Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033078.t1 | XP_013457959.1 | 94.2 | 548 | 32 | 0 | 1 | 548 | 1 | 548 | 0.00E+00 | 1078.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033078.t1 | Q9FF10 | 60.5 | 550 | 201 | 7 | 1 | 542 | 1 | 542 | 2.0e-201 | 703.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033078.t1 | A0A072V1J6 | 94.2 | 548 | 32 | 0 | 1 | 548 | 1 | 548 | 0.0e+00 | 1078.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033078 | MS.gene69310 | PPI |
| MS.gene033078 | MS.gene044430 | PPI |
| MS.gene033078 | MS.gene50879 | PPI |
| MS.gene036682 | MS.gene033078 | PPI |
| MS.gene033078 | MS.gene063475 | PPI |
| MS.gene033078 | MS.gene036682 | PPI |
| MS.gene033078 | MS.gene95196 | PPI |
| MS.gene033078 | MS.gene51808 | PPI |
| MS.gene033078 | MS.gene033803 | PPI |
| MS.gene57996 | MS.gene033078 | PPI |
| MS.gene033078 | MS.gene69866 | PPI |
| MS.gene033078 | MS.gene041370 | PPI |
| MS.gene033078 | MS.gene95198 | PPI |
| MS.gene78493 | MS.gene033078 | PPI |
| MS.gene033078 | MS.gene036317 | PPI |
| MS.gene033078 | MS.gene057926 | PPI |
| MS.gene057928 | MS.gene033078 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033078.t1 | MTR_4g109300 | 94.161 | 548 | 32 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1052 |
| MS.gene033078.t1 | MTR_4g109300 | 88.660 | 582 | 32 | 1 | 1 | 548 | 1 | 582 | 0.0 | 1034 |
| MS.gene033078.t1 | MTR_4g109300 | 94.778 | 517 | 27 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1000 |
| MS.gene033078.t1 | MTR_4g109300 | 93.548 | 403 | 26 | 0 | 146 | 548 | 1 | 403 | 0.0 | 778 |
| MS.gene033078.t1 | MTR_3g023710 | 67.151 | 551 | 147 | 4 | 1 | 547 | 1 | 521 | 0.0 | 764 |
| MS.gene033078.t1 | MTR_3g023700 | 65.455 | 550 | 158 | 3 | 1 | 548 | 1 | 520 | 0.0 | 746 |
| MS.gene033078.t1 | MTR_3g023690 | 65.265 | 547 | 157 | 4 | 1 | 545 | 1 | 516 | 0.0 | 732 |
| MS.gene033078.t1 | MTR_5g043710 | 49.813 | 536 | 229 | 5 | 9 | 542 | 6 | 503 | 0.0 | 540 |
| MS.gene033078.t1 | MTR_3g023690 | 65.012 | 403 | 109 | 3 | 145 | 545 | 56 | 428 | 0.0 | 532 |
| MS.gene033078.t1 | MTR_2g451510 | 47.723 | 549 | 255 | 10 | 3 | 542 | 11 | 536 | 3.68e-174 | 503 |
| MS.gene033078.t1 | MTR_4g116070 | 47.610 | 523 | 236 | 7 | 25 | 542 | 39 | 528 | 1.16e-156 | 458 |
| MS.gene033078.t1 | MTR_4g116040 | 39.410 | 373 | 178 | 7 | 170 | 542 | 18 | 342 | 5.23e-77 | 247 |
| MS.gene033078.t1 | MTR_4g109260 | 70.513 | 78 | 23 | 0 | 227 | 304 | 59 | 136 | 8.67e-34 | 125 |
| MS.gene033078.t1 | MTR_8g091920 | 28.610 | 367 | 137 | 11 | 172 | 518 | 2 | 263 | 5.62e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033078.t1 | AT5G07830 | 60.545 | 550 | 201 | 7 | 1 | 542 | 1 | 542 | 0.0 | 701 |
| MS.gene033078.t1 | AT5G61250 | 60.000 | 545 | 208 | 4 | 1 | 542 | 1 | 538 | 0.0 | 693 |
| MS.gene033078.t1 | AT5G61250 | 60.000 | 545 | 208 | 4 | 1 | 542 | 1 | 538 | 0.0 | 693 |
| MS.gene033078.t1 | AT5G61250 | 60.000 | 545 | 208 | 4 | 1 | 542 | 1 | 538 | 0.0 | 693 |
| MS.gene033078.t1 | AT5G34940 | 46.801 | 547 | 264 | 5 | 5 | 542 | 7 | 535 | 1.05e-171 | 496 |
| MS.gene033078.t1 | AT5G34940 | 50.000 | 376 | 183 | 2 | 5 | 376 | 7 | 381 | 9.78e-130 | 384 |
| MS.gene033078.t1 | AT5G34940 | 46.651 | 418 | 200 | 4 | 130 | 542 | 1 | 400 | 1.82e-124 | 371 |
| MS.gene033078.t1 | AT5G34940 | 45.079 | 315 | 150 | 4 | 233 | 542 | 2 | 298 | 3.30e-86 | 269 |
Find 125 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCCTTGTTTCTCTTCC+TGG | 0.115486 | 8.3:-15328581 | MS.gene033078:CDS |
| CTCTTCATCTGTTCTCAATT+TGG | 0.128874 | 8.3:-15328404 | MS.gene033078:intron |
| CACTCATCATGTATATAATT+TGG | 0.131943 | 8.3:-15326764 | MS.gene033078:CDS |
| TATTGCAGGCAGACCTTAAT+TGG | 0.188717 | 8.3:-15326287 | MS.gene033078:CDS |
| TTGAGTACTGGATCCAATTT+AGG | 0.234555 | 8.3:+15325277 | None:intergenic |
| CCATCATCTGTTAACTTTAG+TGG | 0.237968 | 8.3:+15325307 | None:intergenic |
| GATAAGCTTCTTGAGGTTTC+AGG | 0.238177 | 8.3:-15326808 | MS.gene033078:CDS |
| TGCAGGGCCATGATGACTTT+TGG | 0.268128 | 8.3:-15327207 | MS.gene033078:intron |
| TGATGGAGAAATTCCTAAAT+TGG | 0.268761 | 8.3:-15325290 | MS.gene033078:CDS |
| CAAAATTAGTCACACTGTTT+GGG | 0.269343 | 8.3:-15327160 | MS.gene033078:CDS |
| ACAAAATTAGTCACACTGTT+TGG | 0.287075 | 8.3:-15327161 | MS.gene033078:CDS |
| GCCATAGTTTCCTCCAATTA+AGG | 0.290989 | 8.3:+15326274 | None:intergenic |
| AAGATGAAAGGTGGATTGTT+TGG | 0.303097 | 8.3:-15327941 | MS.gene033078:CDS |
| ACACATTTGTGGATAGCTTT+TGG | 0.308106 | 8.3:-15326471 | MS.gene033078:intron |
| AGCTATCAGATGTCACATTC+AGG | 0.319283 | 8.3:-15325396 | MS.gene033078:CDS |
| ATGGTCCTTGGTCGGCTGCT+TGG | 0.327136 | 8.3:-15326543 | MS.gene033078:CDS |
| GAAATTGATTCATGGGAGTT+TGG | 0.328046 | 8.3:-15327075 | MS.gene033078:intron |
| ATAGACCTTGGTGTTGTATC+TGG | 0.329634 | 8.3:+15326307 | None:intergenic |
| GCTGCTTGGGTTGGAGAAGC+TGG | 0.363644 | 8.3:-15326529 | MS.gene033078:CDS |
| ATGAAATCATAAGCATTTGT+AGG | 0.373227 | 8.3:+15327123 | None:intergenic |
| ACCTTAATTGGAGGAAACTA+TGG | 0.373504 | 8.3:-15326275 | MS.gene033078:CDS |
| TGGTCCTTGGTCGGCTGCTT+GGG | 0.379161 | 8.3:-15326542 | MS.gene033078:CDS |
| ACTCATCATGTATATAATTT+GGG | 0.394197 | 8.3:-15326763 | MS.gene033078:CDS |
| CTTCTTGAGGTTTCAGGCAC+AGG | 0.398220 | 8.3:-15326802 | MS.gene033078:CDS |
| CTTGGGTTGGAGAAGCTGGC+GGG | 0.399312 | 8.3:-15326525 | MS.gene033078:CDS |
| TCATTTGCGCTACTATTGAT+TGG | 0.400129 | 8.3:-15328468 | MS.gene033078:CDS |
| CCAAGGACCATGTGTTTGAA+TGG | 0.403691 | 8.3:+15326555 | None:intergenic |
| TACACTTGCCTGTAGTAGTC+AGG | 0.410999 | 8.3:+15326221 | None:intergenic |
| TGATAGCTCTCAGGCCTTTG+AGG | 0.412095 | 8.3:-15328042 | MS.gene033078:intron |
| ACAATAAATGCAATAGATAA+AGG | 0.415778 | 8.3:+15325226 | None:intergenic |
| CAAGCTGGAGCATCAAGGTT+GGG | 0.423704 | 8.3:+15325199 | None:intergenic |
| CCTTGGTCGGCTGCTTGGGT+TGG | 0.431850 | 8.3:-15326538 | MS.gene033078:CDS |
| GTCAGGATTGGGAGTGAAAG+TGG | 0.436774 | 8.3:+15326238 | None:intergenic |
| CCACTAAAGTTAACAGATGA+TGG | 0.441916 | 8.3:-15325307 | MS.gene033078:CDS |
| AAGAATACGAAATTGATTCA+TGG | 0.442797 | 8.3:-15327083 | MS.gene033078:CDS |
| ACCAGGAGGTTTCTATCAAA+AGG | 0.447090 | 8.3:-15326839 | MS.gene033078:CDS |
| ATCGAAGTAAACGGAGTTCA+AGG | 0.452048 | 8.3:-15328514 | MS.gene033078:CDS |
| TTGAACTCCGTTTACTTCGA+TGG | 0.454323 | 8.3:+15328516 | None:intergenic |
| GGTAATGAATTGAGTGGTAA+AGG | 0.458190 | 8.3:-15326970 | MS.gene033078:CDS |
| CATGTATATAATTTGGGACC+AGG | 0.472337 | 8.3:-15326757 | MS.gene033078:intron |
| CATGGTTCCATCGAAGTAAA+CGG | 0.477425 | 8.3:-15328523 | MS.gene033078:CDS |
| TTGCCTGTAGTAGTCAGGAT+TGG | 0.480012 | 8.3:+15326226 | None:intergenic |
| CCATTCAAACACATGGTCCT+TGG | 0.480449 | 8.3:-15326555 | MS.gene033078:CDS |
| ACTTATGCCCATTGTTCAAA+AGG | 0.480564 | 8.3:-15325810 | MS.gene033078:CDS |
| TGAAATCATAAGCATTTGTA+GGG | 0.485591 | 8.3:+15327124 | None:intergenic |
| TGCCTGTAGTAGTCAGGATT+GGG | 0.485923 | 8.3:+15326227 | None:intergenic |
| ACACTGTTTGGGGAGGAGAC+TGG | 0.488190 | 8.3:-15327149 | MS.gene033078:CDS |
| TTACTGTTTCTAAAACAAGC+TGG | 0.489026 | 8.3:+15325184 | None:intergenic |
| TGATGTTTCTGACACATTTG+TGG | 0.489087 | 8.3:-15326482 | MS.gene033078:CDS |
| CTCCCAATCCTGACTACTAC+AGG | 0.491346 | 8.3:-15326229 | MS.gene033078:intron |
| AGAATACGAAATTGATTCAT+GGG | 0.492373 | 8.3:-15327082 | MS.gene033078:CDS |
| TGTAGGTACTTAGATCAACT+TGG | 0.494140 | 8.3:-15326338 | MS.gene033078:intron |
| GTGACTACAATTATTGCCCC+TGG | 0.494879 | 8.3:-15328429 | MS.gene033078:CDS |
| TGGGATGCTTACACATGAAA+AGG | 0.495260 | 8.3:-15327910 | MS.gene033078:CDS |
| TTTGGCTTGAATGCACTCCA+TGG | 0.503899 | 8.3:-15327189 | MS.gene033078:CDS |
| ACAACACCAAGGTCTATTGC+AGG | 0.505824 | 8.3:-15326301 | MS.gene033078:CDS |
| TCTACCTTGTTTAAGTGCGC+AGG | 0.509036 | 8.3:+15326604 | None:intergenic |
| TTGGCTTGAATGCACTCCAT+GGG | 0.511301 | 8.3:-15327188 | MS.gene033078:CDS |
| GAGGTTTCTATCAAAAGGAA+TGG | 0.511315 | 8.3:-15326834 | MS.gene033078:CDS |
| AGCAAAACCATGTTGCTGAA+TGG | 0.517693 | 8.3:-15325334 | MS.gene033078:CDS |
| TACCTTGTATTGCCTTTGCA+AGG | 0.519151 | 8.3:+15328204 | None:intergenic |
| GTGTTGATGCTGCACAGTAC+GGG | 0.519288 | 8.3:-15326936 | MS.gene033078:CDS |
| ATGGTTACTTGATAGCTCTC+AGG | 0.519664 | 8.3:-15328051 | MS.gene033078:intron |
| GCTTGGGTTGGAGAAGCTGG+CGG | 0.524504 | 8.3:-15326526 | MS.gene033078:CDS |
| TGTATTGCCTTTGCAAGGAT+AGG | 0.525022 | 8.3:+15328209 | None:intergenic |
| AGAGAAAATGAAGATGCAAA+AGG | 0.525068 | 8.3:-15325484 | MS.gene033078:CDS |
| GAGAACAGATGAAGAGCCCC+AGG | 0.527394 | 8.3:+15328411 | None:intergenic |
| TTTGCGCTACTATTGATTGG+TGG | 0.527563 | 8.3:-15328465 | MS.gene033078:CDS |
| TGACTACAATTATTGCCCCT+GGG | 0.531853 | 8.3:-15328428 | MS.gene033078:CDS |
| ACAAGCTGGAGCATCAAGGT+TGG | 0.532713 | 8.3:+15325198 | None:intergenic |
| CCTTTGAGGATAAGAGTTGG+AGG | 0.533950 | 8.3:-15328028 | MS.gene033078:CDS |
| CAACAATTTCAAAAGATGAA+AGG | 0.535454 | 8.3:-15327953 | MS.gene033078:CDS |
| GCTATCAGATGTCACATTCA+GGG | 0.537165 | 8.3:-15325395 | MS.gene033078:CDS |
| GAATATACACTATTGAGTAC+TGG | 0.537456 | 8.3:+15325265 | None:intergenic |
| AAGCTGGAGCATCAAGGTTG+GGG | 0.539957 | 8.3:+15325200 | None:intergenic |
| TGCAGGCAGACCTTAATTGG+AGG | 0.544879 | 8.3:-15326284 | MS.gene033078:CDS |
| GCAAGACCGAGTGCTGTATG+AGG | 0.545556 | 8.3:-15327999 | MS.gene033078:CDS |
| ATCCTTGCAAAGGCAATACA+AGG | 0.545859 | 8.3:-15328206 | MS.gene033078:intron |
| TTGGGTTGGAGAAGCTGGCG+GGG | 0.549573 | 8.3:-15326524 | MS.gene033078:CDS |
| TGGCATAAGCTTATGGGGAA+AGG | 0.557644 | 8.3:-15325876 | MS.gene033078:CDS |
| GTCTAATCCTATCCTTGCAA+AGG | 0.563157 | 8.3:-15328216 | MS.gene033078:CDS |
| TAAAACAAGCTGGAGCATCA+AGG | 0.564524 | 8.3:+15325194 | None:intergenic |
| AGTGTTGATGCTGCACAGTA+CGG | 0.569712 | 8.3:-15326937 | MS.gene033078:CDS |
| AAATCAAACGAAGAGAAACC+AGG | 0.578290 | 8.3:+15328563 | None:intergenic |
| CATTCATTAATCAACTCAAG+AGG | 0.579184 | 8.3:-15325441 | MS.gene033078:CDS |
| CCTCCTGGTGCTATAAGTGA+TGG | 0.580527 | 8.3:+15326853 | None:intergenic |
| TATAAGTGATGGTTTGAACT+TGG | 0.581272 | 8.3:+15326864 | None:intergenic |
| TGAAAGTGGTGACATTAAGA+AGG | 0.582569 | 8.3:+15326252 | None:intergenic |
| AATGAATGAATTATCTATGT+GGG | 0.584815 | 8.3:+15325456 | None:intergenic |
| AGGCCTTTGAGGATAAGAGT+TGG | 0.586029 | 8.3:-15328031 | MS.gene033078:CDS |
| GGCGGGGCATTCAACAGTGG+TGG | 0.587450 | 8.3:-15326508 | MS.gene033078:CDS |
| TTCCTACCTCATACAGCACT+CGG | 0.589704 | 8.3:+15327993 | None:intergenic |
| ATTCAAGCCAAAAGTCATCA+TGG | 0.593934 | 8.3:+15327200 | None:intergenic |
| ATTCATTAATCAACTCAAGA+GGG | 0.594118 | 8.3:-15325440 | MS.gene033078:CDS |
| GAATTGAGTGGTAAAGGCAT+CGG | 0.596750 | 8.3:-15326964 | MS.gene033078:CDS |
| AAAATTAGTCACACTGTTTG+GGG | 0.597978 | 8.3:-15327159 | MS.gene033078:CDS |
| CAATTTCAAAAGATGAAAGG+TGG | 0.600121 | 8.3:-15327950 | MS.gene033078:CDS |
| TTGTAGTCACACTTATCTTG+AGG | 0.600422 | 8.3:+15328442 | None:intergenic |
| GCTTGAATGCACTCCATGGG+AGG | 0.602432 | 8.3:-15327185 | MS.gene033078:CDS |
| CCTCCAACTCTTATCCTCAA+AGG | 0.605128 | 8.3:+15328028 | None:intergenic |
| TGGACTACCATTCAGCAACA+TGG | 0.605541 | 8.3:+15325327 | None:intergenic |
| TCAAACACATGGTCCTTGGT+CGG | 0.613086 | 8.3:-15326551 | MS.gene033078:CDS |
| GGTCTGCCTGCAATAGACCT+TGG | 0.615200 | 8.3:+15326295 | None:intergenic |
| CATATAGGTAATGAATTGAG+TGG | 0.618353 | 8.3:-15326976 | MS.gene033078:intron |
| CCAACCCAAGCAGCCGACCA+AGG | 0.618948 | 8.3:+15326538 | None:intergenic |
| GATGCTTACACATGAAAAGG+TGG | 0.621026 | 8.3:-15327907 | MS.gene033078:CDS |
| ATGGTTTGATAAGCTTCTTG+AGG | 0.622444 | 8.3:-15326815 | MS.gene033078:CDS |
| GACTACAATTATTGCCCCTG+GGG | 0.626301 | 8.3:-15328427 | MS.gene033078:CDS |
| AGAAACCAGGAAGAGAAACA+AGG | 0.628706 | 8.3:+15328576 | None:intergenic |
| AGATCCTGCGCACTTAAACA+AGG | 0.630546 | 8.3:-15326608 | MS.gene033078:CDS |
| TCAACTCAAGATATTGAACA+TGG | 0.630831 | 8.3:-15328541 | MS.gene033078:CDS |
| TCAGAAACCATTCAAACACA+TGG | 0.631922 | 8.3:-15326562 | MS.gene033078:CDS |
| TAATGAATGAATTATCTATG+TGG | 0.634240 | 8.3:+15325455 | None:intergenic |
| ATTAGTCACACTGTTTGGGG+AGG | 0.644368 | 8.3:-15327156 | MS.gene033078:CDS |
| AAACCATCACTTATAGCACC+AGG | 0.645834 | 8.3:-15326856 | MS.gene033078:CDS |
| GACCGAGTGCTGTATGAGGT+AGG | 0.656808 | 8.3:-15327995 | MS.gene033078:CDS |
| AGAACAGATGAAGAGCCCCA+GGG | 0.657039 | 8.3:+15328412 | None:intergenic |
| GGAAGAGAAACAAGGCAAGG+TGG | 0.665239 | 8.3:+15328584 | None:intergenic |
| CCAGGAAGAGAAACAAGGCA+AGG | 0.670315 | 8.3:+15328581 | None:intergenic |
| GCTGGCGGGGCATTCAACAG+TGG | 0.677810 | 8.3:-15326511 | MS.gene033078:CDS |
| ATGCTTACACATGAAAAGGT+GGG | 0.687081 | 8.3:-15327906 | MS.gene033078:CDS |
| GAACAGATGAAGAGCCCCAG+GGG | 0.708698 | 8.3:+15328413 | None:intergenic |
| ATCAGATGTCACATTCAGGG+AGG | 0.730151 | 8.3:-15325392 | MS.gene033078:CDS |
| CCATCACTTATAGCACCAGG+AGG | 0.730152 | 8.3:-15326853 | MS.gene033078:CDS |
| AGCATCCAGATACAACACCA+AGG | 0.744343 | 8.3:-15326312 | MS.gene033078:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATGTAAAATGA+AGG | - | chr8.3:15327576-15327595 | MS.gene033078:intron | 10.0% |
| !!! | ATGAAAAATAATTTTTTGTT+AGG | - | chr8.3:15327751-15327770 | MS.gene033078:intron | 10.0% |
| !!! | TGAAAAATAATTTTTTGTTA+GGG | - | chr8.3:15327752-15327771 | MS.gene033078:intron | 10.0% |
| !! | CTGAAATTTAAATTAATTGT+AGG | - | chr8.3:15327414-15327433 | MS.gene033078:intron | 15.0% |
| !!! | AAAAATAATTTTTTGTTAGG+GGG | - | chr8.3:15327754-15327773 | MS.gene033078:intron | 15.0% |
| !!! | AAATTGTTGAAGAATTTTAA+GGG | - | chr8.3:15327628-15327647 | MS.gene033078:intron | 15.0% |
| !!! | AATCATTTTTTCAAAAATAC+AGG | - | chr8.3:15325894-15325913 | MS.gene033078:intron | 15.0% |
| !!! | AATCTTGGAATATTTATTTT+AGG | - | chr8.3:15325674-15325693 | MS.gene033078:intron | 15.0% |
| !!! | ATCATTTTTTCAAAAATACA+GGG | - | chr8.3:15325895-15325914 | MS.gene033078:intron | 15.0% |
| !!! | GAAAAATAATTTTTTGTTAG+GGG | - | chr8.3:15327753-15327772 | MS.gene033078:intron | 15.0% |
| !!! | TAAATGATTTGTTTTTGTTT+AGG | - | chr8.3:15327108-15327127 | MS.gene033078:CDS | 15.0% |
| !!! | TAAATTGTTGAAGAATTTTA+AGG | - | chr8.3:15327627-15327646 | MS.gene033078:intron | 15.0% |
| !!! | TTATGCTTTATTTTGTAAAA+AGG | - | chr8.3:15327379-15327398 | MS.gene033078:intron | 15.0% |
| !! | AAGAAATTAAGAATGGTTAT+AGG | + | chr8.3:15328170-15328189 | None:intergenic | 20.0% |
| !! | AATGAATGAATTATCTATGT+GGG | + | chr8.3:15328316-15328335 | None:intergenic | 20.0% |
| !! | ACAAAAAAATGAACACAAAA+TGG | + | chr8.3:15327346-15327365 | None:intergenic | 20.0% |
| !! | ACAATAAATGCAATAGATAA+AGG | + | chr8.3:15328546-15328565 | None:intergenic | 20.0% |
| !! | ACTCATCATGTATATAATTT+GGG | - | chr8.3:15327006-15327025 | MS.gene033078:intron | 20.0% |
| !! | AGAGTTTGAAAAGTTAAATT+AGG | - | chr8.3:15325993-15326012 | MS.gene033078:intron | 20.0% |
| !! | TAATGAATGAATTATCTATG+TGG | + | chr8.3:15328317-15328336 | None:intergenic | 20.0% |
| !! | TGATGTTATTCTTTCTATAA+TGG | - | chr8.3:15325699-15325718 | MS.gene033078:intron | 20.0% |
| !!! | AATTTCGTATTCTTTTGATA+TGG | + | chr8.3:15326680-15326699 | None:intergenic | 20.0% |
| !!! | ATAAATCTAATCCTATGTTT+TGG | - | chr8.3:15327844-15327863 | MS.gene033078:intron | 20.0% |
| !!! | CATTTTTTTGTGCTAAATTA+AGG | - | chr8.3:15327355-15327374 | MS.gene033078:intron | 20.0% |
| !!! | GTCTTTTTTATTAGAATATG+AGG | - | chr8.3:15327707-15327726 | MS.gene033078:intron | 20.0% |
| !!! | TTTAGTTCTTGAAATTGTAA+AGG | - | chr8.3:15326176-15326195 | MS.gene033078:intron | 20.0% |
| ! | AAAAAATGAACACAAAATGG+TGG | + | chr8.3:15327343-15327362 | None:intergenic | 25.0% |
| ! | AAAGCAAGGTTGAATATAAA+TGG | - | chr8.3:15327685-15327704 | MS.gene033078:intron | 25.0% |
| ! | AAATTAAGAATGGTTATAGG+AGG | + | chr8.3:15328167-15328186 | None:intergenic | 25.0% |
| ! | AACAAATCATTTAAACCTGT+AGG | + | chr8.3:15327101-15327120 | None:intergenic | 25.0% |
| ! | AATTGCCCATACATATTATA+GGG | + | chr8.3:15327819-15327838 | None:intergenic | 25.0% |
| ! | AGGATGAAAGAAATTAAGAA+TGG | + | chr8.3:15328177-15328196 | None:intergenic | 25.0% |
| ! | ATGAAATCATAAGCATTTGT+AGG | + | chr8.3:15326649-15326668 | None:intergenic | 25.0% |
| ! | ATTCATTAATCAACTCAAGA+GGG | - | chr8.3:15328329-15328348 | MS.gene033078:intron | 25.0% |
| ! | CAAAATCAAATCCAAAACAT+AGG | + | chr8.3:15327858-15327877 | None:intergenic | 25.0% |
| ! | CAACAATTTCAAAAGATGAA+AGG | - | chr8.3:15325816-15325835 | MS.gene033078:CDS | 25.0% |
| ! | CACTCATCATGTATATAATT+TGG | - | chr8.3:15327005-15327024 | MS.gene033078:intron | 25.0% |
| ! | CTTATAACAATATATGCAAG+TGG | - | chr8.3:15326478-15326497 | MS.gene033078:CDS | 25.0% |
| ! | TAAACAGAAACAGTTTCATT+TGG | + | chr8.3:15326124-15326143 | None:intergenic | 25.0% |
| ! | TAAATTAGGTTCTCTTATGT+AGG | - | chr8.3:15326007-15326026 | MS.gene033078:intron | 25.0% |
| ! | TAATTGCCCATACATATTAT+AGG | + | chr8.3:15327820-15327839 | None:intergenic | 25.0% |
| ! | TCTCAATTTGGTTAGTATTT+AGG | - | chr8.3:15325377-15325396 | MS.gene033078:CDS | 25.0% |
| ! | TGAAATCATAAGCATTTGTA+GGG | + | chr8.3:15326648-15326667 | None:intergenic | 25.0% |
| ! | TTATGTCAACTCTATTTCAT+TGG | - | chr8.3:15326748-15326767 | MS.gene033078:intron | 25.0% |
| ! | TTGAATTTAACTCAACACAT+TGG | - | chr8.3:15328135-15328154 | MS.gene033078:intron | 25.0% |
| ! | TTTACTAGTAGTATCAATCT+TGG | - | chr8.3:15325659-15325678 | MS.gene033078:intron | 25.0% |
| !! | AACTTTTCAAACTCTTACTT+TGG | + | chr8.3:15325988-15326007 | None:intergenic | 25.0% |
| !! | AAGAATACGAAATTGATTCA+TGG | - | chr8.3:15326686-15326705 | MS.gene033078:intron | 25.0% |
| !! | ACATTGTTTCTTAGATCATA+TGG | + | chr8.3:15325616-15325635 | None:intergenic | 25.0% |
| !! | AGAATACGAAATTGATTCAT+GGG | - | chr8.3:15326687-15326706 | MS.gene033078:intron | 25.0% |
| !! | ATTTAGCACCACAATTTTAA+AGG | - | chr8.3:15326272-15326291 | MS.gene033078:CDS | 25.0% |
| !! | ATTTGTTAGAATATTCCTAC+AGG | - | chr8.3:15327083-15327102 | MS.gene033078:CDS | 25.0% |
| !! | TAAAATTGTGGTGCTAAATT+TGG | + | chr8.3:15326271-15326290 | None:intergenic | 25.0% |
| !!! | AGGTGTTTTATTGATTTTGA+TGG | - | chr8.3:15326342-15326361 | MS.gene033078:intron | 25.0% |
| !!! | CTTTCATCTTTTGAAATTGT+TGG | + | chr8.3:15325818-15325837 | None:intergenic | 25.0% |
| !!! | GTTTTATTGATTTTGATGGA+AGG | - | chr8.3:15326346-15326365 | MS.gene033078:intron | 25.0% |
| !!! | TAAAAATGCATTGCTGTTTT+AGG | + | chr8.3:15325643-15325662 | None:intergenic | 25.0% |
| AAAATTAGTCACACTGTTTG+GGG | - | chr8.3:15326610-15326629 | MS.gene033078:CDS | 30.0% | |
| AAAGCTTTCGATACAGTATA+GGG | + | chr8.3:15325486-15325505 | None:intergenic | 30.0% | |
| AAATTTGAGAGACAATTTCG+TGG | - | chr8.3:15326420-15326439 | MS.gene033078:intron | 30.0% | |
| ACAAAATTAGTCACACTGTT+TGG | - | chr8.3:15326608-15326627 | MS.gene033078:CDS | 30.0% | |
| ACTTAGAATTTATCACTTGC+AGG | - | chr8.3:15326545-15326564 | MS.gene033078:CDS | 30.0% | |
| AGAGAAAATGAAGATGCAAA+AGG | - | chr8.3:15328285-15328304 | MS.gene033078:intron | 30.0% | |
| CAAAATTAGTCACACTGTTT+GGG | - | chr8.3:15326609-15326628 | MS.gene033078:CDS | 30.0% | |
| CAATTTCAAAAGATGAAAGG+TGG | - | chr8.3:15325819-15325838 | MS.gene033078:CDS | 30.0% | |
| CACTCAATTCATTACCTATA+TGG | + | chr8.3:15326795-15326814 | None:intergenic | 30.0% | |
| CATATAGGTAATGAATTGAG+TGG | - | chr8.3:15326793-15326812 | MS.gene033078:CDS | 30.0% | |
| CATTCATTAATCAACTCAAG+AGG | - | chr8.3:15328328-15328347 | MS.gene033078:intron | 30.0% | |
| CTTAGAATTTATCACTTGCA+GGG | - | chr8.3:15326546-15326565 | MS.gene033078:CDS | 30.0% | |
| GAATATACACTATTGAGTAC+TGG | + | chr8.3:15328507-15328526 | None:intergenic | 30.0% | |
| GACTATTAAAGTCAATAAGC+AGG | - | chr8.3:15326322-15326341 | MS.gene033078:CDS | 30.0% | |
| TATAAGTGATGGTTTGAACT+TGG | + | chr8.3:15326908-15326927 | None:intergenic | 30.0% | |
| TCAACTCAAGATATTGAACA+TGG | - | chr8.3:15325228-15325247 | MS.gene033078:CDS | 30.0% | |
| TCTGCTATAGTCATTAATAG+AGG | - | chr8.3:15327049-15327068 | MS.gene033078:intron | 30.0% | |
| TGATGGAGAAATTCCTAAAT+TGG | - | chr8.3:15328479-15328498 | MS.gene033078:CDS | 30.0% | |
| ! | AGAAGTACATTATGACAATG+AGG | - | chr8.3:15326143-15326162 | MS.gene033078:intron | 30.0% |
| ! | GGATTGTTTGGATTTTCAAT+GGG | - | chr8.3:15325840-15325859 | MS.gene033078:CDS | 30.0% |
| ! | GTGACTAAATTGACTTTAAG+CGG | + | chr8.3:15326244-15326263 | None:intergenic | 30.0% |
| ! | TGGATTGTTTGGATTTTCAA+TGG | - | chr8.3:15325839-15325858 | MS.gene033078:CDS | 30.0% |
| ! | TTTTAGTCCTCGAAATTGTA+AGG | + | chr8.3:15326446-15326465 | None:intergenic | 30.0% |
| !! | ACAGAGAACCTTTAAAATTG+TGG | + | chr8.3:15326283-15326302 | None:intergenic | 30.0% |
| !! | CAACATGGTTTTGCTTTTAA+GGG | + | chr8.3:15328430-15328449 | None:intergenic | 30.0% |
| !! | CAGAAAAATCACTTTTATGC+TGG | - | chr8.3:15326521-15326540 | MS.gene033078:CDS | 30.0% |
| !! | TCAATGTTGATTGACTTTTC+AGG | - | chr8.3:15325526-15325545 | MS.gene033078:CDS | 30.0% |
| !! | TGTTGAAGAATTTTAAGGGT+CGG | - | chr8.3:15327632-15327651 | MS.gene033078:intron | 30.0% |
| !! | TTACTGTTTCTAAAACAAGC+TGG | + | chr8.3:15328588-15328607 | None:intergenic | 30.0% |
| !! | TTGCTATTTCGCAAACTTAA+AGG | + | chr8.3:15326216-15326235 | None:intergenic | 30.0% |
| !!! | ATCTTTTGAAATTGTTGGCA+AGG | + | chr8.3:15325813-15325832 | None:intergenic | 30.0% |
| !!! | CATTATCTTTTGGTGTTAAG+TGG | + | chr8.3:15328407-15328426 | None:intergenic | 30.0% |
| !!! | CTTTTAAGGGCATTATCTTT+TGG | + | chr8.3:15328417-15328436 | None:intergenic | 30.0% |
| !!! | TCTTTTGAAATTGTTGGCAA+GGG | + | chr8.3:15325812-15325831 | None:intergenic | 30.0% |
| AAACTCTTACTTTGGCAAGA+AGG | + | chr8.3:15325980-15325999 | None:intergenic | 35.0% | |
| AAATCAAACGAAGAGAAACC+AGG | + | chr8.3:15325209-15325228 | None:intergenic | 35.0% | |
| AATAAGTGGAGCTTAAAGCA+AGG | - | chr8.3:15327671-15327690 | MS.gene033078:intron | 35.0% | |
| ACCTTAATTGGAGGAAACTA+TGG | - | chr8.3:15327494-15327513 | MS.gene033078:intron | 35.0% | |
| ACTTATGCCCATTGTTCAAA+AGG | - | chr8.3:15327959-15327978 | MS.gene033078:CDS | 35.0% | |
| ATGCTTACACATGAAAAGGT+GGG | - | chr8.3:15325863-15325882 | MS.gene033078:CDS | 35.0% | |
| ATGGTTTGATAAGCTTCTTG+AGG | - | chr8.3:15326954-15326973 | MS.gene033078:CDS | 35.0% | |
| ATGTCAAATGTTAGTGTGCA+GGG | + | chr8.3:15328052-15328071 | None:intergenic | 35.0% | |
| ATTAGGTTCTCTTATGTAGG+AGG | - | chr8.3:15326010-15326029 | MS.gene033078:intron | 35.0% | |
| ATTCAAGCCAAAAGTCATCA+TGG | + | chr8.3:15326572-15326591 | None:intergenic | 35.0% | |
| CAAAGCTTTCGATACAGTAT+AGG | + | chr8.3:15325487-15325506 | None:intergenic | 35.0% | |
| CAGAAAGAACTATGTAAACC+TGG | + | chr8.3:15327033-15327052 | None:intergenic | 35.0% | |
| CCACTAAAGTTAACAGATGA+TGG | - | chr8.3:15328462-15328481 | MS.gene033078:CDS | 35.0% | |
| CCATCATCTGTTAACTTTAG+TGG | + | chr8.3:15328465-15328484 | None:intergenic | 35.0% | |
| CTCTTCATCTGTTCTCAATT+TGG | - | chr8.3:15325365-15325384 | MS.gene033078:CDS | 35.0% | |
| CTTAATTTCTTTCATCCTGC+AGG | - | chr8.3:15328179-15328198 | MS.gene033078:intron | 35.0% | |
| GAGGTTTCTATCAAAAGGAA+TGG | - | chr8.3:15326935-15326954 | MS.gene033078:CDS | 35.0% | |
| GGTAATGAATTGAGTGGTAA+AGG | - | chr8.3:15326799-15326818 | MS.gene033078:CDS | 35.0% | |
| TATGTCAAATGTTAGTGTGC+AGG | + | chr8.3:15328053-15328072 | None:intergenic | 35.0% | |
| TCAGAAACCATTCAAACACA+TGG | - | chr8.3:15327207-15327226 | MS.gene033078:intron | 35.0% | |
| TCATTTGCGCTACTATTGAT+TGG | - | chr8.3:15325301-15325320 | MS.gene033078:CDS | 35.0% | |
| TGAAAGTGGTGACATTAAGA+AGG | + | chr8.3:15327520-15327539 | None:intergenic | 35.0% | |
| TGGGCATAAGTTCGTAAAAA+TGG | + | chr8.3:15327950-15327969 | None:intergenic | 35.0% | |
| TGTAGGTACTTAGATCAACT+TGG | - | chr8.3:15327431-15327450 | MS.gene033078:intron | 35.0% | |
| TTAGGTTCTCTTATGTAGGA+GGG | - | chr8.3:15326011-15326030 | MS.gene033078:intron | 35.0% | |
| TTGTAGTCACACTTATCTTG+AGG | + | chr8.3:15325330-15325349 | None:intergenic | 35.0% | |
| ! | AATGAACACAAAATGGTGGA+AGG | + | chr8.3:15327339-15327358 | None:intergenic | 35.0% |
| ! | ACACATTTGTGGATAGCTTT+TGG | - | chr8.3:15327298-15327317 | MS.gene033078:intron | 35.0% |
| ! | ACTTTTGTGGCATAAGCTTA+TGG | - | chr8.3:15327886-15327905 | MS.gene033078:CDS | 35.0% |
| ! | CATGTATATAATTTGGGACC+AGG | - | chr8.3:15327012-15327031 | MS.gene033078:intron | 35.0% |
| ! | CTTTTGTGGCATAAGCTTAT+GGG | - | chr8.3:15327887-15327906 | MS.gene033078:CDS | 35.0% |
| ! | GAAATTGATTCATGGGAGTT+TGG | - | chr8.3:15326694-15326713 | MS.gene033078:intron | 35.0% |
| ! | TACTCTGCCTTTTGAACAAT+GGG | + | chr8.3:15327969-15327988 | None:intergenic | 35.0% |
| ! | TGATGTTTCTGACACATTTG+TGG | - | chr8.3:15327287-15327306 | MS.gene033078:intron | 35.0% |
| ! | TTACTCTGCCTTTTGAACAA+TGG | + | chr8.3:15327970-15327989 | None:intergenic | 35.0% |
| ! | TTTTGTGGCATAAGCTTATG+GGG | - | chr8.3:15327888-15327907 | MS.gene033078:CDS | 35.0% |
| !! | AAGATGAAAGGTGGATTGTT+TGG | - | chr8.3:15325828-15325847 | MS.gene033078:CDS | 35.0% |
| !! | GCAACATGGTTTTGCTTTTA+AGG | + | chr8.3:15328431-15328450 | None:intergenic | 35.0% |
| !! | TTGAGTACTGGATCCAATTT+AGG | + | chr8.3:15328495-15328514 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATTGTTGGCAAG+GGG | + | chr8.3:15325811-15325830 | None:intergenic | 35.0% |
| !!! | GGATAGCTTTTGGTAATGTT+TGG | - | chr8.3:15327308-15327327 | MS.gene033078:intron | 35.0% |
| !!! | TGCTATCACTTTTTGTAGCT+TGG | - | chr8.3:15326092-15326111 | MS.gene033078:intron | 35.0% |
| AAACCATCACTTATAGCACC+AGG | - | chr8.3:15326913-15326932 | MS.gene033078:CDS | 40.0% | |
| ACCAGGAGGTTTCTATCAAA+AGG | - | chr8.3:15326930-15326949 | MS.gene033078:CDS | 40.0% | |
| AGAAACCAGGAAGAGAAACA+AGG | + | chr8.3:15325196-15325215 | None:intergenic | 40.0% | |
| AGCAAAACCATGTTGCTGAA+TGG | - | chr8.3:15328435-15328454 | MS.gene033078:CDS | 40.0% | |
| AGCTATCAGATGTCACATTC+AGG | - | chr8.3:15328373-15328392 | MS.gene033078:intron | 40.0% | |
| ATCCTTGCAAAGGCAATACA+AGG | - | chr8.3:15325563-15325582 | MS.gene033078:CDS | 40.0% | |
| ATCGAAGTAAACGGAGTTCA+AGG | - | chr8.3:15325255-15325274 | MS.gene033078:CDS | 40.0% | |
| ATTTCTTTCATCCTGCAGGA+TGG | - | chr8.3:15328183-15328202 | MS.gene033078:intron | 40.0% | |
| CATGGTTCCATCGAAGTAAA+CGG | - | chr8.3:15325246-15325265 | MS.gene033078:CDS | 40.0% | |
| CTTTGGCAAGAAGGAAAAAG+AGG | + | chr8.3:15325971-15325990 | None:intergenic | 40.0% | |
| GATAAGCTTCTTGAGGTTTC+AGG | - | chr8.3:15326961-15326980 | MS.gene033078:CDS | 40.0% | |
| GATGCTTACACATGAAAAGG+TGG | - | chr8.3:15325862-15325881 | MS.gene033078:CDS | 40.0% | |
| GCCATAGTTTCCTCCAATTA+AGG | + | chr8.3:15327498-15327517 | None:intergenic | 40.0% | |
| GCTATCAGATGTCACATTCA+GGG | - | chr8.3:15328374-15328393 | MS.gene033078:intron | 40.0% | |
| GTCTAATCCTATCCTTGCAA+AGG | - | chr8.3:15325553-15325572 | MS.gene033078:CDS | 40.0% | |
| TACCTTGTATTGCCTTTGCA+AGG | + | chr8.3:15325568-15325587 | None:intergenic | 40.0% | |
| TATTGCAGGCAGACCTTAAT+TGG | - | chr8.3:15327482-15327501 | MS.gene033078:intron | 40.0% | |
| TGACTACAATTATTGCCCCT+GGG | - | chr8.3:15325341-15325360 | MS.gene033078:CDS | 40.0% | |
| TGGGATGCTTACACATGAAA+AGG | - | chr8.3:15325859-15325878 | MS.gene033078:CDS | 40.0% | |
| TGTATTGCCTTTGCAAGGAT+AGG | + | chr8.3:15325563-15325582 | None:intergenic | 40.0% | |
| TTCTTTGCATGCTGCCATAT+AGG | - | chr8.3:15326778-15326797 | MS.gene033078:CDS | 40.0% | |
| TTGAACTCCGTTTACTTCGA+TGG | + | chr8.3:15325256-15325275 | None:intergenic | 40.0% | |
| ! | ATGGTTACTTGATAGCTCTC+AGG | - | chr8.3:15325718-15325737 | MS.gene033078:intron | 40.0% |
| ! | GAATTGAGTGGTAAAGGCAT+CGG | - | chr8.3:15326805-15326824 | MS.gene033078:CDS | 40.0% |
| ! | TAAAACAAGCTGGAGCATCA+AGG | + | chr8.3:15328578-15328597 | None:intergenic | 40.0% |
| ! | TCCTTTTGATAGAAACCTCC+TGG | + | chr8.3:15326934-15326953 | None:intergenic | 40.0% |
| ! | TTTGCGCTACTATTGATTGG+TGG | - | chr8.3:15325304-15325323 | MS.gene033078:CDS | 40.0% |
| ! | TTTTGAGCAGTGCACTTTTG+TGG | - | chr8.3:15327873-15327892 | MS.gene033078:intron | 40.0% |
| !! | ATAGACCTTGGTGTTGTATC+TGG | + | chr8.3:15327465-15327484 | None:intergenic | 40.0% |
| !!! | AACTCAAGAGGGCATTTTCT+TGG | - | chr8.3:15328340-15328359 | MS.gene033078:intron | 40.0% |
| !!! | ACTCAAGAGGGCATTTTCTT+GGG | - | chr8.3:15328341-15328360 | MS.gene033078:intron | 40.0% |
| ACAACACCAAGGTCTATTGC+AGG | - | chr8.3:15327468-15327487 | MS.gene033078:intron | 45.0% | |
| AGATCCTGCGCACTTAAACA+AGG | - | chr8.3:15327161-15327180 | MS.gene033078:CDS | 45.0% | |
| AGCATCCAGATACAACACCA+AGG | - | chr8.3:15327457-15327476 | MS.gene033078:intron | 45.0% | |
| ATATTATAGGGCCGGCCTAA+GGG | + | chr8.3:15327807-15327826 | None:intergenic | 45.0% | |
| ATCAGATGTCACATTCAGGG+AGG | - | chr8.3:15328377-15328396 | MS.gene033078:intron | 45.0% | |
| ATTAGTCACACTGTTTGGGG+AGG | - | chr8.3:15326613-15326632 | MS.gene033078:CDS | 45.0% | |
| CAATCACTTGTGTTAGACCC+CGG | - | chr8.3:15325450-15325469 | MS.gene033078:CDS | 45.0% | |
| CCAAGGACCATGTGTTTGAA+TGG | + | chr8.3:15327217-15327236 | None:intergenic | 45.0% | |
| CCATTCAAACACATGGTCCT+TGG | - | chr8.3:15327214-15327233 | MS.gene033078:intron | 45.0% | |
| CCTCCAACTCTTATCCTCAA+AGG | + | chr8.3:15325744-15325763 | None:intergenic | 45.0% | |
| GACTACAATTATTGCCCCTG+GGG | - | chr8.3:15325342-15325361 | MS.gene033078:CDS | 45.0% | |
| GCCCATACATATTATAGGGC+CGG | + | chr8.3:15327815-15327834 | None:intergenic | 45.0% | |
| GCCGGCCCTATAATATGTAT+GGG | - | chr8.3:15327811-15327830 | MS.gene033078:intron | 45.0% | |
| GTATTGTTACTCCATCCTGC+AGG | + | chr8.3:15328197-15328216 | None:intergenic | 45.0% | |
| GTGACTACAATTATTGCCCC+TGG | - | chr8.3:15325340-15325359 | MS.gene033078:CDS | 45.0% | |
| TACACTTGCCTGTAGTAGTC+AGG | + | chr8.3:15327551-15327570 | None:intergenic | 45.0% | |
| TCAAACACATGGTCCTTGGT+CGG | - | chr8.3:15327218-15327237 | MS.gene033078:intron | 45.0% | |
| TGCCTGTAGTAGTCAGGATT+GGG | + | chr8.3:15327545-15327564 | None:intergenic | 45.0% | |
| TGGACTACCATTCAGCAACA+TGG | + | chr8.3:15328445-15328464 | None:intergenic | 45.0% | |
| TGGCATAAGCTTATGGGGAA+AGG | - | chr8.3:15327893-15327912 | MS.gene033078:CDS | 45.0% | |
| TTCCTACCTCATACAGCACT+CGG | + | chr8.3:15325779-15325798 | None:intergenic | 45.0% | |
| TTGCCTGTAGTAGTCAGGAT+TGG | + | chr8.3:15327546-15327565 | None:intergenic | 45.0% | |
| ! | AGGCCTTTGAGGATAAGAGT+TGG | - | chr8.3:15325738-15325757 | MS.gene033078:intron | 45.0% |
| ! | CCTTTGAGGATAAGAGTTGG+AGG | - | chr8.3:15325741-15325760 | MS.gene033078:intron | 45.0% |
| ! | GACTAATTTTGTGCCTCCCA+TGG | + | chr8.3:15326600-15326619 | None:intergenic | 45.0% |
| ! | TCTACCTTGTTTAAGTGCGC+AGG | + | chr8.3:15327168-15327187 | None:intergenic | 45.0% |
| ! | TTCGTGGCCTTACAATTTCG+AGG | - | chr8.3:15326436-15326455 | MS.gene033078:intron | 45.0% |
| ! | TTGGCTTGAATGCACTCCAT+GGG | - | chr8.3:15326581-15326600 | MS.gene033078:CDS | 45.0% |
| !! | AGTGTTGATGCTGCACAGTA+CGG | - | chr8.3:15326832-15326851 | MS.gene033078:CDS | 45.0% |
| !! | TTTGGCTTGAATGCACTCCA+TGG | - | chr8.3:15326580-15326599 | MS.gene033078:CDS | 45.0% |
| !!! | AAGAGGGCATTTTCTTGGGT+TGG | - | chr8.3:15328345-15328364 | MS.gene033078:intron | 45.0% |
| !!! | ACTTATTTTTAAAAATTATT+AGG | + | chr8.3:15327658-15327677 | None:intergenic | 5.0% |
| !!! | ATTAATGTTATTTAATTTAA+AGG | - | chr8.3:15326378-15326397 | MS.gene033078:intron | 5.0% |
| !!! | TAATAATTTTTAAAAATAAG+TGG | - | chr8.3:15327657-15327676 | MS.gene033078:intron | 5.0% |
| !!! | TTAATGTTATTTAATTTAAA+GGG | - | chr8.3:15326379-15326398 | MS.gene033078:intron | 5.0% |
| AGAACAGATGAAGAGCCCCA+GGG | + | chr8.3:15325360-15325379 | None:intergenic | 50.0% | |
| AGTATAGGGCCAGTACCTAC+CGG | + | chr8.3:15325472-15325491 | None:intergenic | 50.0% | |
| CATATTATAGGGCCGGCCTA+AGG | + | chr8.3:15327808-15327827 | None:intergenic | 50.0% | |
| CCAGGAAGAGAAACAAGGCA+AGG | + | chr8.3:15325191-15325210 | None:intergenic | 50.0% | |
| CCATCACTTATAGCACCAGG+AGG | - | chr8.3:15326916-15326935 | MS.gene033078:CDS | 50.0% | |
| CGGGGTCTAACACAAGTGAT+TGG | + | chr8.3:15325452-15325471 | None:intergenic | 50.0% | |
| CTCCCAATCCTGACTACTAC+AGG | - | chr8.3:15327540-15327559 | MS.gene033078:intron | 50.0% | |
| CTTCTTGAGGTTTCAGGCAC+AGG | - | chr8.3:15326967-15326986 | MS.gene033078:CDS | 50.0% | |
| GGAAGAGAAACAAGGCAAGG+TGG | + | chr8.3:15325188-15325207 | None:intergenic | 50.0% | |
| GGCCGGCCCTATAATATGTA+TGG | - | chr8.3:15327810-15327829 | MS.gene033078:intron | 50.0% | |
| GTCAGGATTGGGAGTGAAAG+TGG | + | chr8.3:15327534-15327553 | None:intergenic | 50.0% | |
| TGATAGCTCTCAGGCCTTTG+AGG | - | chr8.3:15325727-15325746 | MS.gene033078:intron | 50.0% | |
| TGCAGGCAGACCTTAATTGG+AGG | - | chr8.3:15327485-15327504 | MS.gene033078:intron | 50.0% | |
| ! | AAGCTGGAGCATCAAGGTTG+GGG | + | chr8.3:15328572-15328591 | None:intergenic | 50.0% |
| ! | ACAAGCTGGAGCATCAAGGT+TGG | + | chr8.3:15328574-15328593 | None:intergenic | 50.0% |
| ! | CAAGCTGGAGCATCAAGGTT+GGG | + | chr8.3:15328573-15328592 | None:intergenic | 50.0% |
| ! | GCTTTGGTGGCATTACCCTT+AGG | - | chr8.3:15327789-15327808 | MS.gene033078:intron | 50.0% |
| ! | GTGTTGATGCTGCACAGTAC+GGG | - | chr8.3:15326833-15326852 | MS.gene033078:CDS | 50.0% |
| ! | TGCAGGGCCATGATGACTTT+TGG | - | chr8.3:15326562-15326581 | MS.gene033078:CDS | 50.0% |
| !! | CCTCCTGGTGCTATAAGTGA+TGG | + | chr8.3:15326919-15326938 | None:intergenic | 50.0% |
| !! | CCTTGCCTTGTTTCTCTTCC+TGG | - | chr8.3:15325188-15325207 | MS.gene033078:CDS | 50.0% |
| ACACTGTTTGGGGAGGAGAC+TGG | - | chr8.3:15326620-15326639 | MS.gene033078:CDS | 55.0% | |
| CACTTGTGTTAGACCCCGGT+AGG | - | chr8.3:15325454-15325473 | MS.gene033078:CDS | 55.0% | |
| GAACAGATGAAGAGCCCCAG+GGG | + | chr8.3:15325359-15325378 | None:intergenic | 55.0% | |
| GAGAACAGATGAAGAGCCCC+AGG | + | chr8.3:15325361-15325380 | None:intergenic | 55.0% | |
| GCTTGAATGCACTCCATGGG+AGG | - | chr8.3:15326584-15326603 | MS.gene033078:CDS | 55.0% | |
| GGTCTGCCTGCAATAGACCT+TGG | + | chr8.3:15327477-15327496 | None:intergenic | 55.0% | |
| GTATAGGGCCAGTACCTACC+GGG | + | chr8.3:15325471-15325490 | None:intergenic | 55.0% | |
| TATAGGGCCAGTACCTACCG+GGG | + | chr8.3:15325470-15325489 | None:intergenic | 55.0% | |
| TGGTGGCATTACCCTTAGGC+CGG | - | chr8.3:15327793-15327812 | MS.gene033078:intron | 55.0% | |
| TGTTAGACCCCGGTAGGTAC+TGG | - | chr8.3:15325460-15325479 | MS.gene033078:CDS | 55.0% | |
| TGTTAGGGGGCCTAAAGCGA+GGG | - | chr8.3:15327767-15327786 | MS.gene033078:intron | 55.0% | |
| TTGTTAGGGGGCCTAAAGCG+AGG | - | chr8.3:15327766-15327785 | MS.gene033078:intron | 55.0% | |
| ! | GACCGAGTGCTGTATGAGGT+AGG | - | chr8.3:15325774-15325793 | MS.gene033078:intron | 55.0% |
| ! | GCAAGACCGAGTGCTGTATG+AGG | - | chr8.3:15325770-15325789 | MS.gene033078:intron | 55.0% |
| ATGGTCCTTGGTCGGCTGCT+TGG | - | chr8.3:15327226-15327245 | MS.gene033078:intron | 60.0% | |
| GCCACCAAAGCCCTCGCTTT+AGG | + | chr8.3:15327780-15327799 | None:intergenic | 60.0% | |
| TGGTCCTTGGTCGGCTGCTT+GGG | - | chr8.3:15327227-15327246 | MS.gene033078:intron | 60.0% | |
| ! | GCCTAAAGCGAGGGCTTTGG+TGG | - | chr8.3:15327776-15327795 | MS.gene033078:intron | 60.0% |
| !! | CTTGGGTTGGAGAAGCTGGC+GGG | - | chr8.3:15327244-15327263 | MS.gene033078:intron | 60.0% |
| !! | GCTGCTTGGGTTGGAGAAGC+TGG | - | chr8.3:15327240-15327259 | MS.gene033078:intron | 60.0% |
| !! | GCTTGGGTTGGAGAAGCTGG+CGG | - | chr8.3:15327243-15327262 | MS.gene033078:intron | 60.0% |
| !! | TTGGGTTGGAGAAGCTGGCG+GGG | - | chr8.3:15327245-15327264 | MS.gene033078:intron | 60.0% |
| CCAACCCAAGCAGCCGACCA+AGG | + | chr8.3:15327234-15327253 | None:intergenic | 65.0% | |
| CCTTGGTCGGCTGCTTGGGT+TGG | - | chr8.3:15327231-15327250 | MS.gene033078:intron | 65.0% | |
| GGGGCCTAAAGCGAGGGCTT+TGG | - | chr8.3:15327773-15327792 | MS.gene033078:intron | 65.0% | |
| ! | GCTGGCGGGGCATTCAACAG+TGG | - | chr8.3:15327258-15327277 | MS.gene033078:intron | 65.0% |
| ! | GGCGGGGCATTCAACAGTGG+TGG | - | chr8.3:15327261-15327280 | MS.gene033078:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 15325177 | 15328614 | 15325177 | ID=MS.gene033078 |
| chr8.3 | mRNA | 15325177 | 15328614 | 15325177 | ID=MS.gene033078.t1;Parent=MS.gene033078 |
| chr8.3 | exon | 15328405 | 15328614 | 15328405 | ID=MS.gene033078.t1.exon1;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15328405 | 15328614 | 15328405 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15328207 | 15328243 | 15328207 | ID=MS.gene033078.t1.exon2;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15328207 | 15328243 | 15328207 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15327875 | 15328058 | 15327875 | ID=MS.gene033078.t1.exon3;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15327875 | 15328058 | 15327875 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15327076 | 15327224 | 15327076 | ID=MS.gene033078.t1.exon4;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15327076 | 15327224 | 15327076 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15326758 | 15326991 | 15326758 | ID=MS.gene033078.t1.exon5;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15326758 | 15326991 | 15326758 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15326472 | 15326661 | 15326472 | ID=MS.gene033078.t1.exon6;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15326472 | 15326661 | 15326472 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15326230 | 15326355 | 15326230 | ID=MS.gene033078.t1.exon7;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15326230 | 15326355 | 15326230 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15325806 | 15325908 | 15325806 | ID=MS.gene033078.t1.exon8;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15325806 | 15325908 | 15325806 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| chr8.3 | exon | 15325177 | 15325590 | 15325177 | ID=MS.gene033078.t1.exon9;Parent=MS.gene033078.t1 |
| chr8.3 | CDS | 15325177 | 15325590 | 15325177 | ID=cds.MS.gene033078.t1;Parent=MS.gene033078.t1 |
| Gene Sequence |
| Protein sequence |
