Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041602.t1 | XP_013458264.1 | 93.8 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 3.80E-262 | 913.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041602.t1 | Q9M7Z1 | 60.2 | 457 | 147 | 3 | 49 | 505 | 62 | 483 | 2.6e-150 | 533.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041602.t1 | A0A072V2G4 | 93.8 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 2.7e-262 | 913.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041602 | MS.gene81790 | PPI |
| MS.gene041602 | MS.gene73491 | PPI |
| MS.gene041602 | MS.gene81379 | PPI |
| MS.gene037762 | MS.gene041602 | PPI |
| MS.gene041602 | MS.gene061817 | PPI |
| MS.gene041602 | MS.gene072037 | PPI |
| MS.gene041602 | MS.gene63889 | PPI |
| MS.gene041602 | MS.gene047179 | PPI |
| MS.gene041602 | MS.gene48056 | PPI |
| MS.gene041602 | MS.gene020723 | PPI |
| MS.gene041602 | MS.gene073516 | PPI |
| MS.gene80759 | MS.gene041602 | PPI |
| MS.gene041602 | MS.gene002068 | PPI |
| MS.gene041602 | MS.gene00641 | PPI |
| MS.gene041602 | MS.gene065539 | PPI |
| MS.gene041602 | MS.gene020722 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041602.t1 | MTR_4g120220 | 93.846 | 520 | 17 | 1 | 1 | 505 | 1 | 520 | 0.0 | 998 |
| MS.gene041602.t1 | MTR_8g018770 | 26.509 | 464 | 294 | 15 | 56 | 502 | 110 | 543 | 2.42e-36 | 142 |
| MS.gene041602.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 79 | 488 | 225 | 619 | 2.96e-32 | 130 |
| MS.gene041602.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 79 | 488 | 217 | 611 | 3.32e-32 | 130 |
| MS.gene041602.t1 | MTR_1g111140 | 28.538 | 431 | 286 | 8 | 74 | 502 | 60 | 470 | 7.96e-30 | 122 |
| MS.gene041602.t1 | MTR_1g096240 | 25.664 | 452 | 271 | 8 | 74 | 502 | 48 | 457 | 4.37e-25 | 108 |
| MS.gene041602.t1 | MTR_5g093300 | 32.367 | 207 | 133 | 4 | 299 | 504 | 255 | 455 | 8.09e-23 | 101 |
| MS.gene041602.t1 | MTR_2g006820 | 32.367 | 207 | 133 | 4 | 299 | 504 | 253 | 453 | 9.07e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041602.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 49 | 505 | 62 | 483 | 0.0 | 550 |
| MS.gene041602.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 49 | 505 | 62 | 483 | 0.0 | 550 |
| MS.gene041602.t1 | AT3G13930 | 27.721 | 487 | 290 | 20 | 38 | 502 | 93 | 539 | 5.56e-37 | 143 |
| MS.gene041602.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 56 | 502 | 107 | 539 | 8.38e-37 | 143 |
| MS.gene041602.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 56 | 502 | 107 | 539 | 8.38e-37 | 143 |
| MS.gene041602.t1 | AT3G25860 | 27.273 | 429 | 297 | 7 | 74 | 502 | 67 | 480 | 1.51e-31 | 127 |
| MS.gene041602.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 50 | 502 | 201 | 637 | 8.29e-31 | 126 |
| MS.gene041602.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 50 | 502 | 277 | 713 | 9.94e-31 | 127 |
| MS.gene041602.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 166 | 365 | 2.01e-22 | 99.4 |
| MS.gene041602.t1 | AT1G34430 | 24.945 | 457 | 273 | 10 | 74 | 502 | 51 | 465 | 5.20e-22 | 99.4 |
| MS.gene041602.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 264 | 463 | 6.28e-22 | 99.0 |
| MS.gene041602.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 303 | 504 | 265 | 464 | 6.50e-22 | 99.0 |
| MS.gene041602.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 303 | 504 | 265 | 464 | 1.06e-21 | 98.2 |
| MS.gene041602.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 303 | 504 | 265 | 464 | 1.06e-21 | 98.2 |
Find 0 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTTAGAAATTAGTA+GGG | + | 32557:5098-5117 | MS.gene041602:intron | 10.0% |
| !! | TTATAAATTTAGAAATTAGT+AGG | + | 32557:5097-5116 | MS.gene041602:intron | 10.0% |
| !!! | AAAATATTCTTTAAAAATCA+TGG | + | 32557:7119-7138 | MS.gene041602:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | + | 32557:6409-6428 | MS.gene041602:intron | 10.0% |
| !!! | AATGATTTATTATGTTATTT+TGG | + | 32557:4885-4904 | MS.gene041602:intron | 10.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | - | 32557:5753-5772 | None:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | - | 32557:6464-6483 | None:intergenic | 15.0% |
| !! | CCTATTTATACTTATAATTT+GGG | - | 32557:5576-5595 | None:intergenic | 15.0% |
| !! | TCCTATTTATACTTATAATT+TGG | - | 32557:5577-5596 | None:intergenic | 15.0% |
| !!! | ATTTATTATGTTATTTTGGT+AGG | + | 32557:4889-4908 | MS.gene041602:intron | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | - | 32557:7840-7859 | None:intergenic | 15.0% |
| !!! | TTTATTATGTTATTTTGGTA+GGG | + | 32557:4890-4909 | MS.gene041602:intron | 15.0% |
| !! | ATCACAATATAAATTTGACA+CGG | + | 32557:7347-7366 | MS.gene041602:intron | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | + | 32557:6143-6162 | MS.gene041602:CDS | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | + | 32557:6896-6915 | MS.gene041602:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | + | 32557:7936-7955 | MS.gene041602:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | - | 32557:5754-5773 | None:intergenic | 20.0% |
| !! | CCCAAATTATAAGTATAAAT+AGG | + | 32557:5573-5592 | MS.gene041602:intron | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | - | 32557:6894-6913 | None:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | + | 32557:6622-6641 | MS.gene041602:intron | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | - | 32557:6491-6510 | None:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | + | 32557:7861-7880 | MS.gene041602:intron | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | - | 32557:7347-7366 | None:intergenic | 20.0% |
| !! | TGTTTATATGGCATTTATTT+GGG | + | 32557:5362-5381 | MS.gene041602:intron | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | - | 32557:7299-7318 | None:intergenic | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | + | 32557:7937-7956 | MS.gene041602:intron | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | + | 32557:5705-5724 | MS.gene041602:intron | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | + | 32557:5706-5725 | MS.gene041602:intron | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | + | 32557:7229-7248 | MS.gene041602:intron | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | - | 32557:7441-7460 | None:intergenic | 20.0% |
| !!! | GTATTTTTAAACATGTTTGA+GGG | + | 32557:5199-5218 | MS.gene041602:intron | 20.0% |
| !!! | TGTATTTTTAAACATGTTTG+AGG | + | 32557:5198-5217 | MS.gene041602:intron | 20.0% |
| !!! | TTATACTTATAATTTGGGTT+TGG | - | 32557:5571-5590 | None:intergenic | 20.0% |
| !!! | TTATTATGTTATTTTGGTAG+GGG | + | 32557:4891-4910 | MS.gene041602:intron | 20.0% |
| !!! | TTTAATTTGAAGCATGTTAA+GGG | + | 32557:4664-4683 | MS.gene041602:CDS | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | + | 32557:7305-7324 | MS.gene041602:intron | 20.0% |
| ! | AAAACCATAAATAACCATAC+AGG | - | 32557:7522-7541 | None:intergenic | 25.0% |
| ! | AAAGTTTCTAATATTCTGCA+TGG | + | 32557:4995-5014 | MS.gene041602:CDS | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | + | 32557:6670-6689 | MS.gene041602:intron | 25.0% |
| ! | AATAGGAATAATTGTTGAGA+AGG | + | 32557:5590-5609 | MS.gene041602:intron | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | - | 32557:5703-5722 | None:intergenic | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | - | 32557:7211-7230 | None:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | + | 32557:6347-6366 | MS.gene041602:intron | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | + | 32557:5983-6002 | MS.gene041602:CDS | 25.0% |
| ! | ATTTGATGGAAATAATGCAT+TGG | - | 32557:5689-5708 | None:intergenic | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | - | 32557:6497-6516 | None:intergenic | 25.0% |
| ! | GATATGAAATTTCATTCTGT+CGG | + | 32557:5041-5060 | MS.gene041602:intron | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | - | 32557:6890-6909 | None:intergenic | 25.0% |
| ! | GTGTTTATATGGCATTTATT+TGG | + | 32557:5361-5380 | MS.gene041602:intron | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | + | 32557:7071-7090 | MS.gene041602:intron | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | - | 32557:6547-6566 | None:intergenic | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | + | 32557:7124-7143 | MS.gene041602:intron | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | + | 32557:7059-7078 | MS.gene041602:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | + | 32557:6716-6735 | MS.gene041602:intron | 25.0% |
| !! | TTAATAGCAGTGTTGTTAAA+TGG | + | 32557:5231-5250 | MS.gene041602:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | + | 32557:6715-6734 | MS.gene041602:intron | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | + | 32557:6547-6566 | MS.gene041602:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | - | 32557:6191-6210 | None:intergenic | 25.0% |
| !!! | GTTTAATTTGAAGCATGTTA+AGG | + | 32557:4663-4682 | MS.gene041602:intron | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | - | 32557:6192-6211 | None:intergenic | 25.0% |
| !!! | TATTATGTTATTTTGGTAGG+GGG | + | 32557:4892-4911 | MS.gene041602:intron | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | - | 32557:6347-6366 | None:intergenic | 25.0% |
| AAATTTCATTCTGTCGGTAA+TGG | + | 32557:5047-5066 | MS.gene041602:intron | 30.0% | |
| AAGAACCTAGATTCTGATAT+TGG | + | 32557:5896-5915 | MS.gene041602:CDS | 30.0% | |
| AATAATTGTTGAGAAGGAGA+GGG | + | 32557:5596-5615 | MS.gene041602:intron | 30.0% | |
| AATTAGTAGGGTACATACAT+TGG | + | 32557:5110-5129 | MS.gene041602:intron | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | + | 32557:7632-7651 | MS.gene041602:CDS | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | - | 32557:7900-7919 | None:intergenic | 30.0% | |
| AGTTAAAATCTTGTCATGGA+TGG | + | 32557:6351-6370 | MS.gene041602:intron | 30.0% | |
| ATCAGCAATACTACTTAAGA+GGG | + | 32557:5393-5412 | MS.gene041602:intron | 30.0% | |
| CAATATAAATTTGACACGGT+AGG | + | 32557:7351-7370 | MS.gene041602:intron | 30.0% | |
| CCTGAAAATGAGTTTATAAG+TGG | + | 32557:5499-5518 | MS.gene041602:intron | 30.0% | |
| CGTCTACATAATGAAAATGT+GGG | - | 32557:6788-6807 | None:intergenic | 30.0% | |
| CTAACTCAACATTACAAAAC+CGG | - | 32557:5547-5566 | None:intergenic | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | + | 32557:5902-5921 | MS.gene041602:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | - | 32557:6548-6567 | None:intergenic | 30.0% | |
| GCAGACTCATTAACAAATAT+CGG | - | 32557:5839-5858 | None:intergenic | 30.0% | |
| GGTATTATTCAGTAAGACAA+TGG | + | 32557:5068-5087 | MS.gene041602:intron | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | + | 32557:5903-5922 | MS.gene041602:CDS | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | - | 32557:6789-6808 | None:intergenic | 30.0% | |
| TCTTGGATCTCAAATATCTA+GGG | + | 32557:5634-5653 | MS.gene041602:intron | 30.0% | |
| TTAAACATGTTTGAGGGAAT+GGG | + | 32557:5205-5224 | MS.gene041602:intron | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | - | 32557:7040-7059 | None:intergenic | 30.0% | |
| TTTAAACATGTTTGAGGGAA+TGG | + | 32557:5204-5223 | MS.gene041602:intron | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | - | 32557:5502-5521 | None:intergenic | 30.0% |
| ! | CTTTACTAAGTCTTATGAGA+AGG | + | 32557:6546-6565 | MS.gene041602:intron | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | + | 32557:6717-6736 | MS.gene041602:intron | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | + | 32557:6548-6567 | MS.gene041602:intron | 30.0% |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | + | 32557:5718-5737 | MS.gene041602:intron | 30.0% |
| !! | GTTAATTTGCATACATGACA+AGG | - | 32557:7189-7208 | None:intergenic | 30.0% |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | + | 32557:6044-6063 | MS.gene041602:CDS | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | - | 32557:6190-6209 | None:intergenic | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | + | 32557:7997-8016 | MS.gene041602:intron | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | + | 32557:5722-5741 | MS.gene041602:intron | 30.0% |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | + | 32557:7987-8006 | MS.gene041602:intron | 30.0% |
| AAATCATGGTGAGGTTAAAC+AGG | + | 32557:7133-7152 | MS.gene041602:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | - | 32557:5827-5846 | None:intergenic | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | + | 32557:7366-7385 | MS.gene041602:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | + | 32557:7595-7614 | MS.gene041602:CDS | 35.0% | |
| AGATAGGCCGAATATGATAA+GGG | - | 32557:6331-6350 | None:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | - | 32557:6654-6673 | None:intergenic | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | + | 32557:5989-6008 | MS.gene041602:CDS | 35.0% | |
| ATAATTGTTGAGAAGGAGAG+GGG | + | 32557:5597-5616 | MS.gene041602:intron | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | + | 32557:7515-7534 | MS.gene041602:intron | 35.0% | |
| CAGAATGTGAACTTCTCAAA+TGG | + | 32557:4773-4792 | MS.gene041602:CDS | 35.0% | |
| CATCAGCAATACTACTTAAG+AGG | + | 32557:5392-5411 | MS.gene041602:intron | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | + | 32557:5901-5920 | MS.gene041602:CDS | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | - | 32557:5904-5923 | None:intergenic | 35.0% | |
| CTCTTAAGTAGTATTGCTGA+TGG | - | 32557:5394-5413 | None:intergenic | 35.0% | |
| CTTCTGATACTTTCTCTTCT+GGG | + | 32557:4478-4497 | MS.gene041602:CDS | 35.0% | |
| CTTGGATCTCAAATATCTAG+GGG | + | 32557:5635-5654 | MS.gene041602:intron | 35.0% | |
| GAATAATTGTTGAGAAGGAG+AGG | + | 32557:5595-5614 | MS.gene041602:intron | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | + | 32557:7381-7400 | MS.gene041602:intron | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | + | 32557:7904-7923 | MS.gene041602:intron | 35.0% | |
| GATGGTAAAATCAATGTCTC+TGG | + | 32557:6752-6771 | MS.gene041602:CDS | 35.0% | |
| GCCACAATGATGTGTTTATA+TGG | + | 32557:5350-5369 | MS.gene041602:intron | 35.0% | |
| GCCATATAAACACATCATTG+TGG | - | 32557:5354-5373 | None:intergenic | 35.0% | |
| GTCTTGGATCTCAAATATCT+AGG | + | 32557:5633-5652 | MS.gene041602:intron | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | + | 32557:6354-6373 | MS.gene041602:intron | 35.0% | |
| TAAATATGATAGGCCTTCTG+AGG | + | 32557:6153-6172 | MS.gene041602:CDS | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | - | 32557:6332-6351 | None:intergenic | 35.0% | |
| TCTCAAATGGTATGTTCAAG+AGG | + | 32557:4786-4805 | MS.gene041602:CDS | 35.0% | |
| TGAAGTCATTCTCAAAGGTT+TGG | + | 32557:6968-6987 | MS.gene041602:intron | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | + | 32557:7452-7471 | MS.gene041602:CDS | 35.0% | |
| TTAAGTAGTATTGCTGATGG+CGG | - | 32557:5391-5410 | None:intergenic | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | + | 32557:7605-7624 | MS.gene041602:CDS | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | - | 32557:6535-6554 | None:intergenic | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | - | 32557:7897-7916 | None:intergenic | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | + | 32557:7641-7660 | MS.gene041602:CDS | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | - | 32557:7469-7488 | None:intergenic | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | + | 32557:6963-6982 | MS.gene041602:CDS | 35.0% |
| ! | GTTTGGTTCGTCTACATAAT+TGG | + | 32557:6985-7004 | MS.gene041602:intron | 35.0% |
| ! | TACATGAATTTGAAGCCACT+CGG | + | 32557:6210-6229 | MS.gene041602:intron | 35.0% |
| ! | TTGATTTTACCATCGCTCTT+TGG | - | 32557:6746-6765 | None:intergenic | 35.0% |
| ! | TTTTTCTGCTCAACCTGTTT+TGG | + | 32557:4693-4712 | MS.gene041602:CDS | 35.0% |
| !! | CGGTTTTGTAATGTTGAGTT+AGG | + | 32557:5545-5564 | MS.gene041602:intron | 35.0% |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | + | 32557:6043-6062 | MS.gene041602:CDS | 35.0% |
| !! | CTTAAGAGGGTTAGTTAGTT+AGG | + | 32557:5406-5425 | MS.gene041602:intron | 35.0% |
| AAACACATCATTGTGGCCTA+TGG | - | 32557:5347-5366 | None:intergenic | 40.0% | |
| AAATGCAACACGAGTAACTC+TGG | - | 32557:8096-8115 | None:intergenic | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | - | 32557:7717-7736 | None:intergenic | 40.0% | |
| AAGTATCAGAAGCAGAGAGA+CGG | - | 32557:4470-4489 | None:intergenic | 40.0% | |
| ACACAACATTGGAATTGCGA+TGG | + | 32557:7392-7411 | MS.gene041602:CDS | 40.0% | |
| ACTCACATCTATGCGAGAAT+TGG | - | 32557:4556-4575 | None:intergenic | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | + | 32557:7555-7574 | MS.gene041602:intron | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | + | 32557:7644-7663 | MS.gene041602:CDS | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | - | 32557:6690-6709 | None:intergenic | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | + | 32557:7505-7524 | MS.gene041602:intron | 40.0% | |
| ATCCCTTCACAAATTGCCTA+TGG | - | 32557:5308-5327 | None:intergenic | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | - | 32557:7698-7717 | None:intergenic | 40.0% | |
| CACCATAGGCAATTTGTGAA+GGG | + | 32557:5303-5322 | MS.gene041602:intron | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | - | 32557:7699-7718 | None:intergenic | 40.0% | |
| CTCACATCTATGCGAGAATT+GGG | - | 32557:4555-4574 | None:intergenic | 40.0% | |
| GAAATTACGAGTCGCTACAA+AGG | + | 32557:4971-4990 | MS.gene041602:CDS | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | + | 32557:7698-7717 | MS.gene041602:CDS | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | - | 32557:6330-6349 | None:intergenic | 40.0% | |
| GCATTCTTCACTCTACAAAC+CGG | + | 32557:5525-5544 | MS.gene041602:intron | 40.0% | |
| GCTTCTGATACTTTCTCTTC+TGG | + | 32557:4477-4496 | MS.gene041602:CDS | 40.0% | |
| GGTTTAAAAATCAGCAGGAC+AGG | + | 32557:6384-6403 | MS.gene041602:intron | 40.0% | |
| GTACATACATTGGTGTGAGA+GGG | + | 32557:5120-5139 | MS.gene041602:intron | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | - | 32557:6864-6883 | None:intergenic | 40.0% | |
| TAAAGACCTTGGTCATGAGA+AGG | + | 32557:6681-6700 | MS.gene041602:intron | 40.0% | |
| TACATACATTGGTGTGAGAG+GGG | + | 32557:5121-5140 | MS.gene041602:intron | 40.0% | |
| TCACTTTGAACTTCACAGAG+TGG | - | 32557:4938-4957 | None:intergenic | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | + | 32557:7455-7474 | MS.gene041602:CDS | 40.0% | |
| TCCTGTCCCCTTATCATATT+CGG | + | 32557:6321-6340 | MS.gene041602:intron | 40.0% | |
| TCTAATATTCTGCATGGTCC+TGG | + | 32557:5001-5020 | MS.gene041602:CDS | 40.0% | |
| TCTATGCGAGAATTGGGTTT+AGG | - | 32557:4549-4568 | None:intergenic | 40.0% | |
| TGAAACAGAGGAATGGTAAG+AGG | - | 32557:4511-4530 | None:intergenic | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | + | 32557:6003-6022 | MS.gene041602:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | + | 32557:5939-5958 | MS.gene041602:CDS | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | - | 32557:6936-6955 | None:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | - | 32557:7740-7759 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGAAACAGAGGAA+TGG | - | 32557:4518-4537 | None:intergenic | 40.0% |
| ! | AGGTCTTATCTCAGCAAATG+TGG | - | 32557:5482-5501 | None:intergenic | 40.0% |
| ! | CAGAAAAGAGTGTGAAACAG+AGG | - | 32557:4523-4542 | None:intergenic | 40.0% |
| ! | CAGAGAAGAGCTTTGATCTA+CGG | + | 32557:4432-4451 | MS.gene041602:CDS | 40.0% |
| ! | GAACATAGTTGATGTCCCTT+TGG | + | 32557:4729-4748 | MS.gene041602:CDS | 40.0% |
| ! | GTGTTGTTAAATGGCCACAA+TGG | + | 32557:5240-5259 | MS.gene041602:intron | 40.0% |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | + | 32557:6552-6571 | MS.gene041602:intron | 40.0% |
| ! | TTGCAAGATTTTGCAACGAG+TGG | + | 32557:8052-8071 | MS.gene041602:CDS | 40.0% |
| ! | TTTGAAGCAACTGTTCACAG+AGG | - | 32557:6937-6956 | None:intergenic | 40.0% |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | + | 32557:6379-6398 | MS.gene041602:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | + | 32557:6100-6119 | MS.gene041602:CDS | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | + | 32557:7162-7181 | MS.gene041602:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | + | 32557:6099-6118 | MS.gene041602:CDS | 40.0% |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | + | 32557:6085-6104 | MS.gene041602:CDS | 40.0% |
| AAAGTCGTTGAAGGACATGC+AGG | - | 32557:5779-5798 | None:intergenic | 45.0% | |
| AACAGAGGAATGGTAAGAGG+AGG | - | 32557:4508-4527 | None:intergenic | 45.0% | |
| ACAAGGACCAAAGAGCCAAT+AGG | - | 32557:7172-7191 | None:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | - | 32557:7683-7702 | None:intergenic | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | + | 32557:7608-7627 | MS.gene041602:CDS | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | + | 32557:5914-5933 | MS.gene041602:CDS | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | + | 32557:5302-5321 | MS.gene041602:intron | 45.0% | |
| CCTTCACAAATTGCCTATGG+TGG | - | 32557:5305-5324 | None:intergenic | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | + | 32557:7697-7716 | MS.gene041602:CDS | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | + | 32557:6806-6825 | MS.gene041602:CDS | 45.0% | |
| CGTAGATCAAAGCTCTTCTC+TGG | - | 32557:4434-4453 | None:intergenic | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | - | 32557:7770-7789 | None:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | - | 32557:7682-7701 | None:intergenic | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | + | 32557:7720-7739 | MS.gene041602:CDS | 45.0% | |
| GAGTCACCAAAAGTCGTTGA+AGG | - | 32557:5788-5807 | None:intergenic | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | + | 32557:6809-6828 | MS.gene041602:CDS | 45.0% | |
| GCTAGCAAGGTTGCAACAAT+TGG | + | 32557:7568-7587 | MS.gene041602:CDS | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | + | 32557:7653-7672 | MS.gene041602:CDS | 45.0% | |
| GGGTTCATTTGGTAGAGTCT+TGG | + | 32557:5617-5636 | MS.gene041602:intron | 45.0% | |
| GGTACATACATTGGTGTGAG+AGG | + | 32557:5119-5138 | MS.gene041602:intron | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | + | 32557:5998-6017 | MS.gene041602:CDS | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | + | 32557:6002-6021 | MS.gene041602:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | + | 32557:7609-7628 | MS.gene041602:CDS | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | - | 32557:6082-6101 | None:intergenic | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | - | 32557:6935-6954 | None:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | + | 32557:5952-5971 | MS.gene041602:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | - | 32557:7615-7634 | None:intergenic | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | - | 32557:7681-7700 | None:intergenic | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | - | 32557:5953-5972 | None:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | + | 32557:5779-5798 | MS.gene041602:CDS | 45.0% |
| ! | GCTTTTCTGTCAACCACCAT+AGG | + | 32557:5289-5308 | MS.gene041602:intron | 45.0% |
| ! | GGTTGCACTCATTAGCCTAT+TGG | + | 32557:7154-7173 | MS.gene041602:intron | 45.0% |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | - | 32557:7564-7583 | None:intergenic | 45.0% |
| !! | ACCTGTTTTGGACATTCCTG+CGG | + | 32557:4705-4724 | MS.gene041602:CDS | 45.0% |
| ACATCAACTATGTTCCCCGC+AGG | - | 32557:4724-4743 | None:intergenic | 50.0% | |
| ACATTGGTGTGAGAGGGGTT+GGG | + | 32557:5126-5145 | MS.gene041602:intron | 50.0% | |
| AGGACACGATACTTCCCCTT+AGG | + | 32557:6173-6192 | MS.gene041602:CDS | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | + | 32557:5959-5978 | MS.gene041602:CDS | 50.0% | |
| ATTGCGATGGCAACACCACA+TGG | + | 32557:7405-7424 | MS.gene041602:CDS | 50.0% | |
| CAGAGAGACGGAACAATCTC+TGG | - | 32557:4458-4477 | None:intergenic | 50.0% | |
| CTCTTCTCTGGCAAATCCGA+CGG | - | 32557:4422-4441 | None:intergenic | 50.0% | |
| CTGACCTTTACAATGTCGCC+AGG | - | 32557:5022-5041 | None:intergenic | 50.0% | |
| CTTCACCAGTCTGTGCCAAA+GGG | - | 32557:4747-4766 | None:intergenic | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | + | 32557:6109-6128 | MS.gene041602:CDS | 50.0% | |
| GAGAAGGAGAGGGGTTCATT+TGG | + | 32557:5606-5625 | MS.gene041602:intron | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | + | 32557:8021-8040 | MS.gene041602:CDS | 50.0% | |
| GCCGAATATGATAAGGGGAC+AGG | - | 32557:6325-6344 | None:intergenic | 50.0% | |
| GGCAATTTGTGAAGGGATGC+TGG | + | 32557:5310-5329 | MS.gene041602:intron | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | + | 32557:7734-7753 | MS.gene041602:CDS | 50.0% | |
| TACATTGGTGTGAGAGGGGT+TGG | + | 32557:5125-5144 | MS.gene041602:intron | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | + | 32557:6734-6753 | MS.gene041602:intron | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | + | 32557:6359-6378 | MS.gene041602:intron | 50.0% | |
| TGGTCCTGGCGACATTGTAA+AGG | + | 32557:5015-5034 | MS.gene041602:CDS | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | + | 32557:8017-8036 | MS.gene041602:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | - | 32557:7423-7442 | None:intergenic | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | + | 32557:6217-6236 | MS.gene041602:intron | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | + | 32557:6218-6237 | MS.gene041602:intron | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | - | 32557:6827-6846 | None:intergenic | 50.0% |
| !! | AGTAGTATTGCTGATGGCGG+AGG | - | 32557:5388-5407 | None:intergenic | 50.0% |
| !! | CCTGTTTTGGACATTCCTGC+GGG | + | 32557:4706-4725 | MS.gene041602:CDS | 50.0% |
| !! | CGACGTTTTAAGCTCCACCA+GGG | - | 32557:6826-6845 | None:intergenic | 50.0% |
| !! | CTGTTTTGGACATTCCTGCG+GGG | + | 32557:4707-4726 | MS.gene041602:CDS | 50.0% |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | - | 32557:6169-6188 | None:intergenic | 50.0% |
| CCCGCAGGAATGTCCAAAAC+AGG | - | 32557:4709-4728 | None:intergenic | 55.0% | |
| CCTTCACCAGTCTGTGCCAA+AGG | - | 32557:4748-4767 | None:intergenic | 55.0% | |
| CCTTTGGCACAGACTGGTGA+AGG | + | 32557:4745-4764 | MS.gene041602:CDS | 55.0% | |
| CTCTTATCCCTGCTACCGAG+TGG | - | 32557:6228-6247 | None:intergenic | 55.0% | |
| GATGTCCCTTTGGCACAGAC+TGG | + | 32557:4739-4758 | MS.gene041602:CDS | 55.0% | |
| GTCACGCCATTCCTCCATAG+CGG | - | 32557:5268-5287 | None:intergenic | 55.0% | |
| TTGTGAAGGGATGCTGGCCA+TGG | + | 32557:5316-5335 | MS.gene041602:intron | 55.0% | |
| !! | ATGGTGCCGCTATGGAGGAA+TGG | + | 32557:5259-5278 | MS.gene041602:intron | 55.0% |
| CCTCCATAGCGGCACCATTG+TGG | - | 32557:5257-5276 | None:intergenic | 60.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | + | 32557:6363-6382 | MS.gene041602:intron | 60.0% | |
| TGAAGGGATGCTGGCCATGG+TGG | + | 32557:5319-5338 | MS.gene041602:intron | 60.0% | |
| TTGGTGTGAGAGGGGTTGGG+AGG | + | 32557:5129-5148 | MS.gene041602:intron | 60.0% | |
| !! | CCACAATGGTGCCGCTATGG+AGG | + | 32557:5254-5273 | MS.gene041602:intron | 60.0% |
| !! | TGGCCACAATGGTGCCGCTA+TGG | + | 32557:5251-5270 | MS.gene041602:intron | 60.0% |
| TGTGGCCTATGGCGCCACCA+TGG | - | 32557:5336-5355 | None:intergenic | 65.0% | |
| ! | GCTGGCCATGGTGGCGCCAT+AGG | + | 32557:5328-5347 | MS.gene041602:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32557 | gene | 4411 | 8122 | 4411 | ID=MS.gene041602 |
| 32557 | mRNA | 4411 | 8122 | 4411 | ID=MS.gene041602.t1;Parent=MS.gene041602 |
| 32557 | exon | 4411 | 4524 | 4411 | ID=MS.gene041602.t1.exon1;Parent=MS.gene041602.t1 |
| 32557 | CDS | 4411 | 4524 | 4411 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 4664 | 4807 | 4664 | ID=MS.gene041602.t1.exon2;Parent=MS.gene041602.t1 |
| 32557 | CDS | 4664 | 4807 | 4664 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 4911 | 5036 | 4911 | ID=MS.gene041602.t1.exon3;Parent=MS.gene041602.t1 |
| 32557 | CDS | 4911 | 5036 | 4911 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 5740 | 6194 | 5740 | ID=MS.gene041602.t1.exon4;Parent=MS.gene041602.t1 |
| 32557 | CDS | 5740 | 6194 | 5740 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 6737 | 6984 | 6737 | ID=MS.gene041602.t1.exon5;Parent=MS.gene041602.t1 |
| 32557 | CDS | 6737 | 6984 | 6737 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 7388 | 7476 | 7388 | ID=MS.gene041602.t1.exon6;Parent=MS.gene041602.t1 |
| 32557 | CDS | 7388 | 7476 | 7388 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 7557 | 7784 | 7557 | ID=MS.gene041602.t1.exon7;Parent=MS.gene041602.t1 |
| 32557 | CDS | 7557 | 7784 | 7557 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| 32557 | exon | 8009 | 8122 | 8009 | ID=MS.gene041602.t1.exon8;Parent=MS.gene041602.t1 |
| 32557 | CDS | 8009 | 8122 | 8009 | ID=cds.MS.gene041602.t1;Parent=MS.gene041602.t1 |
| Gene Sequence |
| Protein sequence |
