Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042040.t1 | XP_013458730.1 | 98.6 | 419 | 5 | 1 | 1 | 418 | 1 | 419 | 8.10E-218 | 766.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042040.t1 | Q9FUM1 | 81.0 | 422 | 76 | 2 | 1 | 418 | 1 | 422 | 1.4e-181 | 637.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042040.t1 | A0A072USZ0 | 98.6 | 419 | 5 | 1 | 1 | 418 | 1 | 419 | 5.9e-218 | 766.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042040 | MS.gene04296 | PPI |
| MS.gene042040 | MS.gene84450 | PPI |
| MS.gene042040 | MS.gene00585 | PPI |
| MS.gene042040 | MS.gene051739 | PPI |
| MS.gene042040 | MS.gene072093 | PPI |
| MS.gene042040 | MS.gene012799 | PPI |
| MS.gene94948 | MS.gene042040 | PPI |
| MS.gene042040 | MS.gene002011 | PPI |
| MS.gene95042 | MS.gene042040 | PPI |
| MS.gene047236 | MS.gene042040 | PPI |
| MS.gene042040 | MS.gene04200 | PPI |
| MS.gene042040 | MS.gene023009 | PPI |
| MS.gene042040 | MS.gene43488 | PPI |
| MS.gene042040 | MS.gene027317 | PPI |
| MS.gene042040 | MS.gene95042 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042040.t1 | MTR_4g134770 | 98.568 | 419 | 5 | 1 | 1 | 418 | 1 | 419 | 0.0 | 852 |
| MS.gene042040.t1 | MTR_4g134770 | 98.698 | 384 | 4 | 1 | 36 | 418 | 1 | 384 | 0.0 | 783 |
| MS.gene042040.t1 | MTR_3g058940 | 81.384 | 419 | 77 | 1 | 1 | 418 | 1 | 419 | 0.0 | 716 |
| MS.gene042040.t1 | MTR_2g005570 | 82.775 | 418 | 69 | 2 | 2 | 418 | 3 | 418 | 0.0 | 697 |
| MS.gene042040.t1 | MTR_2g005570 | 82.536 | 418 | 70 | 2 | 2 | 418 | 3 | 418 | 0.0 | 695 |
| MS.gene042040.t1 | MTR_1g088850 | 25.991 | 227 | 145 | 5 | 1 | 212 | 1 | 219 | 2.54e-12 | 66.2 |
| MS.gene042040.t1 | MTR_3g064700 | 33.333 | 132 | 73 | 4 | 40 | 160 | 40 | 167 | 5.04e-11 | 62.4 |
| MS.gene042040.t1 | MTR_1g026140 | 29.139 | 151 | 97 | 4 | 26 | 167 | 28 | 177 | 5.59e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042040.t1 | AT1G09640 | 75.418 | 419 | 97 | 3 | 1 | 418 | 1 | 414 | 0.0 | 636 |
| MS.gene042040.t1 | AT1G57720 | 75.418 | 419 | 96 | 4 | 1 | 418 | 1 | 413 | 0.0 | 622 |
| MS.gene042040.t1 | AT1G57720 | 75.418 | 419 | 96 | 4 | 1 | 418 | 1 | 413 | 0.0 | 622 |
| MS.gene042040.t1 | AT1G09640 | 69.118 | 204 | 62 | 1 | 1 | 203 | 1 | 204 | 1.48e-97 | 293 |
| MS.gene042040.t1 | AT1G09640 | 83.784 | 74 | 11 | 1 | 346 | 418 | 192 | 265 | 4.78e-35 | 130 |
| MS.gene042040.t1 | AT2G30870 | 31.387 | 137 | 77 | 4 | 36 | 160 | 35 | 166 | 1.62e-12 | 67.0 |
| MS.gene042040.t1 | AT3G62760 | 25.463 | 216 | 138 | 6 | 1 | 201 | 1 | 208 | 1.93e-12 | 66.6 |
Find 102 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTATCTTGCAGGATTT+TGG | 0.085089 | 8.3:-93779 | MS.gene042040:intron |
| CTCTTCTTCTGCTTCTTCTT+TGG | 0.092984 | 8.3:+94575 | None:intergenic |
| CATTCATCCATCACAAATTT+AGG | 0.098053 | 8.3:+93543 | None:intergenic |
| CACAACCCCTTTACCTTAAA+AGG | 0.198539 | 8.3:+93588 | None:intergenic |
| GGGATTCTTGGGTTTGGGCT+TGG | 0.216459 | 8.3:+94548 | None:intergenic |
| TCTTCTTCTGCTTCTTCTTT+GGG | 0.226224 | 8.3:+94576 | None:intergenic |
| GGATTCTTGGGTTTGGGCTT+GGG | 0.239221 | 8.3:+94549 | None:intergenic |
| ATCAATTAGATTCTTCATTC+TGG | 0.242038 | 8.3:-96173 | MS.gene042040:intron |
| AGAGACACCCATCTCAAAAT+TGG | 0.270995 | 8.3:+96079 | None:intergenic |
| CCAAACTTCCGCAAGATATT+AGG | 0.289841 | 8.3:-94723 | MS.gene042040:CDS |
| TTAGCCCGCAAGTATGCTTT+TGG | 0.302747 | 8.3:-93639 | MS.gene042040:CDS |
| ATTCATCCATCACAAATTTA+GGG | 0.306943 | 8.3:+93544 | None:intergenic |
| CCTAATATCTTGCGGAAGTT+TGG | 0.312009 | 8.3:+94723 | None:intergenic |
| AAGAAGATCAAGGGGATTCT+TGG | 0.325325 | 8.3:+94536 | None:intergenic |
| ATCAAGGGGATTCTTGGGTT+TGG | 0.332225 | 8.3:+94542 | None:intergenic |
| CTCTATCCAAGATTGGGATA+TGG | 0.336268 | 8.3:-95742 | MS.gene042040:CDS |
| GGTAAACGACGAACCCAAAA+AGG | 0.338365 | 8.3:-94622 | MS.gene042040:CDS |
| TCAAGGGGATTCTTGGGTTT+GGG | 0.341781 | 8.3:+94543 | None:intergenic |
| TTCCCAGCCTAAAGATTCTA+AGG | 0.359278 | 8.3:-94649 | MS.gene042040:CDS |
| GCTGAAGAGATTGCAATTAC+TGG | 0.361731 | 8.3:-94936 | MS.gene042040:CDS |
| ATCCTGAAGGGTACTCTCTC+TGG | 0.365424 | 8.3:-93746 | MS.gene042040:CDS |
| CTCTCAAAGACAGGACCATC+AGG | 0.372688 | 8.3:+95996 | None:intergenic |
| TCTATCCAAGATTGGGATAT+GGG | 0.385860 | 8.3:-95741 | MS.gene042040:CDS |
| AAGCATTCAAAGCTCTCTTC+AGG | 0.386435 | 8.3:+94913 | None:intergenic |
| CTTTCCAAAAGCATACTTGC+GGG | 0.392465 | 8.3:+93635 | None:intergenic |
| TCCTCCAAGCAAGATGATAC+TGG | 0.393435 | 8.3:-94514 | MS.gene042040:CDS |
| TCTTGGCAAGGTTCCTGTCT+TGG | 0.398617 | 8.3:-96024 | MS.gene042040:CDS |
| GAGACACCCATCTCAAAATT+GGG | 0.399343 | 8.3:+96080 | None:intergenic |
| CTCAACAACAACACCTTGTA+TGG | 0.403217 | 8.3:-95945 | MS.gene042040:CDS |
| CTCATGTCGAGAGATACTTT+TGG | 0.403977 | 8.3:-94761 | MS.gene042040:CDS |
| CAGCTTCAGCCTGCTTGACT+TGG | 0.404975 | 8.3:+94700 | None:intergenic |
| TAAACCCCATATCCCAATCT+TGG | 0.413330 | 8.3:+95736 | None:intergenic |
| AGAAGATCAAGGGGATTCTT+GGG | 0.421200 | 8.3:+94537 | None:intergenic |
| CAAGTGGCTCTATCCAAGAT+TGG | 0.421551 | 8.3:-95749 | MS.gene042040:CDS |
| AACCAGAGAGAGTACCCTTC+AGG | 0.429409 | 8.3:+93744 | None:intergenic |
| CATCTCAGATGAAGCTCAAA+AGG | 0.452428 | 8.3:-93484 | MS.gene042040:CDS |
| GATCGACCCTAATATGGCTT+TGG | 0.467819 | 8.3:-96272 | None:intergenic |
| TGGCCTTAGAATCTTTAGGC+TGG | 0.476785 | 8.3:+94646 | None:intergenic |
| CAAAGAAGAAGCAGAAGAAG+AGG | 0.479600 | 8.3:-94574 | MS.gene042040:CDS |
| GCCTCCAATACTTACCTAGT+TGG | 0.484176 | 8.3:-94876 | MS.gene042040:CDS |
| AAGTGGCTCTATCCAAGATT+GGG | 0.485075 | 8.3:-95748 | MS.gene042040:CDS |
| TTTGGGTTCGTCGTTTACCT+TGG | 0.489504 | 8.3:+94626 | None:intergenic |
| CCATCAGGGGTTTCCAAGAC+AGG | 0.490090 | 8.3:+96011 | None:intergenic |
| ACGACATGCAATTTGTATGT+TGG | 0.496799 | 8.3:-94825 | MS.gene042040:CDS |
| TGGTGGATTTCTTCAGCGGA+TGG | 0.498176 | 8.3:-93664 | MS.gene042040:CDS |
| GCAAGATGATACTGGATGAC+TGG | 0.502140 | 8.3:-94506 | MS.gene042040:CDS |
| TTAGAATCTTTAGGCTGGGA+AGG | 0.503743 | 8.3:+94651 | None:intergenic |
| ACCTTGGCCTTAGAATCTTT+AGG | 0.503994 | 8.3:+94642 | None:intergenic |
| TCCAGTATCATCTTGCTTGG+AGG | 0.510179 | 8.3:+94513 | None:intergenic |
| TCATCCAGTATCATCTTGCT+TGG | 0.513427 | 8.3:+94510 | None:intergenic |
| TTTCTCGACATGAATCCTCT+TGG | 0.518699 | 8.3:-96041 | MS.gene042040:CDS |
| ATAGCATTGCTCTCAAAGAC+AGG | 0.521702 | 8.3:+95987 | None:intergenic |
| GCCTAAAGATTCTAAGGCCA+AGG | 0.527634 | 8.3:-94643 | MS.gene042040:CDS |
| GTGGCCAACTAGGTAAGTAT+TGG | 0.528399 | 8.3:+94872 | None:intergenic |
| TTCAGAGAGGTTGCTATCAA+AGG | 0.531471 | 8.3:-94453 | MS.gene042040:intron |
| GATATTAGGCCAAGTCAAGC+AGG | 0.533721 | 8.3:-94709 | MS.gene042040:CDS |
| GCCAACTAGGTAAGTATTGG+AGG | 0.535307 | 8.3:+94875 | None:intergenic |
| CCTGTCTTGGAAACCCCTGA+TGG | 0.535349 | 8.3:-96011 | MS.gene042040:CDS |
| GGATTCATGTCGAGAAATTG+AGG | 0.540187 | 8.3:+96047 | None:intergenic |
| AGAGAAGACTTACTGGAGGA+AGG | 0.545703 | 8.3:+95713 | None:intergenic |
| GGCCTTAGAATCTTTAGGCT+GGG | 0.546742 | 8.3:+94647 | None:intergenic |
| AGAAATCCCTAAATTTGTGA+TGG | 0.546910 | 8.3:-93550 | MS.gene042040:CDS |
| ATGTCGTTATGATGTCAGCC+AGG | 0.547555 | 8.3:+94841 | None:intergenic |
| GGGTGACAGAGTGGCCAACT+AGG | 0.557957 | 8.3:+94862 | None:intergenic |
| CGACATGAATCCTCTTGGCA+AGG | 0.562703 | 8.3:-96036 | MS.gene042040:CDS |
| ATGACATGGAGCTGTATGAA+TGG | 0.563205 | 8.3:-93518 | MS.gene042040:CDS |
| CTAGGTAAGTATTGGAGGCA+AGG | 0.570319 | 8.3:+94880 | None:intergenic |
| TTTGGAAAGATGCTTGTGAT+CGG | 0.574318 | 8.3:-93621 | MS.gene042040:CDS |
| TGCTTGGAGGAAGAAGATCA+AGG | 0.574810 | 8.3:+94526 | None:intergenic |
| GCTTGGAGGAAGAAGATCAA+GGG | 0.576087 | 8.3:+94527 | None:intergenic |
| ATTTAGGGATTTCTTGCCCA+CGG | 0.579224 | 8.3:+93559 | None:intergenic |
| TGGGACATGTATGATCCTGA+AGG | 0.580791 | 8.3:-93759 | MS.gene042040:CDS |
| GTGACATTGAACAAGGTTGG+TGG | 0.584238 | 8.3:-93681 | MS.gene042040:CDS |
| GGCTTCTTTGCAGATTGAAG+AGG | 0.584689 | 8.3:+94672 | None:intergenic |
| TTTGTGACATTGAACAAGGT+TGG | 0.585414 | 8.3:-93684 | MS.gene042040:CDS |
| AGGTTGGTGGATTTCTTCAG+CGG | 0.591058 | 8.3:-93668 | MS.gene042040:CDS |
| TGACTTGGCCTAATATCTTG+CGG | 0.591227 | 8.3:+94715 | None:intergenic |
| TCTTTCCAAAAGCATACTTG+CGG | 0.593669 | 8.3:+93634 | None:intergenic |
| TTGATTCTAATATTAACAAG+TGG | 0.595616 | 8.3:-95765 | MS.gene042040:CDS |
| GAAGTTTGGCTGATTGACCA+AGG | 0.597999 | 8.3:+94737 | None:intergenic |
| AGTTGGCCACTCTGTCACCC+TGG | 0.598292 | 8.3:-94859 | MS.gene042040:CDS |
| TTCAGGCTCACATTGAACAA+TGG | 0.606079 | 8.3:-95810 | MS.gene042040:intron |
| CTATCCAAGATTGGGATATG+GGG | 0.607195 | 8.3:-95740 | MS.gene042040:CDS |
| GGGACATGTATGATCCTGAA+GGG | 0.608052 | 8.3:-93758 | MS.gene042040:CDS |
| AATATTAGAATCAATCTCCA+AGG | 0.612021 | 8.3:+95774 | None:intergenic |
| CAAAAGTATCTCTCGACATG+AGG | 0.612573 | 8.3:+94762 | None:intergenic |
| AATCAAAGAAGAACCATACA+AGG | 0.618859 | 8.3:+95932 | None:intergenic |
| TCTCAAAGACAGGACCATCA+GGG | 0.621025 | 8.3:+95997 | None:intergenic |
| CTTGGAGGAAGAAGATCAAG+GGG | 0.623330 | 8.3:+94528 | None:intergenic |
| AGACACCCATCTCAAAATTG+GGG | 0.627541 | 8.3:+96081 | None:intergenic |
| CTCAAAGACAGGACCATCAG+GGG | 0.627628 | 8.3:+95998 | None:intergenic |
| TTCCTTTGTGACATTGAACA+AGG | 0.627797 | 8.3:-93688 | MS.gene042040:CDS |
| AACCCCTTTACCTTAAAAGG+TGG | 0.642602 | 8.3:+93591 | None:intergenic |
| AAGCACTTGGCATCCAACAG+AGG | 0.653957 | 8.3:+93414 | None:intergenic |
| AAGACAGGAACCTTGCCAAG+AGG | 0.659474 | 8.3:+96026 | None:intergenic |
| TGTCAGCCAGGGTGACAGAG+TGG | 0.662886 | 8.3:+94853 | None:intergenic |
| AACCTTGTTCAATGTCACAA+AGG | 0.664832 | 8.3:+93686 | None:intergenic |
| CTCGACATGAGGAAACTCTG+AGG | 0.687154 | 8.3:+94773 | None:intergenic |
| TGTCGTTATGATGTCAGCCA+GGG | 0.694507 | 8.3:+94842 | None:intergenic |
| GACACCCATCTCAAAATTGG+GGG | 0.708142 | 8.3:+96082 | None:intergenic |
| GGAGCTGTATGAATGGACAA+AGG | 0.712876 | 8.3:-93511 | MS.gene042040:CDS |
| GATGGATGAATGCTATGACA+TGG | 0.718496 | 8.3:-93532 | MS.gene042040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACATATGCAAATATA+AGG | - | chr8.3:95453-95472 | MS.gene042040:intron | 15.0% |
| !! | CAAAGAAAAAAATATTTGTT+GGG | - | chr8.3:94358-94377 | MS.gene042040:intron | 15.0% |
| !! | GTAGCTAAATATATATTATT+GGG | - | chr8.3:94305-94324 | MS.gene042040:intron | 15.0% |
| !! | TCAAAGAAAAAAATATTTGT+TGG | - | chr8.3:94357-94376 | MS.gene042040:intron | 15.0% |
| !!! | AAAGAAAAAAATATTTGTTG+GGG | - | chr8.3:94359-94378 | MS.gene042040:intron | 15.0% |
| !!! | ATCTAATTGATTTGATAATT+AGG | + | chr8.3:93484-93503 | None:intergenic | 15.0% |
| !!! | TCTAATTGATTTGATAATTA+GGG | + | chr8.3:93483-93502 | None:intergenic | 15.0% |
| !!! | TTAAACAAGTGAATATATTT+TGG | - | chr8.3:94239-94258 | MS.gene042040:intron | 15.0% |
| !! | AAAAATGAAAAAAATCAGCT+TGG | - | chr8.3:95726-95745 | MS.gene042040:CDS | 20.0% |
| !! | AAAATGAAAAAAATCAGCTT+GGG | - | chr8.3:95727-95746 | MS.gene042040:CDS | 20.0% |
| !! | ATTGAAAACAATAACATCAA+AGG | + | chr8.3:95256-95275 | None:intergenic | 20.0% |
| !! | GGTAGCTAAATATATATTAT+TGG | - | chr8.3:94304-94323 | MS.gene042040:intron | 20.0% |
| !! | TTGAAAACAATAACATCAAA+GGG | + | chr8.3:95255-95274 | None:intergenic | 20.0% |
| !! | TTGATTCTAATATTAACAAG+TGG | - | chr8.3:93901-93920 | MS.gene042040:intron | 20.0% |
| !!! | GATTTTTATAAGACATACAT+AGG | - | chr8.3:95848-95867 | MS.gene042040:intron | 20.0% |
| !!! | TTTAAAATAAGTTTGGGATA+CGG | + | chr8.3:94055-94074 | None:intergenic | 20.0% |
| ! | AAATTTCACAATGTACAATC+AGG | + | chr8.3:95795-95814 | None:intergenic | 25.0% |
| ! | AATATTAGAATCAATCTCCA+AGG | + | chr8.3:93895-93914 | None:intergenic | 25.0% |
| ! | AATCAACAAAAATGCTTACA+AGG | - | chr8.3:93519-93538 | MS.gene042040:CDS | 25.0% |
| ! | AATTTCACAATGTACAATCA+GGG | + | chr8.3:95794-95813 | None:intergenic | 25.0% |
| ! | ACTATGAGTACCAAATATTT+AGG | + | chr8.3:95509-95528 | None:intergenic | 25.0% |
| ! | ATCAATTAGATTCTTCATTC+TGG | - | chr8.3:93493-93512 | MS.gene042040:CDS | 25.0% |
| ! | ATTCATCCATCACAAATTTA+GGG | + | chr8.3:96125-96144 | None:intergenic | 25.0% |
| ! | ATTGTACATTGTGAAATTTG+CGG | - | chr8.3:95796-95815 | MS.gene042040:CDS | 25.0% |
| ! | CTATGAGTACCAAATATTTA+GGG | + | chr8.3:95508-95527 | None:intergenic | 25.0% |
| ! | TAAAGTATATGTGTCAGATT+TGG | + | chr8.3:94536-94555 | None:intergenic | 25.0% |
| ! | TCAGTTCAATGTTTCATATA+TGG | - | chr8.3:95697-95716 | MS.gene042040:intron | 25.0% |
| ! | TCATAGAAATAAACCAACTT+GGG | + | chr8.3:94476-94495 | None:intergenic | 25.0% |
| ! | TGAAAACAATAACATCAAAG+GGG | + | chr8.3:95254-95273 | None:intergenic | 25.0% |
| ! | TGTCAAAAATCAGTAGAAAT+AGG | + | chr8.3:94269-94288 | None:intergenic | 25.0% |
| ! | TTAATTATTTGTCTGGATGA+AGG | - | chr8.3:94708-94727 | MS.gene042040:CDS | 25.0% |
| ! | TTCAATGTTTCATATATGGA+GGG | - | chr8.3:95701-95720 | MS.gene042040:intron | 25.0% |
| ! | TTCATAGAAATAAACCAACT+TGG | + | chr8.3:94477-94496 | None:intergenic | 25.0% |
| !! | TTGACAAATAAACTCTTTTG+CGG | - | chr8.3:94283-94302 | MS.gene042040:intron | 25.0% |
| !! | TTGATTTGATAATTAGGGTT+AGG | + | chr8.3:93478-93497 | None:intergenic | 25.0% |
| !!! | TTATGTGTGTTTGTTGTTAT+GGG | + | chr8.3:95485-95504 | None:intergenic | 25.0% |
| AATCAAAGAAGAACCATACA+AGG | + | chr8.3:93737-93756 | None:intergenic | 30.0% | |
| AGAAATCCCTAAATTTGTGA+TGG | - | chr8.3:96116-96135 | MS.gene042040:CDS | 30.0% | |
| ATTTCACAATGTACAATCAG+GGG | + | chr8.3:95793-95812 | None:intergenic | 30.0% | |
| CACACATAACCCTAAATATT+TGG | - | chr8.3:95496-95515 | MS.gene042040:intron | 30.0% | |
| CATTCATCCATCACAAATTT+AGG | + | chr8.3:96126-96145 | None:intergenic | 30.0% | |
| CCAGACAAATAATTAAGATC+AGG | + | chr8.3:94704-94723 | None:intergenic | 30.0% | |
| CCTGATCTTAATTATTTGTC+TGG | - | chr8.3:94701-94720 | MS.gene042040:CDS | 30.0% | |
| GAAAACAATAACATCAAAGG+GGG | + | chr8.3:95253-95272 | None:intergenic | 30.0% | |
| GAAATCATATGTAGAAACCA+TGG | + | chr8.3:95618-95637 | None:intergenic | 30.0% | |
| GATGAATGAAAAGAGTAGTA+GGG | + | chr8.3:93429-93448 | None:intergenic | 30.0% | |
| GTAAATAAACCTATGAAGCA+CGG | + | chr8.3:94631-94650 | None:intergenic | 30.0% | |
| GTTCAATGTTTCATATATGG+AGG | - | chr8.3:95700-95719 | MS.gene042040:intron | 30.0% | |
| TTTAAATCCTTCTATCTTGC+AGG | - | chr8.3:95880-95899 | MS.gene042040:intron | 30.0% | |
| ! | AAGATTTTGAACCTTTTGAG+GGG | - | chr8.3:96226-96245 | MS.gene042040:intron | 30.0% |
| ! | ATCTTTTTCCTTTCTTACCA+TGG | - | chr8.3:95598-95617 | MS.gene042040:intron | 30.0% |
| ! | GAAGATTTTGAACCTTTTGA+GGG | - | chr8.3:96225-96244 | MS.gene042040:intron | 30.0% |
| ! | GATTTCTTCTTCTTTTCTAC+TGG | - | chr8.3:95632-95651 | MS.gene042040:intron | 30.0% |
| ! | TGAAGATTTTGAACCTTTTG+AGG | - | chr8.3:96224-96243 | MS.gene042040:intron | 30.0% |
| ! | TGATTTTCTCACATTGTTAG+CGG | - | chr8.3:94568-94587 | MS.gene042040:CDS | 30.0% |
| !! | AGAAAAGAAAAGTATTGCAG+CGG | + | chr8.3:95545-95564 | None:intergenic | 30.0% |
| !! | ATGGATTGATTTTTCATCCT+TGG | - | chr8.3:93875-93894 | MS.gene042040:intron | 30.0% |
| !! | GTTATGTGTGTTTGTTGTTA+TGG | + | chr8.3:95486-95505 | None:intergenic | 30.0% |
| !! | TGGTTTATTTCTATGAAGCA+CGG | - | chr8.3:94480-94499 | MS.gene042040:CDS | 30.0% |
| AACCTTGTTCAATGTCACAA+AGG | + | chr8.3:95983-96002 | None:intergenic | 35.0% | |
| ACGACATGCAATTTGTATGT+TGG | - | chr8.3:94841-94860 | MS.gene042040:CDS | 35.0% | |
| ATTAGATCAGATCGATGAAG+TGG | + | chr8.3:93451-93470 | None:intergenic | 35.0% | |
| CAAAATTCACTCGCTACAAA+CGG | + | chr8.3:95393-95412 | None:intergenic | 35.0% | |
| CACTAAAAACAACTTCAGAG+AGG | - | chr8.3:95200-95219 | MS.gene042040:intron | 35.0% | |
| CTTAAGATTCTCTGACATGA+GGG | + | chr8.3:94421-94440 | None:intergenic | 35.0% | |
| GGAAAAAGATGAAGAAACCA+TGG | + | chr8.3:95588-95607 | None:intergenic | 35.0% | |
| GGATGAATGAAAAGAGTAGT+AGG | + | chr8.3:93430-93449 | None:intergenic | 35.0% | |
| TCAGTGTATGGAAAATGTTG+AGG | + | chr8.3:93979-93998 | None:intergenic | 35.0% | |
| TCTAAATCGAGTTCAGTGTA+TGG | + | chr8.3:93991-94010 | None:intergenic | 35.0% | |
| TCTATCCAAGATTGGGATAT+GGG | - | chr8.3:93925-93944 | MS.gene042040:intron | 35.0% | |
| TCTTAAGATTCTCTGACATG+AGG | + | chr8.3:94422-94441 | None:intergenic | 35.0% | |
| TCTTCTTCTGCTTCTTCTTT+GGG | + | chr8.3:95093-95112 | None:intergenic | 35.0% | |
| TCTTTCTTCTTACAGTTCCA+TGG | - | chr8.3:95568-95587 | MS.gene042040:intron | 35.0% | |
| TGTAGAAACCATGGTAAGAA+AGG | + | chr8.3:95609-95628 | None:intergenic | 35.0% | |
| TTAAGATTCTCTGACATGAG+GGG | + | chr8.3:94420-94439 | None:intergenic | 35.0% | |
| TTCCTTTGTGACATTGAACA+AGG | - | chr8.3:95978-95997 | MS.gene042040:CDS | 35.0% | |
| TTGATTCATTCTCTGCATTC+AGG | - | chr8.3:93839-93858 | MS.gene042040:intron | 35.0% | |
| TTTGGAAAGATGCTTGTGAT+CGG | - | chr8.3:96045-96064 | MS.gene042040:CDS | 35.0% | |
| TTTGTGACATTGAACAAGGT+TGG | - | chr8.3:95982-96001 | MS.gene042040:CDS | 35.0% | |
| ! | AATTTTGTGATTGTACGCAG+GGG | - | chr8.3:95273-95292 | MS.gene042040:intron | 35.0% |
| ! | CAATTTTGTGATTGTACGCA+GGG | - | chr8.3:95272-95291 | MS.gene042040:intron | 35.0% |
| ! | CTTCTATCTTGCAGGATTTT+GGG | - | chr8.3:95888-95907 | MS.gene042040:intron | 35.0% |
| ! | TCAATTTTGTGATTGTACGC+AGG | - | chr8.3:95271-95290 | MS.gene042040:intron | 35.0% |
| ! | TCTTTCCAAAAGCATACTTG+CGG | + | chr8.3:96035-96054 | None:intergenic | 35.0% |
| !! | AGATTTTGAACCTTTTGAGG+GGG | - | chr8.3:96227-96246 | MS.gene042040:intron | 35.0% |
| AAACCTATGAAGCACGGATA+CGG | + | chr8.3:94625-94644 | None:intergenic | 40.0% | |
| AACCCCTTTACCTTAAAAGG+TGG | + | chr8.3:96078-96097 | None:intergenic | 40.0% | |
| AAGAAGATCAAGGGGATTCT+TGG | + | chr8.3:95133-95152 | None:intergenic | 40.0% | |
| AAGCATTCAAAGCTCTCTTC+AGG | + | chr8.3:94756-94775 | None:intergenic | 40.0% | |
| AAGCTAGCTATGTTTCCACA+AGG | - | chr8.3:94117-94136 | MS.gene042040:intron | 40.0% | |
| AATTGGGGGACAATTGAAGT+TGG | + | chr8.3:93573-93592 | None:intergenic | 40.0% | |
| AGAAGATCAAGGGGATTCTT+GGG | + | chr8.3:95132-95151 | None:intergenic | 40.0% | |
| AGACACCCATCTCAAAATTG+GGG | + | chr8.3:93588-93607 | None:intergenic | 40.0% | |
| AGAGACACCCATCTCAAAAT+TGG | + | chr8.3:93590-93609 | None:intergenic | 40.0% | |
| AGCTAGCTATGTTTCCACAA+GGG | - | chr8.3:94118-94137 | MS.gene042040:intron | 40.0% | |
| ATAGCATTGCTCTCAAAGAC+AGG | + | chr8.3:93682-93701 | None:intergenic | 40.0% | |
| ATGACATGGAGCTGTATGAA+TGG | - | chr8.3:96148-96167 | MS.gene042040:CDS | 40.0% | |
| ATTTAAATTTGGCCCCCTTG+TGG | + | chr8.3:94135-94154 | None:intergenic | 40.0% | |
| ATTTAGGGATTTCTTGCCCA+CGG | + | chr8.3:96110-96129 | None:intergenic | 40.0% | |
| CAAAGAAGAAGCAGAAGAAG+AGG | - | chr8.3:95092-95111 | MS.gene042040:intron | 40.0% | |
| CACAACCCCTTTACCTTAAA+AGG | + | chr8.3:96081-96100 | None:intergenic | 40.0% | |
| CACATATACTTCACCCAAGT+TGG | - | chr8.3:94460-94479 | MS.gene042040:CDS | 40.0% | |
| CATCTCAGATGAAGCTCAAA+AGG | - | chr8.3:96182-96201 | MS.gene042040:intron | 40.0% | |
| CATTGTGAAATTTGCGGTTC+TGG | - | chr8.3:95802-95821 | MS.gene042040:CDS | 40.0% | |
| CCAAAATCCTGCAAGATAGA+AGG | + | chr8.3:95890-95909 | None:intergenic | 40.0% | |
| CCAAACTTCCGCAAGATATT+AGG | - | chr8.3:94943-94962 | MS.gene042040:intron | 40.0% | |
| CCTAATATCTTGCGGAAGTT+TGG | + | chr8.3:94946-94965 | None:intergenic | 40.0% | |
| CGGATCTGGACTCAAAATAT+TGG | - | chr8.3:95296-95315 | MS.gene042040:intron | 40.0% | |
| CTATCCAAGATTGGGATATG+GGG | - | chr8.3:93926-93945 | MS.gene042040:intron | 40.0% | |
| CTCAACAACAACACCTTGTA+TGG | - | chr8.3:93721-93740 | MS.gene042040:CDS | 40.0% | |
| CTCTATCCAAGATTGGGATA+TGG | - | chr8.3:93924-93943 | MS.gene042040:intron | 40.0% | |
| CTCTTCTTCTGCTTCTTCTT+TGG | + | chr8.3:95094-95113 | None:intergenic | 40.0% | |
| CTGGACTCAAAATATTGGTG+AGG | - | chr8.3:95301-95320 | MS.gene042040:intron | 40.0% | |
| CTTGGGTGAAGTATATGTGT+CGG | + | chr8.3:94459-94478 | None:intergenic | 40.0% | |
| GAGACACCCATCTCAAAATT+GGG | + | chr8.3:93589-93608 | None:intergenic | 40.0% | |
| GATGGATGAATGCTATGACA+TGG | - | chr8.3:96134-96153 | MS.gene042040:CDS | 40.0% | |
| GCTGAAGAGATTGCAATTAC+TGG | - | chr8.3:94730-94749 | MS.gene042040:CDS | 40.0% | |
| GGATTCATGTCGAGAAATTG+AGG | + | chr8.3:93622-93641 | None:intergenic | 40.0% | |
| GTACTCTGCTTGTGATTGAT+GGG | - | chr8.3:95654-95673 | MS.gene042040:intron | 40.0% | |
| TAAACCCCATATCCCAATCT+TGG | + | chr8.3:93933-93952 | None:intergenic | 40.0% | |
| TCATCCAGTATCATCTTGCT+TGG | + | chr8.3:95159-95178 | None:intergenic | 40.0% | |
| TGAAAAAAATCAGCTTGGGC+TGG | - | chr8.3:95731-95750 | MS.gene042040:CDS | 40.0% | |
| TTAGAATCTTTAGGCTGGGA+AGG | + | chr8.3:95018-95037 | None:intergenic | 40.0% | |
| TTCAGAGAGGTTGCTATCAA+AGG | - | chr8.3:95213-95232 | MS.gene042040:intron | 40.0% | |
| TTCAGGCTCACATTGAACAA+TGG | - | chr8.3:93856-93875 | MS.gene042040:intron | 40.0% | |
| TTCCCAGCCTAAAGATTCTA+AGG | - | chr8.3:95017-95036 | MS.gene042040:intron | 40.0% | |
| TTTCTCGACATGAATCCTCT+TGG | - | chr8.3:93625-93644 | MS.gene042040:CDS | 40.0% | |
| ! | AAGTGGCTCTATCCAAGATT+GGG | - | chr8.3:93918-93937 | MS.gene042040:intron | 40.0% |
| ! | AATAAGTTTGGGATACGGTG+TGG | + | chr8.3:94050-94069 | None:intergenic | 40.0% |
| ! | CCTTCTATCTTGCAGGATTT+TGG | - | chr8.3:95887-95906 | MS.gene042040:intron | 40.0% |
| ! | CGAAGCTATTTGTTGCCAAA+GGG | + | chr8.3:94397-94416 | None:intergenic | 40.0% |
| ! | CGTTTGTAGCGAGTGAATTT+TGG | - | chr8.3:95391-95410 | MS.gene042040:intron | 40.0% |
| ! | CTCATGTCGAGAGATACTTT+TGG | - | chr8.3:94905-94924 | MS.gene042040:CDS | 40.0% |
| ! | CTTTCCAAAAGCATACTTGC+GGG | + | chr8.3:96034-96053 | None:intergenic | 40.0% |
| ! | TGACTTGGCCTAATATCTTG+CGG | + | chr8.3:94954-94973 | None:intergenic | 40.0% |
| !! | ACCTTGGCCTTAGAATCTTT+AGG | + | chr8.3:95027-95046 | None:intergenic | 40.0% |
| !! | ATTGTCCCCCAATTTTGAGA+TGG | - | chr8.3:93579-93598 | MS.gene042040:CDS | 40.0% |
| !! | CAAAAGTATCTCTCGACATG+AGG | + | chr8.3:94907-94926 | None:intergenic | 40.0% |
| !! | GTGTTTGTTGTTATGGGCTT+GGG | + | chr8.3:95479-95498 | None:intergenic | 40.0% |
| !! | TGTGTTTGTTGTTATGGGCT+TGG | + | chr8.3:95480-95499 | None:intergenic | 40.0% |
| !!! | AGCCACCTTTTAAGGTAAAG+GGG | - | chr8.3:96073-96092 | MS.gene042040:CDS | 40.0% |
| !!! | CTTTTAAGGTAAAGGGGTTG+TGG | - | chr8.3:96079-96098 | MS.gene042040:CDS | 40.0% |
| !!! | GAGCCACCTTTTAAGGTAAA+GGG | - | chr8.3:96072-96091 | MS.gene042040:CDS | 40.0% |
| !!! | TGAGCCACCTTTTAAGGTAA+AGG | - | chr8.3:96071-96090 | MS.gene042040:CDS | 40.0% |
| !!! | TTGTCCCCCAATTTTGAGAT+GGG | - | chr8.3:93580-93599 | MS.gene042040:CDS | 40.0% |
| AAACGACGAACCCAAAAAGG+AGG | - | chr8.3:95047-95066 | MS.gene042040:intron | 45.0% | |
| AGAGAAGACTTACTGGAGGA+AGG | + | chr8.3:93956-93975 | None:intergenic | 45.0% | |
| ATCAAGGGGATTCTTGGGTT+TGG | + | chr8.3:95127-95146 | None:intergenic | 45.0% | |
| ATGTCGTTATGATGTCAGCC+AGG | + | chr8.3:94828-94847 | None:intergenic | 45.0% | |
| CAGATGTGTATGTCAGACAG+CGG | - | chr8.3:94092-94111 | MS.gene042040:intron | 45.0% | |
| CTAGCTATGTTTCCACAAGG+GGG | - | chr8.3:94120-94139 | MS.gene042040:intron | 45.0% | |
| CTTGGAGGAAGAAGATCAAG+GGG | + | chr8.3:95141-95160 | None:intergenic | 45.0% | |
| GAAGTTTGGCTGATTGACCA+AGG | + | chr8.3:94932-94951 | None:intergenic | 45.0% | |
| GACACCCATCTCAAAATTGG+GGG | + | chr8.3:93587-93606 | None:intergenic | 45.0% | |
| GATATTAGGCCAAGTCAAGC+AGG | - | chr8.3:94957-94976 | MS.gene042040:intron | 45.0% | |
| GCAAGATGATACTGGATGAC+TGG | - | chr8.3:95160-95179 | MS.gene042040:intron | 45.0% | |
| GCCTCCAATACTTACCTAGT+TGG | - | chr8.3:94790-94809 | MS.gene042040:CDS | 45.0% | |
| GCTAGCTATGTTTCCACAAG+GGG | - | chr8.3:94119-94138 | MS.gene042040:intron | 45.0% | |
| GCTTGGAGGAAGAAGATCAA+GGG | + | chr8.3:95142-95161 | None:intergenic | 45.0% | |
| GGAGCTGTATGAATGGACAA+AGG | - | chr8.3:96155-96174 | MS.gene042040:CDS | 45.0% | |
| GGCCTTAGAATCTTTAGGCT+GGG | + | chr8.3:95022-95041 | None:intergenic | 45.0% | |
| GGCTTCTTTGCAGATTGAAG+AGG | + | chr8.3:94997-95016 | None:intergenic | 45.0% | |
| GGGACATGTATGATCCTGAA+GGG | - | chr8.3:95908-95927 | MS.gene042040:intron | 45.0% | |
| GGTAAACGACGAACCCAAAA+AGG | - | chr8.3:95044-95063 | MS.gene042040:intron | 45.0% | |
| GGTACTCTGCTTGTGATTGA+TGG | - | chr8.3:95653-95672 | MS.gene042040:intron | 45.0% | |
| GTGACATTGAACAAGGTTGG+TGG | - | chr8.3:95985-96004 | MS.gene042040:CDS | 45.0% | |
| GTGGCCAACTAGGTAAGTAT+TGG | + | chr8.3:94797-94816 | None:intergenic | 45.0% | |
| GTTGAGGAGAGAAGACTTAC+TGG | + | chr8.3:93963-93982 | None:intergenic | 45.0% | |
| TCAAGGGGATTCTTGGGTTT+GGG | + | chr8.3:95126-95145 | None:intergenic | 45.0% | |
| TCACAATGTACAATCAGGGG+CGG | + | chr8.3:95790-95809 | None:intergenic | 45.0% | |
| TCCAGTATCATCTTGCTTGG+AGG | + | chr8.3:95156-95175 | None:intergenic | 45.0% | |
| TCCTCCAAGCAAGATGATAC+TGG | - | chr8.3:95152-95171 | MS.gene042040:intron | 45.0% | |
| TCTCAAAGACAGGACCATCA+GGG | + | chr8.3:93672-93691 | None:intergenic | 45.0% | |
| TGCTTGGAGGAAGAAGATCA+AGG | + | chr8.3:95143-95162 | None:intergenic | 45.0% | |
| TGGGACATGTATGATCCTGA+AGG | - | chr8.3:95907-95926 | MS.gene042040:intron | 45.0% | |
| TGTCAATGTGTCAGTGTCTG+TGG | - | chr8.3:94591-94610 | MS.gene042040:CDS | 45.0% | |
| TGTCGTTATGATGTCAGCCA+GGG | + | chr8.3:94827-94846 | None:intergenic | 45.0% | |
| TTGTTGCCAAAGGGTAGCTT+TGG | + | chr8.3:94388-94407 | None:intergenic | 45.0% | |
| ! | ACCTTCTTGGCCTCCTTTTT+GGG | + | chr8.3:95060-95079 | None:intergenic | 45.0% |
| ! | CAAGTGGCTCTATCCAAGAT+TGG | - | chr8.3:93917-93936 | MS.gene042040:intron | 45.0% |
| ! | CGAGAGATACTTTTGGACCT+TGG | - | chr8.3:94912-94931 | MS.gene042040:CDS | 45.0% |
| ! | GCGAAGCTATTTGTTGCCAA+AGG | + | chr8.3:94398-94417 | None:intergenic | 45.0% |
| ! | GCTTCTTCTTTGGGCTTTTC+TGG | + | chr8.3:95084-95103 | None:intergenic | 45.0% |
| ! | TGGCCTTAGAATCTTTAGGC+TGG | + | chr8.3:95023-95042 | None:intergenic | 45.0% |
| ! | TTAGCCCGCAAGTATGCTTT+TGG | - | chr8.3:96027-96046 | MS.gene042040:CDS | 45.0% |
| ! | TTTGGGTTCGTCGTTTACCT+TGG | + | chr8.3:95043-95062 | None:intergenic | 45.0% |
| !! | AGGTTGGTGGATTTCTTCAG+CGG | - | chr8.3:95998-96017 | MS.gene042040:CDS | 45.0% |
| !! | CTAGGTAAGTATTGGAGGCA+AGG | + | chr8.3:94789-94808 | None:intergenic | 45.0% |
| !! | GCCAACTAGGTAAGTATTGG+AGG | + | chr8.3:94794-94813 | None:intergenic | 45.0% |
| !! | GCCTAAAGATTCTAAGGCCA+AGG | - | chr8.3:95023-95042 | MS.gene042040:intron | 45.0% |
| !!! | GGTGAGGCACAATTTTTTCG+CGG | - | chr8.3:95317-95336 | MS.gene042040:intron | 45.0% |
| !! | TTATTTCATTTATTTAAATT+TGG | + | chr8.3:94146-94165 | None:intergenic | 5.0% |
| !!! | AAACTTATTTTAAAATTAAT+TGG | - | chr8.3:94061-94080 | MS.gene042040:intron | 5.0% |
| !!! | AATTAATTTTAAAATAAGTT+TGG | + | chr8.3:94062-94081 | None:intergenic | 5.0% |
| !!! | ATTAATTTTAAAATAAGTTT+GGG | + | chr8.3:94061-94080 | None:intergenic | 5.0% |
| AACAGAGGTTCCCCCTCAAA+AGG | + | chr8.3:96240-96259 | None:intergenic | 50.0% | |
| AAGACAGGAACCTTGCCAAG+AGG | + | chr8.3:93643-93662 | None:intergenic | 50.0% | |
| AAGCACTTGGCATCCAACAG+AGG | + | chr8.3:96255-96274 | None:intergenic | 50.0% | |
| ACCCAAAAAGGAGGCCAAGA+AGG | - | chr8.3:95056-95075 | MS.gene042040:intron | 50.0% | |
| ACGGACACTGACACATTCCT+CGG | - | chr8.3:94499-94518 | MS.gene042040:CDS | 50.0% | |
| CGACATGAATCCTCTTGGCA+AGG | - | chr8.3:93630-93649 | MS.gene042040:CDS | 50.0% | |
| CTCAAAGACAGGACCATCAG+GGG | + | chr8.3:93671-93690 | None:intergenic | 50.0% | |
| CTCGACATGAGGAAACTCTG+AGG | + | chr8.3:94896-94915 | None:intergenic | 50.0% | |
| CTCTCAAAGACAGGACCATC+AGG | + | chr8.3:93673-93692 | None:intergenic | 50.0% | |
| GAGGAGAGAAGACTTACTGG+AGG | + | chr8.3:93960-93979 | None:intergenic | 50.0% | |
| GATACGGTGTGGCATGGATT+GGG | + | chr8.3:94039-94058 | None:intergenic | 50.0% | |
| GGATTCTTGGGTTTGGGCTT+GGG | + | chr8.3:95120-95139 | None:intergenic | 50.0% | |
| TCTTGGCAAGGTTCCTGTCT+TGG | - | chr8.3:93642-93661 | MS.gene042040:CDS | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | - | chr8.3:94619-94638 | MS.gene042040:CDS | 50.0% | |
| TTTGTGATTGTACGCAGGGG+CGG | - | chr8.3:95276-95295 | MS.gene042040:intron | 50.0% | |
| ! | CACCTTCTTGGCCTCCTTTT+TGG | + | chr8.3:95061-95080 | None:intergenic | 50.0% |
| !! | AAAATCAGCTTGGGCTGGTG+TGG | - | chr8.3:95736-95755 | MS.gene042040:CDS | 50.0% |
| !! | AACCAGAGAGAGTACCCTTC+AGG | + | chr8.3:95925-95944 | None:intergenic | 50.0% |
| !! | ATCCTGAAGGGTACTCTCTC+TGG | - | chr8.3:95920-95939 | MS.gene042040:intron | 50.0% |
| !! | GTGTCAGATTTGGTGTGTCC+CGG | + | chr8.3:94526-94545 | None:intergenic | 50.0% |
| !! | TGGTGGATTTCTTCAGCGGA+TGG | - | chr8.3:96002-96021 | MS.gene042040:CDS | 50.0% |
| !! | TTTTGAGGGGGAACCTCTGT+TGG | - | chr8.3:96239-96258 | MS.gene042040:intron | 50.0% |
| !!! | CGGTTCTGAGCCACCTTTTA+AGG | - | chr8.3:96065-96084 | MS.gene042040:CDS | 50.0% |
| ACTGACACATTCCTCGGACC+GGG | - | chr8.3:94505-94524 | MS.gene042040:CDS | 55.0% | |
| CACTGACACATTCCTCGGAC+CGG | - | chr8.3:94504-94523 | MS.gene042040:CDS | 55.0% | |
| CAGCTTCAGCCTGCTTGACT+TGG | + | chr8.3:94969-94988 | None:intergenic | 55.0% | |
| CCATCAGGGGTTTCCAAGAC+AGG | + | chr8.3:93658-93677 | None:intergenic | 55.0% | |
| CCTGTCTTGGAAACCCCTGA+TGG | - | chr8.3:93655-93674 | MS.gene042040:CDS | 55.0% | |
| GGATACGGTGTGGCATGGAT+TGG | + | chr8.3:94040-94059 | None:intergenic | 55.0% | |
| GGGATTCTTGGGTTTGGGCT+TGG | + | chr8.3:95121-95140 | None:intergenic | 55.0% | |
| GGGTAGCCAAAGCTACCCTT+TGG | - | chr8.3:94379-94398 | MS.gene042040:intron | 55.0% | |
| ! | AAGGGGTTGTGGCTTTTCCG+TGG | - | chr8.3:96090-96109 | MS.gene042040:CDS | 55.0% |
| ! | AGGGGTTGTGGCTTTTCCGT+GGG | - | chr8.3:96091-96110 | MS.gene042040:CDS | 55.0% |
| ! | GTTTGGGATACGGTGTGGCA+TGG | + | chr8.3:94045-94064 | None:intergenic | 55.0% |
| !! | GGGCTTTTCTGGCACCTTCT+TGG | + | chr8.3:95073-95092 | None:intergenic | 55.0% |
| AATCAGGGGCGGACCTGAAC+AGG | + | chr8.3:95779-95798 | None:intergenic | 60.0% | |
| AGTTGGCCACTCTGTCACCC+TGG | - | chr8.3:94807-94826 | MS.gene042040:CDS | 60.0% | |
| ATTGTACGCAGGGGCGGATC+TGG | - | chr8.3:95282-95301 | MS.gene042040:intron | 60.0% | |
| GACCTGAACAGGTCCTGGTG+TGG | + | chr8.3:95768-95787 | None:intergenic | 60.0% | |
| GGGTGACAGAGTGGCCAACT+AGG | + | chr8.3:94807-94826 | None:intergenic | 60.0% | |
| TGCCACACCAGGACCTGTTC+AGG | - | chr8.3:95763-95782 | MS.gene042040:CDS | 60.0% | |
| TGTCAGCCAGGGTGACAGAG+TGG | + | chr8.3:94816-94835 | None:intergenic | 60.0% | |
| !! | ACGGTGTGGCATGGATTGGG+TGG | + | chr8.3:94036-94055 | None:intergenic | 60.0% |
| !! | ATTTGGTGTGTCCCGGTCCG+AGG | + | chr8.3:94519-94538 | None:intergenic | 60.0% |
| GGTGTGGCACTTGCCACACC+AGG | - | chr8.3:95752-95771 | MS.gene042040:CDS | 65.0% | |
| GGGCGGACCTGAACAGGTCC+TGG | + | chr8.3:95773-95792 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 93407 | 96281 | 93407 | ID=MS.gene042040 |
| chr8.3 | mRNA | 93407 | 96281 | 93407 | ID=MS.gene042040.t1;Parent=MS.gene042040 |
| chr8.3 | exon | 96273 | 96281 | 96273 | ID=MS.gene042040.t1.exon1;Parent=MS.gene042040.t1 |
| chr8.3 | CDS | 96273 | 96281 | 96273 | ID=cds.MS.gene042040.t1;Parent=MS.gene042040.t1 |
| chr8.3 | exon | 95926 | 96186 | 95926 | ID=MS.gene042040.t1.exon2;Parent=MS.gene042040.t1 |
| chr8.3 | CDS | 95926 | 96186 | 95926 | ID=cds.MS.gene042040.t1;Parent=MS.gene042040.t1 |
| chr8.3 | exon | 95726 | 95827 | 95726 | ID=MS.gene042040.t1.exon3;Parent=MS.gene042040.t1 |
| chr8.3 | CDS | 95726 | 95827 | 95726 | ID=cds.MS.gene042040.t1;Parent=MS.gene042040.t1 |
| chr8.3 | exon | 94454 | 94958 | 94454 | ID=MS.gene042040.t1.exon4;Parent=MS.gene042040.t1 |
| chr8.3 | CDS | 94454 | 94958 | 94454 | ID=cds.MS.gene042040.t1;Parent=MS.gene042040.t1 |
| chr8.3 | exon | 93407 | 93786 | 93407 | ID=MS.gene042040.t1.exon5;Parent=MS.gene042040.t1 |
| chr8.3 | CDS | 93407 | 93786 | 93407 | ID=cds.MS.gene042040.t1;Parent=MS.gene042040.t1 |
| Gene Sequence |
| Protein sequence |
