Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94948.t1 | XP_013460045.1 | 96.4 | 419 | 15 | 0 | 1 | 419 | 1 | 419 | 4.50E-216 | 760.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94948.t1 | Q9FUM1 | 80.8 | 422 | 78 | 2 | 1 | 419 | 1 | 422 | 4.7e-182 | 638.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94948.t1 | A0A072UXB1 | 96.4 | 419 | 15 | 0 | 1 | 419 | 1 | 419 | 3.2e-216 | 760.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94948 | MS.gene04200 | PPI |
| MS.gene94948 | MS.gene023009 | PPI |
| MS.gene94948 | MS.gene43488 | PPI |
| MS.gene94948 | MS.gene027317 | PPI |
| MS.gene94948 | MS.gene047236 | PPI |
| MS.gene94948 | MS.gene95042 | PPI |
| MS.gene94948 | MS.gene042040 | PPI |
| MS.gene94948 | MS.gene04296 | PPI |
| MS.gene94948 | MS.gene84450 | PPI |
| MS.gene94948 | MS.gene00585 | PPI |
| MS.gene94948 | MS.gene051739 | PPI |
| MS.gene94948 | MS.gene072093 | PPI |
| MS.gene94948 | MS.gene012799 | PPI |
| MS.gene94948 | MS.gene002011 | PPI |
| MS.gene047236 | MS.gene94948 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94948.t1 | MTR_3g058940 | 98.091 | 419 | 8 | 0 | 1 | 419 | 1 | 419 | 0.0 | 857 |
| MS.gene94948.t1 | MTR_2g005570 | 88.544 | 419 | 44 | 3 | 2 | 419 | 3 | 418 | 0.0 | 746 |
| MS.gene94948.t1 | MTR_2g005570 | 88.305 | 419 | 45 | 3 | 2 | 419 | 3 | 418 | 0.0 | 745 |
| MS.gene94948.t1 | MTR_4g134770 | 79.524 | 420 | 84 | 2 | 1 | 419 | 1 | 419 | 0.0 | 671 |
| MS.gene94948.t1 | MTR_4g134770 | 81.558 | 385 | 69 | 2 | 36 | 419 | 1 | 384 | 0.0 | 625 |
| MS.gene94948.t1 | MTR_1g088850 | 26.887 | 212 | 144 | 4 | 1 | 203 | 1 | 210 | 2.12e-13 | 69.7 |
| MS.gene94948.t1 | MTR_3g064700 | 27.059 | 170 | 115 | 4 | 40 | 201 | 40 | 208 | 1.36e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94948.t1 | AT1G09640 | 76.429 | 420 | 92 | 4 | 1 | 419 | 1 | 414 | 0.0 | 648 |
| MS.gene94948.t1 | AT1G57720 | 75.714 | 420 | 94 | 5 | 1 | 419 | 1 | 413 | 0.0 | 633 |
| MS.gene94948.t1 | AT1G57720 | 75.714 | 420 | 94 | 5 | 1 | 419 | 1 | 413 | 0.0 | 633 |
| MS.gene94948.t1 | AT1G09640 | 69.118 | 204 | 62 | 1 | 1 | 203 | 1 | 204 | 6.20e-100 | 299 |
| MS.gene94948.t1 | AT1G09640 | 86.301 | 73 | 9 | 1 | 348 | 419 | 193 | 265 | 2.38e-35 | 131 |
| MS.gene94948.t1 | AT3G62760 | 26.667 | 210 | 143 | 4 | 1 | 201 | 1 | 208 | 2.60e-14 | 72.4 |
| MS.gene94948.t1 | AT2G30870 | 29.101 | 189 | 107 | 7 | 1 | 175 | 1 | 176 | 7.10e-13 | 68.2 |
| MS.gene94948.t1 | AT2G30860 | 31.410 | 156 | 97 | 3 | 12 | 160 | 14 | 166 | 3.47e-12 | 65.9 |
Find 124 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTTTGACTTGCAGGATTC+TGG | 0.045791 | 3.1:-44537431 | MS.gene94948:intron |
| CCAAATATCTTTCGGAAATT+TGG | 0.089748 | 3.1:+44538135 | None:intergenic |
| CCAAATTTCCGAAAGATATT+TGG | 0.156028 | 3.1:-44538135 | MS.gene94948:CDS |
| GCAACTTGCAACTTGTATTT+AGG | 0.190439 | 3.1:-44538237 | MS.gene94948:CDS |
| TGGATCAGAGCCTCCATTTA+AGG | 0.199866 | 3.1:-44537253 | MS.gene94948:CDS |
| TTTGGAAAGATGCTTATAAT+TGG | 0.211636 | 3.1:-44537273 | MS.gene94948:CDS |
| GGGATTCTTGGGTTTGGGCT+TGG | 0.219024 | 3.1:+44537957 | None:intergenic |
| CTCTTCAGCTTCTACAACTT+TGG | 0.232663 | 3.1:+44537987 | None:intergenic |
| TCTGATTTAGCCACTTTCTT+TGG | 0.234756 | 3.1:+44538021 | None:intergenic |
| GGATTCTTGGGTTTGGGCTT+GGG | 0.253487 | 3.1:+44537958 | None:intergenic |
| ATCTAGGGGATTCTTGGGTT+TGG | 0.270067 | 3.1:+44537951 | None:intergenic |
| CACAACCCCTTCACCTTAAA+TGG | 0.280661 | 3.1:+44537240 | None:intergenic |
| CTGGCTCGCAAGTATGCTTT+TGG | 0.282861 | 3.1:-44537291 | MS.gene94948:CDS |
| TCCTCCAAGTAAGATGGTTT+TGG | 0.286274 | 3.1:-44537923 | MS.gene94948:CDS |
| TCTAGGGGATTCTTGGGTTT+GGG | 0.299303 | 3.1:+44537952 | None:intergenic |
| TTTATCAACATGAATCCTAT+TGG | 0.311982 | 3.1:-44540039 | MS.gene94948:CDS |
| ATTTGAGGGAGAGGCTCTTT+TGG | 0.313654 | 3.1:-44537079 | MS.gene94948:CDS |
| TTGGGTGAAAACAATTTGTT+TGG | 0.314427 | 3.1:-44539305 | MS.gene94948:CDS |
| AAGAAGATCTAGGGGATTCT+TGG | 0.315713 | 3.1:+44537945 | None:intergenic |
| TCTTCAGCTTCTACAACTTT+GGG | 0.316405 | 3.1:+44537988 | None:intergenic |
| CGTTTGACTTGCAGGATTCT+GGG | 0.329918 | 3.1:-44537430 | MS.gene94948:intron |
| TTCGTTACAGGTTCCGGTCT+TGG | 0.337595 | 3.1:-44539905 | MS.gene94948:intron |
| CAGCGGTATTAAAGTTGAAT+TGG | 0.337896 | 3.1:-44540103 | MS.gene94948:CDS |
| AATAATAATACCTTTCCAAT+AGG | 0.351343 | 3.1:+44540024 | None:intergenic |
| GAAACACCCATCTGAAAATC+TGG | 0.353577 | 3.1:+44540078 | None:intergenic |
| TTTGGTGCATCTTTAGTTGT+GGG | 0.356845 | 3.1:+44538039 | None:intergenic |
| TGGGCTTAGATTCCTTAGGC+TGG | 0.378242 | 3.1:+44538058 | None:intergenic |
| CTCATGTTGAGAGATACTTC+TGG | 0.381009 | 3.1:-44538173 | MS.gene94948:CDS |
| CATTCATCCATGATAAACTT+TGG | 0.388731 | 3.1:+44537195 | None:intergenic |
| TAACCTGGCCAAATATCTTT+CGG | 0.388863 | 3.1:+44538127 | None:intergenic |
| TTAGATTCCTTAGGCTGGGT+AGG | 0.398094 | 3.1:+44538063 | None:intergenic |
| CATTTAAGGTGAAGGGGTTG+TGG | 0.403530 | 3.1:-44537239 | MS.gene94948:CDS |
| CTCTCAAAGACGGGACCATC+AGG | 0.407936 | 3.1:+44539877 | None:intergenic |
| TTCTTCCACAGTCATGGCTC+TGG | 0.408438 | 3.1:-44540276 | None:intergenic |
| ATCATTGAAGAGAGCATTTG+AGG | 0.416435 | 3.1:-44538328 | MS.gene94948:CDS |
| AGAAGATCTAGGGGATTCTT+GGG | 0.428483 | 3.1:+44537946 | None:intergenic |
| TGGTGGGTTTCTTCAAAGAA+TGG | 0.433281 | 3.1:-44537316 | MS.gene94948:CDS |
| GTTTCTTCAAAGAATGGATC+TGG | 0.437648 | 3.1:-44537310 | MS.gene94948:CDS |
| CTTTGGTGCATCTTTAGTTG+TGG | 0.442321 | 3.1:+44538038 | None:intergenic |
| TGGATCATCTCCCATTGATC+AGG | 0.442424 | 3.1:-44539285 | MS.gene94948:intron |
| AGAGATTCCAAAGTTTATCA+TGG | 0.445357 | 3.1:-44537202 | MS.gene94948:CDS |
| CCCAACCAGGTAGGTATTGT+GGG | 0.452726 | 3.1:+44538287 | None:intergenic |
| ATCCAGAGGGATATTCTCTC+TGG | 0.453121 | 3.1:-44537398 | MS.gene94948:CDS |
| GGATTCATGTTGATAAATTG+AGG | 0.453213 | 3.1:+44540045 | None:intergenic |
| CAACTTACTGGAGCAAAGTA+GGG | 0.455478 | 3.1:+44538629 | None:intergenic |
| GGGTTCTTAGCAGATGGAAT+AGG | 0.455973 | 3.1:+44538084 | None:intergenic |
| TACTTGGAGGAAGAAGATCT+AGG | 0.462835 | 3.1:+44537935 | None:intergenic |
| AAAAGAGCCTCTCCCTCAAA+TGG | 0.463286 | 3.1:+44537081 | None:intergenic |
| GCAACTTACTGGAGCAAAGT+AGG | 0.464711 | 3.1:+44538628 | None:intergenic |
| TGTTTCCCTTCTGAGCGTGC+AGG | 0.465505 | 3.1:+44540160 | None:intergenic |
| GTTTGCTGCAGTTGCACGAT+TGG | 0.465930 | 3.1:-44539324 | MS.gene94948:intron |
| TCTTCTTCCTCCAAGTAAGA+TGG | 0.468637 | 3.1:-44537929 | MS.gene94948:CDS |
| TAGATTCCTTAGGCTGGGTA+GGG | 0.469816 | 3.1:+44538064 | None:intergenic |
| TTTCCGAAAGATATTTGGCC+AGG | 0.474661 | 3.1:-44538130 | MS.gene94948:CDS |
| GTTGTGGGCTTAGATTCCTT+AGG | 0.477108 | 3.1:+44538054 | None:intergenic |
| ATATCTTTCGGAAATTTGGC+TGG | 0.481332 | 3.1:+44538139 | None:intergenic |
| GTAGATCCTGCACGCTCAGA+AGG | 0.482060 | 3.1:-44540166 | MS.gene94948:intron |
| CCCACAATACCTACCTGGTT+GGG | 0.483114 | 3.1:-44538287 | MS.gene94948:CDS |
| TCATCCAAAACCATCTTACT+TGG | 0.483774 | 3.1:+44537919 | None:intergenic |
| TTTGCTGCAGTTGCACGATT+GGG | 0.486318 | 3.1:-44539323 | MS.gene94948:intron |
| CAAAGTTGTAGAAGCTGAAG+AGG | 0.492104 | 3.1:-44537986 | MS.gene94948:CDS |
| ACTTGGAGGAAGAAGATCTA+GGG | 0.497071 | 3.1:+44537936 | None:intergenic |
| GATAGCAACCTCGCGGAAGT+TGG | 0.498353 | 3.1:+44537867 | None:intergenic |
| GCCCAACCAGGTAGGTATTG+TGG | 0.500118 | 3.1:+44538286 | None:intergenic |
| TAGCTTCAGTCTGCTTAACC+TGG | 0.507478 | 3.1:+44538112 | None:intergenic |
| GAGCCTCCATTTAAGGTGAA+GGG | 0.508653 | 3.1:-44537246 | MS.gene94948:CDS |
| GATTCATGTTGATAAATTGA+GGG | 0.510474 | 3.1:+44540046 | None:intergenic |
| ATCGCATTGCTCTCAAAGAC+GGG | 0.515235 | 3.1:+44539868 | None:intergenic |
| TCCAAAACCATCTTACTTGG+AGG | 0.515500 | 3.1:+44537922 | None:intergenic |
| TAAAGATGCACCAAAGAAAG+TGG | 0.525965 | 3.1:-44538031 | MS.gene94948:CDS |
| GGGCTTAGATTCCTTAGGCT+GGG | 0.526432 | 3.1:+44538059 | None:intergenic |
| GCCCACAATACCTACCTGGT+TGG | 0.526664 | 3.1:-44538288 | MS.gene94948:CDS |
| AACCTCGCGGAAGTTGGACT+TGG | 0.526671 | 3.1:+44537873 | None:intergenic |
| CCATCAGGTGTTTCCAAGAC+CGG | 0.535496 | 3.1:+44539892 | None:intergenic |
| TTCCGCGAGGTTGCTATCAA+AGG | 0.537041 | 3.1:-44537862 | MS.gene94948:intron |
| CCAGGTAGGTATTGTGGGCA+AGG | 0.538773 | 3.1:+44538292 | None:intergenic |
| CCTTGCCCACAATACCTACC+TGG | 0.540810 | 3.1:-44538292 | MS.gene94948:CDS |
| CATCGCATTGCTCTCAAAGA+CGG | 0.541110 | 3.1:+44539867 | None:intergenic |
| AAAATCTTCAATCATCTGAC+TGG | 0.550866 | 3.1:+44537107 | None:intergenic |
| TGACACTGAACAAGGTTGGT+GGG | 0.551452 | 3.1:-44537332 | MS.gene94948:CDS |
| TTCAGGCCCATGTTGAACAA+TGG | 0.551725 | 3.1:-44538721 | MS.gene94948:intron |
| TTCGTGACACTGAACAAGGT+TGG | 0.558246 | 3.1:-44537336 | MS.gene94948:CDS |
| AGAGCCTCCATTTAAGGTGA+AGG | 0.562476 | 3.1:-44537247 | MS.gene94948:CDS |
| TTCTTTCGTGACACTGAACA+AGG | 0.563971 | 3.1:-44537340 | MS.gene94948:CDS |
| AATCAATCCATTGTTCAACA+TGG | 0.568325 | 3.1:+44538714 | None:intergenic |
| AACCAGAGAGAATATCCCTC+TGG | 0.572768 | 3.1:+44537396 | None:intergenic |
| ACAACATTATGAAGTTGTAT+CGG | 0.574030 | 3.1:-44538670 | MS.gene94948:CDS |
| TAAGAACCCTACCCAGCCTA+AGG | 0.574970 | 3.1:-44538070 | MS.gene94948:CDS |
| CAACATGAATCCTATTGGAA+AGG | 0.578803 | 3.1:-44540034 | MS.gene94948:intron |
| GTGACACTGAACAAGGTTGG+TGG | 0.579111 | 3.1:-44537333 | MS.gene94948:CDS |
| ATCAATCCATTGTTCAACAT+GGG | 0.580524 | 3.1:+44538715 | None:intergenic |
| TGGGTAGGGTTCTTAGCAGA+TGG | 0.583717 | 3.1:+44538078 | None:intergenic |
| TGTCTAAATGAAGGTAGAGG+AGG | 0.587013 | 3.1:-44538361 | MS.gene94948:intron |
| AGCAATGCGATGGCTCGCTA+TGG | 0.587860 | 3.1:-44539856 | MS.gene94948:intron |
| ATTCATGTTGATAAATTGAG+GGG | 0.590470 | 3.1:+44540047 | None:intergenic |
| TGAGAGATACTTCTGGACCT+TGG | 0.592334 | 3.1:-44538166 | MS.gene94948:CDS |
| AGCCTCCATTTAAGGTGAAG+GGG | 0.592740 | 3.1:-44537245 | MS.gene94948:CDS |
| ACGCTCTTTCTGAGCTTCGT+CGG | 0.595731 | 3.1:+44537131 | None:intergenic |
| TTCTTAGCAGATGGAATAGG+TGG | 0.598600 | 3.1:+44538087 | None:intergenic |
| CTGGGACATGTATGATCCAG+AGG | 0.600612 | 3.1:-44537412 | MS.gene94948:CDS |
| GAAATTTGGCTGGTTGACCA+AGG | 0.603028 | 3.1:+44538149 | None:intergenic |
| TTCGTCGGAGATGTCAACCT+TGG | 0.603692 | 3.1:+44537146 | None:intergenic |
| TAGATCCTGCACGCTCAGAA+GGG | 0.604424 | 3.1:-44540165 | MS.gene94948:CDS |
| AAGTTGTATCGGCCAAGACG+TGG | 0.604703 | 3.1:-44538659 | MS.gene94948:CDS |
| CTTGGAGGAAGAAGATCTAG+GGG | 0.608769 | 3.1:+44537937 | None:intergenic |
| GGGTAACAGAATGCCCAACC+AGG | 0.610540 | 3.1:+44538274 | None:intergenic |
| ACTTTGGAATCTCTTGTCCA+CGG | 0.614824 | 3.1:+44537211 | None:intergenic |
| CGTCTTTGAGAGCAATGCGA+TGG | 0.616668 | 3.1:-44539866 | MS.gene94948:CDS |
| CCGGTCTTGGAAACACCTGA+TGG | 0.617857 | 3.1:-44539892 | MS.gene94948:CDS |
| AACTTACTGGAGCAAAGTAG+GGG | 0.623521 | 3.1:+44538630 | None:intergenic |
| CAGAAGTATCTCTCAACATG+AGG | 0.629855 | 3.1:+44538174 | None:intergenic |
| CATGGATGAATGCTATGACA+TGG | 0.631015 | 3.1:-44537184 | MS.gene94948:CDS |
| AAGTTGCTATAATGTCAGCA+AGG | 0.633792 | 3.1:+44538253 | None:intergenic |
| AGTTGCTATAATGTCAGCAA+GGG | 0.642488 | 3.1:+44538254 | None:intergenic |
| AACCCCTTCACCTTAAATGG+AGG | 0.653598 | 3.1:+44537243 | None:intergenic |
| TGGGACATGTATGATCCAGA+GGG | 0.668464 | 3.1:-44537411 | MS.gene94948:CDS |
| ACTTACTGGAGCAAAGTAGG+GGG | 0.673115 | 3.1:+44538631 | None:intergenic |
| ATGACATGGAGCTGTATGAG+TGG | 0.681725 | 3.1:-44537170 | MS.gene94948:CDS |
| CTGATTGCTGCTGAATACAG+CGG | 0.696980 | 3.1:-44540120 | MS.gene94948:CDS |
| TACCTTTGATAGCAACCTCG+CGG | 0.711183 | 3.1:+44537860 | None:intergenic |
| AACAGAATGCCCAACCAGGT+AGG | 0.711223 | 3.1:+44538278 | None:intergenic |
| CTCAACATGAGGAAACTCTG+AGG | 0.714280 | 3.1:+44538185 | None:intergenic |
| CACCAAGTCCAACTTCCGCG+AGG | 0.750596 | 3.1:-44537875 | MS.gene94948:CDS |
| GGAGCTGTATGAGTGGACCA+AGG | 0.785376 | 3.1:-44537163 | MS.gene94948:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAGTAATTGAAAATA+AGG | + | chr3.1:44537088-44537107 | None:intergenic | 15.0% |
| !! | ATCAAAGTAATTGAAAATAA+GGG | + | chr3.1:44537087-44537106 | None:intergenic | 15.0% |
| !! | GTAAAAAAATGGTATAAAAT+AGG | - | chr3.1:44537719-44537738 | MS.gene94948:intron | 15.0% |
| !! | TTAGACAAAAATTTCAAAAA+CGG | + | chr3.1:44538948-44538967 | None:intergenic | 15.0% |
| !!! | AATCTAATTGCAAATTTTTT+TGG | - | chr3.1:44537129-44537148 | MS.gene94948:CDS | 15.0% |
| !!! | TATTATGTTTTATGATTTGT+TGG | - | chr3.1:44538809-44538828 | MS.gene94948:intron | 15.0% |
| !!! | TTATACCATTTTTTTACTAT+AGG | + | chr3.1:44537716-44537735 | None:intergenic | 15.0% |
| !! | AAAGTATAACAGAAACTATT+AGG | - | chr3.1:44537847-44537866 | MS.gene94948:intron | 20.0% |
| !! | AATAATAATACCTTTCCAAT+AGG | + | chr3.1:44537301-44537320 | None:intergenic | 20.0% |
| !! | AATACATATTACAAGTAGAA+TGG | + | chr3.1:44538517-44538536 | None:intergenic | 20.0% |
| !! | AATATGTGAATTATCTTTCT+TGG | - | chr3.1:44538540-44538559 | MS.gene94948:intron | 20.0% |
| !! | CTATAATAGTATATTTCGAA+AGG | + | chr3.1:44539559-44539578 | None:intergenic | 20.0% |
| !! | GACTACAAAAACTTAAAAAT+AGG | + | chr3.1:44539510-44539529 | None:intergenic | 20.0% |
| !! | TAACACCTATAGTAAAAAAA+TGG | - | chr3.1:44537708-44537727 | MS.gene94948:intron | 20.0% |
| !! | TCAAAGTAATTGAAAATAAG+GGG | + | chr3.1:44537086-44537105 | None:intergenic | 20.0% |
| !!! | AATGTCAAAATTTGTTAATG+AGG | - | chr3.1:44539628-44539647 | MS.gene94948:intron | 20.0% |
| !!! | AGATTAGTTATTAATAACTG+AGG | + | chr3.1:44537114-44537133 | None:intergenic | 20.0% |
| !!! | AGTTTCTGTTATACTTTTTT+GGG | + | chr3.1:44537844-44537863 | None:intergenic | 20.0% |
| !!! | ATTTTATTATGATTCGTTAC+AGG | - | chr3.1:44537405-44537424 | MS.gene94948:CDS | 20.0% |
| !!! | GTTGTTATTTAACTTTGTTT+GGG | - | chr3.1:44537976-44537995 | MS.gene94948:CDS | 20.0% |
| !!! | TAGTTTCTGTTATACTTTTT+TGG | + | chr3.1:44537845-44537864 | None:intergenic | 20.0% |
| !!! | TGAAATTTTTGTCTAAATGA+AGG | - | chr3.1:44538952-44538971 | MS.gene94948:intron | 20.0% |
| !!! | TGTTGTTATTTAACTTTGTT+TGG | - | chr3.1:44537975-44537994 | MS.gene94948:CDS | 20.0% |
| !!! | TTGAAAAGTTTTCATGATTA+TGG | - | chr3.1:44538210-44538229 | MS.gene94948:CDS | 20.0% |
| !!! | TTGTGATGATGTTATTTAAT+TGG | - | chr3.1:44537523-44537542 | MS.gene94948:intron | 20.0% |
| ! | AAAAAATGTACCTGATCAAT+GGG | + | chr3.1:44538050-44538069 | None:intergenic | 25.0% |
| ! | ACAACATTATGAAGTTGTAT+CGG | - | chr3.1:44538652-44538671 | MS.gene94948:CDS | 25.0% |
| ! | ATTAAGGATAATAGATCAGA+TGG | - | chr3.1:44537786-44537805 | MS.gene94948:intron | 25.0% |
| ! | CTACAGTATATTCATCATAA+AGG | + | chr3.1:44539817-44539836 | None:intergenic | 25.0% |
| ! | TAAAATAGGTTTAGATGGTT+TGG | - | chr3.1:44537733-44537752 | MS.gene94948:intron | 25.0% |
| ! | TGAATTATCTTTCTTGGAAA+TGG | - | chr3.1:44538546-44538565 | MS.gene94948:intron | 25.0% |
| ! | TGGTATAAAATAGGTTTAGA+TGG | - | chr3.1:44537728-44537747 | MS.gene94948:intron | 25.0% |
| ! | TTTATCAACATGAATCCTAT+TGG | - | chr3.1:44537283-44537302 | MS.gene94948:CDS | 25.0% |
| ! | TTTGGAAAGATGCTTATAAT+TGG | - | chr3.1:44540049-44540068 | MS.gene94948:CDS | 25.0% |
| !! | AAAAGTTTTCATGATTATGG+TGG | - | chr3.1:44538213-44538232 | MS.gene94948:CDS | 25.0% |
| !! | ATTCATGTTGATAAATTGAG+GGG | + | chr3.1:44537278-44537297 | None:intergenic | 25.0% |
| !! | GATGATGTTATTTAATTGGA+CGG | - | chr3.1:44537527-44537546 | MS.gene94948:intron | 25.0% |
| !! | GATTCATGTTGATAAATTGA+GGG | + | chr3.1:44537279-44537298 | None:intergenic | 25.0% |
| !!! | ATGGATTGATTTTTCTTCTA+CGG | - | chr3.1:44538620-44538639 | MS.gene94948:intron | 25.0% |
| !!! | TATTAATTTGCTTCGTTAAC+TGG | - | chr3.1:44538743-44538762 | MS.gene94948:intron | 25.0% |
| !!! | TTGTTTTATCGTTTTTGTCA+TGG | - | chr3.1:44538068-44538087 | MS.gene94948:CDS | 25.0% |
| !!! | TTTAAGTTTTTGTAGCTTCT+AGG | - | chr3.1:44539728-44539747 | MS.gene94948:intron | 25.0% |
| !!! | TTTAAGTTTTTGTAGTCTCT+AGG | - | chr3.1:44539513-44539532 | MS.gene94948:intron | 25.0% |
| AAAATCTTCAATCATCTGAC+TGG | + | chr3.1:44540218-44540237 | None:intergenic | 30.0% | |
| AAATAAGTGTAGTAGAGAAG+AGG | - | chr3.1:44537613-44537632 | MS.gene94948:intron | 30.0% | |
| AATCAATCCATTGTTCAACA+TGG | + | chr3.1:44538611-44538630 | None:intergenic | 30.0% | |
| ACAGCAAATTACAAGTAGAA+TGG | + | chr3.1:44538581-44538600 | None:intergenic | 30.0% | |
| ACAGTCACATTCACTTATAA+TGG | + | chr3.1:44538113-44538132 | None:intergenic | 30.0% | |
| AGAGATTCCAAAGTTTATCA+TGG | - | chr3.1:44540120-44540139 | MS.gene94948:CDS | 30.0% | |
| ATCAATCCATTGTTCAACAT+GGG | + | chr3.1:44538610-44538629 | None:intergenic | 30.0% | |
| ATCCTTAATACATAATCCAC+TGG | + | chr3.1:44537775-44537794 | None:intergenic | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr3.1:44537682-44537701 | MS.gene94948:intron | 30.0% | |
| ATTCCACCAAACTAAGATTA+CGG | + | chr3.1:44538138-44538157 | None:intergenic | 30.0% | |
| CAAAAAATGTACCTGATCAA+TGG | + | chr3.1:44538051-44538070 | None:intergenic | 30.0% | |
| CATTCATCCATGATAAACTT+TGG | + | chr3.1:44540130-44540149 | None:intergenic | 30.0% | |
| CCAAATATCTTTCGGAAATT+TGG | + | chr3.1:44539190-44539209 | None:intergenic | 30.0% | |
| CCAAATTTCCGAAAGATATT+TGG | - | chr3.1:44539187-44539206 | MS.gene94948:intron | 30.0% | |
| CGGAAAAATATTCAGTAAGA+CGG | + | chr3.1:44538928-44538947 | None:intergenic | 30.0% | |
| GGAAAAATATTCAGTAAGAC+GGG | + | chr3.1:44538927-44538946 | None:intergenic | 30.0% | |
| TACAAGTAGAATGGAATATC+AGG | + | chr3.1:44538508-44538527 | None:intergenic | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr3.1:44537683-44537702 | MS.gene94948:intron | 30.0% | |
| ! | AGTGCTATGAGTTTGATTTA+AGG | - | chr3.1:44538270-44538289 | MS.gene94948:CDS | 30.0% |
| ! | GGATTCATGTTGATAAATTG+AGG | + | chr3.1:44537280-44537299 | None:intergenic | 30.0% |
| ! | TAACGAGTTGGATTGTAATA+TGG | - | chr3.1:44537884-44537903 | MS.gene94948:CDS | 30.0% |
| ! | TTGGGTGAAAACAATTTGTT+TGG | - | chr3.1:44538017-44538036 | MS.gene94948:CDS | 30.0% |
| ! | TTTTGTCTAAATGAAGGTAG+AGG | - | chr3.1:44538958-44538977 | MS.gene94948:intron | 30.0% |
| !! | ATTGATTTTGCTATCCAGAA+AGG | - | chr3.1:44537347-44537366 | MS.gene94948:CDS | 30.0% |
| !! | TACTTGTAATTTGCTGTTTC+AGG | - | chr3.1:44538584-44538603 | MS.gene94948:intron | 30.0% |
| !! | TTGATTTTGCTATCCAGAAA+GGG | - | chr3.1:44537348-44537367 | MS.gene94948:CDS | 30.0% |
| AAGTTGCTATAATGTCAGCA+AGG | + | chr3.1:44539072-44539091 | None:intergenic | 35.0% | |
| ACAATATTAGAGAGAGTTGG+GGG | - | chr3.1:44537685-44537704 | MS.gene94948:intron | 35.0% | |
| AGACTTAGAGATTAACGAGT+TGG | - | chr3.1:44537872-44537891 | MS.gene94948:CDS | 35.0% | |
| AGTTAGATCACTAGAAGTAG+AGG | - | chr3.1:44537814-44537833 | MS.gene94948:intron | 35.0% | |
| AGTTGCTATAATGTCAGCAA+GGG | + | chr3.1:44539071-44539090 | None:intergenic | 35.0% | |
| ATATCTTTCGGAAATTTGGC+TGG | + | chr3.1:44539186-44539205 | None:intergenic | 35.0% | |
| CAACATGAATCCTATTGGAA+AGG | - | chr3.1:44537288-44537307 | MS.gene94948:CDS | 35.0% | |
| CAGCGGTATTAAAGTTGAAT+TGG | - | chr3.1:44537219-44537238 | MS.gene94948:CDS | 35.0% | |
| GACAATATTAGAGAGAGTTG+GGG | - | chr3.1:44537684-44537703 | MS.gene94948:intron | 35.0% | |
| GCAACTTGCAACTTGTATTT+AGG | - | chr3.1:44539085-44539104 | MS.gene94948:intron | 35.0% | |
| GGTATTTGATTATGCTTCTG+TGG | - | chr3.1:44539697-44539716 | MS.gene94948:intron | 35.0% | |
| GTATTGTGATTACACTTCTG+TGG | - | chr3.1:44539482-44539501 | MS.gene94948:intron | 35.0% | |
| GTTTCTTCAAAGAATGGATC+TGG | - | chr3.1:44540012-44540031 | MS.gene94948:intron | 35.0% | |
| TAAAGATGCACCAAAGAAAG+TGG | - | chr3.1:44539291-44539310 | MS.gene94948:CDS | 35.0% | |
| TAACATCGTATGCAACTTAC+TGG | + | chr3.1:44538708-44538727 | None:intergenic | 35.0% | |
| TAACCTGGCCAAATATCTTT+CGG | + | chr3.1:44539198-44539217 | None:intergenic | 35.0% | |
| TCATCCAAAACCATCTTACT+TGG | + | chr3.1:44539406-44539425 | None:intergenic | 35.0% | |
| TCTTCAGCTTCTACAACTTT+GGG | + | chr3.1:44539337-44539356 | None:intergenic | 35.0% | |
| TGATTGTAGCTTATGTCGTT+TGG | - | chr3.1:44539755-44539774 | MS.gene94948:intron | 35.0% | |
| TTATGATTCGTTACAGGTTC+CGG | - | chr3.1:44537411-44537430 | MS.gene94948:CDS | 35.0% | |
| TTCCACCAAACTAAGATTAC+GGG | + | chr3.1:44538137-44538156 | None:intergenic | 35.0% | |
| ! | AGTTTTCATGATTATGGTGG+CGG | - | chr3.1:44538216-44538235 | MS.gene94948:CDS | 35.0% |
| ! | GAAGATTTTGAGCCATTTGA+GGG | - | chr3.1:44540229-44540248 | MS.gene94948:intron | 35.0% |
| ! | GTAATCTTAGTTTGGTGGAA+TGG | - | chr3.1:44538137-44538156 | MS.gene94948:CDS | 35.0% |
| ! | TACTACTCTAGCAGTGTTTT+TGG | - | chr3.1:44539783-44539802 | MS.gene94948:intron | 35.0% |
| ! | TCTGATTTAGCCACTTTCTT+TGG | + | chr3.1:44539304-44539323 | None:intergenic | 35.0% |
| ! | TGAAGATTTTGAGCCATTTG+AGG | - | chr3.1:44540228-44540247 | MS.gene94948:intron | 35.0% |
| ! | TTCTACAACTTTGGGCTTTT+CGG | + | chr3.1:44539329-44539348 | None:intergenic | 35.0% |
| ! | TTTGGTGCATCTTTAGTTGT+GGG | + | chr3.1:44539286-44539305 | None:intergenic | 35.0% |
| !! | ATCATTGAAGAGAGCATTTG+AGG | - | chr3.1:44538994-44539013 | MS.gene94948:intron | 35.0% |
| !! | GACCAGTGGATTATGTATTA+AGG | - | chr3.1:44537770-44537789 | MS.gene94948:intron | 35.0% |
| AACTTACTGGAGCAAAGTAG+GGG | + | chr3.1:44538695-44538714 | None:intergenic | 40.0% | |
| AAGAAGATCTAGGGGATTCT+TGG | + | chr3.1:44539380-44539399 | None:intergenic | 40.0% | |
| ACCTTTGATTGCGAGTCAAA+CGG | + | chr3.1:44539680-44539699 | None:intergenic | 40.0% | |
| ACTTGGAGGAAGAAGATCTA+GGG | + | chr3.1:44539389-44539408 | None:intergenic | 40.0% | |
| AGAAGATCTAGGGGATTCTT+GGG | + | chr3.1:44539379-44539398 | None:intergenic | 40.0% | |
| ATATGTAGAGAGAAGACCAG+TGG | - | chr3.1:44537756-44537775 | MS.gene94948:intron | 40.0% | |
| CAAAGTTGTAGAAGCTGAAG+AGG | - | chr3.1:44539336-44539355 | MS.gene94948:intron | 40.0% | |
| CAACTTACTGGAGCAAAGTA+GGG | + | chr3.1:44538696-44538715 | None:intergenic | 40.0% | |
| CATGGATGAATGCTATGACA+TGG | - | chr3.1:44540138-44540157 | MS.gene94948:CDS | 40.0% | |
| CTCATGTTGAGAGATACTTC+TGG | - | chr3.1:44539149-44539168 | MS.gene94948:intron | 40.0% | |
| CTCTTCAGCTTCTACAACTT+TGG | + | chr3.1:44539338-44539357 | None:intergenic | 40.0% | |
| CTGTACCCGTAATCTTAGTT+TGG | - | chr3.1:44538129-44538148 | MS.gene94948:CDS | 40.0% | |
| GAAACACCCATCTGAAAATC+TGG | + | chr3.1:44537247-44537266 | None:intergenic | 40.0% | |
| GGAATCTCTCGTGTTAATCA+TGG | - | chr3.1:44538163-44538182 | MS.gene94948:CDS | 40.0% | |
| GTAAGACCAACGATGATGTA+GGG | - | chr3.1:44537552-44537571 | MS.gene94948:intron | 40.0% | |
| TACTTGGAGGAAGAAGATCT+AGG | + | chr3.1:44539390-44539409 | None:intergenic | 40.0% | |
| TCAATTCCCTACATCATCGT+TGG | + | chr3.1:44537561-44537580 | None:intergenic | 40.0% | |
| TCCAAAACCATCTTACTTGG+AGG | + | chr3.1:44539403-44539422 | None:intergenic | 40.0% | |
| TCTCTCGTGTTAATCATGGA+TGG | - | chr3.1:44538167-44538186 | MS.gene94948:CDS | 40.0% | |
| TCTTCTTCCTCCAAGTAAGA+TGG | - | chr3.1:44539393-44539412 | MS.gene94948:intron | 40.0% | |
| TGTAAGACCAACGATGATGT+AGG | - | chr3.1:44537551-44537570 | MS.gene94948:intron | 40.0% | |
| TGTCTAAATGAAGGTAGAGG+AGG | - | chr3.1:44538961-44538980 | MS.gene94948:intron | 40.0% | |
| TTCTTAGCAGATGGAATAGG+TGG | + | chr3.1:44539238-44539257 | None:intergenic | 40.0% | |
| TTCTTTCGTGACACTGAACA+AGG | - | chr3.1:44539982-44540001 | MS.gene94948:intron | 40.0% | |
| TTTCCGAAAGATATTTGGCC+AGG | - | chr3.1:44539192-44539211 | MS.gene94948:intron | 40.0% | |
| ! | CTTTGGTGCATCTTTAGTTG+TGG | + | chr3.1:44539287-44539306 | None:intergenic | 40.0% |
| ! | TACCCGTAATCTTAGTTTGG+TGG | - | chr3.1:44538132-44538151 | MS.gene94948:CDS | 40.0% |
| ! | TCCTCCAAGTAAGATGGTTT+TGG | - | chr3.1:44539399-44539418 | MS.gene94948:intron | 40.0% |
| ! | TCTACAACTTTGGGCTTTTC+GGG | + | chr3.1:44539328-44539347 | None:intergenic | 40.0% |
| ! | TTGGCTCCAGATTTTCAGAT+GGG | - | chr3.1:44537238-44537257 | MS.gene94948:CDS | 40.0% |
| !! | AATTTCTCCGTTTGACTTGC+AGG | - | chr3.1:44539884-44539903 | MS.gene94948:CDS | 40.0% |
| !! | ACTTTGGAATCTCTTGTCCA+CGG | + | chr3.1:44540114-44540133 | None:intergenic | 40.0% |
| !! | ATTGGCTCCAGATTTTCAGA+TGG | - | chr3.1:44537237-44537256 | MS.gene94948:CDS | 40.0% |
| !! | CAGAAGTATCTCTCAACATG+AGG | + | chr3.1:44539151-44539170 | None:intergenic | 40.0% |
| !! | TGGTGGGTTTCTTCAAAGAA+TGG | - | chr3.1:44540006-44540025 | MS.gene94948:intron | 40.0% |
| !!! | GTAAGATGGTTTTGGATGAC+TGG | - | chr3.1:44539407-44539426 | MS.gene94948:intron | 40.0% |
| AAAAGAGCCTCTCCCTCAAA+TGG | + | chr3.1:44540244-44540263 | None:intergenic | 45.0% | |
| AACCAGAGAGAATATCCCTC+TGG | + | chr3.1:44539929-44539948 | None:intergenic | 45.0% | |
| AACCCCTTCACCTTAAATGG+AGG | + | chr3.1:44540082-44540101 | None:intergenic | 45.0% | |
| ACTTACTGGAGCAAAGTAGG+GGG | + | chr3.1:44538694-44538713 | None:intergenic | 45.0% | |
| ATCCAGAGGGATATTCTCTC+TGG | - | chr3.1:44539924-44539943 | MS.gene94948:intron | 45.0% | |
| ATCGCATTGCTCTCAAAGAC+GGG | + | chr3.1:44537457-44537476 | None:intergenic | 45.0% | |
| ATCTAGGGGATTCTTGGGTT+TGG | + | chr3.1:44539374-44539393 | None:intergenic | 45.0% | |
| ATGACATGGAGCTGTATGAG+TGG | - | chr3.1:44540152-44540171 | MS.gene94948:CDS | 45.0% | |
| CACAACCCCTTCACCTTAAA+TGG | + | chr3.1:44540085-44540104 | None:intergenic | 45.0% | |
| CAGTAAGACGGGAAGTTAAC+AGG | + | chr3.1:44538916-44538935 | None:intergenic | 45.0% | |
| CATCGCATTGCTCTCAAAGA+CGG | + | chr3.1:44537458-44537477 | None:intergenic | 45.0% | |
| CCAGAATCCTGCAAGTCAAA+CGG | + | chr3.1:44539894-44539913 | None:intergenic | 45.0% | |
| CGATGATGTAGGGAATTGAG+TGG | - | chr3.1:44537562-44537581 | MS.gene94948:intron | 45.0% | |
| CTCAACATGAGGAAACTCTG+AGG | + | chr3.1:44539140-44539159 | None:intergenic | 45.0% | |
| CTGATTGCTGCTGAATACAG+CGG | - | chr3.1:44537202-44537221 | MS.gene94948:CDS | 45.0% | |
| CTTGGAGGAAGAAGATCTAG+GGG | + | chr3.1:44539388-44539407 | None:intergenic | 45.0% | |
| GATGTAGGGAATTGAGTGGT+AGG | - | chr3.1:44537566-44537585 | MS.gene94948:intron | 45.0% | |
| GCAACTTACTGGAGCAAAGT+AGG | + | chr3.1:44538697-44538716 | None:intergenic | 45.0% | |
| GGGTTCTTAGCAGATGGAAT+AGG | + | chr3.1:44539241-44539260 | None:intergenic | 45.0% | |
| GTTGTGGGCTTAGATTCCTT+AGG | + | chr3.1:44539271-44539290 | None:intergenic | 45.0% | |
| TAGATTCCTTAGGCTGGGTA+GGG | + | chr3.1:44539261-44539280 | None:intergenic | 45.0% | |
| TAGCTTCAGTCTGCTTAACC+TGG | + | chr3.1:44539213-44539232 | None:intergenic | 45.0% | |
| TCTAGGGGATTCTTGGGTTT+GGG | + | chr3.1:44539373-44539392 | None:intergenic | 45.0% | |
| TGAGAGATACTTCTGGACCT+TGG | - | chr3.1:44539156-44539175 | MS.gene94948:intron | 45.0% | |
| TGGATCAGAGCCTCCATTTA+AGG | - | chr3.1:44540069-44540088 | MS.gene94948:CDS | 45.0% | |
| TGGATCATCTCCCATTGATC+AGG | - | chr3.1:44538037-44538056 | MS.gene94948:CDS | 45.0% | |
| TGGGACATGTATGATCCAGA+GGG | - | chr3.1:44539911-44539930 | MS.gene94948:intron | 45.0% | |
| TTAGATTCCTTAGGCTGGGT+AGG | + | chr3.1:44539262-44539281 | None:intergenic | 45.0% | |
| TTCAGGCCCATGTTGAACAA+TGG | - | chr3.1:44538601-44538620 | MS.gene94948:intron | 45.0% | |
| TTCGTGACACTGAACAAGGT+TGG | - | chr3.1:44539986-44540005 | MS.gene94948:intron | 45.0% | |
| TTTGCTGCAGTTGCACGATT+GGG | - | chr3.1:44537999-44538018 | MS.gene94948:CDS | 45.0% | |
| ! | ACCAAGCCTTATCCACAAAG+TGG | + | chr3.1:44537955-44537974 | None:intergenic | 45.0% |
| ! | AGAGCCTCCATTTAAGGTGA+AGG | - | chr3.1:44540075-44540094 | MS.gene94948:CDS | 45.0% |
| ! | AGCCTCCATTTAAGGTGAAG+GGG | - | chr3.1:44540077-44540096 | MS.gene94948:CDS | 45.0% |
| ! | ATTTGAGGGAGAGGCTCTTT+TGG | - | chr3.1:44540243-44540262 | MS.gene94948:intron | 45.0% |
| ! | CAAGCCTTATCCACAAAGTG+GGG | + | chr3.1:44537953-44537972 | None:intergenic | 45.0% |
| ! | CATTTAAGGTGAAGGGGTTG+TGG | - | chr3.1:44540083-44540102 | MS.gene94948:CDS | 45.0% |
| ! | CCAAGCCTTATCCACAAAGT+GGG | + | chr3.1:44537954-44537973 | None:intergenic | 45.0% |
| ! | CTTAGTTTGGTGGAATGGTG+TGG | - | chr3.1:44538142-44538161 | MS.gene94948:CDS | 45.0% |
| ! | GAAATTTGGCTGGTTGACCA+AGG | + | chr3.1:44539176-44539195 | None:intergenic | 45.0% |
| ! | GAGCCTCCATTTAAGGTGAA+GGG | - | chr3.1:44540076-44540095 | MS.gene94948:CDS | 45.0% |
| ! | TACCTTTGATAGCAACCTCG+CGG | + | chr3.1:44539465-44539484 | None:intergenic | 45.0% |
| ! | TCCGTTTGACTCGCAATCAA+AGG | - | chr3.1:44539676-44539695 | MS.gene94948:intron | 45.0% |
| ! | TGACACTGAACAAGGTTGGT+GGG | - | chr3.1:44539990-44540009 | MS.gene94948:intron | 45.0% |
| ! | TTTTGAGCCATTTGAGGGAG+AGG | - | chr3.1:44540234-44540253 | MS.gene94948:intron | 45.0% |
| !! | CGTTTGACTTGCAGGATTCT+GGG | - | chr3.1:44539892-44539911 | MS.gene94948:CDS | 45.0% |
| AACAGAATGCCCAACCAGGT+AGG | + | chr3.1:44539047-44539066 | None:intergenic | 50.0% | |
| ACGCTCTTTCTGAGCTTCGT+CGG | + | chr3.1:44540194-44540213 | None:intergenic | 50.0% | |
| ATGTAGTCGACCCCACTTTG+TGG | - | chr3.1:44537940-44537959 | MS.gene94948:CDS | 50.0% | |
| CCATCAGGTGTTTCCAAGAC+CGG | + | chr3.1:44537433-44537452 | None:intergenic | 50.0% | |
| CCCACAATACCTACCTGGTT+GGG | - | chr3.1:44539035-44539054 | MS.gene94948:intron | 50.0% | |
| CCCACTTTGTGGATAAGGCT+TGG | - | chr3.1:44537951-44537970 | MS.gene94948:CDS | 50.0% | |
| CTGGGACATGTATGATCCAG+AGG | - | chr3.1:44539910-44539929 | MS.gene94948:intron | 50.0% | |
| GGATTCTTGGGTTTGGGCTT+GGG | + | chr3.1:44539367-44539386 | None:intergenic | 50.0% | |
| GGGCTTAGATTCCTTAGGCT+GGG | + | chr3.1:44539266-44539285 | None:intergenic | 50.0% | |
| GTAGGGAATTGAGTGGTAGG+CGG | - | chr3.1:44537569-44537588 | MS.gene94948:intron | 50.0% | |
| GTGACACTGAACAAGGTTGG+TGG | - | chr3.1:44539989-44540008 | MS.gene94948:intron | 50.0% | |
| TAAGAACCCTACCCAGCCTA+AGG | - | chr3.1:44539252-44539271 | MS.gene94948:intron | 50.0% | |
| TAGATCCTGCACGCTCAGAA+GGG | - | chr3.1:44537157-44537176 | MS.gene94948:CDS | 50.0% | |
| TAGGGGGAAAATCCACGTCT+TGG | + | chr3.1:44538678-44538697 | None:intergenic | 50.0% | |
| TCGACCCCACTTTGTGGATA+AGG | - | chr3.1:44537946-44537965 | MS.gene94948:CDS | 50.0% | |
| TGGGCTTAGATTCCTTAGGC+TGG | + | chr3.1:44539267-44539286 | None:intergenic | 50.0% | |
| TGGGTAGGGTTCTTAGCAGA+TGG | + | chr3.1:44539247-44539266 | None:intergenic | 50.0% | |
| TTCCGCGAGGTTGCTATCAA+AGG | - | chr3.1:44539460-44539479 | MS.gene94948:intron | 50.0% | |
| TTCGTCGGAGATGTCAACCT+TGG | + | chr3.1:44540179-44540198 | None:intergenic | 50.0% | |
| TTCGTTACAGGTTCCGGTCT+TGG | - | chr3.1:44537417-44537436 | MS.gene94948:CDS | 50.0% | |
| ! | AAGTTGTATCGGCCAAGACG+TGG | - | chr3.1:44538663-44538682 | MS.gene94948:CDS | 50.0% |
| ! | CCCAACCAGGTAGGTATTGT+GGG | + | chr3.1:44539038-44539057 | None:intergenic | 50.0% |
| ! | CGTCTTTGAGAGCAATGCGA+TGG | - | chr3.1:44537456-44537475 | MS.gene94948:intron | 50.0% |
| ! | GTTTGCTGCAGTTGCACGAT+TGG | - | chr3.1:44537998-44538017 | MS.gene94948:CDS | 50.0% |
| !! | CCGTTTGACTTGCAGGATTC+TGG | - | chr3.1:44539891-44539910 | MS.gene94948:CDS | 50.0% |
| !! | CTGGCTCGCAAGTATGCTTT+TGG | - | chr3.1:44540031-44540050 | MS.gene94948:intron | 50.0% |
| AACCTCGCGGAAGTTGGACT+TGG | + | chr3.1:44539452-44539471 | None:intergenic | 55.0% | |
| AGCAATGCGATGGCTCGCTA+TGG | - | chr3.1:44537466-44537485 | MS.gene94948:intron | 55.0% | |
| CCGGTCTTGGAAACACCTGA+TGG | - | chr3.1:44537430-44537449 | MS.gene94948:intron | 55.0% | |
| CCTTGCCCACAATACCTACC+TGG | - | chr3.1:44539030-44539049 | MS.gene94948:intron | 55.0% | |
| CTCTCAAAGACGGGACCATC+AGG | + | chr3.1:44537448-44537467 | None:intergenic | 55.0% | |
| GATAGCAACCTCGCGGAAGT+TGG | + | chr3.1:44539458-44539477 | None:intergenic | 55.0% | |
| GCCCACAATACCTACCTGGT+TGG | - | chr3.1:44539034-44539053 | MS.gene94948:intron | 55.0% | |
| GCTGCAGTGCTATCCCTTTC+TGG | + | chr3.1:44537364-44537383 | None:intergenic | 55.0% | |
| GGAGCTGTATGAGTGGACCA+AGG | - | chr3.1:44540159-44540178 | MS.gene94948:CDS | 55.0% | |
| GGGATTCTTGGGTTTGGGCT+TGG | + | chr3.1:44539368-44539387 | None:intergenic | 55.0% | |
| GGGTAACAGAATGCCCAACC+AGG | + | chr3.1:44539051-44539070 | None:intergenic | 55.0% | |
| GTAGATCCTGCACGCTCAGA+AGG | - | chr3.1:44537156-44537175 | MS.gene94948:CDS | 55.0% | |
| TGTTTCCCTTCTGAGCGTGC+AGG | + | chr3.1:44537165-44537184 | None:intergenic | 55.0% | |
| ! | AAGGGGTTGTGGCTTTTCCG+TGG | - | chr3.1:44540094-44540113 | MS.gene94948:CDS | 55.0% |
| ! | CCAGGTAGGTATTGTGGGCA+AGG | + | chr3.1:44539033-44539052 | None:intergenic | 55.0% |
| ! | GCCCAACCAGGTAGGTATTG+TGG | + | chr3.1:44539039-44539058 | None:intergenic | 55.0% |
| CACCAAGTCCAACTTCCGCG+AGG | - | chr3.1:44539447-44539466 | MS.gene94948:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 44537059 | 44540285 | 44537059 | ID=MS.gene94948 |
| chr3.1 | mRNA | 44537059 | 44540285 | 44537059 | ID=MS.gene94948.t1;Parent=MS.gene94948 |
| chr3.1 | exon | 44540277 | 44540285 | 44540277 | ID=MS.gene94948.t1.exon1;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44540277 | 44540285 | 44540277 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44540035 | 44540184 | 44540035 | ID=MS.gene94948.t1.exon2;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44540035 | 44540184 | 44540035 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44539857 | 44539917 | 44539857 | ID=MS.gene94948.t1.exon3;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44539857 | 44539917 | 44539857 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44539286 | 44539335 | 44539286 | ID=MS.gene94948.t1.exon4;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44539286 | 44539335 | 44539286 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44538637 | 44538738 | 44538637 | ID=MS.gene94948.t1.exon5;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44538637 | 44538738 | 44538637 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44537863 | 44538370 | 44537863 | ID=MS.gene94948.t1.exon6;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44537863 | 44538370 | 44537863 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| chr3.1 | exon | 44537059 | 44537438 | 44537059 | ID=MS.gene94948.t1.exon7;Parent=MS.gene94948.t1 |
| chr3.1 | CDS | 44537059 | 44537438 | 44537059 | ID=cds.MS.gene94948.t1;Parent=MS.gene94948.t1 |
| Gene Sequence |
| Protein sequence |
