Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038285.t1 | XP_003617385.1 | 98 | 490 | 10 | 0 | 2 | 491 | 3 | 492 | 1.20E-252 | 882.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038285.t1 | G7K3B9 | 98.0 | 490 | 10 | 0 | 2 | 491 | 3 | 492 | 8.6e-253 | 882.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene038285 | MS.gene017610 | PPI |
MS.gene67475 | MS.gene038285 | PPI |
MS.gene28870 | MS.gene038285 | PPI |
MS.gene67709 | MS.gene038285 | PPI |
MS.gene67474 | MS.gene038285 | PPI |
MS.gene038285 | MS.gene44220 | PPI |
MS.gene012136 | MS.gene038285 | PPI |
MS.gene038285 | MS.gene59498 | PPI |
MS.gene64799 | MS.gene038285 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038285.t1 | MTR_5g091000 | 97.959 | 490 | 10 | 0 | 2 | 491 | 3 | 492 | 0.0 | 989 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038285.t1 | AT2G30880 | 72.946 | 499 | 125 | 6 | 2 | 491 | 7 | 504 | 0.0 | 669 |
MS.gene038285.t1 | AT2G30880 | 79.733 | 375 | 76 | 0 | 2 | 376 | 7 | 381 | 0.0 | 581 |
Find 108 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGAGGAGCTACAAAATT+TGG | 0.192196 | 5.4:-71772632 | MS.gene038285:CDS |
AAGCTGCTTCCATCAGTTTC+TGG | 0.243919 | 5.4:+71770922 | None:intergenic |
GGGAATGGTTCTACAAAATT+AGG | 0.266451 | 5.4:-71774142 | MS.gene038285:CDS |
GGACCCAACAACTGGGAAAA+TGG | 0.267982 | 5.4:-71775692 | MS.gene038285:CDS |
TGCTGCTGCCTCGGCGGCTT+CGG | 0.275529 | 5.4:+71772546 | None:intergenic |
CCAGAGAGATGCTGCTATTA+AGG | 0.285614 | 5.4:-71772034 | MS.gene038285:CDS |
CGTCAGCTAGCTTCTGCTTC+TGG | 0.300599 | 5.4:-71776501 | MS.gene038285:CDS |
CAACGAATGGAGCGATATTC+AGG | 0.306147 | 5.4:-71770986 | MS.gene038285:CDS |
GGACCATCAGTAGTCCTATT+TGG | 0.315687 | 5.4:+71774013 | None:intergenic |
TTCTGGTAGAAATCTGTTGC+AGG | 0.325130 | 5.4:-71776484 | MS.gene038285:CDS |
AAATATGTGGCGTACTGAAC+TGG | 0.336452 | 5.4:-71772007 | MS.gene038285:CDS |
CTCTTGGAATGATGCCAAAT+AGG | 0.350376 | 5.4:-71774027 | MS.gene038285:CDS |
AGCATCTGCTGCTTATACTA+TGG | 0.357385 | 5.4:-71772527 | MS.gene038285:CDS |
TGTAGAACCATTCCCACTTA+AGG | 0.357415 | 5.4:+71774150 | None:intergenic |
AAAATTTGGCTCGAGACCTT+CGG | 0.369260 | 5.4:-71772618 | MS.gene038285:CDS |
GTGATCTTGGACCCAACAAC+TGG | 0.369582 | 5.4:-71775700 | MS.gene038285:CDS |
TTTGGTGACAGCTGAGGAAA+TGG | 0.377415 | 5.4:-71775735 | MS.gene038285:intron |
AACTTCCTCATTTAGATATC+GGG | 0.385027 | 5.4:-71775207 | MS.gene038285:intron |
TGAAAACACAGAGAATAGTT+TGG | 0.385837 | 5.4:-71776535 | MS.gene038285:CDS |
TCGTGGTGATGATTGATATC+TGG | 0.391348 | 5.4:+71770877 | None:intergenic |
CTCCATTCGTTGTCACCAAC+TGG | 0.392987 | 5.4:+71770997 | None:intergenic |
AAATTTGGCTCGAGACCTTC+GGG | 0.393652 | 5.4:-71772617 | MS.gene038285:CDS |
ATTTCTTTGCGAAATGCTCT+TGG | 0.394738 | 5.4:-71774043 | MS.gene038285:CDS |
GAACGAACGTTGGGTGATCT+TGG | 0.411577 | 5.4:-71775713 | MS.gene038285:CDS |
TAAGAGCGGAAGAGAAGGTC+AGG | 0.418970 | 5.4:-71771942 | MS.gene038285:CDS |
CAATGCTGAAGCTAGGATAA+AGG | 0.428297 | 5.4:-71771908 | MS.gene038285:CDS |
ATAGGAAACACTAAGAGTTA+AGG | 0.432753 | 5.4:-71772653 | MS.gene038285:intron |
AGGCAAGGATAGCCGATGTA+AGG | 0.435309 | 5.4:-71770957 | MS.gene038285:CDS |
CTCCTGGTGCAGCTCGAGCA+TGG | 0.438189 | 5.4:-71775147 | MS.gene038285:CDS |
TCCTGGTGCAGCTCGAGCAT+GGG | 0.444038 | 5.4:-71775146 | MS.gene038285:CDS |
TTCCTATGCGCGGAGACTCC+TGG | 0.453816 | 5.4:-71775163 | MS.gene038285:CDS |
CTGGCTGAATGTTGTTTACC+TGG | 0.455370 | 5.4:+71771016 | None:intergenic |
CCTTAATAGCAGCATCTCTC+TGG | 0.464490 | 5.4:+71772034 | None:intergenic |
AGCAGCAGATGCTGCTGCCT+CGG | 0.468375 | 5.4:+71772537 | None:intergenic |
GTTGTTATCATCAGGGCTGA+TGG | 0.475883 | 5.4:+71770836 | None:intergenic |
CTACATTCTCTGCAGGGATA+GGG | 0.482199 | 5.4:+71771055 | None:intergenic |
AGCCAGTTGGTGACAACGAA+TGG | 0.489395 | 5.4:-71770999 | MS.gene038285:CDS |
CTTTATCCTAGCTTCAGCAT+TGG | 0.489764 | 5.4:+71771909 | None:intergenic |
ACTACATTCTCTGCAGGGAT+AGG | 0.492687 | 5.4:+71771054 | None:intergenic |
GAGGAAATGGAACGAACGTT+GGG | 0.494683 | 5.4:-71775722 | MS.gene038285:CDS |
ATGTGAACTACATTCTCTGC+AGG | 0.496979 | 5.4:+71771048 | None:intergenic |
GGAAAAGTTAATTACAGTCT+CGG | 0.501614 | 5.4:+71776443 | None:intergenic |
TAGGACTACTGATGGTCCTA+TGG | 0.502862 | 5.4:-71774008 | MS.gene038285:CDS |
CATGCTTACTTGAAATTCAC+AGG | 0.510486 | 5.4:+71775483 | None:intergenic |
ACCCATGCTCGAGCTGCACC+AGG | 0.524783 | 5.4:+71775145 | None:intergenic |
GCAGGAGGTGTATGCACAGA+AGG | 0.529056 | 5.4:-71772443 | MS.gene038285:intron |
GTGAATTCCTTAAGTGGGAA+TGG | 0.529448 | 5.4:-71774157 | MS.gene038285:CDS |
AGAATTGTTCCCTTGACAGT+TGG | 0.531526 | 5.4:+71775537 | None:intergenic |
GAAGCTGTGAATTCCTTAAG+TGG | 0.533425 | 5.4:-71774163 | MS.gene038285:CDS |
ATATCTGGCTGGCTAACCAC+TGG | 0.534590 | 5.4:+71770892 | None:intergenic |
AGTGGCAACAAAAGAGAAGC+AGG | 0.535884 | 5.4:-71771866 | MS.gene038285:CDS |
TATCGGGACACCACAGAAGA+AGG | 0.538158 | 5.4:-71775191 | MS.gene038285:CDS |
AAGAAATGAGCCAACTGTCA+AGG | 0.539148 | 5.4:-71775547 | MS.gene038285:CDS |
TGTAGTAAGAGCGGAAGAGA+AGG | 0.540021 | 5.4:-71771947 | MS.gene038285:CDS |
ACATTCCGAGGCTGTTGAGT+TGG | 0.543936 | 5.4:+71774093 | None:intergenic |
GGCAAGGATAGCCGATGTAA+GGG | 0.546348 | 5.4:-71770956 | MS.gene038285:CDS |
ATGATTGTTAAATCATCCAT+AGG | 0.546789 | 5.4:+71773992 | None:intergenic |
AATATGTGGCGTACTGAACT+GGG | 0.547593 | 5.4:-71772006 | MS.gene038285:CDS |
AGAAACTGATGGAAGCAGCT+TGG | 0.549548 | 5.4:-71770920 | MS.gene038285:CDS |
AGTGGGCTACCGAAGTATGA+TGG | 0.552759 | 5.4:-71775341 | MS.gene038285:CDS |
AAAAGATTCTGAGAAGCAGC+AGG | 0.553932 | 5.4:-71772461 | MS.gene038285:CDS |
GTCTCGGATCTCTTAAGAAG+TGG | 0.556862 | 5.4:+71776459 | None:intergenic |
CTGAGGCCAATGCTGAAGCT+AGG | 0.557271 | 5.4:-71771915 | MS.gene038285:CDS |
TGCTAAAAGCACAACTTCAA+AGG | 0.561884 | 5.4:-71771822 | MS.gene038285:intron |
TGCAGCCAACTCAACAGCCT+CGG | 0.564100 | 5.4:-71774098 | MS.gene038285:CDS |
GGTTTGCTCTAGAAACACTT+AGG | 0.566012 | 5.4:+71771076 | None:intergenic |
AGAAATGAGCCAACTGTCAA+GGG | 0.571886 | 5.4:-71775546 | MS.gene038285:CDS |
CACCAGGAGTCTCCGCGCAT+AGG | 0.573977 | 5.4:+71775161 | None:intergenic |
AGCAGATGCTGCTGCCTCGG+CGG | 0.574207 | 5.4:+71772540 | None:intergenic |
GGTGATGATTGATATCTGGC+TGG | 0.579195 | 5.4:+71770881 | None:intergenic |
AGTTCACATGGCAACAGACC+AGG | 0.584699 | 5.4:-71771034 | MS.gene038285:CDS |
GGATGATTTAACAATCATGA+AGG | 0.585369 | 5.4:-71773987 | MS.gene038285:intron |
AAGAGTTTGATCCTTGTTCG+TGG | 0.588496 | 5.4:+71770860 | None:intergenic |
AACACTAAGAGTTAAGGATG+AGG | 0.588499 | 5.4:-71772647 | MS.gene038285:CDS |
TGAGGAAATGGAACGAACGT+TGG | 0.588772 | 5.4:-71775723 | MS.gene038285:CDS |
TCTGGTAGAAATCTGTTGCA+GGG | 0.589058 | 5.4:-71776483 | MS.gene038285:CDS |
AGAAGCAACTGTAGTAAGAG+CGG | 0.589787 | 5.4:-71771956 | MS.gene038285:CDS |
ATGCCAAATAGGACTACTGA+TGG | 0.592713 | 5.4:-71774016 | MS.gene038285:CDS |
GTCGCAGCACCAGAAACTGA+TGG | 0.593220 | 5.4:-71770931 | MS.gene038285:CDS |
TGCAGAGAATGTAGTTCACA+TGG | 0.596449 | 5.4:-71771046 | MS.gene038285:CDS |
AAGCTGTGAATTCCTTAAGT+GGG | 0.598255 | 5.4:-71774162 | MS.gene038285:CDS |
ATCAATCATCACCACGAACA+AGG | 0.599447 | 5.4:-71770871 | MS.gene038285:CDS |
AGCTGTACAGAGAGAATCAG+TGG | 0.602753 | 5.4:-71771884 | MS.gene038285:CDS |
AGGAAATAATCCTTCTTCTG+TGG | 0.603393 | 5.4:+71775181 | None:intergenic |
AATTTCTTTAGAACATTCCG+AGG | 0.603804 | 5.4:+71774081 | None:intergenic |
TCACACCAGTGCCACTCAGT+TGG | 0.610667 | 5.4:-71774203 | MS.gene038285:intron |
TGATCTTGGACCCAACAACT+GGG | 0.611893 | 5.4:-71775699 | MS.gene038285:CDS |
GAAGGATTATTTCCTATGCG+CGG | 0.615384 | 5.4:-71775173 | MS.gene038285:CDS |
CTATTAAGGAGGCAAATATG+TGG | 0.616871 | 5.4:-71772020 | MS.gene038285:CDS |
AGAGAAGGTCAGGGTTGCTG+AGG | 0.616929 | 5.4:-71771932 | MS.gene038285:CDS |
TTCAACTATAACAGAAATAG+CGG | 0.620673 | 5.4:-71772587 | MS.gene038285:CDS |
TAGTTGAATCACGTGCCCGA+AGG | 0.632429 | 5.4:+71772602 | None:intergenic |
TGATCCCACTGAAGAAAATG+TGG | 0.636056 | 5.4:-71771109 | MS.gene038285:CDS |
TGAGACTGCCGAAGCCGCCG+AGG | 0.640696 | 5.4:-71772554 | MS.gene038285:CDS |
ATGCAGCATCCATCATACTT+CGG | 0.643638 | 5.4:+71775332 | None:intergenic |
GTAAACAACATTCAGCCAGT+TGG | 0.644235 | 5.4:-71771012 | MS.gene038285:CDS |
GAGCGATATTCAGGCTACAG+AGG | 0.646570 | 5.4:-71770977 | MS.gene038285:CDS |
AAGAGCGGAAGAGAAGGTCA+GGG | 0.649867 | 5.4:-71771941 | MS.gene038285:CDS |
ATATTCAGGCTACAGAGGCA+AGG | 0.654585 | 5.4:-71770972 | MS.gene038285:CDS |
GAGAGATGCTGCTATTAAGG+AGG | 0.656995 | 5.4:-71772031 | MS.gene038285:CDS |
CTTATACTATGGATGAGCAA+CGG | 0.660420 | 5.4:-71772516 | MS.gene038285:CDS |
AATAGCAGCATCTCTCTGGT+CGG | 0.661298 | 5.4:+71772038 | None:intergenic |
TGTGAACTACATTCTCTGCA+GGG | 0.666902 | 5.4:+71771049 | None:intergenic |
AGATTCTGAGAAGCAGCAGG+AGG | 0.670302 | 5.4:-71772458 | MS.gene038285:CDS |
ATTCACAGGAGATACAGTAA+TGG | 0.674475 | 5.4:+71775497 | None:intergenic |
AAGCAGCTTGGATATTCCAG+TGG | 0.674719 | 5.4:-71770908 | MS.gene038285:CDS |
ATGTTCTAAAGAAATTGAAG+CGG | 0.687851 | 5.4:-71774074 | MS.gene038285:CDS |
TGCTGCGACTTCCCTTACAT+CGG | 0.697961 | 5.4:+71770945 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATATTTTTATAATTTT+CGG | - | chr5.4:71772109-71772128 | MS.gene038285:intron | 0.0% |
!! | AATATAAAAATGACAAAAAA+AGG | + | chr5.4:71772098-71772117 | None:intergenic | 10.0% |
!!! | AATTTATAAGATATTTTTAG+CGG | - | chr5.4:71772394-71772413 | MS.gene038285:intron | 10.0% |
!!! | CAATATATTTTGAAATTAAA+TGG | - | chr5.4:71772344-71772363 | MS.gene038285:intron | 10.0% |
!!! | TATACTAATTTGATTTATTT+CGG | - | chr5.4:71772026-71772045 | MS.gene038285:CDS | 10.0% |
!!! | TGAAAAATTTGTTATTTTTT+TGG | - | chr5.4:71771645-71771664 | MS.gene038285:intron | 10.0% |
!! | AAAAAAACAAACTGAAAAAT+TGG | + | chr5.4:71772770-71772789 | None:intergenic | 15.0% |
!! | AAATCAAATGATAAAAAAAG+TGG | - | chr5.4:71775802-71775821 | MS.gene038285:intron | 15.0% |
!! | ATAGAATAAATAACAATAAG+AGG | + | chr5.4:71773052-71773071 | None:intergenic | 15.0% |
!! | ATTTGAAGATTAATATGAAA+AGG | + | chr5.4:71771046-71771065 | None:intergenic | 15.0% |
!! | CAAAAGAAAAAGAAAATTAA+GGG | - | chr5.4:71774054-71774073 | MS.gene038285:CDS | 15.0% |
!! | TATAATACTAGAGAATTAAA+TGG | - | chr5.4:71776073-71776092 | MS.gene038285:intron | 15.0% |
!! | TTTGAAGATTAATATGAAAA+GGG | + | chr5.4:71771045-71771064 | None:intergenic | 15.0% |
!!! | AATTTTTTTAGGTTTCTTTT+TGG | + | chr5.4:71774186-71774205 | None:intergenic | 15.0% |
!!! | ATATTATTTTTTTGTGTGAA+GGG | - | chr5.4:71771763-71771782 | MS.gene038285:intron | 15.0% |
!!! | ATGAAATTTTTAATTAGACA+AGG | - | chr5.4:71774634-71774653 | MS.gene038285:intron | 15.0% |
!!! | ATTTATAAGATATTTTTAGC+GGG | - | chr5.4:71772395-71772414 | MS.gene038285:intron | 15.0% |
!!! | GTTATATTTTAGTTTTTGAA+AGG | + | chr5.4:71772574-71772593 | None:intergenic | 15.0% |
!!! | GTTATTTTTCTTTGATTTTT+AGG | - | chr5.4:71771823-71771842 | MS.gene038285:CDS | 15.0% |
!!! | TATATTATTTTTTTGTGTGA+AGG | - | chr5.4:71771762-71771781 | MS.gene038285:intron | 15.0% |
!!! | TATTTTTTTTAACTGTTAAC+AGG | - | chr5.4:71776204-71776223 | MS.gene038285:intron | 15.0% |
!!! | TCATGTTTTCAAATTATTAT+CGG | - | chr5.4:71771486-71771505 | MS.gene038285:intron | 15.0% |
!!! | TTTTTTTCTTAGTATATTGT+GGG | - | chr5.4:71774549-71774568 | MS.gene038285:intron | 15.0% |
!! | AACACTTAGAAAATTATTGA+AGG | + | chr5.4:71772936-71772955 | None:intergenic | 20.0% |
!! | AAGACTTCAATTATTATTGA+AGG | + | chr5.4:71773965-71773984 | None:intergenic | 20.0% |
!! | ACTAAAAATTCATATGGATT+AGG | - | chr5.4:71775996-71776015 | MS.gene038285:intron | 20.0% |
!! | ATACACACTAAAAATTCATA+TGG | - | chr5.4:71775990-71776009 | MS.gene038285:intron | 20.0% |
!! | ATTCATAAGAAGATTTGATT+CGG | + | chr5.4:71775689-71775708 | None:intergenic | 20.0% |
!! | CACAATATACTAAGAAAAAA+AGG | + | chr5.4:71774550-71774569 | None:intergenic | 20.0% |
!! | CCAATATGAAATTAAAAACA+AGG | + | chr5.4:71772320-71772339 | None:intergenic | 20.0% |
!! | GCAAAAGAAAAAGAAAATTA+AGG | - | chr5.4:71774053-71774072 | MS.gene038285:CDS | 20.0% |
!! | TTCAGAAAAACACAATAAAT+GGG | - | chr5.4:71773983-71774002 | MS.gene038285:intron | 20.0% |
!! | TTGAAGATTAATATGAAAAG+GGG | + | chr5.4:71771044-71771063 | None:intergenic | 20.0% |
!!! | AACATTCCATAATTTTAAAC+AGG | + | chr5.4:71772896-71772915 | None:intergenic | 20.0% |
!!! | ACATTCCATAATTTTAAACA+GGG | + | chr5.4:71772895-71772914 | None:intergenic | 20.0% |
!!! | CCTTGTTTTTAATTTCATAT+TGG | - | chr5.4:71772317-71772336 | MS.gene038285:intron | 20.0% |
!!! | CTTTTTTTCTTAGTATATTG+TGG | - | chr5.4:71774548-71774567 | MS.gene038285:intron | 20.0% |
!!! | TAAAATTTTCTCTAAAAGCT+TGG | - | chr5.4:71773566-71773585 | MS.gene038285:intron | 20.0% |
!!! | TACAAATTGATCCATTTTAA+TGG | + | chr5.4:71773099-71773118 | None:intergenic | 20.0% |
!!! | TAGATGATACATTAGTTTAT+AGG | + | chr5.4:71775750-71775769 | None:intergenic | 20.0% |
!!! | TTCAACTTTTATTGTGTTAA+TGG | - | chr5.4:71771066-71771085 | MS.gene038285:CDS | 20.0% |
!!! | TTTTTTATACTCACGTTAAT+AGG | - | chr5.4:71772968-71772987 | MS.gene038285:intron | 20.0% |
!!! | TTTTTTCTTAGTATATTGTG+GGG | - | chr5.4:71774550-71774569 | MS.gene038285:intron | 20.0% |
! | AAACAAACTGAAAAATTGGA+CGG | + | chr5.4:71772766-71772785 | None:intergenic | 25.0% |
! | AAACAAGATTGGATATTCAA+AGG | + | chr5.4:71771562-71771581 | None:intergenic | 25.0% |
! | AAACCTTAATGAATGAAAAG+GGG | - | chr5.4:71773874-71773893 | MS.gene038285:intron | 25.0% |
! | AAAGCAATAAAGAACCATAA+AGG | + | chr5.4:71774695-71774714 | None:intergenic | 25.0% |
! | AATTAAATGGAAACTTCAGA+TGG | - | chr5.4:71776086-71776105 | MS.gene038285:intron | 25.0% |
! | AGACAAGGAATATTTGTATA+GGG | - | chr5.4:71774649-71774668 | MS.gene038285:intron | 25.0% |
! | ATGATTGTTAAATCATCCAT+AGG | + | chr5.4:71773409-71773428 | None:intergenic | 25.0% |
! | CAAGAATTTAGTGAAAGTAA+TGG | + | chr5.4:71772840-71772859 | None:intergenic | 25.0% |
! | CTTCAGAAAAACACAATAAA+TGG | - | chr5.4:71773982-71774001 | MS.gene038285:intron | 25.0% |
! | GAAACCTTAATGAATGAAAA+GGG | - | chr5.4:71773873-71773892 | MS.gene038285:intron | 25.0% |
! | GAGTAAAAATAAATCAGACA+AGG | + | chr5.4:71773175-71773194 | None:intergenic | 25.0% |
! | GAGTACGAAGAAAAAATTAT+GGG | - | chr5.4:71775311-71775330 | MS.gene038285:intron | 25.0% |
! | TAACTTCCTCATTTAGATAT+CGG | - | chr5.4:71772190-71772209 | MS.gene038285:intron | 25.0% |
! | TAAGAACATCAAAACAAGAT+TGG | + | chr5.4:71771573-71771592 | None:intergenic | 25.0% |
! | TAGAAGATTAAGCTAAACTA+TGG | + | chr5.4:71773025-71773044 | None:intergenic | 25.0% |
! | TAGACAAGGAATATTTGTAT+AGG | - | chr5.4:71774648-71774667 | MS.gene038285:intron | 25.0% |
! | TGAAACCTTAATGAATGAAA+AGG | - | chr5.4:71773872-71773891 | MS.gene038285:intron | 25.0% |
! | TTCAACTATAACAGAAATAG+CGG | - | chr5.4:71774811-71774830 | MS.gene038285:intron | 25.0% |
! | TTCATAAGAAGATTTGATTC+GGG | + | chr5.4:71775688-71775707 | None:intergenic | 25.0% |
! | TTTATGGTTCTTTATTGCTT+TGG | - | chr5.4:71774694-71774713 | MS.gene038285:intron | 25.0% |
!! | ACAAATTTTTCACATAAGCT+AGG | + | chr5.4:71771637-71771656 | None:intergenic | 25.0% |
!! | TAACATAACCCTATTTTACT+TGG | - | chr5.4:71771950-71771969 | MS.gene038285:CDS | 25.0% |
!! | TATGAATTATGAGTTCGTTT+TGG | - | chr5.4:71776122-71776141 | MS.gene038285:intron | 25.0% |
!! | TTTCTACTCTTTTTCCTTTT+AGG | + | chr5.4:71772458-71772477 | None:intergenic | 25.0% |
!! | TTTTCAAATTATTATCGGTG+TGG | - | chr5.4:71771491-71771510 | MS.gene038285:intron | 25.0% |
!!! | AAAATGCTGTTTTACTCAAT+AGG | - | chr5.4:71774727-71774746 | MS.gene038285:intron | 25.0% |
!!! | AAATTGTTTGTTGTAGCTAA+AGG | - | chr5.4:71775289-71775308 | MS.gene038285:intron | 25.0% |
!!! | AGAAGGTATGCTTTAATTTT+TGG | - | chr5.4:71774972-71774991 | MS.gene038285:intron | 25.0% |
!!! | ATCACACACTCAATTTTTTT+AGG | + | chr5.4:71774197-71774216 | None:intergenic | 25.0% |
!!! | ATGTTCTAAAGAAATTGAAG+CGG | - | chr5.4:71773324-71773343 | MS.gene038285:intron | 25.0% |
!!! | TGAATTGGAATATCGATTTT+CGG | - | chr5.4:71775659-71775678 | MS.gene038285:intron | 25.0% |
!!! | TGGAAAATTTTCTAGCAAAA+AGG | + | chr5.4:71774166-71774185 | None:intergenic | 25.0% |
!!! | TGTTGCTTGTTTTTACTTAA+TGG | + | chr5.4:71775720-71775739 | None:intergenic | 25.0% |
AACTTCCTCATTTAGATATC+GGG | - | chr5.4:71772191-71772210 | MS.gene038285:intron | 30.0% | |
AATAGGTTTCTTCTTGGAAA+GGG | - | chr5.4:71772985-71773004 | MS.gene038285:intron | 30.0% | |
AATTCTTGCTAAAACTCGTA+AGG | - | chr5.4:71772852-71772871 | MS.gene038285:intron | 30.0% | |
AGATAGAACAAACCAAAATG+AGG | + | chr5.4:71773442-71773461 | None:intergenic | 30.0% | |
AGGGAGAAAAAAAAACACAA+AGG | + | chr5.4:71773603-71773622 | None:intergenic | 30.0% | |
ATACAAGCAATGTAGTAACA+AGG | + | chr5.4:71774368-71774387 | None:intergenic | 30.0% | |
ATAGGAAACACTAAGAGTTA+AGG | - | chr5.4:71774745-71774764 | MS.gene038285:intron | 30.0% | |
ATGAAATTAAAAACAAGGCG+AGG | + | chr5.4:71772315-71772334 | None:intergenic | 30.0% | |
ATGAATCATATTAGAACCCA+AGG | + | chr5.4:71771978-71771997 | None:intergenic | 30.0% | |
ATGCACTGAACAAAAGAAAT+AGG | - | chr5.4:71774337-71774356 | MS.gene038285:intron | 30.0% | |
ATTAACAAAGCTTCAAGCAA+GGG | + | chr5.4:71775622-71775641 | None:intergenic | 30.0% | |
ATTTGTATAGGGATGTAGAT+CGG | - | chr5.4:71774660-71774679 | MS.gene038285:intron | 30.0% | |
CAAATGATAAAAAAAGTGGC+TGG | - | chr5.4:71775806-71775825 | MS.gene038285:intron | 30.0% | |
CAACTCTTGAAAAACTGTTT+CGG | - | chr5.4:71775011-71775030 | MS.gene038285:intron | 30.0% | |
CGGTTATCAAAATTGTGAAT+TGG | - | chr5.4:71775644-71775663 | MS.gene038285:intron | 30.0% | |
CTATCAAATAGAGGTTATAG+CGG | - | chr5.4:71775152-71775171 | MS.gene038285:CDS | 30.0% | |
CTCATTATGATTCAACAAAC+CGG | + | chr5.4:71774302-71774321 | None:intergenic | 30.0% | |
GATACACATGTATCATAAGA+TGG | - | chr5.4:71776040-71776059 | MS.gene038285:intron | 30.0% | |
GATAGAACAAACCAAAATGA+GGG | + | chr5.4:71773441-71773460 | None:intergenic | 30.0% | |
GGAAAAGTTAATTACAGTCT+CGG | + | chr5.4:71770958-71770977 | None:intergenic | 30.0% | |
GGAGTACGAAGAAAAAATTA+TGG | - | chr5.4:71775310-71775329 | MS.gene038285:intron | 30.0% | |
GGATGATTTAACAATCATGA+AGG | - | chr5.4:71773411-71773430 | MS.gene038285:intron | 30.0% | |
GGGAGAAAAAAAAACACAAA+GGG | + | chr5.4:71773602-71773621 | None:intergenic | 30.0% | |
GGGATTTATCATAATGAATC+AGG | - | chr5.4:71775918-71775937 | MS.gene038285:intron | 30.0% | |
GGGTCATACAAATCATATAT+TGG | - | chr5.4:71772130-71772149 | MS.gene038285:intron | 30.0% | |
GTACTGAAGGGAAAAATATA+AGG | + | chr5.4:71773519-71773538 | None:intergenic | 30.0% | |
GTTCTTGCTTTCCATTAAAA+TGG | - | chr5.4:71773085-71773104 | MS.gene038285:intron | 30.0% | |
TAACCGCTATTTAACAACAT+TGG | + | chr5.4:71775052-71775071 | None:intergenic | 30.0% | |
TAATAGGTTTCTTCTTGGAA+AGG | - | chr5.4:71772984-71773003 | MS.gene038285:intron | 30.0% | |
TACAAAGTTGACAAAAAACG+TGG | - | chr5.4:71775832-71775851 | MS.gene038285:intron | 30.0% | |
TATTAACAAAGCTTCAAGCA+AGG | + | chr5.4:71775623-71775642 | None:intergenic | 30.0% | |
TATTTAACAACATTGGCCAA+GGG | + | chr5.4:71775045-71775064 | None:intergenic | 30.0% | |
TCATACCTTATACTGTTAGA+AGG | - | chr5.4:71773726-71773745 | MS.gene038285:intron | 30.0% | |
TGAAAACACAGAGAATAGTT+TGG | - | chr5.4:71770863-71770882 | MS.gene038285:CDS | 30.0% | |
TGCAGATTAAGATTGAAACA+CGG | + | chr5.4:71773541-71773560 | None:intergenic | 30.0% | |
TTATTTCGGTGAATTACAGT+GGG | - | chr5.4:71772040-71772059 | MS.gene038285:CDS | 30.0% | |
TTGTAATTCAAATGCGTTGT+GGG | - | chr5.4:71771154-71771173 | MS.gene038285:CDS | 30.0% | |
TTGTAATTCAAATGTGCTGT+GGG | - | chr5.4:71771102-71771121 | MS.gene038285:CDS | 30.0% | |
TTGTTAAATAGCGGTTATAG+TGG | - | chr5.4:71775055-71775074 | MS.gene038285:intron | 30.0% | |
TTTATTTCGGTGAATTACAG+TGG | - | chr5.4:71772039-71772058 | MS.gene038285:CDS | 30.0% | |
TTTGTAATTCAAATGTGCTG+TGG | - | chr5.4:71771101-71771120 | MS.gene038285:CDS | 30.0% | |
! | AACAGTTCAATTTTTCCCTT+CGG | - | chr5.4:71774394-71774413 | MS.gene038285:intron | 30.0% |
! | AGTAATGTTACTTATGCGTA+TGG | - | chr5.4:71772810-71772829 | MS.gene038285:intron | 30.0% |
! | TCATGCCCTGTTTAAAATTA+TGG | - | chr5.4:71772887-71772906 | MS.gene038285:intron | 30.0% |
! | TTATCCACATTTTCTTCAGT+GGG | + | chr5.4:71776296-71776315 | None:intergenic | 30.0% |
! | TTGTCGATTGTGGAAAATAA+TGG | + | chr5.4:71775214-71775233 | None:intergenic | 30.0% |
! | TTTATCCACATTTTCTTCAG+TGG | + | chr5.4:71776297-71776316 | None:intergenic | 30.0% |
!! | AATTTCTTTAGAACATTCCG+AGG | + | chr5.4:71773320-71773339 | None:intergenic | 30.0% |
!! | AGGTATGCTTTAATTTTTGG+CGG | - | chr5.4:71774975-71774994 | MS.gene038285:intron | 30.0% |
!! | GCTTGAAGCTTTGTTAATAA+CGG | - | chr5.4:71775624-71775643 | MS.gene038285:intron | 30.0% |
!! | TTTTCCTTTTAGGAACCTAA+CGG | + | chr5.4:71772448-71772467 | None:intergenic | 30.0% |
AACACTAAGAGTTAAGGATG+AGG | - | chr5.4:71774751-71774770 | MS.gene038285:intron | 35.0% | |
AAGCTGTGAATTCCTTAAGT+GGG | - | chr5.4:71773236-71773255 | MS.gene038285:intron | 35.0% | |
AATGCATTCAGCTTTCATGA+TGG | - | chr5.4:71773475-71773494 | MS.gene038285:intron | 35.0% | |
ACACATCAAGAAGCAACAAA+AGG | + | chr5.4:71773657-71773676 | None:intergenic | 35.0% | |
ACGTTCCTTCTAACAGTATA+AGG | + | chr5.4:71773734-71773753 | None:intergenic | 35.0% | |
AGATGACATGCTTAGTTGTT+TGG | - | chr5.4:71772481-71772500 | MS.gene038285:CDS | 35.0% | |
AGCTAAACTATGGTATTCAG+CGG | + | chr5.4:71773015-71773034 | None:intergenic | 35.0% | |
AGGAAATAATCCTTCTTCTG+TGG | + | chr5.4:71772220-71772239 | None:intergenic | 35.0% | |
AGGGAAAAGTAGTAACACTT+TGG | - | chr5.4:71771782-71771801 | MS.gene038285:intron | 35.0% | |
ATAAGCTAGGTAACATTCGA+GGG | + | chr5.4:71771624-71771643 | None:intergenic | 35.0% | |
ATGAATCACCATCTATCCTT+TGG | + | chr5.4:71775867-71775886 | None:intergenic | 35.0% | |
ATTCAATCGTCTTCATTGAC+TGG | - | chr5.4:71773796-71773815 | MS.gene038285:intron | 35.0% | |
ATTCACAGGAGATACAGTAA+TGG | + | chr5.4:71771904-71771923 | None:intergenic | 35.0% | |
ATTTCTTTGCGAAATGCTCT+TGG | - | chr5.4:71773355-71773374 | MS.gene038285:intron | 35.0% | |
CAAAATATCTCTCTCTCAGA+AGG | + | chr5.4:71772653-71772672 | None:intergenic | 35.0% | |
CACAACGCATTTGAATTACA+AGG | + | chr5.4:71771155-71771174 | None:intergenic | 35.0% | |
CACGTTAATAGGTTTCTTCT+TGG | - | chr5.4:71772979-71772998 | MS.gene038285:intron | 35.0% | |
CATGCTTACTTGAAATTCAC+AGG | + | chr5.4:71771918-71771937 | None:intergenic | 35.0% | |
CTATTAAGGAGGCAAATATG+TGG | - | chr5.4:71775378-71775397 | MS.gene038285:intron | 35.0% | |
CTATTTAACAACATTGGCCA+AGG | + | chr5.4:71775046-71775065 | None:intergenic | 35.0% | |
CTGAAAAATTGGACGGAAAA+AGG | + | chr5.4:71772759-71772778 | None:intergenic | 35.0% | |
CTTATACTATGGATGAGCAA+CGG | - | chr5.4:71774882-71774901 | MS.gene038285:intron | 35.0% | |
CTTGTAATTCAAATGCGTTG+TGG | - | chr5.4:71771153-71771172 | MS.gene038285:CDS | 35.0% | |
GAAAGTAAAGACTAGAGAGA+TGG | + | chr5.4:71773705-71773724 | None:intergenic | 35.0% | |
TATCCAATCAAAGCTAAGCT+TGG | + | chr5.4:71774143-71774162 | None:intergenic | 35.0% | |
TCCAAACCAGACAAAGATAA+GGG | + | chr5.4:71773622-71773641 | None:intergenic | 35.0% | |
TCTTGAATCCTGATTCATTG+TGG | + | chr5.4:71775949-71775968 | None:intergenic | 35.0% | |
TGGCCAATGTTGTTAAATAG+CGG | - | chr5.4:71775046-71775065 | MS.gene038285:intron | 35.0% | |
TGGGAAAATGGAATACAAGT+AGG | - | chr5.4:71771718-71771737 | MS.gene038285:intron | 35.0% | |
TTCAATCACTCTTAGTATCC+TGG | - | chr5.4:71773766-71773785 | MS.gene038285:intron | 35.0% | |
TTCGAGAATAAGGAAGTGAA+GGG | - | chr5.4:71774500-71774519 | MS.gene038285:intron | 35.0% | |
TTTCGAGAATAAGGAAGTGA+AGG | - | chr5.4:71774499-71774518 | MS.gene038285:intron | 35.0% | |
! | ATTCCATTTTCCCAGTTGTT+GGG | + | chr5.4:71771712-71771731 | None:intergenic | 35.0% |
! | CTGTGAATTTCAAGTAAGCA+TGG | - | chr5.4:71771916-71771935 | MS.gene038285:CDS | 35.0% |
! | GAGAGAGAGATATTTTGTGA+GGG | - | chr5.4:71772656-71772675 | MS.gene038285:intron | 35.0% |
! | GATTTGTTCAAATTCCGCTA+CGG | + | chr5.4:71775096-71775115 | None:intergenic | 35.0% |
! | GGGAATGGTTCTACAAAATT+AGG | - | chr5.4:71773256-71773275 | MS.gene038285:intron | 35.0% |
! | GTTCTCTTGTTTCGAGAATA+AGG | - | chr5.4:71774490-71774509 | MS.gene038285:intron | 35.0% |
! | TATTCCATTTTCCCAGTTGT+TGG | + | chr5.4:71771713-71771732 | None:intergenic | 35.0% |
! | TGAGAGAGAGATATTTTGTG+AGG | - | chr5.4:71772655-71772674 | MS.gene038285:intron | 35.0% |
! | TGCTAAAAGCACAACTTCAA+AGG | - | chr5.4:71775576-71775595 | MS.gene038285:intron | 35.0% |
! | TTTTCTCCCTTATCTTTGTC+TGG | - | chr5.4:71773613-71773632 | MS.gene038285:intron | 35.0% |
!! | AAGGGAAAAAAAAGTGTCAC+TGG | - | chr5.4:71774518-71774537 | MS.gene038285:intron | 35.0% |
!! | AGGGAAAAAAAAGTGTCACT+GGG | - | chr5.4:71774519-71774538 | MS.gene038285:intron | 35.0% |
!! | CGGTTTGTTGAATCATAATG+AGG | - | chr5.4:71774300-71774319 | MS.gene038285:intron | 35.0% |
!! | TATCCAAGCTTAGCTTTGAT+TGG | - | chr5.4:71774137-71774156 | MS.gene038285:CDS | 35.0% |
!!! | TATTTTTTTGGTGACAGCTG+AGG | - | chr5.4:71771657-71771676 | MS.gene038285:intron | 35.0% |
AAAAACAAGGCGAGGAAAGT+CGG | + | chr5.4:71772307-71772326 | None:intergenic | 40.0% | |
AAATATGTGGCGTACTGAAC+TGG | - | chr5.4:71775391-71775410 | MS.gene038285:intron | 40.0% | |
AACAAACCAGCGATACAAAG+GGG | + | chr5.4:71774438-71774457 | None:intergenic | 40.0% | |
AACTCCGTTAGGTTCCTAAA+AGG | - | chr5.4:71772441-71772460 | MS.gene038285:intron | 40.0% | |
AAGAAATGAGCCAACTGTCA+AGG | - | chr5.4:71771851-71771870 | MS.gene038285:CDS | 40.0% | |
AAGAGTTTGATCCTTGTTCG+TGG | + | chr5.4:71776541-71776560 | None:intergenic | 40.0% | |
AAGTTGACAAAAAACGTGGC+AGG | - | chr5.4:71775836-71775855 | MS.gene038285:intron | 40.0% | |
AATATCTCTCTCTCAGAAGG+AGG | + | chr5.4:71772650-71772669 | None:intergenic | 40.0% | |
AATATGTGGCGTACTGAACT+GGG | - | chr5.4:71775392-71775411 | MS.gene038285:intron | 40.0% | |
AGAAATGAGCCAACTGTCAA+GGG | - | chr5.4:71771852-71771871 | MS.gene038285:CDS | 40.0% | |
AGAAGCAACTGTAGTAAGAG+CGG | - | chr5.4:71775442-71775461 | MS.gene038285:intron | 40.0% | |
AGAATTGTTCCCTTGACAGT+TGG | + | chr5.4:71771864-71771883 | None:intergenic | 40.0% | |
ATCAATCATCACCACGAACA+AGG | - | chr5.4:71776527-71776546 | MS.gene038285:CDS | 40.0% | |
ATGCAGCATCCATCATACTT+CGG | + | chr5.4:71772069-71772088 | None:intergenic | 40.0% | |
ATGCCAAATAGGACTACTGA+TGG | - | chr5.4:71773382-71773401 | MS.gene038285:intron | 40.0% | |
ATGTGAACTACATTCTCTGC+AGG | + | chr5.4:71776353-71776372 | None:intergenic | 40.0% | |
ATTGACTGGAGGTTTAAGAG+AGG | - | chr5.4:71773810-71773829 | MS.gene038285:intron | 40.0% | |
CAACAAACCAGCGATACAAA+GGG | + | chr5.4:71774439-71774458 | None:intergenic | 40.0% | |
CAATGCATCGAATTGAACAG+TGG | - | chr5.4:71774247-71774266 | MS.gene038285:intron | 40.0% | |
CAATGCTGAAGCTAGGATAA+AGG | - | chr5.4:71775490-71775509 | MS.gene038285:intron | 40.0% | |
CATAAGCTAGGTAACATTCG+AGG | + | chr5.4:71771625-71771644 | None:intergenic | 40.0% | |
CTCTTGGAATGATGCCAAAT+AGG | - | chr5.4:71773371-71773390 | MS.gene038285:intron | 40.0% | |
CTTAATGAATGAAAAGGGGC+CGG | - | chr5.4:71773878-71773897 | MS.gene038285:intron | 40.0% | |
CTTTATCCTAGCTTCAGCAT+TGG | + | chr5.4:71775492-71775511 | None:intergenic | 40.0% | |
GAAGCTGTGAATTCCTTAAG+TGG | - | chr5.4:71773235-71773254 | MS.gene038285:intron | 40.0% | |
GAAGGATTATTTCCTATGCG+CGG | - | chr5.4:71772225-71772244 | MS.gene038285:intron | 40.0% | |
GACATGCTTAGTTGTTTGGT+AGG | - | chr5.4:71772485-71772504 | MS.gene038285:CDS | 40.0% | |
GACGATTGAATTGTTTGTCC+AGG | + | chr5.4:71773787-71773806 | None:intergenic | 40.0% | |
GAGGAAGGAAAAATGCTTTG+TGG | + | chr5.4:71772682-71772701 | None:intergenic | 40.0% | |
GCTAAACTATGGTATTCAGC+GGG | + | chr5.4:71773014-71773033 | None:intergenic | 40.0% | |
GGATGAGGAGCTACAAAATT+TGG | - | chr5.4:71774766-71774785 | MS.gene038285:intron | 40.0% | |
GGTGATTCATCAGAGTGAAT+TGG | - | chr5.4:71775877-71775896 | MS.gene038285:intron | 40.0% | |
GTAAACAACATTCAGCCAGT+TGG | - | chr5.4:71776386-71776405 | MS.gene038285:intron | 40.0% | |
GTCCAAACCAGACAAAGATA+AGG | + | chr5.4:71773623-71773642 | None:intergenic | 40.0% | |
GTGAATTCCTTAAGTGGGAA+TGG | - | chr5.4:71773241-71773260 | MS.gene038285:intron | 40.0% | |
TATACAGTCTCAGGTCTACA+TGG | - | chr5.4:71773903-71773922 | MS.gene038285:intron | 40.0% | |
TCCCTTATCTTTGTCTGGTT+TGG | - | chr5.4:71773618-71773637 | MS.gene038285:intron | 40.0% | |
TCTGGTAGAAATCTGTTGCA+GGG | - | chr5.4:71770915-71770934 | MS.gene038285:CDS | 40.0% | |
TGATCCCACTGAAGAAAATG+TGG | - | chr5.4:71776289-71776308 | MS.gene038285:intron | 40.0% | |
TGCAGAGAATGTAGTTCACA+TGG | - | chr5.4:71776352-71776371 | MS.gene038285:intron | 40.0% | |
TGTAGAACCATTCCCACTTA+AGG | + | chr5.4:71773251-71773270 | None:intergenic | 40.0% | |
TGTATGCCAGCTATGAAATG+TGG | - | chr5.4:71776152-71776171 | MS.gene038285:intron | 40.0% | |
TGTGAACTACATTCTCTGCA+GGG | + | chr5.4:71776352-71776371 | None:intergenic | 40.0% | |
TGTGTTTGGATTGAGGGTTT+AGG | - | chr5.4:71771209-71771228 | MS.gene038285:intron | 40.0% | |
TTAGGGTGTGTTTGGATTGA+GGG | - | chr5.4:71771203-71771222 | MS.gene038285:intron | 40.0% | |
TTCTGGTAGAAATCTGTTGC+AGG | - | chr5.4:71770914-71770933 | MS.gene038285:CDS | 40.0% | |
TTGGTAGGAGAGGAAACATA+TGG | - | chr5.4:71772500-71772519 | MS.gene038285:CDS | 40.0% | |
TTTGGATTGAGGGTTTAGGA+GGG | - | chr5.4:71771213-71771232 | MS.gene038285:intron | 40.0% | |
! | AAAAGATTCTGAGAAGCAGC+AGG | - | chr5.4:71774937-71774956 | MS.gene038285:intron | 40.0% |
! | AAAATTTGGCTCGAGACCTT+CGG | - | chr5.4:71774780-71774799 | MS.gene038285:intron | 40.0% |
! | AGATTGAAACACGGTACTGA+AGG | + | chr5.4:71773532-71773551 | None:intergenic | 40.0% |
! | AGCATCTGCTGCTTATACTA+TGG | - | chr5.4:71774871-71774890 | MS.gene038285:intron | 40.0% |
! | AGCTACATTGTTGTCGATTG+TGG | + | chr5.4:71775224-71775243 | None:intergenic | 40.0% |
! | CCAAGGCACCAAGTAAAATA+GGG | + | chr5.4:71771961-71771980 | None:intergenic | 40.0% |
! | GATTGAAACACGGTACTGAA+GGG | + | chr5.4:71773531-71773550 | None:intergenic | 40.0% |
! | TAGGAACCTAACGGAGTTTT+TGG | + | chr5.4:71772439-71772458 | None:intergenic | 40.0% |
! | TCGTGGTGATGATTGATATC+TGG | + | chr5.4:71776524-71776543 | None:intergenic | 40.0% |
!! | ATGAAGGTACACCCTCATTT+TGG | - | chr5.4:71773427-71773446 | MS.gene038285:intron | 40.0% |
!! | CTACAAACTCTAAAGCCGAA+GGG | + | chr5.4:71774412-71774431 | None:intergenic | 40.0% |
!! | GGTTTGCTCTAGAAACACTT+AGG | + | chr5.4:71776325-71776344 | None:intergenic | 40.0% |
!! | TCTACAAACTCTAAAGCCGA+AGG | + | chr5.4:71774413-71774432 | None:intergenic | 40.0% |
!! | TTCGGCTTTAGAGTTTGTAG+AGG | - | chr5.4:71774412-71774431 | MS.gene038285:intron | 40.0% |
!!! | AGCTTTTAGAACCAACTGAG+TGG | + | chr5.4:71773209-71773228 | None:intergenic | 40.0% |
!!! | CCTATTTTACTTGGTGCCTT+GGG | - | chr5.4:71771959-71771978 | MS.gene038285:CDS | 40.0% |
AAAACAAGGCGAGGAAAGTC+GGG | + | chr5.4:71772306-71772325 | None:intergenic | 45.0% | |
AACCGGATTCAGCCATAATG+TGG | + | chr5.4:71774285-71774304 | None:intergenic | 45.0% | |
AAGCAGCTTGGATATTCCAG+TGG | - | chr5.4:71776490-71776509 | MS.gene038285:CDS | 45.0% | |
AAGCTGCTTCCATCAGTTTC+TGG | + | chr5.4:71776479-71776498 | None:intergenic | 45.0% | |
AATAGCAGCATCTCTCTGGT+CGG | + | chr5.4:71775363-71775382 | None:intergenic | 45.0% | |
ACTACATTCTCTGCAGGGAT+AGG | + | chr5.4:71776347-71776366 | None:intergenic | 45.0% | |
AGAAACTGATGGAAGCAGCT+TGG | - | chr5.4:71776478-71776497 | MS.gene038285:CDS | 45.0% | |
AGACCTGAGACTGTATATGC+CGG | + | chr5.4:71773900-71773919 | None:intergenic | 45.0% | |
AGCTGTACAGAGAGAATCAG+TGG | - | chr5.4:71775514-71775533 | MS.gene038285:CDS | 45.0% | |
AGGATCGACCACAATGAATC+AGG | - | chr5.4:71775938-71775957 | MS.gene038285:intron | 45.0% | |
AGGCTACACCAAAGGATAGA+TGG | - | chr5.4:71775856-71775875 | MS.gene038285:intron | 45.0% | |
AGGGATGTAGATCGGTATCT+TGG | - | chr5.4:71774668-71774687 | MS.gene038285:intron | 45.0% | |
AGTGGCAACAAAAGAGAAGC+AGG | - | chr5.4:71775532-71775551 | MS.gene038285:CDS | 45.0% | |
ATATTCAGGCTACAGAGGCA+AGG | - | chr5.4:71776426-71776445 | MS.gene038285:intron | 45.0% | |
ATCGAATTGAACAGTGGCTG+TGG | - | chr5.4:71774253-71774272 | MS.gene038285:intron | 45.0% | |
ATCGGTATCTTGGGCCTTTA+TGG | - | chr5.4:71774678-71774697 | MS.gene038285:intron | 45.0% | |
ATTGTGGGGCTTGAATCTAG+TGG | - | chr5.4:71774564-71774583 | MS.gene038285:intron | 45.0% | |
CAACGAATGGAGCGATATTC+AGG | - | chr5.4:71776412-71776431 | MS.gene038285:intron | 45.0% | |
CCAACAAACCAGCGATACAA+AGG | + | chr5.4:71774440-71774459 | None:intergenic | 45.0% | |
CCAGAGAGATGCTGCTATTA+AGG | - | chr5.4:71775364-71775383 | MS.gene038285:intron | 45.0% | |
CCTTAATAGCAGCATCTCTC+TGG | + | chr5.4:71775367-71775386 | None:intergenic | 45.0% | |
CGAAAAACTCCTCCGTCATT+TGG | + | chr5.4:71772723-71772742 | None:intergenic | 45.0% | |
CTACATTCTCTGCAGGGATA+GGG | + | chr5.4:71776346-71776365 | None:intergenic | 45.0% | |
CTCTGACCTTCATACACTTC+TGG | - | chr5.4:71774462-71774481 | MS.gene038285:intron | 45.0% | |
CTTAGGGTGTGTTTGGATTG+AGG | - | chr5.4:71771202-71771221 | MS.gene038285:intron | 45.0% | |
CTTGAGCCAAAAACTCCGTT+AGG | - | chr5.4:71772430-71772449 | MS.gene038285:intron | 45.0% | |
GAGAGATGCTGCTATTAAGG+AGG | - | chr5.4:71775367-71775386 | MS.gene038285:intron | 45.0% | |
GAGGAAATGGAACGAACGTT+GGG | - | chr5.4:71771676-71771695 | MS.gene038285:intron | 45.0% | |
GATGCTCCACATTTCATAGC+TGG | + | chr5.4:71776161-71776180 | None:intergenic | 45.0% | |
GCTTAGTTGTTTGGTAGGAG+AGG | - | chr5.4:71772490-71772509 | MS.gene038285:CDS | 45.0% | |
GGACCATCAGTAGTCCTATT+TGG | + | chr5.4:71773388-71773407 | None:intergenic | 45.0% | |
GGGATGTAGATCGGTATCTT+GGG | - | chr5.4:71774669-71774688 | MS.gene038285:intron | 45.0% | |
GGTGATGATTGATATCTGGC+TGG | + | chr5.4:71776520-71776539 | None:intergenic | 45.0% | |
GGTGTCCCGATATCTAAATG+AGG | + | chr5.4:71772199-71772218 | None:intergenic | 45.0% | |
GGTTTAAGAGAGGCAAGGAT+AGG | - | chr5.4:71773820-71773839 | MS.gene038285:intron | 45.0% | |
GTCCACATTATGGCTGAATC+CGG | - | chr5.4:71774280-71774299 | MS.gene038285:intron | 45.0% | |
GTCTCGGATCTCTTAAGAAG+TGG | + | chr5.4:71770942-71770961 | None:intergenic | 45.0% | |
GTTTGGATTGAGGGTTTAGG+AGG | - | chr5.4:71771212-71771231 | MS.gene038285:intron | 45.0% | |
TAGGACTACTGATGGTCCTA+TGG | - | chr5.4:71773390-71773409 | MS.gene038285:intron | 45.0% | |
TCCAAACACACCCTAAGTGT+CGG | + | chr5.4:71771199-71771218 | None:intergenic | 45.0% | |
TGAGGAAATGGAACGAACGT+TGG | - | chr5.4:71771675-71771694 | MS.gene038285:intron | 45.0% | |
TGATCTTGGACCCAACAACT+GGG | - | chr5.4:71771699-71771718 | MS.gene038285:intron | 45.0% | |
TGGACTCGATCGTAGTGTAT+CGG | - | chr5.4:71775897-71775916 | MS.gene038285:intron | 45.0% | |
TGTAGTAAGAGCGGAAGAGA+AGG | - | chr5.4:71775451-71775470 | MS.gene038285:intron | 45.0% | |
TGTTTCGGATGAATGACCCT+TGG | - | chr5.4:71775026-71775045 | MS.gene038285:intron | 45.0% | |
TTGGATTGAGGGTTTAGGAG+GGG | - | chr5.4:71771214-71771233 | MS.gene038285:intron | 45.0% | |
! | AAATTTGGCTCGAGACCTTC+GGG | - | chr5.4:71774781-71774800 | MS.gene038285:intron | 45.0% |
! | AGCTTTCATGATGGTGATGC+AGG | - | chr5.4:71773484-71773503 | MS.gene038285:intron | 45.0% |
! | CAATCGTCTTCATTGACTGG+AGG | - | chr5.4:71773799-71773818 | MS.gene038285:intron | 45.0% |
! | CCCAAGGCACCAAGTAAAAT+AGG | + | chr5.4:71771962-71771981 | None:intergenic | 45.0% |
! | CGCAAACCAGAAGTGTATGA+AGG | + | chr5.4:71774471-71774490 | None:intergenic | 45.0% |
! | CGGCCCCTTTTCATTCATTA+AGG | + | chr5.4:71773880-71773899 | None:intergenic | 45.0% |
! | CTGGCTGAATGTTGTTTACC+TGG | + | chr5.4:71776385-71776404 | None:intergenic | 45.0% |
! | GCTTTCATGATGGTGATGCA+GGG | - | chr5.4:71773485-71773504 | MS.gene038285:intron | 45.0% |
! | TTTGGTGACAGCTGAGGAAA+TGG | - | chr5.4:71771663-71771682 | MS.gene038285:intron | 45.0% |
!! | ATGAAGCACCGACACAAACA+GGG | + | chr5.4:71771529-71771548 | None:intergenic | 45.0% |
!! | CCTTTGTATCGCTGGTTTGT+TGG | - | chr5.4:71774437-71774456 | MS.gene038285:intron | 45.0% |
!! | TATGAAGCACCGACACAAAC+AGG | + | chr5.4:71771530-71771549 | None:intergenic | 45.0% |
!! | TTGTCTGGTTTGGACTTTGC+TGG | - | chr5.4:71773628-71773647 | MS.gene038285:intron | 45.0% |
!!! | CCCTATTTTACTTGGTGCCT+TGG | - | chr5.4:71771958-71771977 | MS.gene038285:CDS | 45.0% |
!! | ATTAATAAAAAAAAAAAAAG+AGG | + | chr5.4:71770979-71770998 | None:intergenic | 5.0% |
!!! | TTTATATTTTTATAATTTTC+GGG | - | chr5.4:71772110-71772129 | MS.gene038285:intron | 5.0% |
!!! | TTTTTTTAAAATAAATTAAG+TGG | - | chr5.4:71771289-71771308 | MS.gene038285:intron | 5.0% |
AAACAAGGCGAGGAAAGTCG+GGG | + | chr5.4:71772305-71772324 | None:intergenic | 50.0% | |
AAGAGCGGAAGAGAAGGTCA+GGG | - | chr5.4:71775457-71775476 | MS.gene038285:intron | 50.0% | |
ACATTCCGAGGCTGTTGAGT+TGG | + | chr5.4:71773308-71773327 | None:intergenic | 50.0% | |
ACCGACACTTAGGGTGTGTT+TGG | - | chr5.4:71771195-71771214 | MS.gene038285:intron | 50.0% | |
ACTAGGGTTTAGGAGGGGAA+GGG | + | chr5.4:71771416-71771435 | None:intergenic | 50.0% | |
AGGCAAGGATAGCCGATGTA+AGG | - | chr5.4:71776441-71776460 | MS.gene038285:intron | 50.0% | |
AGGTCTACATGGTAGCAGCT+AGG | - | chr5.4:71773914-71773933 | MS.gene038285:intron | 50.0% | |
AGTTCACATGGCAACAGACC+AGG | - | chr5.4:71776364-71776383 | MS.gene038285:intron | 50.0% | |
ATGTGTCGCACACAAAGTGC+CGG | + | chr5.4:71771457-71771476 | None:intergenic | 50.0% | |
ATTGAACAGTGGCTGTGGCA+AGG | - | chr5.4:71774258-71774277 | MS.gene038285:intron | 50.0% | |
ATTGAGGGTTTAGGAGGGGA+AGG | - | chr5.4:71771218-71771237 | MS.gene038285:intron | 50.0% | |
CAACTTCAAAGGTCAGCGTC+TGG | - | chr5.4:71775587-71775606 | MS.gene038285:intron | 50.0% | |
CTCCATTCGTTGTCACCAAC+TGG | + | chr5.4:71776404-71776423 | None:intergenic | 50.0% | |
CTGACATGTGTCGGACACTA+GGG | + | chr5.4:71771432-71771451 | None:intergenic | 50.0% | |
CTGGAGGTTTAAGAGAGGCA+AGG | - | chr5.4:71773815-71773834 | MS.gene038285:intron | 50.0% | |
CTGTGGCAAGGTCCACATTA+TGG | - | chr5.4:71774270-71774289 | MS.gene038285:intron | 50.0% | |
GAACGAACGTTGGGTGATCT+TGG | - | chr5.4:71771685-71771704 | MS.gene038285:intron | 50.0% | |
GAGCGATATTCAGGCTACAG+AGG | - | chr5.4:71776421-71776440 | MS.gene038285:intron | 50.0% | |
GCTATAGCGCTTTACCGTAG+CGG | - | chr5.4:71775079-71775098 | MS.gene038285:intron | 50.0% | |
GGACCCAACAACTGGGAAAA+TGG | - | chr5.4:71771706-71771725 | MS.gene038285:intron | 50.0% | |
GGACTCGATCGTAGTGTATC+GGG | - | chr5.4:71775898-71775917 | MS.gene038285:intron | 50.0% | |
GGCAAGGATAGCCGATGTAA+GGG | - | chr5.4:71776442-71776461 | MS.gene038285:intron | 50.0% | |
GGGCTTGAATCTAGTGGCAA+AGG | - | chr5.4:71774570-71774589 | MS.gene038285:intron | 50.0% | |
GTGATCTTGGACCCAACAAC+TGG | - | chr5.4:71771698-71771717 | MS.gene038285:intron | 50.0% | |
GTTAGCGTCCCTGTTTGTGT+CGG | - | chr5.4:71771518-71771537 | MS.gene038285:intron | 50.0% | |
TAAGAGCGGAAGAGAAGGTC+AGG | - | chr5.4:71775456-71775475 | MS.gene038285:intron | 50.0% | |
TAGAACCAACTGAGTGGCAC+TGG | + | chr5.4:71773203-71773222 | None:intergenic | 50.0% | |
TAGTTGAATCACGTGCCCGA+AGG | + | chr5.4:71774799-71774818 | None:intergenic | 50.0% | |
TATCGGGACACCACAGAAGA+AGG | - | chr5.4:71772207-71772226 | MS.gene038285:intron | 50.0% | |
TCCTTCCTCGCTCACTGTTA+CGG | - | chr5.4:71772693-71772712 | MS.gene038285:intron | 50.0% | |
TCGGACACTAGGGTTTAGGA+GGG | + | chr5.4:71771422-71771441 | None:intergenic | 50.0% | |
TGCTGCGACTTCCCTTACAT+CGG | + | chr5.4:71776456-71776475 | None:intergenic | 50.0% | |
TGTGTCGGACACTAGGGTTT+AGG | + | chr5.4:71771426-71771445 | None:intergenic | 50.0% | |
TGTTACGGGACGCCAAATGA+CGG | - | chr5.4:71772708-71772727 | MS.gene038285:intron | 50.0% | |
TTGAGGGTTTAGGAGGGGAA+GGG | - | chr5.4:71771219-71771238 | MS.gene038285:intron | 50.0% | |
! | AGATTCTGAGAAGCAGCAGG+AGG | - | chr5.4:71774940-71774959 | MS.gene038285:intron | 50.0% |
! | ATATCTGGCTGGCTAACCAC+TGG | + | chr5.4:71776509-71776528 | None:intergenic | 50.0% |
!! | AGCCAGTTGGTGACAACGAA+TGG | - | chr5.4:71776399-71776418 | MS.gene038285:intron | 50.0% |
!! | AGTGGGCTACCGAAGTATGA+TGG | - | chr5.4:71772057-71772076 | MS.gene038285:CDS | 50.0% |
!! | CTCTGAAGCACCGACACTTA+GGG | - | chr5.4:71771186-71771205 | MS.gene038285:intron | 50.0% |
!! | TCTCTGAAGCACCGACACTT+AGG | - | chr5.4:71771185-71771204 | MS.gene038285:intron | 50.0% |
AACGTGGCAGGCTACACCAA+AGG | - | chr5.4:71775848-71775867 | MS.gene038285:intron | 55.0% | |
AGAGAAGGTCAGGGTTGCTG+AGG | - | chr5.4:71775466-71775485 | MS.gene038285:intron | 55.0% | |
CACTAGGGTTTAGGAGGGGA+AGG | + | chr5.4:71771417-71771436 | None:intergenic | 55.0% | |
CCTTCCTCGCTCACTGTTAC+GGG | - | chr5.4:71772694-71772713 | MS.gene038285:intron | 55.0% | |
CGGACACTAGGGTTTAGGAG+GGG | + | chr5.4:71771421-71771440 | None:intergenic | 55.0% | |
CTGAGGCCAATGCTGAAGCT+AGG | - | chr5.4:71775483-71775502 | MS.gene038285:intron | 55.0% | |
GCTGACATGTGTCGGACACT+AGG | + | chr5.4:71771433-71771452 | None:intergenic | 55.0% | |
GTCGCAGCACCAGAAACTGA+TGG | - | chr5.4:71776467-71776486 | MS.gene038285:CDS | 55.0% | |
GTCGGACACTAGGGTTTAGG+AGG | + | chr5.4:71771423-71771442 | None:intergenic | 55.0% | |
TAGAGGCCCCTTTGTATCGC+TGG | - | chr5.4:71774429-71774448 | MS.gene038285:intron | 55.0% | |
TGCAGCCAACTCAACAGCCT+CGG | - | chr5.4:71773300-71773319 | MS.gene038285:intron | 55.0% | |
TGTCCGACACATGTCAGCAC+CGG | - | chr5.4:71771435-71771454 | MS.gene038285:intron | 55.0% | |
! | CGTCAGCTAGCTTCTGCTTC+TGG | - | chr5.4:71770897-71770916 | MS.gene038285:CDS | 55.0% |
! | GCAGGAGGTGTATGCACAGA+AGG | - | chr5.4:71774955-71774974 | MS.gene038285:intron | 55.0% |
! | TCACACCAGTGCCACTCAGT+TGG | - | chr5.4:71773195-71773214 | MS.gene038285:intron | 55.0% |
AGCAGCAGATGCTGCTGCCT+CGG | + | chr5.4:71774864-71774883 | None:intergenic | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | - | chr5.4:71771222-71771241 | MS.gene038285:intron | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | + | chr5.4:71771241-71771222 | None:intergenic | 60.0% | |
CCCGTAACAGTGAGCGAGGA+AGG | + | chr5.4:71772697-71772716 | None:intergenic | 60.0% | |
GGGCCGGCATATACAGTCTC+AGG | - | chr5.4:71773894-71773913 | MS.gene038285:intron | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | - | chr5.4:71771223-71771242 | MS.gene038285:intron | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | + | chr5.4:71771242-71771223 | None:intergenic | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | - | chr5.4:71771224-71771243 | MS.gene038285:intron | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | + | chr5.4:71771243-71771224 | None:intergenic | 60.0% | |
TACGGGACGCCAAATGACGG+AGG | - | chr5.4:71772711-71772730 | MS.gene038285:intron | 60.0% | |
TCCTGGTGCAGCTCGAGCAT+GGG | - | chr5.4:71772252-71772271 | MS.gene038285:intron | 60.0% | |
TTCCTATGCGCGGAGACTCC+TGG | - | chr5.4:71772235-71772254 | MS.gene038285:intron | 60.0% | |
!! | GTGCCGGTGCTGACATGTGT+CGG | + | chr5.4:71771441-71771460 | None:intergenic | 60.0% |
ACCCATGCTCGAGCTGCACC+AGG | + | chr5.4:71772256-71772275 | None:intergenic | 65.0% | |
AGCAGATGCTGCTGCCTCGG+CGG | + | chr5.4:71774861-71774880 | None:intergenic | 65.0% | |
CACCAGGAGTCTCCGCGCAT+AGG | + | chr5.4:71772240-71772259 | None:intergenic | 65.0% | |
CTCCTGGTGCAGCTCGAGCA+TGG | - | chr5.4:71772251-71772270 | MS.gene038285:intron | 65.0% | |
GCGTCCCGTAACAGTGAGCG+AGG | + | chr5.4:71772701-71772720 | None:intergenic | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | - | chr5.4:71771228-71771247 | MS.gene038285:intron | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | + | chr5.4:71771247-71771228 | None:intergenic | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | - | chr5.4:71771227-71771246 | MS.gene038285:intron | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | + | chr5.4:71771246-71771227 | None:intergenic | 65.0% | |
TGAGACTGCCGAAGCCGCCG+AGG | - | chr5.4:71774844-71774863 | MS.gene038285:intron | 70.0% | |
TGCTGCTGCCTCGGCGGCTT+CGG | + | chr5.4:71774855-71774874 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 71770846 | 71776574 | 71770846 | ID=MS.gene038285 |
chr5.4 | mRNA | 71770846 | 71776574 | 71770846 | ID=MS.gene038285.t1;Parent=MS.gene038285 |
chr5.4 | exon | 71776458 | 71776574 | 71776458 | ID=MS.gene038285.t1.exon1;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71776458 | 71776574 | 71776458 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71775685 | 71775746 | 71775685 | ID=MS.gene038285.t1.exon2;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71775685 | 71775746 | 71775685 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71775492 | 71775575 | 71775492 | ID=MS.gene038285.t1.exon3;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71775492 | 71775575 | 71775492 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71775330 | 71775361 | 71775330 | ID=MS.gene038285.t1.exon4;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71775330 | 71775361 | 71775330 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71775133 | 71775214 | 71775133 | ID=MS.gene038285.t1.exon5;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71775133 | 71775214 | 71775133 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71773988 | 71774216 | 71773988 | ID=MS.gene038285.t1.exon6;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71773988 | 71774216 | 71773988 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71772444 | 71772671 | 71772444 | ID=MS.gene038285.t1.exon7;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71772444 | 71772671 | 71772444 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71771823 | 71772115 | 71771823 | ID=MS.gene038285.t1.exon8;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71771823 | 71772115 | 71771823 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
chr5.4 | exon | 71770846 | 71771194 | 71770846 | ID=MS.gene038285.t1.exon9;Parent=MS.gene038285.t1 |
chr5.4 | CDS | 71770846 | 71771194 | 71770846 | ID=cds.MS.gene038285.t1;Parent=MS.gene038285.t1 |
Gene Sequence |
Protein sequence |