergenic | 25.0% |
| ! | TATAAAGTACACTGTTTCAA+AGG | + | chr3.1:14229841-14229860 | MS.gene50879:CDS | 25.0% |
| ! | TCAGAAACCATTAAAAAACA+CGG | + | chr3.1:14230719-14230738 | MS.gene50879:CDS | 25.0% |
| ! | TGATGTAAATATGGTAACTA+TGG | + | chr3.1:14231462-14231481 | MS.gene50879:intron | 25.0% |
| ! | TGCTAGAAATGATGTAAATA+TGG | + | chr3.1:14231453-14231472 | MS.gene50879:intron | 25.0% |
| ! | TGTTTGAAAATATTGAATCC+TGG | + | chr3.1:14232326-14232345 | MS.gene50879:intron | 25.0% |
| ! | TTATCAGATAACAGTTATAG+CGG | - | chr3.1:14230100-14230119 | None:intergenic | 25.0% |
| ! | TTCGACTTCTATAAATAGTT+GGG | - | chr3.1:14231814-14231833 | None:intergenic | 25.0% |
| ! | TTTACACGAAATATTAATGC+AGG | - | chr3.1:14229631-14229650 | None:intergenic | 25.0% |
| !! | CTTGAAATTTTATGTTTCCT+TGG | + | chr3.1:14228856-14228875 | MS.gene50879:intron | 25.0% |
| !! | CTTGTTGTATATACTTATGT+AGG | + | chr3.1:14230257-14230276 | MS.gene50879:intron | 25.0% |
| !! | CTTTATTTGAGGATTTATAG+TGG | + | chr3.1:14231130-14231149 | MS.gene50879:intron | 25.0% |
| !! | TAGTTATGTTTAAGGTAACT+AGG | + | chr3.1:14231897-14231916 | MS.gene50879:intron | 25.0% |
| !! | TTTTCCTCTTTCTAAGTTTT+AGG | + | chr3.1:14230855-14230874 | MS.gene50879:intron | 25.0% |
| !!! | AACTTGATATGCTTTATTTG+AGG | + | chr3.1:14231119-14231138 | MS.gene50879:intron | 25.0% |
| !!! | AAGATGAAAAATGGATTGTT+TGG | + | chr3.1:14229392-14229411 | MS.gene50879:CDS | 25.0% |
| !!! | CAATGTTTTAAAAACAAGAC+CGG | - | chr3.1:14229180-14229199 | None:intergenic | 25.0% |
| !!! | CCATTTTTCATCTTTTGAAA+TGG | - | chr3.1:14229386-14229405 | None:intergenic | 25.0% |
| !!! | CCGATATTTTAAAAATCGAA+TGG | + | chr3.1:14229042-14229061 | MS.gene50879:intron | 25.0% |
| !!! | CTTCTGAAGTTATTATCTTT+TGG | - | chr3.1:14232597-14232616 | None:intergenic | 25.0% |
| !!! | GATTTTTAAAATATCGGTCA+TGG | - | chr3.1:14229039-14229058 | None:intergenic | 25.0% |
| !!! | TCCTAAGTTTTTTACATTAG+TGG | - | chr3.1:14228802-14228821 | None:intergenic | 25.0% |
| AAAAGATAAACAATGCAAGG+TGG | - | chr3.1:14228514-14228533 | None:intergenic | 30.0% | |
| AACTGTTAAAGCAAATGAAG+TGG | + | chr3.1:14232542-14232561 | MS.gene50879:CDS | 30.0% | |
| AAGATAAACATGGCTGTTAA+TGG | - | chr3.1:14231703-14231722 | None:intergenic | 30.0% | |
| AATTGAAGTTTGCACTTTCA+GGG | + | chr3.1:14229721-14229740 | MS.gene50879:intron | 30.0% | |
| ACAATAAATGCAATGGACAA+AGG | - | chr3.1:14232726-14232745 | None:intergenic | 30.0% | |
| ACATATCTAATCCTAGATTC+TGG | + | chr3.1:14231172-14231191 | MS.gene50879:intron | 30.0% | |
| ACCAGACTAGTAATAATGTT+TGG | + | chr3.1:14229783-14229802 | MS.gene50879:CDS | 30.0% | |
| ACTAGTAATAATGTTTGGGA+AGG | + | chr3.1:14229788-14229807 | MS.gene50879:CDS | 30.0% | |
| AGAATTGTCTGAATTCTAAC+AGG | - | chr3.1:14231733-14231752 | None:intergenic | 30.0% | |
| AGTATTCGAGTATTCTTACT+CGG | - | chr3.1:14231983-14232002 | None:intergenic | 30.0% | |
| AGTGATTGTTCAATTGAATG+TGG | + | chr3.1:14228898-14228917 | MS.gene50879:intron | 30.0% | |
| ATGTACCAAAACAAAGAACT+TGG | + | chr3.1:14229652-14229671 | MS.gene50879:intron | 30.0% | |
| ATTCAAGCCAAATATCACAA+TGG | - | chr3.1:14229747-14229766 | None:intergenic | 30.0% | |
| CCACTCAAGTTAACAAAAAA+AGG | + | chr3.1:14232642-14232661 | MS.gene50879:CDS | 30.0% | |
| CCAGACTAGTAATAATGTTT+GGG | + | chr3.1:14229784-14229803 | MS.gene50879:CDS | 30.0% | |
| CTAATTTACTACAACCTCTT+AGG | + | chr3.1:14231319-14231338 | MS.gene50879:intron | 30.0% | |
| CTAGGAATAATAGATAGATC+AGG | + | chr3.1:14231915-14231934 | MS.gene50879:intron | 30.0% | |
| CTTCGACTTCTATAAATAGT+TGG | - | chr3.1:14231815-14231834 | None:intergenic | 30.0% | |
| GAAAGAGGAAAATAAAAGGA+TGG | - | chr3.1:14230847-14230866 | None:intergenic | 30.0% | |
| GAATAAAAACTGAACTCATC+AGG | - | chr3.1:14231378-14231397 | None:intergenic | 30.0% | |
| TAAAATTTCCGCAACTATAG+CGG | + | chr3.1:14232212-14232231 | MS.gene50879:intron | 30.0% | |
| TAATGTAGAAATACAGACCT+TGG | - | chr3.1:14228969-14228988 | None:intergenic | 30.0% | |
| TAATTGAAGTTTGCACTTTC+AGG | + | chr3.1:14229720-14229739 | MS.gene50879:intron | 30.0% | |
| TAGTTCATATATCCTAACCA+AGG | - | chr3.1:14232101-14232120 | None:intergenic | 30.0% | |
| TATATACAACAAGTCCACAT+CGG | - | chr3.1:14230250-14230269 | None:intergenic | 30.0% | |
| TATGTAGGTAATGAGTTAAG+CGG | + | chr3.1:14230272-14230291 | MS.gene50879:intron | 30.0% | |
| TATTGTAGGCAGACATTAAT+TGG | + | chr3.1:14230994-14231013 | MS.gene50879:CDS | 30.0% | |
| TCAAACATTCAATATCAACC+TGG | - | chr3.1:14232313-14232332 | None:intergenic | 30.0% | |
| TCCATATGTTCTATGAAACA+CGG | + | chr3.1:14228730-14228749 | MS.gene50879:intron | 30.0% | |
| TCCCATTGTTACACTAATTA+AGG | - | chr3.1:14231521-14231540 | None:intergenic | 30.0% | |
| TCTTACCAATTTCATTCAAC+AGG | + | chr3.1:14232449-14232468 | MS.gene50879:intron | 30.0% | |
| TGGTTTAATCGATTAAACCA+CGG | - | chr3.1:14229148-14229129 | None:intergenic | 30.0% | |
| TTCCTTATCATAAAATCCAC+CGG | - | chr3.1:14230414-14230433 | None:intergenic | 30.0% | |
| TTTAGCATTTATCTGTCTTC+TGG | + | chr3.1:14229098-14229117 | MS.gene50879:intron | 30.0% | |
| ! | ACACATTTGTGAATAGCTTT+TGG | + | chr3.1:14230810-14230829 | MS.gene50879:CDS | 30.0% |
| ! | CAACATTGTTCTAAACCAAT+TGG | + | chr3.1:14230191-14230210 | MS.gene50879:intron | 30.0% |
| ! | GGATTGTTTGGATTTTCAAA+GGG | + | chr3.1:14229404-14229423 | MS.gene50879:CDS | 30.0% |
| ! | GTAACTATGGATTGATTCTT+TGG | + | chr3.1:14231475-14231494 | MS.gene50879:intron | 30.0% |
| ! | GTGGATTTTATGATAAGGAA+TGG | + | chr3.1:14230414-14230433 | MS.gene50879:CDS | 30.0% |
| ! | TACCCTATCTTTTGAACAAT+GGG | - | chr3.1:14231293-14231312 | None:intergenic | 30.0% |
| ! | TGGATTGTTTGGATTTTCAA+AGG | + | chr3.1:14229403-14229422 | MS.gene50879:CDS | 30.0% |
| ! | TTACCCTATCTTTTGAACAA+TGG | - | chr3.1:14231294-14231313 | None:intergenic | 30.0% |
| !! | ATGATCCATCATCTTTTTCA+TGG | - | chr3.1:14232029-14232048 | None:intergenic | 30.0% |
| !! | ATTGACTTCATTTTCTATGG+CGG | - | chr3.1:14228833-14228852 | None:intergenic | 30.0% |
| !! | TGAATGTGGATTGATTTTTC+AGG | + | chr3.1:14228912-14228931 | MS.gene50879:intron | 30.0% |
| !!! | AGCATTGACTTCATTTTCTA+TGG | - | chr3.1:14228836-14228855 | None:intergenic | 30.0% |
| !!! | CCTTTTTTTGTTAACTTGAG+TGG | - | chr3.1:14232645-14232664 | None:intergenic | 30.0% |
| AAATGAAGTGGCCAAATTCA+GGG | + | chr3.1:14232554-14232573 | MS.gene50879:CDS | 35.0% | |
| AACAACAGGAAAGACTAAAG+CGG | - | chr3.1:14230225-14230244 | None:intergenic | 35.0% | |
| AACTGAATAAACTCATCTCC+AGG | + | chr3.1:14232292-14232311 | MS.gene50879:intron | 35.0% | |
| AAGATTGATGCATGGGAATT+CGG | + | chr3.1:14229869-14229888 | MS.gene50879:CDS | 35.0% | |
| AATAATCCACGAATACCTAG+TGG | + | chr3.1:14231611-14231630 | MS.gene50879:intron | 35.0% | |
| ACATTAATTGGAGGGAACTA+TGG | + | chr3.1:14231006-14231025 | MS.gene50879:CDS | 35.0% | |
| ACTTAGAGTAACTTGAAGAG+AGG | - | chr3.1:14228540-14228559 | None:intergenic | 35.0% | |
| ATAAACATGGCTGTTAATGG+AGG | - | chr3.1:14231700-14231719 | None:intergenic | 35.0% | |
| ATACAGACCTTGGATTGATT+TGG | - | chr3.1:14228959-14228978 | None:intergenic | 35.0% | |
| ATATACAACAAGTCCACATC+GGG | - | chr3.1:14230249-14230268 | None:intergenic | 35.0% | |
| ATCTTTACACATGCAAAGGT+GGG | + | chr3.1:14229427-14229446 | MS.gene50879:CDS | 35.0% | |
| ATGATACTCTTCCCTGAATT+TGG | - | chr3.1:14232568-14232587 | None:intergenic | 35.0% | |
| ATTTGAATGACTCGTATCGT+AGG | + | chr3.1:14230926-14230945 | MS.gene50879:intron | 35.0% | |
| CATTAAAAAACACGGTCCTT+GGG | + | chr3.1:14230727-14230746 | MS.gene50879:CDS | 35.0% | |
| CCCAAACATTATTACTAGTC+TGG | - | chr3.1:14229787-14229806 | None:intergenic | 35.0% | |
| GGGGAAAACTACAATTAATG+CGG | + | chr3.1:14232238-14232257 | MS.gene50879:intron | 35.0% | |
| GTAGGAAAATTGAAGTCTAC+TGG | + | chr3.1:14229356-14229375 | MS.gene50879:CDS | 35.0% | |
| GTATTCGAGTATTCTTACTC+GGG | - | chr3.1:14231982-14232001 | None:intergenic | 35.0% | |
| TATTAAACCAATCAGCGAAC+TGG | - | chr3.1:14229074-14229093 | None:intergenic | 35.0% | |
| TCCGTGTTTCATAGAACATA+TGG | - | chr3.1:14228734-14228753 | None:intergenic | 35.0% | |
| TCCTTATCATAAAATCCACC+GGG | - | chr3.1:14230413-14230432 | None:intergenic | 35.0% | |
| TCGAAGATAATTGCAGTTGT+TGG | + | chr3.1:14231829-14231848 | MS.gene50879:intron | 35.0% | |
| TCTTATCCTCAAAGGTTTGA+GGG | - | chr3.1:14229300-14229319 | None:intergenic | 35.0% | |
| TGGGTACACAATAAATGCAA+TGG | - | chr3.1:14232733-14232752 | None:intergenic | 35.0% | |
| TTTACTACAACCTCTTAGGA+AGG | + | chr3.1:14231323-14231342 | MS.gene50879:intron | 35.0% | |
| TTTATCACGTCTTTCGCATA+CGG | - | chr3.1:14230329-14230348 | None:intergenic | 35.0% | |
| TTTGAGGATTTATAGTGGTC+AGG | + | chr3.1:14231135-14231154 | MS.gene50879:intron | 35.0% | |
| ! | AAACCTTTGAGGATAAGACT+TGG | + | chr3.1:14229302-14229321 | MS.gene50879:CDS | 35.0% |
| ! | ACGCATCTAGAATTCGTTTA+AGG | - | chr3.1:14230352-14230371 | None:intergenic | 35.0% |
| ! | GATAACATTTTGCTAGCGTA+TGG | + | chr3.1:14230115-14230134 | MS.gene50879:intron | 35.0% |
| ! | GCTATAGTTGCGGAAATTTT+AGG | - | chr3.1:14232213-14232232 | None:intergenic | 35.0% |
| ! | TCATTTGTGCCACTATTGAT+TGG | + | chr3.1:14228627-14228646 | MS.gene50879:CDS | 35.0% |
| !! | AAAGCAGAAGCATGGTTTTA+GGG | - | chr3.1:14231662-14231681 | None:intergenic | 35.0% |
| !! | CATGGTTTGCTACAAGTAAA+TGG | + | chr3.1:14228572-14228591 | MS.gene50879:CDS | 35.0% |
| !! | GACATCCAAGTTCTTTGTTT+TGG | - | chr3.1:14229660-14229679 | None:intergenic | 35.0% |
| !!! | TGTTTTAGCATATGCCCAAT+TGG | + | chr3.1:14229939-14229958 | MS.gene50879:intron | 35.0% |
| AATACTCCCTTACAAGCTCA+AGG | + | chr3.1:14231997-14232016 | MS.gene50879:intron | 40.0% | |
| ACAATAGCACTGTTGCATAG+TGG | - | chr3.1:14230076-14230095 | None:intergenic | 40.0% | |
| ACCAATTTCATTCAACAGGC+TGG | + | chr3.1:14232453-14232472 | MS.gene50879:intron | 40.0% | |
| ACCAGCCTGTTGAATGAAAT+TGG | - | chr3.1:14232457-14232476 | None:intergenic | 40.0% | |
| ACCTAATCGCATGATCAAAG+TGG | + | chr3.1:14230676-14230695 | MS.gene50879:CDS | 40.0% | |
| ACGAAGCTTCTTCAGATTTC+TGG | + | chr3.1:14230440-14230459 | MS.gene50879:CDS | 40.0% | |
| ACGCCCATTGTTCAAAAGAT+AGG | + | chr3.1:14231287-14231306 | MS.gene50879:CDS | 40.0% | |
| AGAAGAGAAAGTGAGTGTAG+CGG | - | chr3.1:14229520-14229539 | None:intergenic | 40.0% | |
| AGAATGACACTGAATCAACC+AGG | - | chr3.1:14232347-14232366 | None:intergenic | 40.0% | |
| AGCCATATCATGTTGCTGAA+TGG | + | chr3.1:14232615-14232634 | MS.gene50879:CDS | 40.0% | |
| AGGGATACAAGATTGATGCA+TGG | + | chr3.1:14229861-14229880 | MS.gene50879:CDS | 40.0% | |
| AGGGATCTTTACACATGCAA+AGG | + | chr3.1:14229423-14229442 | MS.gene50879:CDS | 40.0% | |
| AGTCCATTAACACTGCCAAT+TGG | - | chr3.1:14229957-14229976 | None:intergenic | 40.0% | |
| ATGCGTTATACAAGAACTCG+AGG | + | chr3.1:14230366-14230385 | MS.gene50879:CDS | 40.0% | |
| CAAATGAAGTGGCCAAATTC+AGG | + | chr3.1:14232553-14232572 | MS.gene50879:CDS | 40.0% | |
| CATCATTCCCAACAGAATGA+AGG | + | chr3.1:14232162-14232181 | MS.gene50879:intron | 40.0% | |
| CCATTAAAAAACACGGTCCT+TGG | + | chr3.1:14230726-14230745 | MS.gene50879:CDS | 40.0% | |
| CCTCAAGATAAATGCAACGA+CGG | + | chr3.1:14228653-14228672 | MS.gene50879:CDS | 40.0% | |
| CGCCCATTGTTCAAAAGATA+GGG | + | chr3.1:14231288-14231307 | MS.gene50879:CDS | 40.0% | |
| CGTAGGTACTTAGATCAACT+TGG | + | chr3.1:14230943-14230962 | MS.gene50879:intron | 40.0% | |
| CTAAAACCATGCTTCTGCTT+TGG | + | chr3.1:14231661-14231680 | MS.gene50879:intron | 40.0% | |
| CTTCATTCTGTTGGGAATGA+TGG | - | chr3.1:14232164-14232183 | None:intergenic | 40.0% | |
| GAAACACGGATTCTAACACA+CGG | + | chr3.1:14228744-14228763 | MS.gene50879:intron | 40.0% | |
| GAATTACGATGACATGTGGT+AGG | + | chr3.1:14229691-14229710 | MS.gene50879:intron | 40.0% | |
| GATCTCACATTATTGTGCAC+TGG | - | chr3.1:14232687-14232706 | None:intergenic | 40.0% | |
| GATCTTTACACATGCAAAGG+TGG | + | chr3.1:14229426-14229445 | MS.gene50879:CDS | 40.0% | |
| GGCACCTAAAACTTAGAAAG+AGG | - | chr3.1:14230862-14230881 | None:intergenic | 40.0% | |
| GGGATACAAGATTGATGCAT+GGG | + | chr3.1:14229862-14229881 | MS.gene50879:CDS | 40.0% | |
| GGTAGAATTACGATGACATG+TGG | + | chr3.1:14229687-14229706 | MS.gene50879:intron | 40.0% | |
| GTAGGCAGACATTAATTGGA+GGG | + | chr3.1:14230998-14231017 | MS.gene50879:CDS | 40.0% | |
| GTCCATTAACACTGCCAATT+GGG | - | chr3.1:14229956-14229975 | None:intergenic | 40.0% | |
| GTCTTATCCTCAAAGGTTTG+AGG | - | chr3.1:14229301-14229320 | None:intergenic | 40.0% | |
| GTGTTGCAGACTAACAATGT+AGG | + | chr3.1:14232184-14232203 | MS.gene50879:intron | 40.0% | |
| GTTTCGTAGTTGAGACACAT+AGG | + | chr3.1:14231556-14231575 | MS.gene50879:intron | 40.0% | |
| TCAGAGGCTTCAAATCTAGT+GGG | + | chr3.1:14232067-14232086 | MS.gene50879:intron | 40.0% | |
| TCCACTTTGATCATGCGATT+AGG | - | chr3.1:14230680-14230699 | None:intergenic | 40.0% | |
| TCGATTAAACCATGACTCAG+AGG | + | chr3.1:14229137-14229156 | MS.gene50879:intron | 40.0% | |
| TCTCTCGGAAACAAGACATT+TGG | - | chr3.1:14231587-14231606 | None:intergenic | 40.0% | |
| TGCAACACCTTCATTCTGTT+GGG | - | chr3.1:14232172-14232191 | None:intergenic | 40.0% | |
| TGCCATTCAGCAACATGATA+TGG | - | chr3.1:14232620-14232639 | None:intergenic | 40.0% | |
| TGTAGGCAGACATTAATTGG+AGG | + | chr3.1:14230997-14231016 | MS.gene50879:CDS | 40.0% | |
| TGTTTGCAGAACCAGAATCT+AGG | - | chr3.1:14231186-14231205 | None:intergenic | 40.0% | |
| TTCAGGGCCATTGTGATATT+TGG | + | chr3.1:14229737-14229756 | MS.gene50879:intron | 40.0% | |
| ! | AACATTTTGCTAGCGTATGG+CGG | + | chr3.1:14230118-14230137 | MS.gene50879:intron | 40.0% |
| ! | AATGAACCGATTCAGATGCA+AGG | + | chr3.1:14231783-14231802 | MS.gene50879:intron | 40.0% |
| ! | ATGAACCGATTCAGATGCAA+GGG | + | chr3.1:14231784-14231803 | MS.gene50879:intron | 40.0% |
| ! | CGTGGATTATTGTTGTCTCT+CGG | - | chr3.1:14231602-14231621 | None:intergenic | 40.0% |
| ! | TTTGTGCCACTATTGATTGG+TGG | + | chr3.1:14228630-14228649 | MS.gene50879:CDS | 40.0% |
| !! | ACCCGGTGGATTTTATGATA+AGG | + | chr3.1:14230409-14230428 | MS.gene50879:CDS | 40.0% |
| !! | CAAAGCAGAAGCATGGTTTT+AGG | - | chr3.1:14231663-14231682 | None:intergenic | 40.0% |
| !! | CAATCAATAACGGATCCACT+AGG | - | chr3.1:14231629-14231648 | None:intergenic | 40.0% |
| !! | CATCATCTTTTTCATGGCTC+CGG | - | chr3.1:14232023-14232042 | None:intergenic | 40.0% |
| !! | CTTCTTCAGATTTCTGGTTC+AGG | + | chr3.1:14230446-14230465 | MS.gene50879:CDS | 40.0% |
| !!! | CCAAGGACCGTGTTTTTTAA+TGG | - | chr3.1:14230729-14230748 | None:intergenic | 40.0% |
| AACGACGGCTATTGTTCATG+GGG | + | chr3.1:14228668-14228687 | MS.gene50879:CDS | 45.0% | |
| AGAACTTGGATGTCTGTGTC+AGG | + | chr3.1:14229666-14229685 | MS.gene50879:intron | 45.0% | |
| ATAAGCATTTGTAGGGTCCC+AGG | - | chr3.1:14229816-14229835 | None:intergenic | 45.0% | |
| ATAATGTTTGGGAAGGAGCC+TGG | + | chr3.1:14229795-14229814 | MS.gene50879:CDS | 45.0% | |
| ATCTATAGTCGTCACAGCCT+CGG | + | chr3.1:14229978-14229997 | MS.gene50879:intron | 45.0% | |
| ATGTGAGTGACAAGCAAACC+TGG | - | chr3.1:14230512-14230531 | None:intergenic | 45.0% | |
| CAACGACGGCTATTGTTCAT+GGG | + | chr3.1:14228667-14228686 | MS.gene50879:CDS | 45.0% | |
| CAGAAACCAAAGCAGAAGCA+TGG | - | chr3.1:14231670-14231689 | None:intergenic | 45.0% | |
| CATATATACAACTTGGGCCC+AGG | + | chr3.1:14230491-14230510 | MS.gene50879:CDS | 45.0% | |
| CCGTCGTTGCATTTATCTTG+AGG | - | chr3.1:14228656-14228675 | None:intergenic | 45.0% | |
| CGGAGCCATGAAAAAGATGA+TGG | + | chr3.1:14232021-14232040 | MS.gene50879:intron | 45.0% | |
| CTCAGAGGCTTCAAATCTAG+TGG | + | chr3.1:14232066-14232085 | MS.gene50879:intron | 45.0% | |
| CTCCTAATCCTGACTACTAC+AGG | + | chr3.1:14231052-14231071 | MS.gene50879:CDS | 45.0% | |
| CTCCTTGCCAAATCAATCCA+AGG | + | chr3.1:14228949-14228968 | MS.gene50879:CDS | 45.0% | |
| CTGATGGGAAAGAAGGTTCT+TGG | + | chr3.1:14231226-14231245 | MS.gene50879:CDS | 45.0% | |
| CTGCAACACCTTCATTCTGT+TGG | - | chr3.1:14232173-14232192 | None:intergenic | 45.0% | |
| GGTAATGAGTTAAGCGGTGA+AGG | + | chr3.1:14230278-14230297 | MS.gene50879:intron | 45.0% | |
| TAATGTTTGGGAAGGAGCCT+GGG | + | chr3.1:14229796-14229815 | MS.gene50879:CDS | 45.0% | |
| TATACGTGCCTGTAGTAGTC+AGG | - | chr3.1:14231063-14231082 | None:intergenic | 45.0% | |
| TGATAGCCCTCAAACCTTTG+AGG | + | chr3.1:14229291-14229310 | MS.gene50879:intron | 45.0% | |
| TGCCCAATTGGCAGTGTTAA+TGG | + | chr3.1:14229951-14229970 | MS.gene50879:intron | 45.0% | |
| TGCCTGTAGTAGTCAGGATT+AGG | - | chr3.1:14231057-14231076 | None:intergenic | 45.0% | |
| TGGATCATACACACTGAGCT+TGG | + | chr3.1:14232041-14232060 | MS.gene50879:intron | 45.0% | |
| TGGGCGTAAGTGCGTAAAAA+TGG | - | chr3.1:14231274-14231293 | None:intergenic | 45.0% | |
| TGTGAGTGACAAGCAAACCT+GGG | - | chr3.1:14230511-14230530 | None:intergenic | 45.0% | |
| TTCCTACGTTATACACCACC+TGG | - | chr3.1:14229343-14229362 | None:intergenic | 45.0% | |
| TTGAGGCCACCAATCAATAG+TGG | - | chr3.1:14228639-14228658 | None:intergenic | 45.0% | |
| TTGTGCACTGGATCTGTTGT+TGG | - | chr3.1:14232675-14232694 | None:intergenic | 45.0% | |
| TTTCCTGTTGTTACCCGATG+TGG | + | chr3.1:14230233-14230252 | MS.gene50879:intron | 45.0% | |
| ! | AAAGCGGTCTGAAGTCCAAT+TGG | - | chr3.1:14230209-14230228 | None:intergenic | 45.0% |
| ! | AACTGGTTAGCTGCTTTCCA+AGG | - | chr3.1:14228876-14228895 | None:intergenic | 45.0% |
| ! | AAGCTGGAGCGTCAAAGTTT+GGG | - | chr3.1:14232752-14232771 | None:intergenic | 45.0% |
| ! | CCTCCAAGTCTTATCCTCAA+AGG | - | chr3.1:14229308-14229327 | None:intergenic | 45.0% |
| ! | CCTTTGAGGATAAGACTTGG+AGG | + | chr3.1:14229305-14229324 | MS.gene50879:CDS | 45.0% |
| !! | GACCTTGGATTGATTTGGCA+AGG | - | chr3.1:14228954-14228973 | None:intergenic | 45.0% |
| !! | TGGATTGATTTGGCAAGGAG+AGG | - | chr3.1:14228949-14228968 | None:intergenic | 45.0% |
| !! | TTGATTTGGCAAGGAGAGGA+CGG | - | chr3.1:14228945-14228964 | None:intergenic | 45.0% |
| !! | TATATTATATTATATTATAG+AGG | + | chr3.1:14231350-14231369 | MS.gene50879:intron | 5.0% |
| AAACCAATCAGCGAACTGGC+TGG | - | chr3.1:14229070-14229089 | None:intergenic | 50.0% | |
| AAACCCTCACTTGTAGCACC+CGG | + | chr3.1:14230392-14230411 | MS.gene50879:CDS | 50.0% | |
| ACACTGAGCTTGGATCTCAG+AGG | + | chr3.1:14232051-14232070 | MS.gene50879:intron | 50.0% | |
| ACAGCGCACTATTGTGGCAT+CGG | + | chr3.1:14231203-14231222 | MS.gene50879:intron | 50.0% | |
| ACGGATCCACTAGGTATTCG+TGG | - | chr3.1:14231620-14231639 | None:intergenic | 50.0% | |
| AGTCCACATCGGGTAACAAC+AGG | - | chr3.1:14230239-14230258 | None:intergenic | 50.0% | |
| CGAGAGTGGAGGAATTGAGA+AGG | - | chr3.1:14231032-14231051 | None:intergenic | 50.0% | |
| CTCGGGGTTCATGGTCTAAA+AGG | + | chr3.1:14229996-14230015 | MS.gene50879:intron | 50.0% | |
| CTGCAAACAGCGCACTATTG+TGG | + | chr3.1:14231197-14231216 | MS.gene50879:intron | 50.0% | |
| GACCAGGTGGTGTATAACGT+AGG | + | chr3.1:14229338-14229357 | MS.gene50879:CDS | 50.0% | |
| GACCTCCCTTGCATCTGAAT+CGG | - | chr3.1:14231792-14231811 | None:intergenic | 50.0% | |
| GCAACGACGGCTATTGTTCA+TGG | + | chr3.1:14228666-14228685 | MS.gene50879:CDS | 50.0% | |
| GCAGCTAACAGTGGTGGTAT+TGG | + | chr3.1:14230779-14230798 | MS.gene50879:CDS | 50.0% | |
| GGTCTCAGCAGTTTGATCTC+CGG | + | chr3.1:14229158-14229177 | MS.gene50879:intron | 50.0% | |
| TCTATAGTCGTCACAGCCTC+GGG | + | chr3.1:14229979-14229998 | MS.gene50879:intron | 50.0% | |
| TTCCGCAACTATAGCGGCTA+GGG | + | chr3.1:14232218-14232237 | MS.gene50879:intron | 50.0% | |
| TTTCCGCAACTATAGCGGCT+AGG | + | chr3.1:14232217-14232236 | MS.gene50879:intron | 50.0% | |
| ! | AACCGATTCAGATGCAAGGG+AGG | + | chr3.1:14231787-14231806 | MS.gene50879:intron | 50.0% |
| ! | CAAGCTGGAGCGTCAAAGTT+TGG | - | chr3.1:14232753-14232772 | None:intergenic | 50.0% |
| ! | CTTTTAGACCATGAACCCCG+AGG | - | chr3.1:14229998-14230017 | None:intergenic | 50.0% |
| ! | TACTAGTCTGGTGCTTCCCA+TGG | - | chr3.1:14229775-14229794 | None:intergenic | 50.0% |
| ! | TGATTTGGCAAGGAGAGGAC+GGG | - | chr3.1:14228944-14228963 | None:intergenic | 50.0% |
| ! | TTGGCTTGAATGCGCTCCAT+GGG | + | chr3.1:14229756-14229775 | MS.gene50879:CDS | 50.0% |
| !! | ACTATTGTGGCATCGGCTGA+TGG | + | chr3.1:14231210-14231229 | MS.gene50879:CDS | 50.0% |
| !! | CTATTGTGGCATCGGCTGAT+GGG | + | chr3.1:14231211-14231230 | MS.gene50879:CDS | 50.0% |
| !! | TCTGTCTTCTGGTTCAACCG+TGG | + | chr3.1:14229109-14229128 | MS.gene50879:intron | 50.0% |
| !! | TTTGGCTTGAATGCGCTCCA+TGG | + | chr3.1:14229755-14229774 | MS.gene50879:CDS | 50.0% |
| AGGATTAGGAGCGAGAGTGG+AGG | - | chr3.1:14231043-14231062 | None:intergenic | 55.0% | |
| CTATAGTCGTCACAGCCTCG+GGG | + | chr3.1:14229980-14229999 | MS.gene50879:intron | 55.0% | |
| CTCCCTTACAAGCTCAAGGC+CGG | + | chr3.1:14232001-14232020 | MS.gene50879:intron | 55.0% | |
| CTCCGGCCTTGAGCTTGTAA+GGG | - | chr3.1:14232006-14232025 | None:intergenic | 55.0% | |
| CTGCTGAGACCTCTGAGTCA+TGG | - | chr3.1:14229149-14229168 | None:intergenic | 55.0% | |
| GAACCAGCCAGTTCGCTGAT+TGG | + | chr3.1:14229064-14229083 | MS.gene50879:intron | 55.0% | |
| GTCAGGATTAGGAGCGAGAG+TGG | - | chr3.1:14231046-14231065 | None:intergenic | 55.0% | |
| TCCCCTAGCCGCTATAGTTG+CGG | - | chr3.1:14232223-14232242 | None:intergenic | 55.0% | |
| TCCGCAACTATAGCGGCTAG+GGG | + | chr3.1:14232219-14232238 | MS.gene50879:intron | 55.0% | |
| TCTAGTGGGAGAGAGAGCCT+TGG | + | chr3.1:14232081-14232100 | MS.gene50879:intron | 55.0% | |
| TCTGCATGGGTAGGAGAAGC+TGG | + | chr3.1:14230752-14230771 | MS.gene50879:CDS | 55.0% | |
| TGGGAGAGAGAGCCTTGGTT+AGG | + | chr3.1:14232086-14232105 | MS.gene50879:intron | 55.0% | |
| ! | GAGTTAAGCGGTGAAGGCGT+TGG | + | chr3.1:14230284-14230303 | MS.gene50879:CDS | 55.0% |
| !! | GAAGGCGTTGGTGCATCAGT+CGG | + | chr3.1:14230296-14230315 | MS.gene50879:CDS | 55.0% |
| !! | GCATCGGCTGATGGGAAAGA+AGG | + | chr3.1:14231219-14231238 | MS.gene50879:CDS | 55.0% |
| ACGGTCCTTGGGCTTCTGCA+TGG | + | chr3.1:14230738-14230757 | MS.gene50879:CDS | 60.0% | |
| AGGCTCTCTGCAAGACCAGG+TGG | + | chr3.1:14229325-14229344 | MS.gene50879:CDS | 60.0% | |
| ATGGGTAGGAGAAGCTGGCG+GGG | + | chr3.1:14230757-14230776 | MS.gene50879:CDS | 60.0% | |
| CATGGGTAGGAGAAGCTGGC+GGG | + | chr3.1:14230756-14230775 | MS.gene50879:CDS | 60.0% | |
| CCTACCCATGCAGAAGCCCA+AGG | - | chr3.1:14230746-14230765 | None:intergenic | 60.0% | |
| CCTTGGGCTTCTGCATGGGT+AGG | + | chr3.1:14230743-14230762 | MS.gene50879:CDS | 60.0% | |
| CGGTCCTTGGGCTTCTGCAT+GGG | + | chr3.1:14230739-14230758 | MS.gene50879:CDS | 60.0% | |
| GCATGGGTAGGAGAAGCTGG+CGG | + | chr3.1:14230755-14230774 | MS.gene50879:CDS | 60.0% | |
| GCTCCGGCCTTGAGCTTGTA+AGG | - | chr3.1:14232007-14232026 | None:intergenic | 60.0% | |
| TGGAGGCTCTCTGCAAGACC+AGG | + | chr3.1:14229322-14229341 | MS.gene50879:CDS | 60.0% | |
| ! | CCACCGGGTGCTACAAGTGA+GGG | - | chr3.1:14230398-14230417 | None:intergenic | 60.0% |
| ! | TCCACCGGGTGCTACAAGTG+AGG | - | chr3.1:14230399-14230418 | None:intergenic | 60.0% |
| CCCTCACTTGTAGCACCCGG+TGG | + | chr3.1:14230395-14230414 | MS.gene50879:CDS | 65.0% | |
| CGTCACAGCCTCGGGGTTCA+TGG | + | chr3.1:14229987-14230006 | MS.gene50879:intron | 65.0% | |
| GCTGGCGGGGCAGCTAACAG+TGG | + | chr3.1:14230770-14230789 | MS.gene50879:CDS | 70.0% | |
| GGCGGGGCAGCTAACAGTGG+TGG | + | chr3.1:14230773-14230792 | MS.gene50879:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 14228503 | 14232785 | 14228503 | ID=MS.gene50879 |
| chr3.1 | mRNA | 14228503 | 14232785 | 14228503 | ID=MS.gene50879.t1;Parent=MS.gene50879 |
| chr3.1 | exon | 14228503 | 14228712 | 14228503 | ID=MS.gene50879.t1.exon1;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14228503 | 14228712 | 14228503 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14228934 | 14228970 | 14228934 | ID=MS.gene50879.t1.exon2;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14228934 | 14228970 | 14228934 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14229297 | 14229480 | 14229297 | ID=MS.gene50879.t1.exon3;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14229297 | 14229480 | 14229297 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14229742 | 14229890 | 14229742 | ID=MS.gene50879.t1.exon4;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14229742 | 14229890 | 14229742 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14230279 | 14230512 | 14230279 | ID=MS.gene50879.t1.exon5;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14230279 | 14230512 | 14230279 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14230642 | 14230831 | 14230642 | ID=MS.gene50879.t1.exon6;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14230642 | 14230831 | 14230642 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14230948 | 14231073 | 14230948 | ID=MS.gene50879.t1.exon7;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14230948 | 14231073 | 14230948 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14231207 | 14231309 | 14231207 | ID=MS.gene50879.t1.exon8;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14231207 | 14231309 | 14231207 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| chr3.1 | exon | 14232471 | 14232785 | 14232471 | ID=MS.gene50879.t1.exon9;Parent=MS.gene50879.t1 |
| chr3.1 | CDS | 14232471 | 14232785 | 14232471 | ID=cds.MS.gene50879.t1;Parent=MS.gene50879.t1 |
| Gene Sequence |
| Protein sequence |
