Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008096.t1 | AES71093.1 | 98.8 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 7.80E-168 | 599.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008096.t1 | Q5XF09 | 91.1 | 304 | 27 | 0 | 19 | 322 | 5 | 308 | 1.3e-150 | 533.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008096.t1 | G7JAM9 | 98.8 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 5.6e-168 | 599.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030825 | MS.gene008096 | PPI |
| MS.gene039961 | MS.gene008096 | PPI |
| MS.gene57307 | MS.gene008096 | PPI |
| MS.gene008096 | MS.gene032018 | PPI |
| MS.gene011488 | MS.gene008096 | PPI |
| MS.gene073024 | MS.gene008096 | PPI |
| MS.gene40371 | MS.gene008096 | PPI |
| MS.gene008096 | MS.gene014715 | PPI |
| MS.gene061794 | MS.gene008096 | PPI |
| MS.gene031892 | MS.gene008096 | PPI |
| MS.gene99882 | MS.gene008096 | PPI |
| MS.gene28061 | MS.gene008096 | PPI |
| MS.gene008096 | MS.gene071788 | PPI |
| MS.gene69267 | MS.gene008096 | PPI |
| MS.gene008096 | MS.gene007969 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008096.t1 | MTR_3g070000 | 98.762 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 0.0 | 641 |
| MS.gene008096.t1 | MTR_5g081710 | 90.759 | 303 | 28 | 0 | 20 | 322 | 4 | 306 | 0.0 | 564 |
| MS.gene008096.t1 | MTR_3g462070 | 79.805 | 307 | 62 | 0 | 16 | 322 | 1 | 307 | 0.0 | 520 |
| MS.gene008096.t1 | MTR_4g018760 | 74.662 | 296 | 75 | 0 | 25 | 320 | 13 | 308 | 8.32e-164 | 459 |
| MS.gene008096.t1 | MTR_8g090130 | 73.220 | 295 | 79 | 0 | 28 | 322 | 15 | 309 | 7.36e-158 | 444 |
| MS.gene008096.t1 | MTR_4g101860 | 68.243 | 296 | 94 | 0 | 28 | 323 | 56 | 351 | 3.89e-138 | 395 |
| MS.gene008096.t1 | MTR_3g072380 | 33.219 | 292 | 191 | 3 | 29 | 319 | 19 | 307 | 2.93e-50 | 170 |
| MS.gene008096.t1 | MTR_1g030320 | 33.448 | 290 | 187 | 4 | 32 | 319 | 21 | 306 | 1.05e-49 | 169 |
| MS.gene008096.t1 | MTR_0011s0320 | 32.653 | 294 | 188 | 4 | 29 | 318 | 18 | 305 | 3.62e-36 | 133 |
| MS.gene008096.t1 | MTR_4g114360 | 32.441 | 299 | 182 | 6 | 29 | 318 | 18 | 305 | 1.94e-32 | 123 |
| MS.gene008096.t1 | MTR_3g072380 | 31.148 | 183 | 124 | 1 | 29 | 211 | 19 | 199 | 4.05e-31 | 117 |
| MS.gene008096.t1 | MTR_3g107470 | 29.392 | 296 | 195 | 5 | 29 | 318 | 22 | 309 | 8.77e-30 | 116 |
| MS.gene008096.t1 | MTR_7g110380 | 31.379 | 290 | 183 | 5 | 38 | 320 | 28 | 308 | 2.66e-28 | 113 |
| MS.gene008096.t1 | MTR_0662s0010 | 33.206 | 262 | 155 | 6 | 29 | 281 | 18 | 268 | 3.06e-26 | 105 |
| MS.gene008096.t1 | MTR_4g123900 | 29.617 | 287 | 192 | 4 | 38 | 320 | 24 | 304 | 3.71e-22 | 96.3 |
| MS.gene008096.t1 | MTR_2g070400 | 24.828 | 290 | 210 | 5 | 38 | 323 | 24 | 309 | 6.57e-21 | 92.0 |
| MS.gene008096.t1 | MTR_4g105630 | 28.136 | 295 | 196 | 8 | 32 | 319 | 92 | 377 | 7.00e-20 | 89.7 |
| MS.gene008096.t1 | MTR_4g123900 | 29.603 | 277 | 183 | 5 | 38 | 309 | 24 | 293 | 1.75e-18 | 84.3 |
| MS.gene008096.t1 | MTR_3g049400 | 22.785 | 316 | 231 | 8 | 9 | 319 | 94 | 401 | 1.16e-16 | 80.5 |
| MS.gene008096.t1 | MTR_6g005480 | 27.812 | 320 | 221 | 6 | 6 | 319 | 93 | 408 | 1.49e-15 | 77.4 |
| MS.gene008096.t1 | MTR_8g016090 | 24.150 | 294 | 205 | 8 | 25 | 306 | 169 | 456 | 3.77e-15 | 76.3 |
| MS.gene008096.t1 | MTR_4g088350 | 27.273 | 308 | 193 | 11 | 32 | 322 | 106 | 399 | 1.01e-14 | 74.7 |
| MS.gene008096.t1 | MTR_4g105630 | 26.882 | 279 | 188 | 8 | 32 | 303 | 92 | 361 | 1.92e-14 | 73.6 |
| MS.gene008096.t1 | MTR_2g022700 | 22.667 | 300 | 220 | 7 | 26 | 320 | 104 | 396 | 3.00e-14 | 73.2 |
| MS.gene008096.t1 | MTR_2g094640 | 25.080 | 311 | 206 | 7 | 24 | 320 | 7 | 304 | 3.11e-14 | 72.8 |
| MS.gene008096.t1 | MTR_3g077640 | 28.261 | 230 | 159 | 3 | 94 | 319 | 175 | 402 | 4.29e-14 | 72.8 |
| MS.gene008096.t1 | MTR_5g044220 | 25.649 | 308 | 193 | 11 | 32 | 320 | 111 | 401 | 1.18e-13 | 71.6 |
| MS.gene008096.t1 | MTR_4g058860 | 25.397 | 315 | 207 | 7 | 19 | 320 | 5 | 304 | 4.77e-13 | 69.3 |
| MS.gene008096.t1 | MTR_2g038410 | 26.978 | 278 | 167 | 11 | 37 | 299 | 67 | 323 | 6.54e-13 | 69.3 |
| MS.gene008096.t1 | MTR_2g029180 | 25.000 | 320 | 227 | 10 | 3 | 316 | 80 | 392 | 9.36e-12 | 65.9 |
| MS.gene008096.t1 | MTR_4g105630 | 28.788 | 198 | 131 | 5 | 32 | 226 | 92 | 282 | 2.10e-11 | 64.3 |
| MS.gene008096.t1 | MTR_4g105630 | 28.713 | 202 | 134 | 5 | 28 | 226 | 88 | 282 | 2.95e-11 | 63.9 |
| MS.gene008096.t1 | MTR_3g095130 | 23.448 | 290 | 214 | 3 | 35 | 323 | 24 | 306 | 4.66e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008096.t1 | AT3G11320 | 90.820 | 305 | 28 | 0 | 18 | 322 | 4 | 308 | 0.0 | 568 |
| MS.gene008096.t1 | AT5G05820 | 88.673 | 309 | 34 | 1 | 16 | 323 | 1 | 309 | 0.0 | 557 |
| MS.gene008096.t1 | AT3G10290 | 67.081 | 322 | 103 | 1 | 2 | 320 | 32 | 353 | 5.12e-157 | 443 |
| MS.gene008096.t1 | AT5G04160 | 71.186 | 295 | 85 | 0 | 28 | 322 | 15 | 309 | 6.45e-157 | 441 |
| MS.gene008096.t1 | AT1G12500 | 65.347 | 303 | 105 | 0 | 20 | 322 | 54 | 356 | 2.04e-139 | 399 |
| MS.gene008096.t1 | AT1G21870 | 35.216 | 301 | 189 | 5 | 21 | 319 | 11 | 307 | 5.92e-53 | 177 |
| MS.gene008096.t1 | AT1G77610 | 33.904 | 292 | 189 | 3 | 29 | 319 | 13 | 301 | 8.79e-51 | 171 |
| MS.gene008096.t1 | AT5G25400 | 31.419 | 296 | 189 | 5 | 29 | 318 | 22 | 309 | 1.48e-32 | 124 |
| MS.gene008096.t1 | AT5G11230 | 31.757 | 296 | 188 | 5 | 29 | 318 | 22 | 309 | 9.80e-32 | 122 |
| MS.gene008096.t1 | AT4G32390 | 31.081 | 296 | 190 | 5 | 29 | 318 | 22 | 309 | 1.16e-29 | 116 |
| MS.gene008096.t1 | AT2G25520 | 31.081 | 296 | 190 | 5 | 29 | 318 | 22 | 309 | 1.41e-28 | 113 |
| MS.gene008096.t1 | AT3G17430 | 30.314 | 287 | 190 | 4 | 38 | 320 | 25 | 305 | 9.79e-26 | 105 |
| MS.gene008096.t1 | AT3G17430 | 30.314 | 287 | 190 | 4 | 38 | 320 | 25 | 305 | 9.79e-26 | 105 |
| MS.gene008096.t1 | AT1G53660 | 25.952 | 289 | 201 | 5 | 38 | 321 | 30 | 310 | 1.89e-22 | 96.3 |
| MS.gene008096.t1 | AT1G53660 | 25.952 | 289 | 201 | 5 | 38 | 321 | 48 | 328 | 3.23e-22 | 95.9 |
| MS.gene008096.t1 | AT1G48230 | 30.584 | 291 | 184 | 6 | 38 | 320 | 25 | 305 | 9.33e-22 | 94.7 |
| MS.gene008096.t1 | AT3G14410 | 25.723 | 311 | 213 | 5 | 22 | 323 | 12 | 313 | 5.34e-21 | 92.4 |
| MS.gene008096.t1 | AT1G53660 | 25.547 | 274 | 193 | 4 | 51 | 321 | 11 | 276 | 6.55e-21 | 91.3 |
| MS.gene008096.t1 | AT5G54800 | 23.492 | 315 | 229 | 7 | 9 | 318 | 80 | 387 | 6.62e-18 | 84.0 |
| MS.gene008096.t1 | AT3G01550 | 26.769 | 325 | 227 | 6 | 1 | 319 | 54 | 373 | 1.68e-17 | 82.8 |
| MS.gene008096.t1 | AT1G53660 | 26.339 | 224 | 155 | 3 | 100 | 321 | 1 | 216 | 3.12e-17 | 80.1 |
| MS.gene008096.t1 | AT5G17630 | 25.839 | 298 | 205 | 10 | 32 | 322 | 119 | 407 | 2.20e-16 | 79.7 |
| MS.gene008096.t1 | AT1G61800 | 21.835 | 316 | 227 | 8 | 9 | 319 | 88 | 388 | 8.45e-16 | 77.8 |
| MS.gene008096.t1 | AT1G61800 | 21.698 | 318 | 229 | 8 | 9 | 321 | 88 | 390 | 8.53e-16 | 77.8 |
| MS.gene008096.t1 | AT1G48230 | 30.435 | 230 | 144 | 5 | 97 | 320 | 13 | 232 | 6.30e-15 | 74.3 |
| MS.gene008096.t1 | AT3G01550 | 26.154 | 325 | 224 | 7 | 1 | 319 | 54 | 368 | 2.60e-14 | 73.6 |
| MS.gene008096.t1 | AT5G46110 | 27.723 | 303 | 193 | 11 | 32 | 320 | 115 | 405 | 6.21e-14 | 72.4 |
| MS.gene008096.t1 | AT5G46110 | 27.723 | 303 | 193 | 11 | 32 | 320 | 115 | 405 | 6.73e-14 | 72.4 |
| MS.gene008096.t1 | AT5G57100 | 25.850 | 294 | 195 | 10 | 37 | 322 | 76 | 354 | 7.27e-14 | 72.0 |
| MS.gene008096.t1 | AT5G46110 | 27.425 | 299 | 197 | 10 | 32 | 322 | 2 | 288 | 7.45e-14 | 71.2 |
| MS.gene008096.t1 | AT5G33320 | 26.299 | 308 | 212 | 6 | 18 | 318 | 100 | 399 | 1.55e-13 | 71.2 |
| MS.gene008096.t1 | AT1G06470 | 23.867 | 331 | 226 | 9 | 11 | 323 | 61 | 383 | 6.98e-13 | 69.3 |
| MS.gene008096.t1 | AT1G06470 | 23.867 | 331 | 226 | 9 | 11 | 323 | 61 | 383 | 6.98e-13 | 69.3 |
| MS.gene008096.t1 | AT1G06470 | 23.867 | 331 | 226 | 9 | 11 | 323 | 61 | 383 | 6.98e-13 | 69.3 |
| MS.gene008096.t1 | AT1G06470 | 23.867 | 331 | 226 | 9 | 11 | 323 | 61 | 383 | 6.98e-13 | 69.3 |
| MS.gene008096.t1 | AT1G53660 | 25.843 | 178 | 129 | 2 | 38 | 212 | 48 | 225 | 7.38e-12 | 64.7 |
| MS.gene008096.t1 | AT2G28315 | 22.896 | 297 | 211 | 6 | 26 | 315 | 9 | 294 | 1.05e-11 | 65.5 |
| MS.gene008096.t1 | AT5G57100 | 28.947 | 190 | 118 | 8 | 37 | 219 | 76 | 255 | 1.96e-11 | 64.3 |
| MS.gene008096.t1 | AT2G28315 | 22.896 | 297 | 211 | 6 | 26 | 315 | 9 | 294 | 2.20e-11 | 64.3 |
| MS.gene008096.t1 | AT4G09810 | 23.490 | 298 | 217 | 4 | 30 | 323 | 16 | 306 | 4.06e-11 | 63.5 |
| MS.gene008096.t1 | AT5G55950 | 27.397 | 292 | 172 | 12 | 37 | 309 | 69 | 339 | 5.51e-11 | 63.5 |
| MS.gene008096.t1 | AT5G55950 | 27.778 | 270 | 160 | 9 | 37 | 292 | 9 | 257 | 6.07e-11 | 63.2 |
Find 62 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCAAGTTTCCATTTATT+TGG | 0.112862 | 3.3:+61247275 | MS.gene008096:CDS |
| ACCCTTGTTCCTGTTGTTAC+TGG | 0.191940 | 3.3:+61246027 | MS.gene008096:CDS |
| CACAATCATGAAATTGTTAC+AGG | 0.239454 | 3.3:+61245573 | None:intergenic |
| AAACTGGGTTTCTAAATATT+AGG | 0.258669 | 3.3:-61248867 | None:intergenic |
| ATACAATGAATCCAAATAAA+TGG | 0.258981 | 3.3:-61247286 | None:intergenic |
| TCTTCCCGCCACACTTATAA+TGG | 0.261442 | 3.3:+61247522 | MS.gene008096:CDS |
| ATCATACCAGTGACTGAAAC+TGG | 0.266685 | 3.3:-61248883 | None:intergenic |
| TTCTGTGTTTCTGTTGTGTT+TGG | 0.269088 | 3.3:+61245880 | MS.gene008096:CDS |
| GAGACGATCCCAAGATAATT+TGG | 0.307870 | 3.3:+61247581 | MS.gene008096:CDS |
| ATTGGTCAGGTTGACAAAAT+AGG | 0.310667 | 3.3:-61247629 | None:intergenic |
| AAGTATTTGTTGAGCAACTA+TGG | 0.329770 | 3.3:+61245709 | MS.gene008096:CDS |
| TCTTCCTGTATCGTTTAATC+AGG | 0.356536 | 3.3:+61245921 | MS.gene008096:CDS |
| TAGCAGATACCAAATTATCT+TGG | 0.373919 | 3.3:-61247590 | None:intergenic |
| GTATCGTTTAATCAGGCTAT+TGG | 0.374291 | 3.3:+61245928 | MS.gene008096:CDS |
| GTCACTGGTATGATGGGTTA+TGG | 0.398626 | 3.3:+61248892 | MS.gene008096:CDS |
| TCAACACGTTTCTTCACAAT+AGG | 0.398972 | 3.3:+61245637 | MS.gene008096:CDS |
| CAGGTTTCTGAAGATCAAAA+AGG | 0.421249 | 3.3:+61245592 | MS.gene008096:CDS |
| TACCAGTGCTCTGACCCTTC+AGG | 0.423819 | 3.3:+61247669 | MS.gene008096:CDS |
| AGTTTCAGTCACTGGTATGA+TGG | 0.426605 | 3.3:+61248885 | MS.gene008096:CDS |
| TCTGTGTTTCTGTTGTGTTT+GGG | 0.427601 | 3.3:+61245881 | MS.gene008096:CDS |
| AGCTGATTCCTACAGGTACT+AGG | 0.431361 | 3.3:+61248808 | MS.gene008096:intron |
| CTGGTGTTGTTATTGCTAGT+GGG | 0.433213 | 3.3:+61246046 | MS.gene008096:CDS |
| GGTTATGGACTCACAGTCTT+CGG | 0.464078 | 3.3:+61248907 | MS.gene008096:CDS |
| GATCTTAAAGAATTGAATCC+TGG | 0.465525 | 3.3:-61245839 | None:intergenic |
| AGAAACCCAGTTTCAGTCAC+TGG | 0.466134 | 3.3:+61248877 | MS.gene008096:CDS |
| CCTCCTTTACATGGCTCCAA+TGG | 0.467277 | 3.3:+61247486 | MS.gene008096:CDS |
| AATGAATCTCCTCCTTTACA+TGG | 0.468540 | 3.3:+61247477 | MS.gene008096:CDS |
| AGCAGATACCAAATTATCTT+GGG | 0.471217 | 3.3:-61247589 | None:intergenic |
| TTACATGGCTCCAATGGCTG+TGG | 0.474205 | 3.3:+61247492 | MS.gene008096:CDS |
| TACCTGAAGGGTCAGAGCAC+TGG | 0.484949 | 3.3:-61247671 | None:intergenic |
| AGAAGGAAAACCACAGCCAT+TGG | 0.484967 | 3.3:-61247502 | None:intergenic |
| CTATGCAAACTATTCGATCC+AGG | 0.487712 | 3.3:+61245821 | MS.gene008096:CDS |
| ATAGCCTGATTAAACGATAC+AGG | 0.490487 | 3.3:-61245925 | None:intergenic |
| AATCCAAATAAATGGAAACT+TGG | 0.501652 | 3.3:-61247278 | None:intergenic |
| AAAAGGTTCTAAGACAATGA+AGG | 0.505897 | 3.3:+61245609 | MS.gene008096:CDS |
| ATAACAACACCAGTAACAAC+AGG | 0.507549 | 3.3:-61246036 | None:intergenic |
| ACTGGTGTTGTTATTGCTAG+TGG | 0.510277 | 3.3:+61246045 | MS.gene008096:CDS |
| TTATAAGTGTGGCGGGAAGA+AGG | 0.513711 | 3.3:-61247519 | None:intergenic |
| CACCAGTAACAACAGGAACA+AGG | 0.523976 | 3.3:-61246029 | None:intergenic |
| GCTGATTCCTACAGGTACTA+GGG | 0.530609 | 3.3:+61248809 | MS.gene008096:intron |
| TTGGTATCTGCTATTTAACT+CGG | 0.538514 | 3.3:+61247600 | MS.gene008096:CDS |
| GTTTCAGTCACTGGTATGAT+GGG | 0.539473 | 3.3:+61248886 | MS.gene008096:CDS |
| CAGCCATTGGAGCCATGTAA+AGG | 0.544406 | 3.3:-61247489 | None:intergenic |
| GCCCTAAAATCAGTGCTACA+AGG | 0.550043 | 3.3:+61247332 | MS.gene008096:CDS |
| CAATAGAAGAACACCAATGT+TGG | 0.550271 | 3.3:-61245683 | None:intergenic |
| TTCTTCCATTATAAGTGTGG+CGG | 0.557091 | 3.3:-61247527 | None:intergenic |
| TCTTCCATTATAAGTGTGGC+GGG | 0.560381 | 3.3:-61247526 | None:intergenic |
| AAAGGTTCTAAGACAATGAA+GGG | 0.568749 | 3.3:+61245610 | MS.gene008096:CDS |
| ACTTATAATGGAAGAAAATG+TGG | 0.577031 | 3.3:+61247534 | MS.gene008096:CDS |
| TTAGCTATGTTGCTATAGCA+TGG | 0.581935 | 3.3:+61245785 | MS.gene008096:CDS |
| TGGTGTTGTTATTGCTAGTG+GGG | 0.582609 | 3.3:+61246047 | MS.gene008096:CDS |
| CTGGATCGAATAGTTTGCAT+AGG | 0.596131 | 3.3:-61245820 | None:intergenic |
| CAGGTACTAGGGAATGCTAA+AGG | 0.600457 | 3.3:+61248820 | MS.gene008096:intron |
| CAATAGGTCTTGTAGCAGCA+TGG | 0.617332 | 3.3:+61245653 | MS.gene008096:CDS |
| ACCAGTAACAACAGGAACAA+GGG | 0.620205 | 3.3:-61246028 | None:intergenic |
| TCATACCAGTGACTGAAACT+GGG | 0.622203 | 3.3:-61248882 | None:intergenic |
| CCATTGGAGCCATGTAAAGG+AGG | 0.626569 | 3.3:-61247486 | None:intergenic |
| GCATGGTATTCATCCAACAT+TGG | 0.639937 | 3.3:+61245670 | MS.gene008096:CDS |
| ATAATGGAAGAAAATGTGGT+CGG | 0.647373 | 3.3:+61247538 | MS.gene008096:CDS |
| ACAGTTGAGACTTACCTGAA+GGG | 0.665868 | 3.3:-61247683 | None:intergenic |
| AAATGTGGTCGGAATCACGT+TGG | 0.686602 | 3.3:+61247549 | MS.gene008096:CDS |
| ACACGCAGTCATATGACACA+TGG | 0.688652 | 3.3:-61245755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAATTAAATATAGA+AGG | - | chr3.3:61247885-61247904 | None:intergenic | 10.0% |
| !! | AAATAACAGATAAAAAATAA+AGG | - | chr3.3:61248025-61248044 | None:intergenic | 10.0% |
| !! | GTAAAAATTAAAATGAAACA+AGG | - | chr3.3:61248113-61248132 | None:intergenic | 15.0% |
| !! | TGTGAAAAATAAAAATATTC+TGG | + | chr3.3:61247211-61247230 | MS.gene008096:intron | 15.0% |
| !!! | AAACTAATCGTTTTATTTTT+TGG | + | chr3.3:61247388-61247407 | MS.gene008096:intron | 15.0% |
| !!! | ATTAAAAGTAATTTGAAATG+TGG | - | chr3.3:61248574-61248593 | None:intergenic | 15.0% |
| !!! | TTATATTATGACTTTTAAGA+GGG | + | chr3.3:61245984-61246003 | MS.gene008096:CDS | 15.0% |
| !!! | TTCAAGTTATATATTCAAAT+CGG | + | chr3.3:61247415-61247434 | MS.gene008096:intron | 15.0% |
| !! | AAAATGATATTGTGTATTGT+TGG | + | chr3.3:61246147-61246166 | MS.gene008096:intron | 20.0% |
| !! | AAATGAAATCACAACTAAAT+GGG | - | chr3.3:61248393-61248412 | None:intergenic | 20.0% |
| !! | AACTAAATCTTAATCTCATT+GGG | - | chr3.3:61247830-61247849 | None:intergenic | 20.0% |
| !! | AATGGTATATTATAGTATAG+GGG | + | chr3.3:61246174-61246193 | MS.gene008096:intron | 20.0% |
| !! | AATGTATACAATTAGTGTTT+AGG | + | chr3.3:61248508-61248527 | MS.gene008096:intron | 20.0% |
| !! | ACTATTAAGACTTGAAATTT+AGG | + | chr3.3:61247734-61247753 | MS.gene008096:intron | 20.0% |
| !! | AGTCATAATATAAGCAAAAA+TGG | - | chr3.3:61245977-61245996 | None:intergenic | 20.0% |
| !! | ATACAATGAATCCAAATAAA+TGG | - | chr3.3:61247289-61247308 | None:intergenic | 20.0% |
| !! | CCTATTTATAAGAGAAATTT+GGG | - | chr3.3:61247014-61247033 | None:intergenic | 20.0% |
| !! | GAATGGTATATTATAGTATA+GGG | + | chr3.3:61246173-61246192 | MS.gene008096:intron | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | - | chr3.3:61247015-61247034 | None:intergenic | 20.0% |
| !! | TGTCATAAATATAAGTAGAT+GGG | + | chr3.3:61248660-61248679 | MS.gene008096:intron | 20.0% |
| !!! | ATGTTTTTTTTTCTTCAATG+AGG | + | chr3.3:61246570-61246589 | MS.gene008096:intron | 20.0% |
| !!! | ATTCAGTTTTTAATTGTTGA+TGG | + | chr3.3:61246121-61246140 | MS.gene008096:intron | 20.0% |
| !!! | CATCAAATTTTATCTAGTTT+AGG | + | chr3.3:61246432-61246451 | MS.gene008096:intron | 20.0% |
| !!! | CTTATATTATGACTTTTAAG+AGG | + | chr3.3:61245983-61246002 | MS.gene008096:CDS | 20.0% |
| !!! | TAAATGGATTTATATGCTTT+AGG | + | chr3.3:61246600-61246619 | MS.gene008096:intron | 20.0% |
| ! | AAACTAGACTAAATATTGCT+AGG | - | chr3.3:61248140-61248159 | None:intergenic | 25.0% |
| ! | AAACTGGGTTTCTAAATATT+AGG | - | chr3.3:61248870-61248889 | None:intergenic | 25.0% |
| ! | AATCCAAATAAATGGAAACT+TGG | - | chr3.3:61247281-61247300 | None:intergenic | 25.0% |
| ! | AATTGTATTTAGTGTATGCT+TGG | + | chr3.3:61246241-61246260 | MS.gene008096:intron | 25.0% |
| ! | ACAAACAAAAACAATGAACA+AGG | - | chr3.3:61246092-61246111 | None:intergenic | 25.0% |
| ! | AGCTACATAAATATTTGATC+AGG | + | chr3.3:61248422-61248441 | MS.gene008096:intron | 25.0% |
| ! | ATATAGAAGGAAAACAAAGA+AGG | - | chr3.3:61247872-61247891 | None:intergenic | 25.0% |
| ! | ATGATATTGTGCATTGTTAA+TGG | + | chr3.3:61246352-61246371 | MS.gene008096:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | + | chr3.3:61247016-61247035 | MS.gene008096:intron | 25.0% |
| ! | CAAACAAAAACAATGAACAA+GGG | - | chr3.3:61246091-61246110 | None:intergenic | 25.0% |
| ! | CAAATGAAATCACAACTAAA+TGG | - | chr3.3:61248394-61248413 | None:intergenic | 25.0% |
| ! | CAACTAAATCTTAATCTCAT+TGG | - | chr3.3:61247831-61247850 | None:intergenic | 25.0% |
| ! | CCCAAATTTCTCTTATAAAT+AGG | + | chr3.3:61247011-61247030 | MS.gene008096:intron | 25.0% |
| ! | CCTAACTTTCTCTTATAAAT+AGG | - | chr3.3:61246932-61246951 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGAGAAAGTT+AGG | + | chr3.3:61246929-61246948 | MS.gene008096:intron | 25.0% |
| ! | GATGTCATCAAAATTATTTC+AGG | + | chr3.3:61248212-61248231 | MS.gene008096:intron | 25.0% |
| ! | GGAATGGTATATTATAGTAT+AGG | + | chr3.3:61246172-61246191 | MS.gene008096:intron | 25.0% |
| ! | GTGTCATAAATATAAGTAGA+TGG | + | chr3.3:61248659-61248678 | MS.gene008096:intron | 25.0% |
| ! | TCAAATATTTATGTAGCTGA+TGG | - | chr3.3:61248420-61248439 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTGAATGTATT+TGG | + | chr3.3:61246952-61246971 | MS.gene008096:intron | 25.0% |
| ! | TGAATAATGTGACTTATGTT+TGG | + | chr3.3:61246318-61246337 | MS.gene008096:intron | 25.0% |
| ! | TGATATTGTGCATTGTTAAT+GGG | + | chr3.3:61246353-61246372 | MS.gene008096:intron | 25.0% |
| ! | TGTAAGATTATGTGTTGAAT+TGG | + | chr3.3:61246484-61246503 | MS.gene008096:intron | 25.0% |
| ! | TTTGTATCACAATATTAGCA+TGG | + | chr3.3:61247990-61248009 | MS.gene008096:intron | 25.0% |
| !! | ACTTATAATGGAAGAAAATG+TGG | + | chr3.3:61247534-61247553 | MS.gene008096:CDS | 25.0% |
| !! | ATTTTCTTCCATTATAAGTG+TGG | - | chr3.3:61247533-61247552 | None:intergenic | 25.0% |
| !! | TATCTAGTTTAGGTTTGTTT+GGG | + | chr3.3:61246442-61246461 | MS.gene008096:intron | 25.0% |
| !! | TTATCTAGTTTAGGTTTGTT+TGG | + | chr3.3:61246441-61246460 | MS.gene008096:intron | 25.0% |
| !!! | AATAATTTTGATGACATCTC+TGG | - | chr3.3:61248210-61248229 | None:intergenic | 25.0% |
| !!! | TATAGGGGAGAATTTTTTTT+GGG | + | chr3.3:61246189-61246208 | MS.gene008096:intron | 25.0% |
| !!! | TCAATGAGGAATTTGTTAAA+TGG | + | chr3.3:61246584-61246603 | MS.gene008096:intron | 25.0% |
| !!! | TGTTATTTTGTAATGTGCAT+TGG | + | chr3.3:61248037-61248056 | MS.gene008096:intron | 25.0% |
| AAATCTTAATCTCATTGGGT+GGG | - | chr3.3:61247826-61247845 | None:intergenic | 30.0% | |
| AAATGGGAGAGAAAGAAAAT+TGG | - | chr3.3:61248377-61248396 | None:intergenic | 30.0% | |
| AATCTACCATTGCTTAAAAC+TGG | - | chr3.3:61247155-61247174 | None:intergenic | 30.0% | |
| AATGTCACTAAACTTTCTAC+TGG | + | chr3.3:61248236-61248255 | MS.gene008096:intron | 30.0% | |
| AGCAGATACCAAATTATCTT+GGG | - | chr3.3:61247592-61247611 | None:intergenic | 30.0% | |
| AGTCTGAATATGTTCTGTAT+TGG | + | chr3.3:61246883-61246902 | MS.gene008096:intron | 30.0% | |
| AGTCTTAATAGTTTCGAAAG+AGG | - | chr3.3:61247726-61247745 | None:intergenic | 30.0% | |
| ATAAATATAAGTAGATGGGC+TGG | + | chr3.3:61248664-61248683 | MS.gene008096:intron | 30.0% | |
| ATGACTCATTAACTATGATC+AGG | + | chr3.3:61248320-61248339 | MS.gene008096:intron | 30.0% | |
| ATGTTTCGTGACCAAAAAAT+TGG | - | chr3.3:61247650-61247669 | None:intergenic | 30.0% | |
| CTTTCTCTTATAAATAGGAC+CGG | - | chr3.3:61246927-61246946 | None:intergenic | 30.0% | |
| GAACCAAGTTTCCATTTATT+TGG | + | chr3.3:61247275-61247294 | MS.gene008096:CDS | 30.0% | |
| GATCTTAAAGAATTGAATCC+TGG | - | chr3.3:61245842-61245861 | None:intergenic | 30.0% | |
| GCAAAAATGGCAGTAAAAAA+AGG | - | chr3.3:61245964-61245983 | None:intergenic | 30.0% | |
| GTCTTAATAGTTTCGAAAGA+GGG | - | chr3.3:61247725-61247744 | None:intergenic | 30.0% | |
| TAAATCTTAATCTCATTGGG+TGG | - | chr3.3:61247827-61247846 | None:intergenic | 30.0% | |
| TAGCAGATACCAAATTATCT+TGG | - | chr3.3:61247593-61247612 | None:intergenic | 30.0% | |
| TCTTCCTCTATTTGATCATA+GGG | + | chr3.3:61247251-61247270 | MS.gene008096:intron | 30.0% | |
| TGATATTGTGTATTGTTGGT+AGG | + | chr3.3:61246151-61246170 | MS.gene008096:intron | 30.0% | |
| ! | AAGTATTTGTTGAGCAACTA+TGG | + | chr3.3:61245709-61245728 | MS.gene008096:CDS | 30.0% |
| ! | ATAATGGAAGAAAATGTGGT+CGG | + | chr3.3:61247538-61247557 | MS.gene008096:CDS | 30.0% |
| ! | GAATTTTGCTTTCTTCTGAA+GGG | + | chr3.3:61247354-61247373 | MS.gene008096:CDS | 30.0% |
| ! | TAAATATAAGTAGATGGGCT+GGG | + | chr3.3:61248665-61248684 | MS.gene008096:intron | 30.0% |
| ! | TTGGTATCTGCTATTTAACT+CGG | + | chr3.3:61247600-61247619 | MS.gene008096:CDS | 30.0% |
| !! | AAAAGGTTCTAAGACAATGA+AGG | + | chr3.3:61245609-61245628 | MS.gene008096:CDS | 30.0% |
| !! | AAAGGTTCTAAGACAATGAA+GGG | + | chr3.3:61245610-61245629 | MS.gene008096:CDS | 30.0% |
| !! | ATACGAGTTTTGTCAAATAG+TGG | + | chr3.3:61246696-61246715 | MS.gene008096:intron | 30.0% |
| !! | TACGAGTTTTGTCAAATAGT+GGG | + | chr3.3:61246697-61246716 | MS.gene008096:intron | 30.0% |
| !! | TATTATGACTTTTAAGAGGG+AGG | + | chr3.3:61245987-61246006 | MS.gene008096:CDS | 30.0% |
| !!! | GTATAGGGGAGAATTTTTTT+TGG | + | chr3.3:61246188-61246207 | MS.gene008096:intron | 30.0% |
| !!! | TATGGGGGAGTTATTTTTTT+GGG | + | chr3.3:61246386-61246405 | MS.gene008096:intron | 30.0% |
| !!! | TTGTATCCAGTTTTAAGCAA+TGG | + | chr3.3:61247146-61247165 | MS.gene008096:intron | 30.0% |
| !!! | TTTGGGTGTTGACTTTTTTA+TGG | + | chr3.3:61246403-61246422 | MS.gene008096:intron | 30.0% |
| AACTATGATCAGGATTTGTG+TGG | + | chr3.3:61248330-61248349 | MS.gene008096:intron | 35.0% | |
| AATGAATCTCCTCCTTTACA+TGG | + | chr3.3:61247477-61247496 | MS.gene008096:CDS | 35.0% | |
| AGTACAAAATAGTACACAGC+TGG | - | chr3.3:61248693-61248712 | None:intergenic | 35.0% | |
| ATAACAACACCAGTAACAAC+AGG | - | chr3.3:61246039-61246058 | None:intergenic | 35.0% | |
| ATAGCCTGATTAAACGATAC+AGG | - | chr3.3:61245928-61245947 | None:intergenic | 35.0% | |
| CAATAGAAGAACACCAATGT+TGG | - | chr3.3:61245686-61245705 | None:intergenic | 35.0% | |
| CATGTTAATTAACCATCCCA+AGG | - | chr3.3:61248477-61248496 | None:intergenic | 35.0% | |
| CATTGTTAATGGGAATGGTA+TGG | + | chr3.3:61246363-61246382 | MS.gene008096:intron | 35.0% | |
| GTATCGTTTAATCAGGCTAT+TGG | + | chr3.3:61245928-61245947 | MS.gene008096:CDS | 35.0% | |
| GTCTTCCTCTATTTGATCAT+AGG | + | chr3.3:61247250-61247269 | MS.gene008096:intron | 35.0% | |
| TAATGGGAATGGTATGGTAT+GGG | + | chr3.3:61246369-61246388 | MS.gene008096:intron | 35.0% | |
| TCAACACGTTTCTTCACAAT+AGG | + | chr3.3:61245637-61245656 | MS.gene008096:CDS | 35.0% | |
| TCACAATATTAGCATGGTCT+TGG | + | chr3.3:61247996-61248015 | MS.gene008096:intron | 35.0% | |
| TCTTCCTGTATCGTTTAATC+AGG | + | chr3.3:61245921-61245940 | MS.gene008096:CDS | 35.0% | |
| TGACACATGGTGAGAAAAAT+AGG | - | chr3.3:61245745-61245764 | None:intergenic | 35.0% | |
| TTAATGGGAATGGTATGGTA+TGG | + | chr3.3:61246368-61246387 | MS.gene008096:intron | 35.0% | |
| TTAGCTATGTTGCTATAGCA+TGG | + | chr3.3:61245785-61245804 | MS.gene008096:CDS | 35.0% | |
| TTCACCCTATGATCAAATAG+AGG | - | chr3.3:61247258-61247277 | None:intergenic | 35.0% | |
| TTCTTCCATTATAAGTGTGG+CGG | - | chr3.3:61247530-61247549 | None:intergenic | 35.0% | |
| TTGTGCATTGTTAATGGGAA+TGG | + | chr3.3:61246358-61246377 | MS.gene008096:intron | 35.0% | |
| ! | CAGGTTTCTGAAGATCAAAA+AGG | + | chr3.3:61245592-61245611 | MS.gene008096:CDS | 35.0% |
| ! | GGAATTTTGCTTTCTTCTGA+AGG | + | chr3.3:61247353-61247372 | MS.gene008096:CDS | 35.0% |
| ! | GTTGAGTCAACTTTGTCTTT+TGG | + | chr3.3:61246628-61246647 | MS.gene008096:intron | 35.0% |
| ! | GTTTGGGATGTGATTTCAAA+TGG | + | chr3.3:61246458-61246477 | MS.gene008096:intron | 35.0% |
| ! | TCTGTGTTTCTGTTGTGTTT+GGG | + | chr3.3:61245881-61245900 | MS.gene008096:CDS | 35.0% |
| ! | TGCAGTCATTTGTGTGATTT+TGG | + | chr3.3:61248060-61248079 | MS.gene008096:intron | 35.0% |
| ! | TTCTGTGTTTCTGTTGTGTT+TGG | + | chr3.3:61245880-61245899 | MS.gene008096:CDS | 35.0% |
| ! | TTGTGTATTGTTGGTAGGAA+TGG | + | chr3.3:61246156-61246175 | MS.gene008096:intron | 35.0% |
| !! | AAATATAAGTAGATGGGCTG+GGG | + | chr3.3:61248666-61248685 | MS.gene008096:intron | 35.0% |
| !! | ATTGGTCAGGTTGACAAAAT+AGG | - | chr3.3:61247632-61247651 | None:intergenic | 35.0% |
| !! | CAAGAATGTTAGGCTTTGTT+TGG | + | chr3.3:61248607-61248626 | MS.gene008096:intron | 35.0% |
| !! | TTAGTGTATGCTTGGTTCTA+TGG | + | chr3.3:61246249-61246268 | MS.gene008096:intron | 35.0% |
| !! | TTATCCCTTTGTTCGCTTTT+TGG | - | chr3.3:61248953-61248972 | None:intergenic | 35.0% |
| !!! | GTATGGGGGAGTTATTTTTT+TGG | + | chr3.3:61246385-61246404 | MS.gene008096:intron | 35.0% |
| !!! | TCCTTGTAGCACTGATTTTA+GGG | - | chr3.3:61247336-61247355 | None:intergenic | 35.0% |
| !!! | TGTCAACCTGACCAATTTTT+TGG | + | chr3.3:61247636-61247655 | MS.gene008096:CDS | 35.0% |
| !!! | TTCCTTGTAGCACTGATTTT+AGG | - | chr3.3:61247337-61247356 | None:intergenic | 35.0% |
| !!! | TTGGGAGGTTGACTTTTTTA+TGG | + | chr3.3:61246207-61246226 | MS.gene008096:intron | 35.0% |
| AAAGCCTAACATTCTTGCAG+AGG | - | chr3.3:61248604-61248623 | None:intergenic | 40.0% | |
| AACAGTTGAGACTTACCTGA+AGG | - | chr3.3:61247687-61247706 | None:intergenic | 40.0% | |
| AAGCCTAACATTCTTGCAGA+GGG | - | chr3.3:61248603-61248622 | None:intergenic | 40.0% | |
| AAGTAATATCATGCCCTGGT+TGG | - | chr3.3:61247054-61247073 | None:intergenic | 40.0% | |
| AATGGGAATGGTATGGTATG+GGG | + | chr3.3:61246370-61246389 | MS.gene008096:intron | 40.0% | |
| ACAGTTGAGACTTACCTGAA+GGG | - | chr3.3:61247686-61247705 | None:intergenic | 40.0% | |
| ACCAGTAACAACAGGAACAA+GGG | - | chr3.3:61246031-61246050 | None:intergenic | 40.0% | |
| ACTGTAGCATTGTAGTGTCA+AGG | + | chr3.3:61246802-61246821 | MS.gene008096:intron | 40.0% | |
| AGTTTCAGTCACTGGTATGA+TGG | + | chr3.3:61248885-61248904 | MS.gene008096:CDS | 40.0% | |
| ATCATACCAGTGACTGAAAC+TGG | - | chr3.3:61248886-61248905 | None:intergenic | 40.0% | |
| CAACAAGTTCTCTCATCTGT+TGG | + | chr3.3:61247910-61247929 | MS.gene008096:intron | 40.0% | |
| CAACAGATGAGAGAACTTGT+TGG | - | chr3.3:61247912-61247931 | None:intergenic | 40.0% | |
| CTATGCAAACTATTCGATCC+AGG | + | chr3.3:61245821-61245840 | MS.gene008096:CDS | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | chr3.3:61247020-61247039 | MS.gene008096:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr3.3:61247039-61247020 | None:intergenic | 40.0% | |
| GAAGCCAAAAAGCGAACAAA+GGG | + | chr3.3:61248946-61248965 | MS.gene008096:CDS | 40.0% | |
| GAGACGATCCCAAGATAATT+TGG | + | chr3.3:61247581-61247600 | MS.gene008096:CDS | 40.0% | |
| GCATGGTATTCATCCAACAT+TGG | + | chr3.3:61245670-61245689 | MS.gene008096:CDS | 40.0% | |
| GTTTCAGTCACTGGTATGAT+GGG | + | chr3.3:61248886-61248905 | MS.gene008096:CDS | 40.0% | |
| TCAGAAGTAATATCATGCCC+TGG | - | chr3.3:61247058-61247077 | None:intergenic | 40.0% | |
| TCATACCAGTGACTGAAACT+GGG | - | chr3.3:61248885-61248904 | None:intergenic | 40.0% | |
| TCGTGACCAAAAAATTGGTC+AGG | - | chr3.3:61247645-61247664 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | chr3.3:61247019-61247038 | MS.gene008096:intron | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr3.3:61247038-61247019 | None:intergenic | 40.0% | |
| TCTTCCATTATAAGTGTGGC+GGG | - | chr3.3:61247529-61247548 | None:intergenic | 40.0% | |
| TGCTGCATATGAATGACCTT+GGG | + | chr3.3:61248458-61248477 | MS.gene008096:intron | 40.0% | |
| TGGTTGAGTTCATAACTGAG+TGG | + | chr3.3:61248350-61248369 | MS.gene008096:intron | 40.0% | |
| TTGCTGCATATGAATGACCT+TGG | + | chr3.3:61248457-61248476 | MS.gene008096:intron | 40.0% | |
| TTTCCCTCTGCAAGAATGTT+AGG | + | chr3.3:61248597-61248616 | MS.gene008096:intron | 40.0% | |
| ! | CTGGATCGAATAGTTTGCAT+AGG | - | chr3.3:61245823-61245842 | None:intergenic | 40.0% |
| ! | GTAGTTGGGACATCAGATTT+TGG | + | chr3.3:61247932-61247951 | MS.gene008096:intron | 40.0% |
| ! | TTGCTTTCTTCTGAAGGGTA+AGG | + | chr3.3:61247359-61247378 | MS.gene008096:intron | 40.0% |
| !! | ACTGGTGTTGTTATTGCTAG+TGG | + | chr3.3:61246045-61246064 | MS.gene008096:CDS | 40.0% |
| !! | CTGGTGTTGTTATTGCTAGT+GGG | + | chr3.3:61246046-61246065 | MS.gene008096:CDS | 40.0% |
| !! | TCTCTCATCTGTTGGTAGTT+GGG | + | chr3.3:61247918-61247937 | MS.gene008096:intron | 40.0% |
| !! | TGGTGTTGTTATTGCTAGTG+GGG | + | chr3.3:61246047-61246066 | MS.gene008096:CDS | 40.0% |
| !! | TTCTCTCATCTGTTGGTAGT+TGG | + | chr3.3:61247917-61247936 | MS.gene008096:intron | 40.0% |
| !! | TTGTTTGGCACTGGATGTTT+TGG | + | chr3.3:61248622-61248641 | MS.gene008096:intron | 40.0% |
| !!! | AGGGGAGAATTTTTTTTGGG+AGG | + | chr3.3:61246192-61246211 | MS.gene008096:intron | 40.0% |
| AAATGTGGTCGGAATCACGT+TGG | + | chr3.3:61247549-61247568 | MS.gene008096:CDS | 45.0% | |
| ACACGCAGTCATATGACACA+TGG | - | chr3.3:61245758-61245777 | None:intergenic | 45.0% | |
| ACCCTTGTTCCTGTTGTTAC+TGG | + | chr3.3:61246027-61246046 | MS.gene008096:CDS | 45.0% | |
| AGAAACCCAGTTTCAGTCAC+TGG | + | chr3.3:61248877-61248896 | MS.gene008096:CDS | 45.0% | |
| AGAAGGAAAACCACAGCCAT+TGG | - | chr3.3:61247505-61247524 | None:intergenic | 45.0% | |
| ATGGGAATGGTATGGTATGG+GGG | + | chr3.3:61246371-61246390 | MS.gene008096:intron | 45.0% | |
| CACCAGTAACAACAGGAACA+AGG | - | chr3.3:61246032-61246051 | None:intergenic | 45.0% | |
| CAGGTACTAGGGAATGCTAA+AGG | + | chr3.3:61248820-61248839 | MS.gene008096:intron | 45.0% | |
| CGAAGCCAAAAAGCGAACAA+AGG | + | chr3.3:61248945-61248964 | MS.gene008096:CDS | 45.0% | |
| GCATATGAATGACCTTGGGA+TGG | + | chr3.3:61248462-61248481 | MS.gene008096:intron | 45.0% | |
| GCATTGAATGATACTCCCTC+CGG | + | chr3.3:61246905-61246924 | MS.gene008096:intron | 45.0% | |
| GCCCTAAAATCAGTGCTACA+AGG | + | chr3.3:61247332-61247351 | MS.gene008096:CDS | 45.0% | |
| GGTTATGGACTCACAGTCTT+CGG | + | chr3.3:61248907-61248926 | MS.gene008096:CDS | 45.0% | |
| TACCTGTAGGAATCAGCTCT+AGG | - | chr3.3:61248806-61248825 | None:intergenic | 45.0% | |
| TAGCATTCCCTAGTACCTGT+AGG | - | chr3.3:61248819-61248838 | None:intergenic | 45.0% | |
| TCTTCCCGCCACACTTATAA+TGG | + | chr3.3:61247522-61247541 | MS.gene008096:CDS | 45.0% | |
| TGGTTGGAATATACTCCCTC+CGG | - | chr3.3:61247038-61247057 | None:intergenic | 45.0% | |
| ! | AGCTGATTCCTACAGGTACT+AGG | + | chr3.3:61248808-61248827 | MS.gene008096:intron | 45.0% |
| ! | ATCCTAGAGCTGATTCCTAC+AGG | + | chr3.3:61248801-61248820 | MS.gene008096:intron | 45.0% |
| ! | CAATAGGTCTTGTAGCAGCA+TGG | + | chr3.3:61245653-61245672 | MS.gene008096:CDS | 45.0% |
| ! | GAGGGAGTATATTCCAACCA+GGG | + | chr3.3:61247038-61247057 | MS.gene008096:intron | 45.0% |
| ! | GCTGATTCCTACAGGTACTA+GGG | + | chr3.3:61248809-61248828 | MS.gene008096:intron | 45.0% |
| ! | GTTGGGACATCAGATTTTGG+TGG | + | chr3.3:61247935-61247954 | MS.gene008096:intron | 45.0% |
| ! | TTATAAGTGTGGCGGGAAGA+AGG | - | chr3.3:61247522-61247541 | None:intergenic | 45.0% |
| !! | GTCACTGGTATGATGGGTTA+TGG | + | chr3.3:61248892-61248911 | MS.gene008096:CDS | 45.0% |
| !! | TGACTTTTAAGAGGGAGGCT+TGG | + | chr3.3:61245992-61246011 | MS.gene008096:CDS | 45.0% |
| !! | TGTTAGGCTTTGTTTGGCAC+TGG | + | chr3.3:61248613-61248632 | MS.gene008096:intron | 45.0% |
| !!! | TTTTATAATCAATTTTATTT+TGG | + | chr3.3:61248275-61248294 | MS.gene008096:intron | 5.0% |
| CAGCCATTGGAGCCATGTAA+AGG | - | chr3.3:61247492-61247511 | None:intergenic | 50.0% | |
| CCATTGGAGCCATGTAAAGG+AGG | - | chr3.3:61247489-61247508 | None:intergenic | 50.0% | |
| CCTCCTTTACATGGCTCCAA+TGG | + | chr3.3:61247486-61247505 | MS.gene008096:CDS | 50.0% | |
| TTACATGGCTCCAATGGCTG+TGG | + | chr3.3:61247492-61247511 | MS.gene008096:CDS | 50.0% | |
| ! | GGAGGGAGTATATTCCAACC+AGG | + | chr3.3:61247037-61247056 | MS.gene008096:intron | 50.0% |
| TACCAGTGCTCTGACCCTTC+AGG | + | chr3.3:61247669-61247688 | MS.gene008096:CDS | 55.0% | |
| TACCTGAAGGGTCAGAGCAC+TGG | - | chr3.3:61247674-61247693 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 61245580 | 61248972 | 61245580 | ID=MS.gene008096 |
| chr3.3 | mRNA | 61245580 | 61248972 | 61245580 | ID=MS.gene008096.t1;Parent=MS.gene008096 |
| chr3.3 | exon | 61245580 | 61246068 | 61245580 | ID=MS.gene008096.t1.exon1;Parent=MS.gene008096.t1 |
| chr3.3 | CDS | 61245580 | 61246068 | 61245580 | ID=cds.MS.gene008096.t1;Parent=MS.gene008096.t1 |
| chr3.3 | exon | 61247272 | 61247375 | 61247272 | ID=MS.gene008096.t1.exon2;Parent=MS.gene008096.t1 |
| chr3.3 | CDS | 61247272 | 61247375 | 61247272 | ID=cds.MS.gene008096.t1;Parent=MS.gene008096.t1 |
| chr3.3 | exon | 61247462 | 61247690 | 61247462 | ID=MS.gene008096.t1.exon3;Parent=MS.gene008096.t1 |
| chr3.3 | CDS | 61247462 | 61247690 | 61247462 | ID=cds.MS.gene008096.t1;Parent=MS.gene008096.t1 |
| chr3.3 | exon | 61248823 | 61248972 | 61248823 | ID=MS.gene008096.t1.exon4;Parent=MS.gene008096.t1 |
| chr3.3 | CDS | 61248823 | 61248972 | 61248823 | ID=cds.MS.gene008096.t1;Parent=MS.gene008096.t1 |
| Gene Sequence |
| Protein sequence |
