Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044430.t1 | XP_013457959.1 | 94.5 | 548 | 30 | 0 | 1 | 548 | 1 | 548 | 0.00E+00 | 1080.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044430.t1 | Q9FF10 | 60.7 | 550 | 200 | 7 | 1 | 542 | 1 | 542 | 1.6e-201 | 703.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044430.t1 | A0A072V1J6 | 94.5 | 548 | 30 | 0 | 1 | 548 | 1 | 548 | 0.0e+00 | 1080.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51808 | MS.gene044430 | PPI |
| MS.gene69310 | MS.gene044430 | PPI |
| MS.gene033078 | MS.gene044430 | PPI |
| MS.gene044430 | MS.gene95198 | PPI |
| MS.gene044430 | MS.gene69310 | PPI |
| MS.gene036682 | MS.gene044430 | PPI |
| MS.gene57996 | MS.gene044430 | PPI |
| MS.gene044430 | MS.gene95196 | PPI |
| MS.gene044430 | MS.gene50879 | PPI |
| MS.gene044430 | MS.gene51808 | PPI |
| MS.gene044430 | MS.gene063475 | PPI |
| MS.gene044430 | MS.gene033803 | PPI |
| MS.gene044430 | MS.gene69866 | PPI |
| MS.gene78493 | MS.gene044430 | PPI |
| MS.gene057928 | MS.gene044430 | PPI |
| MS.gene044430 | MS.gene041370 | PPI |
| MS.gene044430 | MS.gene036317 | PPI |
| MS.gene044430 | MS.gene057926 | PPI |
| MS.gene033803 | MS.gene044430 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044430.t1 | MTR_4g109300 | 94.526 | 548 | 30 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1056 |
| MS.gene044430.t1 | MTR_4g109300 | 89.003 | 582 | 30 | 1 | 1 | 548 | 1 | 582 | 0.0 | 1037 |
| MS.gene044430.t1 | MTR_4g109300 | 95.164 | 517 | 25 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1004 |
| MS.gene044430.t1 | MTR_4g109300 | 94.293 | 403 | 23 | 0 | 146 | 548 | 1 | 403 | 0.0 | 784 |
| MS.gene044430.t1 | MTR_3g023710 | 67.151 | 551 | 147 | 4 | 1 | 547 | 1 | 521 | 0.0 | 766 |
| MS.gene044430.t1 | MTR_3g023700 | 65.636 | 550 | 157 | 3 | 1 | 548 | 1 | 520 | 0.0 | 748 |
| MS.gene044430.t1 | MTR_3g023690 | 65.448 | 547 | 156 | 4 | 1 | 545 | 1 | 516 | 0.0 | 733 |
| MS.gene044430.t1 | MTR_5g043710 | 50.000 | 536 | 228 | 5 | 9 | 542 | 6 | 503 | 0.0 | 541 |
| MS.gene044430.t1 | MTR_3g023690 | 65.509 | 403 | 107 | 3 | 145 | 545 | 56 | 428 | 0.0 | 536 |
| MS.gene044430.t1 | MTR_2g451510 | 47.723 | 549 | 255 | 10 | 3 | 542 | 11 | 536 | 6.40e-174 | 502 |
| MS.gene044430.t1 | MTR_4g116070 | 47.992 | 523 | 234 | 8 | 25 | 542 | 39 | 528 | 8.27e-155 | 453 |
| MS.gene044430.t1 | MTR_4g116040 | 39.459 | 370 | 176 | 7 | 173 | 542 | 21 | 342 | 9.81e-77 | 246 |
| MS.gene044430.t1 | MTR_4g109260 | 71.795 | 78 | 22 | 0 | 227 | 304 | 59 | 136 | 3.29e-34 | 126 |
| MS.gene044430.t1 | MTR_8g091920 | 28.610 | 367 | 137 | 11 | 172 | 518 | 2 | 263 | 7.77e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044430.t1 | AT5G07830 | 60.727 | 550 | 200 | 7 | 1 | 542 | 1 | 542 | 0.0 | 702 |
| MS.gene044430.t1 | AT5G61250 | 60.183 | 545 | 207 | 4 | 1 | 542 | 1 | 538 | 0.0 | 695 |
| MS.gene044430.t1 | AT5G61250 | 60.183 | 545 | 207 | 4 | 1 | 542 | 1 | 538 | 0.0 | 695 |
| MS.gene044430.t1 | AT5G61250 | 60.183 | 545 | 207 | 4 | 1 | 542 | 1 | 538 | 0.0 | 695 |
| MS.gene044430.t1 | AT5G34940 | 46.618 | 547 | 265 | 5 | 5 | 542 | 7 | 535 | 9.48e-171 | 494 |
| MS.gene044430.t1 | AT5G34940 | 49.468 | 376 | 185 | 2 | 5 | 376 | 7 | 381 | 3.99e-128 | 380 |
| MS.gene044430.t1 | AT5G34940 | 46.411 | 418 | 201 | 4 | 130 | 542 | 1 | 400 | 1.79e-123 | 369 |
| MS.gene044430.t1 | AT5G34940 | 45.397 | 315 | 149 | 4 | 233 | 542 | 2 | 298 | 1.22e-86 | 270 |
Find 126 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCCTTGTTTCTCTTCC+TGG | 0.115486 | 8.1:-16290118 | MS.gene044430:CDS |
| CTCTTCATCTGTTCTCAATT+TGG | 0.128874 | 8.1:-16289941 | MS.gene044430:intron |
| CACTCATCATGTATATAATT+TGG | 0.131943 | 8.1:-16288264 | MS.gene044430:CDS |
| TATTGCAGGCAGACCTTAAT+TGG | 0.188717 | 8.1:-16287787 | MS.gene044430:CDS |
| TTGAGTACTGGATCCAATTT+AGG | 0.234555 | 8.1:+16286777 | None:intergenic |
| CCATCATCTGTTAACTTTAG+TGG | 0.237968 | 8.1:+16286807 | None:intergenic |
| GATAAGCTTCTTGAGGTTTC+AGG | 0.238177 | 8.1:-16288308 | MS.gene044430:CDS |
| TGCAGGGCCATGATGACTTT+TGG | 0.268128 | 8.1:-16288707 | MS.gene044430:intron |
| TGATGGAGAAATTCCTAAAT+TGG | 0.268761 | 8.1:-16286790 | MS.gene044430:CDS |
| CAAAATTAGTCACACTGTTT+GGG | 0.269343 | 8.1:-16288660 | MS.gene044430:CDS |
| ACAAAATTAGTCACACTGTT+TGG | 0.287075 | 8.1:-16288661 | MS.gene044430:CDS |
| GCCATAGTTTCCTCCAATTA+AGG | 0.290989 | 8.1:+16287774 | None:intergenic |
| AAGATGAAAGGTGGATTGTT+TGG | 0.303097 | 8.1:-16289441 | MS.gene044430:CDS |
| ACACATTTGTGGATAGCTTT+TGG | 0.308106 | 8.1:-16287971 | MS.gene044430:intron |
| AGCTATCAGATGTCACATTC+AGG | 0.319283 | 8.1:-16286896 | MS.gene044430:CDS |
| ATGGTCCTTGGTCGGCTGCT+TGG | 0.327136 | 8.1:-16288043 | MS.gene044430:CDS |
| GAAATTGATTCATGGGAGTT+TGG | 0.328046 | 8.1:-16288575 | MS.gene044430:intron |
| ATAGACCTTGGTGTTGTATC+TGG | 0.329634 | 8.1:+16287807 | None:intergenic |
| GCTGCTTGGGTTGGAGAAGC+TGG | 0.363644 | 8.1:-16288029 | MS.gene044430:CDS |
| ATGAAATCATAAGCATTTGT+AGG | 0.373227 | 8.1:+16288623 | None:intergenic |
| ACCTTAATTGGAGGAAACTA+TGG | 0.373504 | 8.1:-16287775 | MS.gene044430:CDS |
| TGGTCCTTGGTCGGCTGCTT+GGG | 0.379161 | 8.1:-16288042 | MS.gene044430:CDS |
| ACTCATCATGTATATAATTT+GGG | 0.394197 | 8.1:-16288263 | MS.gene044430:CDS |
| CTTCTTGAGGTTTCAGGCAC+AGG | 0.398220 | 8.1:-16288302 | MS.gene044430:CDS |
| CTTGGGTTGGAGAAGCTGGC+GGG | 0.399312 | 8.1:-16288025 | MS.gene044430:CDS |
| TCATTTGCGCTACTATTGAT+TGG | 0.400129 | 8.1:-16290005 | MS.gene044430:CDS |
| CCAAGGACCATGTGTTTGAA+TGG | 0.403691 | 8.1:+16288055 | None:intergenic |
| TACACTTGCCTGTAGTAGTC+AGG | 0.410999 | 8.1:+16287721 | None:intergenic |
| TGATAGCTCTCAGGCCTTTG+AGG | 0.412095 | 8.1:-16289542 | MS.gene044430:intron |
| ACAATAAATGCAATAGATAA+AGG | 0.415778 | 8.1:+16286726 | None:intergenic |
| CACTGTTTGGGGAGGAGACT+GGG | 0.416439 | 8.1:-16288648 | MS.gene044430:CDS |
| CAAGCTGGAGCATCAAGGTT+GGG | 0.423704 | 8.1:+16286699 | None:intergenic |
| CCTTGGTCGGCTGCTTGGGT+TGG | 0.431850 | 8.1:-16288038 | MS.gene044430:CDS |
| GTCAGGATTGGGAGTGAAAG+TGG | 0.436774 | 8.1:+16287738 | None:intergenic |
| CCACTAAAGTTAACAGATGA+TGG | 0.441916 | 8.1:-16286807 | MS.gene044430:CDS |
| AAGAATACGAAATTGATTCA+TGG | 0.442797 | 8.1:-16288583 | MS.gene044430:CDS |
| ACCAGGAGGTTTCTATCAAA+AGG | 0.447090 | 8.1:-16288339 | MS.gene044430:CDS |
| ACACTGTTTGGGGAGGAGAC+TGG | 0.447803 | 8.1:-16288649 | MS.gene044430:CDS |
| TTGAACTCCGTTCACTTCGA+TGG | 0.456238 | 8.1:+16290053 | None:intergenic |
| GGTAATGAATTGAGTGGTAA+AGG | 0.458190 | 8.1:-16288470 | MS.gene044430:CDS |
| ATCGAAGTGAACGGAGTTCA+AGG | 0.459204 | 8.1:-16290051 | MS.gene044430:CDS |
| CATGTATATAATTTGGGACC+AGG | 0.472337 | 8.1:-16288257 | MS.gene044430:intron |
| TTGCCTGTAGTAGTCAGGAT+TGG | 0.480012 | 8.1:+16287726 | None:intergenic |
| CCATTCAAACACATGGTCCT+TGG | 0.480449 | 8.1:-16288055 | MS.gene044430:CDS |
| ACTTATGCCCATTGTTCAAA+AGG | 0.480564 | 8.1:-16287310 | MS.gene044430:CDS |
| TGAAATCATAAGCATTTGTA+GGG | 0.485591 | 8.1:+16288624 | None:intergenic |
| TGCCTGTAGTAGTCAGGATT+GGG | 0.485923 | 8.1:+16287727 | None:intergenic |
| TGATGTTTCTGACACATTTG+TGG | 0.488382 | 8.1:-16287982 | MS.gene044430:CDS |
| TTACTGTTTCTAAAACAAGC+TGG | 0.489026 | 8.1:+16286684 | None:intergenic |
| CTCCCAATCCTGACTACTAC+AGG | 0.491346 | 8.1:-16287729 | MS.gene044430:intron |
| AGAATACGAAATTGATTCAT+GGG | 0.492373 | 8.1:-16288582 | MS.gene044430:CDS |
| TGTAGGTACTTAGATCAACT+TGG | 0.494140 | 8.1:-16287838 | MS.gene044430:intron |
| GTGACTACAATTATTGCCCC+TGG | 0.494879 | 8.1:-16289966 | MS.gene044430:CDS |
| TGGGATGCTTACACATGAAA+AGG | 0.495260 | 8.1:-16289410 | MS.gene044430:CDS |
| TTTGGCTTGAATGCACTCCA+TGG | 0.503899 | 8.1:-16288689 | MS.gene044430:CDS |
| ACAACACCAAGGTCTATTGC+AGG | 0.505824 | 8.1:-16287801 | MS.gene044430:CDS |
| TTGGCTTGAATGCACTCCAT+GGG | 0.511301 | 8.1:-16288688 | MS.gene044430:CDS |
| GAGGTTTCTATCAAAAGGAA+TGG | 0.511315 | 8.1:-16288334 | MS.gene044430:CDS |
| AGCAAAACCATGTTGCTGAA+TGG | 0.517693 | 8.1:-16286834 | MS.gene044430:CDS |
| TACCTTGTATTGCCTTTGCA+AGG | 0.519151 | 8.1:+16289704 | None:intergenic |
| GTGTTGATGCTGCACAGTAC+GGG | 0.519288 | 8.1:-16288436 | MS.gene044430:CDS |
| ATGGTTACTTGATAGCTCTC+AGG | 0.519664 | 8.1:-16289551 | MS.gene044430:intron |
| GCTTGGGTTGGAGAAGCTGG+CGG | 0.524504 | 8.1:-16288026 | MS.gene044430:CDS |
| TGTATTGCCTTTGCAAGGAT+AGG | 0.525022 | 8.1:+16289709 | None:intergenic |
| TCTACCTTGCTTAAGTGCGC+AGG | 0.525217 | 8.1:+16288104 | None:intergenic |
| GAGAACAGATGAAGAGCCCC+AGG | 0.527394 | 8.1:+16289948 | None:intergenic |
| TTTGCGCTACTATTGATTGG+TGG | 0.527563 | 8.1:-16290002 | MS.gene044430:CDS |
| TGACTACAATTATTGCCCCT+GGG | 0.531853 | 8.1:-16289965 | MS.gene044430:CDS |
| ACAAGCTGGAGCATCAAGGT+TGG | 0.532713 | 8.1:+16286698 | None:intergenic |
| CCTTTGAGGATAAGAGTTGG+AGG | 0.533950 | 8.1:-16289528 | MS.gene044430:CDS |
| CAACAATTTCAAAAGATGAA+AGG | 0.535454 | 8.1:-16289453 | MS.gene044430:CDS |
| GCTATCAGATGTCACATTCA+GGG | 0.537165 | 8.1:-16286895 | MS.gene044430:CDS |
| GAATATACACTATTGAGTAC+TGG | 0.537456 | 8.1:+16286765 | None:intergenic |
| AAGCTGGAGCATCAAGGTTG+GGG | 0.539957 | 8.1:+16286700 | None:intergenic |
| TGCAGGCAGACCTTAATTGG+AGG | 0.544879 | 8.1:-16287784 | MS.gene044430:CDS |
| GCAAGACCGAGTGCTGTATG+AGG | 0.545556 | 8.1:-16289499 | MS.gene044430:CDS |
| ATCCTTGCAAAGGCAATACA+AGG | 0.545859 | 8.1:-16289706 | MS.gene044430:intron |
| TTGGGTTGGAGAAGCTGGCG+GGG | 0.549573 | 8.1:-16288024 | MS.gene044430:CDS |
| TGGCATAAGCTTATGGGGAA+AGG | 0.557644 | 8.1:-16287376 | MS.gene044430:CDS |
| GTCTAATCCTATCCTTGCAA+AGG | 0.563157 | 8.1:-16289716 | MS.gene044430:CDS |
| TAAAACAAGCTGGAGCATCA+AGG | 0.564524 | 8.1:+16286694 | None:intergenic |
| AGTGTTGATGCTGCACAGTA+CGG | 0.569712 | 8.1:-16288437 | MS.gene044430:CDS |
| AAATCAAACGAAGAGAAACC+AGG | 0.578290 | 8.1:+16290100 | None:intergenic |
| GGCGGGGCATTCAACAGTGG+TGG | 0.578982 | 8.1:-16288008 | MS.gene044430:CDS |
| CATTCATTAATCAACTCAAG+AGG | 0.579184 | 8.1:-16286941 | MS.gene044430:CDS |
| CCTCCTGGTGCTATAAGTGA+TGG | 0.580527 | 8.1:+16288353 | None:intergenic |
| TATAAGTGATGGTTTGAACT+TGG | 0.581272 | 8.1:+16288364 | None:intergenic |
| TGAAAGTGGTGACATTAAGA+AGG | 0.582569 | 8.1:+16287752 | None:intergenic |
| AATGAATGAATTATCTATGT+GGG | 0.584815 | 8.1:+16286956 | None:intergenic |
| AGGCCTTTGAGGATAAGAGT+TGG | 0.586029 | 8.1:-16289531 | MS.gene044430:CDS |
| TTCCTACCTCATACAGCACT+CGG | 0.589704 | 8.1:+16289493 | None:intergenic |
| ATTCAAGCCAAAAGTCATCA+TGG | 0.593934 | 8.1:+16288700 | None:intergenic |
| ATTCATTAATCAACTCAAGA+GGG | 0.594118 | 8.1:-16286940 | MS.gene044430:CDS |
| GAATTGAGTGGTAAAGGCAT+CGG | 0.596750 | 8.1:-16288464 | MS.gene044430:CDS |
| AAAATTAGTCACACTGTTTG+GGG | 0.597978 | 8.1:-16288659 | MS.gene044430:CDS |
| CAATTTCAAAAGATGAAAGG+TGG | 0.600121 | 8.1:-16289450 | MS.gene044430:CDS |
| TTGTAGTCACACTTATCTTG+AGG | 0.600422 | 8.1:+16289979 | None:intergenic |
| GCTTGAATGCACTCCATGGG+AGG | 0.602432 | 8.1:-16288685 | MS.gene044430:CDS |
| CATGGTTCCATCGAAGTGAA+CGG | 0.605034 | 8.1:-16290060 | MS.gene044430:CDS |
| CCTCCAACTCTTATCCTCAA+AGG | 0.605128 | 8.1:+16289528 | None:intergenic |
| TGGACTACCATTCAGCAACA+TGG | 0.605541 | 8.1:+16286827 | None:intergenic |
| TCAAACACATGGTCCTTGGT+CGG | 0.613086 | 8.1:-16288051 | MS.gene044430:CDS |
| GGTCTGCCTGCAATAGACCT+TGG | 0.615200 | 8.1:+16287795 | None:intergenic |
| CATATAGGTAATGAATTGAG+TGG | 0.618353 | 8.1:-16288476 | MS.gene044430:intron |
| CCAACCCAAGCAGCCGACCA+AGG | 0.618948 | 8.1:+16288038 | None:intergenic |
| GATGCTTACACATGAAAAGG+TGG | 0.621026 | 8.1:-16289407 | MS.gene044430:CDS |
| ATGGTTTGATAAGCTTCTTG+AGG | 0.622444 | 8.1:-16288315 | MS.gene044430:CDS |
| AGATCCTGCGCACTTAAGCA+AGG | 0.625009 | 8.1:-16288108 | MS.gene044430:CDS |
| GACTACAATTATTGCCCCTG+GGG | 0.626301 | 8.1:-16289964 | MS.gene044430:CDS |
| AGAAACCAGGAAGAGAAACA+AGG | 0.628706 | 8.1:+16290113 | None:intergenic |
| TCAACTCAAGATATTGAACA+TGG | 0.630831 | 8.1:-16290078 | MS.gene044430:CDS |
| TCAGAAACCATTCAAACACA+TGG | 0.631922 | 8.1:-16288062 | MS.gene044430:CDS |
| TAATGAATGAATTATCTATG+TGG | 0.634240 | 8.1:+16286955 | None:intergenic |
| ATTAGTCACACTGTTTGGGG+AGG | 0.644368 | 8.1:-16288656 | MS.gene044430:CDS |
| AAACCATCACTTATAGCACC+AGG | 0.645834 | 8.1:-16288356 | MS.gene044430:CDS |
| GACCGAGTGCTGTATGAGGT+AGG | 0.656808 | 8.1:-16289495 | MS.gene044430:CDS |
| AGAACAGATGAAGAGCCCCA+GGG | 0.657039 | 8.1:+16289949 | None:intergenic |
| GGAAGAGAAACAAGGCAAGG+TGG | 0.665239 | 8.1:+16290121 | None:intergenic |
| CCAGGAAGAGAAACAAGGCA+AGG | 0.670315 | 8.1:+16290118 | None:intergenic |
| CAAATGTGTCAGAAACATCA+CGG | 0.673992 | 8.1:+16287985 | None:intergenic |
| GCTGGCGGGGCATTCAACAG+TGG | 0.677810 | 8.1:-16288011 | MS.gene044430:CDS |
| ATGCTTACACATGAAAAGGT+GGG | 0.687081 | 8.1:-16289406 | MS.gene044430:CDS |
| GAACAGATGAAGAGCCCCAG+GGG | 0.708698 | 8.1:+16289950 | None:intergenic |
| ATCAGATGTCACATTCAGGG+AGG | 0.730151 | 8.1:-16286892 | MS.gene044430:CDS |
| CCATCACTTATAGCACCAGG+AGG | 0.730152 | 8.1:-16288353 | MS.gene044430:CDS |
| AGCATCCAGATACAACACCA+AGG | 0.744343 | 8.1:-16287812 | MS.gene044430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATGTAAAATGA+AGG | - | chr8.1:16289113-16289132 | MS.gene044430:intron | 10.0% |
| !!! | ATGAAAAATAATTTTTTGTT+AGG | - | chr8.1:16289288-16289307 | MS.gene044430:intron | 10.0% |
| !!! | TGAAAAATAATTTTTTGTTA+GGG | - | chr8.1:16289289-16289308 | MS.gene044430:intron | 10.0% |
| !! | CTGAAATTTAAATTAATTGT+AGG | - | chr8.1:16288951-16288970 | MS.gene044430:intron | 15.0% |
| !!! | AAAAATAATTTTTTGTTAGG+GGG | - | chr8.1:16289291-16289310 | MS.gene044430:intron | 15.0% |
| !!! | AAATTGTTGAAGAATTTTAA+GGG | - | chr8.1:16289165-16289184 | MS.gene044430:intron | 15.0% |
| !!! | AATCATTTTTTCAAAAATAG+AGG | - | chr8.1:16287431-16287450 | MS.gene044430:intron | 15.0% |
| !!! | ATCATTTTTTCAAAAATAGA+GGG | - | chr8.1:16287432-16287451 | MS.gene044430:intron | 15.0% |
| !!! | GAAAAATAATTTTTTGTTAG+GGG | - | chr8.1:16289290-16289309 | MS.gene044430:intron | 15.0% |
| !!! | TAAATGATTTGTTTTTGTTT+AGG | - | chr8.1:16288645-16288664 | MS.gene044430:CDS | 15.0% |
| !!! | TAAATTGTTGAAGAATTTTA+AGG | - | chr8.1:16289164-16289183 | MS.gene044430:intron | 15.0% |
| !!! | TTATGCTTTATTTTGTAAAA+AGG | - | chr8.1:16288916-16288935 | MS.gene044430:intron | 15.0% |
| !! | AAGAAATTAAGAATGGTTAT+AGG | + | chr8.1:16289707-16289726 | None:intergenic | 20.0% |
| !! | AATGAATGAATTATCTATGT+GGG | + | chr8.1:16289853-16289872 | None:intergenic | 20.0% |
| !! | ACAAAAAAATGAACACAAAA+TGG | + | chr8.1:16288883-16288902 | None:intergenic | 20.0% |
| !! | ACAATAAATGCAATAGATAA+AGG | + | chr8.1:16290083-16290102 | None:intergenic | 20.0% |
| !! | ACTCATCATGTATATAATTT+GGG | - | chr8.1:16288543-16288562 | MS.gene044430:intron | 20.0% |
| !! | AGAGTTTGAAAAGTTAAATT+AGG | - | chr8.1:16287530-16287549 | MS.gene044430:intron | 20.0% |
| !! | GATAAAATTTGTATGTCAAA+TGG | + | chr8.1:16289601-16289620 | None:intergenic | 20.0% |
| !! | TAATGAATGAATTATCTATG+TGG | + | chr8.1:16289854-16289873 | None:intergenic | 20.0% |
| !! | TGATGTTATTCTTTCAATAA+TGG | - | chr8.1:16287236-16287255 | MS.gene044430:intron | 20.0% |
| !!! | AATTTCGTATTCTTTTGATA+TGG | + | chr8.1:16288217-16288236 | None:intergenic | 20.0% |
| !!! | ATAAATCTAATCCTATGTTT+TGG | - | chr8.1:16289381-16289400 | MS.gene044430:CDS | 20.0% |
| !!! | CATTTTTTTGTGCTAAATTA+AGG | - | chr8.1:16288892-16288911 | MS.gene044430:intron | 20.0% |
| !!! | GTCTTTTTTATTAGAATATG+AGG | - | chr8.1:16289244-16289263 | MS.gene044430:intron | 20.0% |
| !!! | TTTAGTTCTTGAAATTGTAA+AGG | - | chr8.1:16287713-16287732 | MS.gene044430:intron | 20.0% |
| ! | AAAAAATGAACACAAAATGG+TGG | + | chr8.1:16288880-16288899 | None:intergenic | 25.0% |
| ! | AAAGCAAGGTTGAATATAAA+TGG | - | chr8.1:16289222-16289241 | MS.gene044430:intron | 25.0% |
| ! | AAATTAAGAATGGTTATAGG+AGG | + | chr8.1:16289704-16289723 | None:intergenic | 25.0% |
| ! | AACAAATCATTTAAACCTGT+AGG | + | chr8.1:16288638-16288657 | None:intergenic | 25.0% |
| ! | AATGATAACTCAATGTTGAT+TGG | - | chr8.1:16287054-16287073 | MS.gene044430:CDS | 25.0% |
| ! | AATTGCCCATACATATTATA+GGG | + | chr8.1:16289356-16289375 | None:intergenic | 25.0% |
| ! | AGGATGAAAGAAATTAAGAA+TGG | + | chr8.1:16289714-16289733 | None:intergenic | 25.0% |
| ! | ATGAAATCATAAGCATTTGT+AGG | + | chr8.1:16288186-16288205 | None:intergenic | 25.0% |
| ! | ATTCATTAATCAACTCAAGA+GGG | - | chr8.1:16289866-16289885 | MS.gene044430:intron | 25.0% |
| ! | CAAAATCAAATCCAAAACAT+AGG | + | chr8.1:16289395-16289414 | None:intergenic | 25.0% |
| ! | CAACAATTTCAAAAGATGAA+AGG | - | chr8.1:16287353-16287372 | MS.gene044430:CDS | 25.0% |
| ! | CACTCATCATGTATATAATT+TGG | - | chr8.1:16288542-16288561 | MS.gene044430:intron | 25.0% |
| ! | CTTATAACAATATATGCAAG+TGG | - | chr8.1:16288015-16288034 | MS.gene044430:CDS | 25.0% |
| ! | TAAACAGAAACAGTTTCATT+TGG | + | chr8.1:16287661-16287680 | None:intergenic | 25.0% |
| ! | TAAATTAGGTTCTCTTATGT+AGG | - | chr8.1:16287544-16287563 | MS.gene044430:intron | 25.0% |
| ! | TAATTGCCCATACATATTAT+AGG | + | chr8.1:16289357-16289376 | None:intergenic | 25.0% |
| ! | TCTCAATTTGGTTAGTATTT+AGG | - | chr8.1:16286877-16286896 | MS.gene044430:CDS | 25.0% |
| ! | TGAAATCATAAGCATTTGTA+GGG | + | chr8.1:16288185-16288204 | None:intergenic | 25.0% |
| ! | TTATGTCAACTCTATTTCAT+TGG | - | chr8.1:16288285-16288304 | MS.gene044430:CDS | 25.0% |
| ! | TTTACTAGTAGTATCAATCT+TGG | - | chr8.1:16287196-16287215 | MS.gene044430:intron | 25.0% |
| !! | AACTTTTCAAACTCTTACTT+TGG | + | chr8.1:16287525-16287544 | None:intergenic | 25.0% |
| !! | AAGAATACGAAATTGATTCA+TGG | - | chr8.1:16288223-16288242 | MS.gene044430:intron | 25.0% |
| !! | ACATTGTTTCTTAGATCATA+TGG | + | chr8.1:16287153-16287172 | None:intergenic | 25.0% |
| !! | AGAATACGAAATTGATTCAT+GGG | - | chr8.1:16288224-16288243 | MS.gene044430:intron | 25.0% |
| !! | ATTTAGCACCACAATTTTAA+AGG | - | chr8.1:16287809-16287828 | MS.gene044430:CDS | 25.0% |
| !! | ATTTGTTAGAATATTCCTAC+AGG | - | chr8.1:16288620-16288639 | MS.gene044430:CDS | 25.0% |
| !! | TAAAATTGTGGTGCTAAATT+TGG | + | chr8.1:16287808-16287827 | None:intergenic | 25.0% |
| !!! | AGGTGTTTTATTGATTTTGA+TGG | - | chr8.1:16287879-16287898 | MS.gene044430:intron | 25.0% |
| !!! | CTTTCATCTTTTGAAATTGT+TGG | + | chr8.1:16287355-16287374 | None:intergenic | 25.0% |
| !!! | GTTTTATTGATTTTGATGGA+AGG | - | chr8.1:16287883-16287902 | MS.gene044430:intron | 25.0% |
| !!! | TAAAAATGCATTGCTGTTTT+AGG | + | chr8.1:16287180-16287199 | None:intergenic | 25.0% |
| AAAATTAGTCACACTGTTTG+GGG | - | chr8.1:16288147-16288166 | MS.gene044430:intron | 30.0% | |
| AAATTTGAGAGACAATTTCG+TGG | - | chr8.1:16287957-16287976 | MS.gene044430:intron | 30.0% | |
| ACAAAATTAGTCACACTGTT+TGG | - | chr8.1:16288145-16288164 | MS.gene044430:intron | 30.0% | |
| ACTTAGAATTTATCACTTGC+AGG | - | chr8.1:16288082-16288101 | MS.gene044430:CDS | 30.0% | |
| CAAAATTAGTCACACTGTTT+GGG | - | chr8.1:16288146-16288165 | MS.gene044430:intron | 30.0% | |
| CAAGGGATATATACAGTATA+GGG | + | chr8.1:16286986-16287005 | None:intergenic | 30.0% | |
| CAATTTCAAAAGATGAAAGG+TGG | - | chr8.1:16287356-16287375 | MS.gene044430:CDS | 30.0% | |
| CACTCAATTCATTACCTATA+TGG | + | chr8.1:16288332-16288351 | None:intergenic | 30.0% | |
| CATATAGGTAATGAATTGAG+TGG | - | chr8.1:16288330-16288349 | MS.gene044430:CDS | 30.0% | |
| CATTCATTAATCAACTCAAG+AGG | - | chr8.1:16289865-16289884 | MS.gene044430:intron | 30.0% | |
| CTTAGAATTTATCACTTGCA+GGG | - | chr8.1:16288083-16288102 | MS.gene044430:CDS | 30.0% | |
| GAATATACACTATTGAGTAC+TGG | + | chr8.1:16290044-16290063 | None:intergenic | 30.0% | |
| GACTATTAAAGTCAATAAGC+AGG | - | chr8.1:16287859-16287878 | MS.gene044430:intron | 30.0% | |
| TATAAGTGATGGTTTGAACT+TGG | + | chr8.1:16288445-16288464 | None:intergenic | 30.0% | |
| TCAACTCAAGATATTGAACA+TGG | - | chr8.1:16286728-16286747 | MS.gene044430:CDS | 30.0% | |
| TCTGCTATAGTCATTAATAG+AGG | - | chr8.1:16288586-16288605 | MS.gene044430:CDS | 30.0% | |
| TGATGGAGAAATTCCTAAAT+TGG | - | chr8.1:16290016-16290035 | MS.gene044430:CDS | 30.0% | |
| TTGAATTTACCTCAACACAT+TGG | - | chr8.1:16289672-16289691 | MS.gene044430:intron | 30.0% | |
| ! | AGAAGTACATTATGACAATG+AGG | - | chr8.1:16287680-16287699 | MS.gene044430:intron | 30.0% |
| ! | GGATTGTTTGGATTTTCAAT+GGG | - | chr8.1:16287377-16287396 | MS.gene044430:CDS | 30.0% |
| ! | GTGACTAAATTGACTTTAAG+CGG | + | chr8.1:16287781-16287800 | None:intergenic | 30.0% |
| ! | TGGATTGTTTGGATTTTCAA+TGG | - | chr8.1:16287376-16287395 | MS.gene044430:CDS | 30.0% |
| ! | TTTTAGTCCTCGAAATTGTA+AGG | + | chr8.1:16287983-16288002 | None:intergenic | 30.0% |
| !! | ACAGAGAACCTTTAAAATTG+TGG | + | chr8.1:16287820-16287839 | None:intergenic | 30.0% |
| !! | CAACATGGTTTTGCTTTTAA+GGG | + | chr8.1:16289967-16289986 | None:intergenic | 30.0% |
| !! | CAGAAAAATCACTTTTATGC+TGG | - | chr8.1:16288058-16288077 | MS.gene044430:CDS | 30.0% |
| !! | TGTTGAAGAATTTTAAGGGT+CGG | - | chr8.1:16289169-16289188 | MS.gene044430:intron | 30.0% |
| !! | TTACTGTTTCTAAAACAAGC+TGG | + | chr8.1:16290125-16290144 | None:intergenic | 30.0% |
| !! | TTGCTATTTGGCAAACTTAA+AGG | + | chr8.1:16287753-16287772 | None:intergenic | 30.0% |
| !!! | ATCTTTTGAAATTGTTGGCA+AGG | + | chr8.1:16287350-16287369 | None:intergenic | 30.0% |
| !!! | CATTATCTTTTGGTGTTAAG+TGG | + | chr8.1:16289944-16289963 | None:intergenic | 30.0% |
| !!! | CTTTTAAGGGCATTATCTTT+TGG | + | chr8.1:16289954-16289973 | None:intergenic | 30.0% |
| !!! | TCTTTTGAAATTGTTGGCAA+GGG | + | chr8.1:16287349-16287368 | None:intergenic | 30.0% |
| AAACTCTTACTTTGGCAAGA+AGG | + | chr8.1:16287517-16287536 | None:intergenic | 35.0% | |
| AAATCAAACGAAGAGAAACC+AGG | + | chr8.1:16286709-16286728 | None:intergenic | 35.0% | |
| AATAAGTGGAGCTTAAAGCA+AGG | - | chr8.1:16289208-16289227 | MS.gene044430:intron | 35.0% | |
| ACCTTAATTGGAGGAAACTA+TGG | - | chr8.1:16289031-16289050 | MS.gene044430:intron | 35.0% | |
| ACTTATGCCCATTGTTCAAA+AGG | - | chr8.1:16289496-16289515 | MS.gene044430:CDS | 35.0% | |
| AGTTCAAAATGAGAGAATGC+AGG | + | chr8.1:16287011-16287030 | None:intergenic | 35.0% | |
| ATGCTTACACATGAAAAGGT+GGG | - | chr8.1:16287400-16287419 | MS.gene044430:intron | 35.0% | |
| ATGGTTTGATAAGCTTCTTG+AGG | - | chr8.1:16288491-16288510 | MS.gene044430:intron | 35.0% | |
| ATTAGGTTCTCTTATGTAGG+AGG | - | chr8.1:16287547-16287566 | MS.gene044430:intron | 35.0% | |
| ATTCAAGCCAAAAGTCATCA+TGG | + | chr8.1:16288109-16288128 | None:intergenic | 35.0% | |
| CAAATGTGTCAGAAACATCA+CGG | + | chr8.1:16288824-16288843 | None:intergenic | 35.0% | |
| CAGAAAGAACTATGTAAACC+TGG | + | chr8.1:16288570-16288589 | None:intergenic | 35.0% | |
| CCACTAAAGTTAACAGATGA+TGG | - | chr8.1:16289999-16290018 | MS.gene044430:CDS | 35.0% | |
| CCATCATCTGTTAACTTTAG+TGG | + | chr8.1:16290002-16290021 | None:intergenic | 35.0% | |
| CTCTTCATCTGTTCTCAATT+TGG | - | chr8.1:16286865-16286884 | MS.gene044430:CDS | 35.0% | |
| CTTAATTTCTTTCATCCTGC+AGG | - | chr8.1:16289716-16289735 | MS.gene044430:CDS | 35.0% | |
| GAGGTTTCTATCAAAAGGAA+TGG | - | chr8.1:16288472-16288491 | MS.gene044430:CDS | 35.0% | |
| GCAAGGGATATATACAGTAT+AGG | + | chr8.1:16286987-16287006 | None:intergenic | 35.0% | |
| GGTAATGAATTGAGTGGTAA+AGG | - | chr8.1:16288336-16288355 | MS.gene044430:CDS | 35.0% | |
| TCAGAAACCATTCAAACACA+TGG | - | chr8.1:16288744-16288763 | MS.gene044430:intron | 35.0% | |
| TCATTTGCGCTACTATTGAT+TGG | - | chr8.1:16286801-16286820 | MS.gene044430:CDS | 35.0% | |
| TGAAAGTGGTGACATTAAGA+AGG | + | chr8.1:16289057-16289076 | None:intergenic | 35.0% | |
| TGGGCATAAGTTCGTAAAAA+TGG | + | chr8.1:16289487-16289506 | None:intergenic | 35.0% | |
| TGTAGGTACTTAGATCAACT+TGG | - | chr8.1:16288968-16288987 | MS.gene044430:intron | 35.0% | |
| TTAGGTTCTCTTATGTAGGA+GGG | - | chr8.1:16287548-16287567 | MS.gene044430:intron | 35.0% | |
| TTGTAGTCACACTTATCTTG+AGG | + | chr8.1:16286830-16286849 | None:intergenic | 35.0% | |
| ! | AATGAACACAAAATGGTGGA+AGG | + | chr8.1:16288876-16288895 | None:intergenic | 35.0% |
| ! | ACACATTTGTGGATAGCTTT+TGG | - | chr8.1:16288835-16288854 | MS.gene044430:intron | 35.0% |
| ! | ACTTTTGTGGCATAAGCTTA+TGG | - | chr8.1:16289423-16289442 | MS.gene044430:CDS | 35.0% |
| ! | CATGTATATAATTTGGGACC+AGG | - | chr8.1:16288549-16288568 | MS.gene044430:intron | 35.0% |
| ! | CTTTTGTGGCATAAGCTTAT+GGG | - | chr8.1:16289424-16289443 | MS.gene044430:CDS | 35.0% |
| ! | GAAATTGATTCATGGGAGTT+TGG | - | chr8.1:16288231-16288250 | MS.gene044430:intron | 35.0% |
| ! | TACTCTGCCTTTTGAACAAT+GGG | + | chr8.1:16289506-16289525 | None:intergenic | 35.0% |
| ! | TGATGTTTCTGACACATTTG+TGG | - | chr8.1:16288824-16288843 | MS.gene044430:intron | 35.0% |
| ! | TTACTCTGCCTTTTGAACAA+TGG | + | chr8.1:16289507-16289526 | None:intergenic | 35.0% |
| ! | TTTTGTGGCATAAGCTTATG+GGG | - | chr8.1:16289425-16289444 | MS.gene044430:CDS | 35.0% |
| !! | AAGATGAAAGGTGGATTGTT+TGG | - | chr8.1:16287365-16287384 | MS.gene044430:CDS | 35.0% |
| !! | GCAACATGGTTTTGCTTTTA+AGG | + | chr8.1:16289968-16289987 | None:intergenic | 35.0% |
| !! | TTGAGTACTGGATCCAATTT+AGG | + | chr8.1:16290032-16290051 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATTGTTGGCAAG+GGG | + | chr8.1:16287348-16287367 | None:intergenic | 35.0% |
| !!! | GGATAGCTTTTGGTAATGTT+TGG | - | chr8.1:16288845-16288864 | MS.gene044430:intron | 35.0% |
| !!! | TCAATGTTGATTGGCTTTTC+AGG | - | chr8.1:16287063-16287082 | MS.gene044430:CDS | 35.0% |
| !!! | TGCTATCACTTTTTGTAGCT+TGG | - | chr8.1:16287629-16287648 | MS.gene044430:intron | 35.0% |
| AAACCATCACTTATAGCACC+AGG | - | chr8.1:16288450-16288469 | MS.gene044430:CDS | 40.0% | |
| ACCAGGAGGTTTCTATCAAA+AGG | - | chr8.1:16288467-16288486 | MS.gene044430:CDS | 40.0% | |
| AGAAACCAGGAAGAGAAACA+AGG | + | chr8.1:16286696-16286715 | None:intergenic | 40.0% | |
| AGCAAAACCATGTTGCTGAA+TGG | - | chr8.1:16289972-16289991 | MS.gene044430:CDS | 40.0% | |
| AGCTATCAGATGTCACATTC+AGG | - | chr8.1:16289910-16289929 | MS.gene044430:intron | 40.0% | |
| ATCCTTGCAAAGGCAATACA+AGG | - | chr8.1:16287100-16287119 | MS.gene044430:intron | 40.0% | |
| ATTTCTTTCATCCTGCAGGA+TGG | - | chr8.1:16289720-16289739 | MS.gene044430:CDS | 40.0% | |
| CTTTGGCAAGAAGGAAAAAG+AGG | + | chr8.1:16287508-16287527 | None:intergenic | 40.0% | |
| GATAAGCTTCTTGAGGTTTC+AGG | - | chr8.1:16288498-16288517 | MS.gene044430:intron | 40.0% | |
| GATGCTTACACATGAAAAGG+TGG | - | chr8.1:16287399-16287418 | MS.gene044430:intron | 40.0% | |
| GCCATAGTTTCCTCCAATTA+AGG | + | chr8.1:16289035-16289054 | None:intergenic | 40.0% | |
| GCTATCAGATGTCACATTCA+GGG | - | chr8.1:16289911-16289930 | MS.gene044430:intron | 40.0% | |
| GTCTAATCCTATCCTTGCAA+AGG | - | chr8.1:16287090-16287109 | MS.gene044430:intron | 40.0% | |
| TACCTTGTATTGCCTTTGCA+AGG | + | chr8.1:16287105-16287124 | None:intergenic | 40.0% | |
| TATTGCAGGCAGACCTTAAT+TGG | - | chr8.1:16289019-16289038 | MS.gene044430:intron | 40.0% | |
| TGACTACAATTATTGCCCCT+GGG | - | chr8.1:16286841-16286860 | MS.gene044430:CDS | 40.0% | |
| TGGGATGCTTACACATGAAA+AGG | - | chr8.1:16287396-16287415 | MS.gene044430:intron | 40.0% | |
| TGTATTGCCTTTGCAAGGAT+AGG | + | chr8.1:16287100-16287119 | None:intergenic | 40.0% | |
| TTCTTTGCATGCTGCCATAT+AGG | - | chr8.1:16288315-16288334 | MS.gene044430:CDS | 40.0% | |
| ! | ATGGTTACTTGATAGCTCTC+AGG | - | chr8.1:16287255-16287274 | MS.gene044430:intron | 40.0% |
| ! | ATGTCAAATGGTAGTGTGCA+GGG | + | chr8.1:16289589-16289608 | None:intergenic | 40.0% |
| ! | GAATTGAGTGGTAAAGGCAT+CGG | - | chr8.1:16288342-16288361 | MS.gene044430:CDS | 40.0% |
| ! | TAAAACAAGCTGGAGCATCA+AGG | + | chr8.1:16290115-16290134 | None:intergenic | 40.0% |
| ! | TAAGCGGCTAAGTTGCTATT+TGG | + | chr8.1:16287765-16287784 | None:intergenic | 40.0% |
| ! | TATGTCAAATGGTAGTGTGC+AGG | + | chr8.1:16289590-16289609 | None:intergenic | 40.0% |
| ! | TCCTTTTGATAGAAACCTCC+TGG | + | chr8.1:16288471-16288490 | None:intergenic | 40.0% |
| ! | TTTGCGCTACTATTGATTGG+TGG | - | chr8.1:16286804-16286823 | MS.gene044430:CDS | 40.0% |
| ! | TTTTGAGCAGTGCACTTTTG+TGG | - | chr8.1:16289410-16289429 | MS.gene044430:CDS | 40.0% |
| !! | ATAGACCTTGGTGTTGTATC+TGG | + | chr8.1:16289002-16289021 | None:intergenic | 40.0% |
| !!! | AACTCAAGAGGGCATTTTCT+TGG | - | chr8.1:16289877-16289896 | MS.gene044430:intron | 40.0% |
| !!! | ACTCAAGAGGGCATTTTCTT+GGG | - | chr8.1:16289878-16289897 | MS.gene044430:intron | 40.0% |
| AATGAGAGAATGCAGGTGCA+AGG | + | chr8.1:16287004-16287023 | None:intergenic | 45.0% | |
| ACAACACCAAGGTCTATTGC+AGG | - | chr8.1:16289005-16289024 | MS.gene044430:intron | 45.0% | |
| AGCATCCAGATACAACACCA+AGG | - | chr8.1:16288994-16289013 | MS.gene044430:intron | 45.0% | |
| AGGAATGCTCCAATGTGTTG+AGG | + | chr8.1:16289684-16289703 | None:intergenic | 45.0% | |
| ATATTATAGGGCCGGCCTAA+GGG | + | chr8.1:16289344-16289363 | None:intergenic | 45.0% | |
| ATCAGATGTCACATTCAGGG+AGG | - | chr8.1:16289914-16289933 | MS.gene044430:intron | 45.0% | |
| ATCGAAGTGAACGGAGTTCA+AGG | - | chr8.1:16286755-16286774 | MS.gene044430:CDS | 45.0% | |
| ATGAGAGAATGCAGGTGCAA+GGG | + | chr8.1:16287003-16287022 | None:intergenic | 45.0% | |
| ATTAGTCACACTGTTTGGGG+AGG | - | chr8.1:16288150-16288169 | MS.gene044430:intron | 45.0% | |
| CAATCACTTGTGTTAGACCC+CGG | - | chr8.1:16286950-16286969 | MS.gene044430:CDS | 45.0% | |
| CATGGTTCCATCGAAGTGAA+CGG | - | chr8.1:16286746-16286765 | MS.gene044430:CDS | 45.0% | |
| CCAAGGACCATGTGTTTGAA+TGG | + | chr8.1:16288754-16288773 | None:intergenic | 45.0% | |
| CCATTCAAACACATGGTCCT+TGG | - | chr8.1:16288751-16288770 | MS.gene044430:intron | 45.0% | |
| CCTCCAACTCTTATCCTCAA+AGG | + | chr8.1:16287281-16287300 | None:intergenic | 45.0% | |
| GACTACAATTATTGCCCCTG+GGG | - | chr8.1:16286842-16286861 | MS.gene044430:CDS | 45.0% | |
| GCCCATACATATTATAGGGC+CGG | + | chr8.1:16289352-16289371 | None:intergenic | 45.0% | |
| GCCGGCCCTATAATATGTAT+GGG | - | chr8.1:16289348-16289367 | MS.gene044430:intron | 45.0% | |
| GTATTGTTACTCCATCCTGC+AGG | + | chr8.1:16289734-16289753 | None:intergenic | 45.0% | |
| GTGACTACAATTATTGCCCC+TGG | - | chr8.1:16286840-16286859 | MS.gene044430:CDS | 45.0% | |
| TACACTTGCCTGTAGTAGTC+AGG | + | chr8.1:16289088-16289107 | None:intergenic | 45.0% | |
| TCAAACACATGGTCCTTGGT+CGG | - | chr8.1:16288755-16288774 | MS.gene044430:intron | 45.0% | |
| TGCCTGTAGTAGTCAGGATT+GGG | + | chr8.1:16289082-16289101 | None:intergenic | 45.0% | |
| TGGACTACCATTCAGCAACA+TGG | + | chr8.1:16289982-16290001 | None:intergenic | 45.0% | |
| TGGCATAAGCTTATGGGGAA+AGG | - | chr8.1:16289430-16289449 | MS.gene044430:CDS | 45.0% | |
| TTCCTACCTCATACAGCACT+CGG | + | chr8.1:16287316-16287335 | None:intergenic | 45.0% | |
| TTGAACTCCGTTCACTTCGA+TGG | + | chr8.1:16286756-16286775 | None:intergenic | 45.0% | |
| TTGCCTGTAGTAGTCAGGAT+TGG | + | chr8.1:16289083-16289102 | None:intergenic | 45.0% | |
| ! | AGGCCTTTGAGGATAAGAGT+TGG | - | chr8.1:16287275-16287294 | MS.gene044430:intron | 45.0% |
| ! | CCTTTGAGGATAAGAGTTGG+AGG | - | chr8.1:16287278-16287297 | MS.gene044430:intron | 45.0% |
| ! | GACTAATTTTGTGCCTCCCA+TGG | + | chr8.1:16288137-16288156 | None:intergenic | 45.0% |
| ! | TTCGTGGCCTTACAATTTCG+AGG | - | chr8.1:16287973-16287992 | MS.gene044430:CDS | 45.0% |
| ! | TTGGCTTGAATGCACTCCAT+GGG | - | chr8.1:16288118-16288137 | MS.gene044430:CDS | 45.0% |
| !! | AGTGTTGATGCTGCACAGTA+CGG | - | chr8.1:16288369-16288388 | MS.gene044430:CDS | 45.0% |
| !! | TTTGGCTTGAATGCACTCCA+TGG | - | chr8.1:16288117-16288136 | MS.gene044430:CDS | 45.0% |
| !!! | AAGAGGGCATTTTCTTGGGT+TGG | - | chr8.1:16289882-16289901 | MS.gene044430:intron | 45.0% |
| !!! | ACTTATTTTTAAAAATTATT+AGG | + | chr8.1:16289195-16289214 | None:intergenic | 5.0% |
| !!! | ATTAATGTTATTTAATTTAA+AGG | - | chr8.1:16287915-16287934 | MS.gene044430:intron | 5.0% |
| !!! | TAATAATTTTTAAAAATAAG+TGG | - | chr8.1:16289194-16289213 | MS.gene044430:intron | 5.0% |
| !!! | TTAATGTTATTTAATTTAAA+GGG | - | chr8.1:16287916-16287935 | MS.gene044430:intron | 5.0% |
| AGAACAGATGAAGAGCCCCA+GGG | + | chr8.1:16286860-16286879 | None:intergenic | 50.0% | |
| AGATCCTGCGCACTTAAGCA+AGG | - | chr8.1:16288698-16288717 | MS.gene044430:CDS | 50.0% | |
| AGTATAGGGCCAGTACCTAC+CGG | + | chr8.1:16286972-16286991 | None:intergenic | 50.0% | |
| CATATTATAGGGCCGGCCTA+AGG | + | chr8.1:16289345-16289364 | None:intergenic | 50.0% | |
| CCAGGAAGAGAAACAAGGCA+AGG | + | chr8.1:16286691-16286710 | None:intergenic | 50.0% | |
| CCATCACTTATAGCACCAGG+AGG | - | chr8.1:16288453-16288472 | MS.gene044430:CDS | 50.0% | |
| CGGGGTCTAACACAAGTGAT+TGG | + | chr8.1:16286952-16286971 | None:intergenic | 50.0% | |
| CTCCCAATCCTGACTACTAC+AGG | - | chr8.1:16289077-16289096 | MS.gene044430:intron | 50.0% | |
| CTTCTTGAGGTTTCAGGCAC+AGG | - | chr8.1:16288504-16288523 | MS.gene044430:intron | 50.0% | |
| GGAAGAGAAACAAGGCAAGG+TGG | + | chr8.1:16286688-16286707 | None:intergenic | 50.0% | |
| GGCCGGCCCTATAATATGTA+TGG | - | chr8.1:16289347-16289366 | MS.gene044430:intron | 50.0% | |
| GTCAGGATTGGGAGTGAAAG+TGG | + | chr8.1:16289071-16289090 | None:intergenic | 50.0% | |
| TCTACCTTGCTTAAGTGCGC+AGG | + | chr8.1:16288705-16288724 | None:intergenic | 50.0% | |
| TGATAGCTCTCAGGCCTTTG+AGG | - | chr8.1:16287264-16287283 | MS.gene044430:intron | 50.0% | |
| TGCAGGCAGACCTTAATTGG+AGG | - | chr8.1:16289022-16289041 | MS.gene044430:intron | 50.0% | |
| ! | AAGCTGGAGCATCAAGGTTG+GGG | + | chr8.1:16290109-16290128 | None:intergenic | 50.0% |
| ! | ACAAGCTGGAGCATCAAGGT+TGG | + | chr8.1:16290111-16290130 | None:intergenic | 50.0% |
| ! | CAAGCTGGAGCATCAAGGTT+GGG | + | chr8.1:16290110-16290129 | None:intergenic | 50.0% |
| ! | GCTTTGGTGGCATTACCCTT+AGG | - | chr8.1:16289326-16289345 | MS.gene044430:intron | 50.0% |
| ! | GTGTTGATGCTGCACAGTAC+GGG | - | chr8.1:16288370-16288389 | MS.gene044430:CDS | 50.0% |
| ! | TGCAGGGCCATGATGACTTT+TGG | - | chr8.1:16288099-16288118 | MS.gene044430:CDS | 50.0% |
| !! | CCTCCTGGTGCTATAAGTGA+TGG | + | chr8.1:16288456-16288475 | None:intergenic | 50.0% |
| !! | CCTTGCCTTGTTTCTCTTCC+TGG | - | chr8.1:16286688-16286707 | MS.gene044430:CDS | 50.0% |
| ACACTGTTTGGGGAGGAGAC+TGG | - | chr8.1:16288157-16288176 | MS.gene044430:intron | 55.0% | |
| CACTGTTTGGGGAGGAGACT+GGG | - | chr8.1:16288158-16288177 | MS.gene044430:intron | 55.0% | |
| CACTTGTGTTAGACCCCGGT+AGG | - | chr8.1:16286954-16286973 | MS.gene044430:CDS | 55.0% | |
| GAACAGATGAAGAGCCCCAG+GGG | + | chr8.1:16286859-16286878 | None:intergenic | 55.0% | |
| GAGAACAGATGAAGAGCCCC+AGG | + | chr8.1:16286861-16286880 | None:intergenic | 55.0% | |
| GCTTGAATGCACTCCATGGG+AGG | - | chr8.1:16288121-16288140 | MS.gene044430:CDS | 55.0% | |
| GGTCTGCCTGCAATAGACCT+TGG | + | chr8.1:16289014-16289033 | None:intergenic | 55.0% | |
| GTATAGGGCCAGTACCTACC+GGG | + | chr8.1:16286971-16286990 | None:intergenic | 55.0% | |
| TATAGGGCCAGTACCTACCG+GGG | + | chr8.1:16286970-16286989 | None:intergenic | 55.0% | |
| TGGTGGCATTACCCTTAGGC+CGG | - | chr8.1:16289330-16289349 | MS.gene044430:intron | 55.0% | |
| TGTTAGACCCCGGTAGGTAC+TGG | - | chr8.1:16286960-16286979 | MS.gene044430:CDS | 55.0% | |
| TGTTAGGGGGCCTAAAGCGA+GGG | - | chr8.1:16289304-16289323 | MS.gene044430:intron | 55.0% | |
| TTGTTAGGGGGCCTAAAGCG+AGG | - | chr8.1:16289303-16289322 | MS.gene044430:intron | 55.0% | |
| ! | GACCGAGTGCTGTATGAGGT+AGG | - | chr8.1:16287311-16287330 | MS.gene044430:CDS | 55.0% |
| ! | GCAAGACCGAGTGCTGTATG+AGG | - | chr8.1:16287307-16287326 | MS.gene044430:CDS | 55.0% |
| ATGGTCCTTGGTCGGCTGCT+TGG | - | chr8.1:16288763-16288782 | MS.gene044430:intron | 60.0% | |
| GCCACCAAAGCCCTCGCTTT+AGG | + | chr8.1:16289317-16289336 | None:intergenic | 60.0% | |
| TGGTCCTTGGTCGGCTGCTT+GGG | - | chr8.1:16288764-16288783 | MS.gene044430:intron | 60.0% | |
| ! | GCCTAAAGCGAGGGCTTTGG+TGG | - | chr8.1:16289313-16289332 | MS.gene044430:intron | 60.0% |
| !! | CTTGGGTTGGAGAAGCTGGC+GGG | - | chr8.1:16288781-16288800 | MS.gene044430:intron | 60.0% |
| !! | GCTGCTTGGGTTGGAGAAGC+TGG | - | chr8.1:16288777-16288796 | MS.gene044430:intron | 60.0% |
| !! | GCTTGGGTTGGAGAAGCTGG+CGG | - | chr8.1:16288780-16288799 | MS.gene044430:intron | 60.0% |
| !! | TTGGGTTGGAGAAGCTGGCG+GGG | - | chr8.1:16288782-16288801 | MS.gene044430:intron | 60.0% |
| CCAACCCAAGCAGCCGACCA+AGG | + | chr8.1:16288771-16288790 | None:intergenic | 65.0% | |
| CCTTGGTCGGCTGCTTGGGT+TGG | - | chr8.1:16288768-16288787 | MS.gene044430:intron | 65.0% | |
| GGGGCCTAAAGCGAGGGCTT+TGG | - | chr8.1:16289310-16289329 | MS.gene044430:intron | 65.0% | |
| ! | GCTGGCGGGGCATTCAACAG+TGG | - | chr8.1:16288795-16288814 | MS.gene044430:intron | 65.0% |
| ! | GGCGGGGCATTCAACAGTGG+TGG | - | chr8.1:16288798-16288817 | MS.gene044430:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 16286677 | 16290151 | 16286677 | ID=MS.gene044430 |
| chr8.1 | mRNA | 16286677 | 16290151 | 16286677 | ID=MS.gene044430.t1;Parent=MS.gene044430 |
| chr8.1 | exon | 16289942 | 16290151 | 16289942 | ID=MS.gene044430.t1.exon1;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16289942 | 16290151 | 16289942 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16289707 | 16289743 | 16289707 | ID=MS.gene044430.t1.exon2;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16289707 | 16289743 | 16289707 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16289375 | 16289558 | 16289375 | ID=MS.gene044430.t1.exon3;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16289375 | 16289558 | 16289375 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16288576 | 16288724 | 16288576 | ID=MS.gene044430.t1.exon4;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16288576 | 16288724 | 16288576 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16288258 | 16288491 | 16288258 | ID=MS.gene044430.t1.exon5;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16288258 | 16288491 | 16288258 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16287972 | 16288161 | 16287972 | ID=MS.gene044430.t1.exon6;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16287972 | 16288161 | 16287972 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16287730 | 16287855 | 16287730 | ID=MS.gene044430.t1.exon7;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16287730 | 16287855 | 16287730 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16287306 | 16287408 | 16287306 | ID=MS.gene044430.t1.exon8;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16287306 | 16287408 | 16287306 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| chr8.1 | exon | 16286677 | 16287090 | 16286677 | ID=MS.gene044430.t1.exon9;Parent=MS.gene044430.t1 |
| chr8.1 | CDS | 16286677 | 16287090 | 16286677 | ID=cds.MS.gene044430.t1;Parent=MS.gene044430.t1 |
| Gene Sequence |
| Protein sequence |
