Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043260.t1 | XP_024635875.1 | 92.3 | 196 | 15 | 0 | 6 | 201 | 819 | 1014 | 2.90E-94 | 354.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043260.t1 | Q9LK64 | 58.7 | 196 | 79 | 2 | 6 | 201 | 835 | 1028 | 1.2e-59 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043260.t1 | G7ZVH8 | 92.3 | 196 | 15 | 0 | 6 | 201 | 872 | 1067 | 2.1e-94 | 354.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63929 | MS.gene043260 | PPI |
| MS.gene046213 | MS.gene043260 | PPI |
| MS.gene88462 | MS.gene043260 | PPI |
| MS.gene043260 | MS.gene93729 | PPI |
| MS.gene039628 | MS.gene043260 | PPI |
| MS.gene61079 | MS.gene043260 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043260.t1 | MTR_3g056705 | 92.347 | 196 | 15 | 0 | 6 | 201 | 872 | 1067 | 2.90e-120 | 373 |
| MS.gene043260.t1 | MTR_5g094830 | 68.367 | 196 | 51 | 2 | 6 | 201 | 825 | 1009 | 2.23e-82 | 267 |
| MS.gene043260.t1 | MTR_5g033030 | 66.837 | 196 | 60 | 3 | 6 | 201 | 814 | 1004 | 3.99e-80 | 260 |
| MS.gene043260.t1 | MTR_5g094810 | 67.005 | 197 | 52 | 3 | 6 | 201 | 810 | 994 | 9.41e-80 | 259 |
| MS.gene043260.t1 | MTR_5g033320 | 64.286 | 196 | 64 | 4 | 6 | 201 | 805 | 994 | 8.37e-75 | 245 |
| MS.gene043260.t1 | MTR_3g056700 | 50.242 | 207 | 101 | 2 | 6 | 212 | 625 | 829 | 2.25e-62 | 209 |
| MS.gene043260.t1 | MTR_3g056675 | 49.275 | 207 | 103 | 2 | 6 | 212 | 572 | 776 | 6.44e-58 | 197 |
| MS.gene043260.t1 | MTR_3g056645 | 49.515 | 206 | 102 | 2 | 7 | 212 | 1 | 204 | 6.50e-58 | 194 |
| MS.gene043260.t1 | MTR_7g098690 | 39.462 | 223 | 117 | 3 | 6 | 212 | 818 | 1038 | 1.03e-42 | 153 |
| MS.gene043260.t1 | MTR_1g069450 | 42.105 | 209 | 103 | 3 | 6 | 200 | 838 | 1042 | 3.10e-42 | 152 |
| MS.gene043260.t1 | MTR_1g088680 | 31.156 | 199 | 121 | 4 | 6 | 200 | 845 | 1031 | 9.04e-26 | 104 |
| MS.gene043260.t1 | MTR_8g080050 | 33.673 | 196 | 107 | 6 | 6 | 200 | 783 | 956 | 2.85e-25 | 103 |
| MS.gene043260.t1 | MTR_8g015970 | 31.731 | 208 | 129 | 4 | 6 | 212 | 615 | 810 | 1.58e-23 | 98.2 |
| MS.gene043260.t1 | MTR_8g015970 | 31.731 | 208 | 129 | 4 | 6 | 212 | 615 | 810 | 1.70e-23 | 98.2 |
| MS.gene043260.t1 | MTR_8g015970 | 31.731 | 208 | 129 | 4 | 6 | 212 | 619 | 814 | 1.82e-23 | 98.2 |
| MS.gene043260.t1 | MTR_8g015970 | 31.731 | 208 | 129 | 4 | 6 | 212 | 619 | 814 | 1.86e-23 | 98.2 |
| MS.gene043260.t1 | MTR_6g084320 | 28.986 | 207 | 123 | 4 | 6 | 212 | 782 | 964 | 3.13e-22 | 94.7 |
| MS.gene043260.t1 | MTR_6g084320 | 28.986 | 207 | 123 | 4 | 6 | 212 | 782 | 964 | 4.44e-22 | 94.0 |
| MS.gene043260.t1 | MTR_2g436710 | 30.102 | 196 | 124 | 4 | 6 | 200 | 836 | 1019 | 2.46e-21 | 92.0 |
| MS.gene043260.t1 | MTR_8g015980 | 27.830 | 212 | 121 | 4 | 6 | 212 | 791 | 975 | 3.12e-20 | 89.0 |
| MS.gene043260.t1 | MTR_8g016020 | 28.986 | 207 | 126 | 5 | 6 | 212 | 573 | 758 | 3.81e-20 | 88.6 |
| MS.gene043260.t1 | MTR_8g040170 | 28.571 | 210 | 133 | 4 | 6 | 212 | 444 | 639 | 4.47e-20 | 88.2 |
| MS.gene043260.t1 | MTR_8g040170 | 28.571 | 210 | 133 | 4 | 6 | 212 | 604 | 799 | 4.60e-20 | 88.2 |
| MS.gene043260.t1 | MTR_8g040620 | 29.469 | 207 | 127 | 4 | 6 | 212 | 794 | 981 | 1.03e-19 | 87.4 |
| MS.gene043260.t1 | MTR_6g034270 | 27.979 | 193 | 116 | 4 | 6 | 198 | 633 | 802 | 8.72e-19 | 84.7 |
| MS.gene043260.t1 | MTR_8g016010 | 27.536 | 207 | 139 | 2 | 6 | 212 | 146 | 341 | 1.26e-18 | 84.0 |
| MS.gene043260.t1 | MTR_6g034335 | 26.667 | 195 | 121 | 4 | 6 | 200 | 820 | 992 | 5.75e-18 | 82.4 |
| MS.gene043260.t1 | MTR_6g034230 | 27.692 | 195 | 118 | 4 | 6 | 200 | 816 | 987 | 1.08e-17 | 81.3 |
| MS.gene043260.t1 | MTR_8g016070 | 31.472 | 197 | 110 | 5 | 6 | 198 | 801 | 976 | 1.28e-17 | 81.3 |
| MS.gene043260.t1 | MTR_2g436730 | 27.778 | 198 | 121 | 4 | 6 | 197 | 834 | 1015 | 3.27e-17 | 80.1 |
| MS.gene043260.t1 | MTR_1g099280 | 29.231 | 195 | 118 | 4 | 6 | 200 | 814 | 988 | 4.05e-17 | 79.7 |
| MS.gene043260.t1 | MTR_8g061970 | 27.094 | 203 | 123 | 4 | 6 | 200 | 831 | 1016 | 4.07e-17 | 79.7 |
| MS.gene043260.t1 | MTR_1g099280 | 29.231 | 195 | 118 | 4 | 6 | 200 | 839 | 1013 | 4.07e-17 | 79.7 |
| MS.gene043260.t1 | MTR_1g099280 | 29.231 | 195 | 118 | 4 | 6 | 200 | 814 | 988 | 4.64e-17 | 79.7 |
| MS.gene043260.t1 | MTR_0196s0020 | 26.396 | 197 | 118 | 5 | 6 | 200 | 816 | 987 | 1.99e-16 | 77.8 |
| MS.gene043260.t1 | MTR_2g436680 | 27.692 | 195 | 127 | 3 | 6 | 200 | 836 | 1016 | 8.80e-16 | 75.9 |
| MS.gene043260.t1 | MTR_6g034265 | 26.667 | 195 | 120 | 4 | 6 | 200 | 814 | 985 | 1.19e-15 | 75.5 |
| MS.gene043260.t1 | MTR_6g034755 | 25.128 | 195 | 124 | 3 | 6 | 200 | 823 | 995 | 2.23e-15 | 74.7 |
| MS.gene043260.t1 | MTR_6g034310 | 26.667 | 195 | 117 | 4 | 6 | 200 | 802 | 970 | 9.72e-15 | 72.8 |
| MS.gene043260.t1 | MTR_0019s0020 | 27.179 | 195 | 119 | 4 | 6 | 200 | 766 | 937 | 9.96e-15 | 72.8 |
| MS.gene043260.t1 | MTR_0019s0020 | 27.179 | 195 | 119 | 4 | 6 | 200 | 766 | 937 | 9.97e-15 | 72.8 |
| MS.gene043260.t1 | MTR_0019s0020 | 27.179 | 195 | 119 | 4 | 6 | 200 | 766 | 937 | 1.01e-14 | 72.8 |
| MS.gene043260.t1 | MTR_0019s0020 | 27.179 | 195 | 119 | 4 | 6 | 200 | 766 | 937 | 1.01e-14 | 72.8 |
| MS.gene043260.t1 | MTR_6g034310 | 27.083 | 192 | 114 | 4 | 6 | 197 | 444 | 609 | 1.02e-14 | 72.8 |
| MS.gene043260.t1 | MTR_0019s0020 | 27.179 | 195 | 119 | 4 | 6 | 200 | 766 | 937 | 1.16e-14 | 72.4 |
| MS.gene043260.t1 | MTR_6g034310 | 26.667 | 195 | 117 | 4 | 6 | 200 | 802 | 970 | 1.22e-14 | 72.4 |
| MS.gene043260.t1 | MTR_8g042520 | 26.562 | 192 | 115 | 5 | 6 | 197 | 13 | 178 | 4.04e-14 | 70.9 |
| MS.gene043260.t1 | MTR_6g034220 | 27.692 | 195 | 118 | 4 | 6 | 200 | 815 | 986 | 7.34e-14 | 70.1 |
| MS.gene043260.t1 | MTR_6g034350 | 23.077 | 195 | 128 | 3 | 6 | 200 | 823 | 995 | 5.84e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043260.t1 | AT1G71330 | 57.005 | 207 | 86 | 3 | 6 | 212 | 107 | 310 | 2.10e-77 | 235 |
| MS.gene043260.t1 | AT3G13080 | 57.488 | 207 | 85 | 3 | 6 | 212 | 835 | 1038 | 1.63e-75 | 246 |
| MS.gene043260.t1 | AT3G13080 | 57.488 | 207 | 85 | 3 | 6 | 212 | 835 | 1038 | 1.63e-75 | 246 |
| MS.gene043260.t1 | AT3G13080 | 57.488 | 207 | 85 | 3 | 6 | 212 | 835 | 1038 | 4.42e-75 | 246 |
| MS.gene043260.t1 | AT3G13080 | 57.488 | 207 | 85 | 3 | 6 | 212 | 835 | 1038 | 4.63e-75 | 246 |
| MS.gene043260.t1 | AT3G13080 | 57.488 | 207 | 85 | 3 | 6 | 212 | 835 | 1038 | 4.85e-75 | 246 |
| MS.gene043260.t1 | AT3G13100 | 56.039 | 207 | 77 | 3 | 6 | 212 | 819 | 1011 | 8.39e-66 | 219 |
| MS.gene043260.t1 | AT3G13100 | 56.039 | 207 | 77 | 3 | 6 | 212 | 574 | 766 | 8.86e-66 | 219 |
| MS.gene043260.t1 | AT3G13090 | 52.174 | 207 | 86 | 3 | 6 | 212 | 796 | 989 | 9.37e-64 | 214 |
| MS.gene043260.t1 | AT1G04120 | 41.038 | 212 | 106 | 4 | 6 | 200 | 782 | 991 | 1.07e-39 | 144 |
| MS.gene043260.t1 | AT1G04120 | 41.038 | 212 | 106 | 4 | 6 | 200 | 817 | 1026 | 1.21e-39 | 144 |
| MS.gene043260.t1 | AT1G04120 | 41.038 | 212 | 106 | 4 | 6 | 200 | 817 | 1026 | 1.23e-39 | 144 |
| MS.gene043260.t1 | AT3G60160 | 36.410 | 195 | 118 | 2 | 6 | 200 | 825 | 1013 | 3.58e-34 | 129 |
| MS.gene043260.t1 | AT3G60160 | 36.410 | 195 | 118 | 2 | 6 | 200 | 825 | 1013 | 4.26e-34 | 129 |
| MS.gene043260.t1 | AT3G60160 | 36.410 | 195 | 118 | 2 | 6 | 200 | 789 | 977 | 4.29e-34 | 129 |
| MS.gene043260.t1 | AT3G60970 | 34.872 | 195 | 84 | 3 | 6 | 200 | 409 | 560 | 5.46e-27 | 108 |
| MS.gene043260.t1 | AT2G47800 | 29.808 | 208 | 128 | 4 | 3 | 200 | 833 | 1032 | 8.11e-23 | 96.3 |
| MS.gene043260.t1 | AT3G62700 | 29.018 | 224 | 128 | 4 | 6 | 200 | 834 | 1055 | 1.34e-20 | 90.1 |
| MS.gene043260.t1 | AT3G21250 | 30.542 | 203 | 109 | 4 | 5 | 198 | 787 | 966 | 3.48e-17 | 80.1 |
| MS.gene043260.t1 | AT3G21250 | 30.542 | 203 | 109 | 4 | 5 | 198 | 781 | 960 | 3.86e-17 | 79.7 |
| MS.gene043260.t1 | AT3G21250 | 29.630 | 216 | 120 | 4 | 6 | 212 | 793 | 985 | 4.85e-17 | 79.7 |
| MS.gene043260.t1 | AT3G21250 | 29.630 | 216 | 120 | 4 | 6 | 212 | 799 | 991 | 5.00e-17 | 79.7 |
| MS.gene043260.t1 | AT3G21250 | 29.630 | 216 | 120 | 4 | 6 | 212 | 377 | 569 | 5.57e-17 | 79.3 |
| MS.gene043260.t1 | AT3G21250 | 29.630 | 216 | 120 | 4 | 6 | 212 | 377 | 569 | 5.57e-17 | 79.3 |
| MS.gene043260.t1 | AT3G59140 | 26.667 | 195 | 117 | 4 | 6 | 200 | 797 | 965 | 1.81e-16 | 77.8 |
Find 32 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTGGAAGCAACTAT+TGG | 0.238628 | 7.2:+87810777 | MS.gene043260:CDS |
| ATGTTTCAACTTCTTCAAAT+TGG | 0.277828 | 7.2:+87810764 | MS.gene043260:CDS |
| GAAAGAGAGCAAGGTAAAGT+TGG | 0.353443 | 7.2:+87810665 | MS.gene043260:CDS |
| TCTTGAACAAGTTGTCGTTT+TGG | 0.370037 | 7.2:-87810638 | None:intergenic |
| AAAGAGAGCAAGGTAAAGTT+GGG | 0.433227 | 7.2:+87810666 | MS.gene043260:CDS |
| CCTGTTGTGATGTACTTATC+TGG | 0.444623 | 7.2:-87810529 | None:intergenic |
| AAATATATCACGACAGCATA+TGG | 0.450488 | 7.2:+87810704 | MS.gene043260:CDS |
| CCAGATAAGTACATCACAAC+AGG | 0.482922 | 7.2:+87810529 | MS.gene043260:CDS |
| AGGAGTGTAGTTCCTCGAAC+AGG | 0.499646 | 7.2:-87810839 | None:intergenic |
| TCTGCACTTGATTCATCAGA+TGG | 0.504417 | 7.2:+87810488 | MS.gene043260:CDS |
| AATTGGAAGCAACTATTGGA+TGG | 0.509516 | 7.2:+87810781 | MS.gene043260:CDS |
| CAACAAGAGTTGCTCTAGAT+AGG | 0.511129 | 7.2:-87810904 | None:intergenic |
| CCATGTGTCTCTCTTCCTCT+CGG | 0.512974 | 7.2:+87810554 | MS.gene043260:CDS |
| GCAACTCTTGTTGTCACCGT+TGG | 0.514424 | 7.2:+87810914 | MS.gene043260:CDS |
| GACACATAAAGAACTTCCTA+TGG | 0.530280 | 7.2:-87810882 | None:intergenic |
| GAGAAGAAAGAAGTACAGAA+TGG | 0.536785 | 7.2:+87810593 | MS.gene043260:CDS |
| GATGTGGAGCCACCTGTTCG+AGG | 0.554467 | 7.2:+87810827 | MS.gene043260:CDS |
| CCACACCTACATAGACAACT+AGG | 0.557019 | 7.2:-87810859 | None:intergenic |
| AACTCCCATCTCAAAAGATG+TGG | 0.570549 | 7.2:+87810811 | MS.gene043260:CDS |
| CAAGAAGAAGAAAGAGAGCA+AGG | 0.570892 | 7.2:+87810656 | MS.gene043260:CDS |
| CCTAGTTGTCTATGTAGGTG+TGG | 0.574400 | 7.2:+87810859 | MS.gene043260:CDS |
| ACACTCCTAGTTGTCTATGT+AGG | 0.580169 | 7.2:+87810854 | MS.gene043260:CDS |
| GATGGGGAAATTACTCAATG+TGG | 0.583724 | 7.2:+87810395 | MS.gene043260:CDS |
| AAGAAAGAAGTACAGAATGG+TGG | 0.595879 | 7.2:+87810596 | MS.gene043260:CDS |
| TATAATGATCTACTCAACTC+AGG | 0.598290 | 7.2:+87810422 | MS.gene043260:CDS |
| CTTGATTCATCAGATGGAGA+TGG | 0.618017 | 7.2:+87810494 | MS.gene043260:CDS |
| GTCTATGTAGGTGTGGCCAT+AGG | 0.623766 | 7.2:+87810866 | MS.gene043260:CDS |
| CCGAGAGGAAGAGAGACACA+TGG | 0.627029 | 7.2:-87810554 | None:intergenic |
| AGTGTAGTTCCTCGAACAGG+TGG | 0.627973 | 7.2:-87810836 | None:intergenic |
| ATTTCAGCTATCAATATGAG+TGG | 0.654447 | 7.2:-87810740 | None:intergenic |
| AGTAGCTGTCTTATAACCAA+CGG | 0.661479 | 7.2:-87810930 | None:intergenic |
| TATATCACGACAGCATATGG+AGG | 0.683585 | 7.2:+87810707 | MS.gene043260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATTTTATGGAACTTAT+TGG | + | chr7.2:87810446-87810465 | MS.gene043260:CDS | 20.0% |
| ! | ATGTTTCAACTTCTTCAAAT+TGG | + | chr7.2:87810764-87810783 | MS.gene043260:CDS | 25.0% |
| !!! | GTTTTAAGGTTATGAAAGAT+GGG | + | chr7.2:87810378-87810397 | MS.gene043260:CDS | 25.0% |
| !!! | TGTTTTAAGGTTATGAAAGA+TGG | + | chr7.2:87810377-87810396 | MS.gene043260:CDS | 25.0% |
| !!! | TTTTAAGGTTATGAAAGATG+GGG | + | chr7.2:87810379-87810398 | MS.gene043260:CDS | 25.0% |
| AAATATATCACGACAGCATA+TGG | + | chr7.2:87810704-87810723 | MS.gene043260:CDS | 30.0% | |
| ATTTCAGCTATCAATATGAG+TGG | - | chr7.2:87810743-87810762 | None:intergenic | 30.0% | |
| TATAATGATCTACTCAACTC+AGG | + | chr7.2:87810422-87810441 | MS.gene043260:CDS | 30.0% | |
| TTCAAATTGGAAGCAACTAT+TGG | + | chr7.2:87810777-87810796 | MS.gene043260:CDS | 30.0% | |
| AAAGAGAGCAAGGTAAAGTT+GGG | + | chr7.2:87810666-87810685 | MS.gene043260:CDS | 35.0% | |
| AATTGGAAGCAACTATTGGA+TGG | + | chr7.2:87810781-87810800 | MS.gene043260:CDS | 35.0% | |
| AGTAGCTGTCTTATAACCAA+CGG | - | chr7.2:87810933-87810952 | None:intergenic | 35.0% | |
| GACACATAAAGAACTTCCTA+TGG | - | chr7.2:87810885-87810904 | None:intergenic | 35.0% | |
| ! | AAGAAAGAAGTACAGAATGG+TGG | + | chr7.2:87810596-87810615 | MS.gene043260:CDS | 35.0% |
| ! | CAACTCAGGCACAAATTTTA+TGG | + | chr7.2:87810436-87810455 | MS.gene043260:CDS | 35.0% |
| ! | GAGAAGAAAGAAGTACAGAA+TGG | + | chr7.2:87810593-87810612 | MS.gene043260:CDS | 35.0% |
| !! | TCTTGAACAAGTTGTCGTTT+TGG | - | chr7.2:87810641-87810660 | None:intergenic | 35.0% |
| AACTCCCATCTCAAAAGATG+TGG | + | chr7.2:87810811-87810830 | MS.gene043260:CDS | 40.0% | |
| ACACTCCTAGTTGTCTATGT+AGG | + | chr7.2:87810854-87810873 | MS.gene043260:CDS | 40.0% | |
| CAAGAAGAAGAAAGAGAGCA+AGG | + | chr7.2:87810656-87810675 | MS.gene043260:CDS | 40.0% | |
| CCAGATAAGTACATCACAAC+AGG | + | chr7.2:87810529-87810548 | MS.gene043260:CDS | 40.0% | |
| CCTGTTGTGATGTACTTATC+TGG | - | chr7.2:87810532-87810551 | None:intergenic | 40.0% | |
| CTTGATTCATCAGATGGAGA+TGG | + | chr7.2:87810494-87810513 | MS.gene043260:CDS | 40.0% | |
| GAAAGAGAGCAAGGTAAAGT+TGG | + | chr7.2:87810665-87810684 | MS.gene043260:CDS | 40.0% | |
| GATGGGGAAATTACTCAATG+TGG | + | chr7.2:87810395-87810414 | MS.gene043260:CDS | 40.0% | |
| TATATCACGACAGCATATGG+AGG | + | chr7.2:87810707-87810726 | MS.gene043260:CDS | 40.0% | |
| TCTGCACTTGATTCATCAGA+TGG | + | chr7.2:87810488-87810507 | MS.gene043260:CDS | 40.0% | |
| ! | CAACAAGAGTTGCTCTAGAT+AGG | - | chr7.2:87810907-87810926 | None:intergenic | 40.0% |
| ! | GCAAGGTAAAGTTGGGTTTT+CGG | + | chr7.2:87810673-87810692 | MS.gene043260:CDS | 40.0% |
| ! | TCTATTTTGTCAACACCGAG+AGG | - | chr7.2:87810572-87810591 | None:intergenic | 40.0% |
| CCACACCTACATAGACAACT+AGG | - | chr7.2:87810862-87810881 | None:intergenic | 45.0% | |
| CCTAGTTGTCTATGTAGGTG+TGG | + | chr7.2:87810859-87810878 | MS.gene043260:CDS | 45.0% | |
| !! | AAGTTGGGTTTTCGGTGTAC+TGG | + | chr7.2:87810681-87810700 | MS.gene043260:CDS | 45.0% |
| !! | TGGCTCCACATCTTTTGAGA+TGG | - | chr7.2:87810819-87810838 | None:intergenic | 45.0% |
| !!! | GGCTCCACATCTTTTGAGAT+GGG | - | chr7.2:87810818-87810837 | None:intergenic | 45.0% |
| AGTGTAGTTCCTCGAACAGG+TGG | - | chr7.2:87810839-87810858 | None:intergenic | 50.0% | |
| CCATGTGTCTCTCTTCCTCT+CGG | + | chr7.2:87810554-87810573 | MS.gene043260:CDS | 50.0% | |
| GTCTATGTAGGTGTGGCCAT+AGG | + | chr7.2:87810866-87810885 | MS.gene043260:CDS | 50.0% | |
| TTGGAGCGCGAAAAATGCAG+AGG | - | chr7.2:87810977-87810996 | None:intergenic | 50.0% | |
| ! | AGGAGTGTAGTTCCTCGAAC+AGG | - | chr7.2:87810842-87810861 | None:intergenic | 50.0% |
| ! | GCAACTCTTGTTGTCACCGT+TGG | + | chr7.2:87810914-87810933 | MS.gene043260:CDS | 50.0% |
| CCGAGAGGAAGAGAGACACA+TGG | - | chr7.2:87810557-87810576 | None:intergenic | 55.0% | |
| GATGTGGAGCCACCTGTTCG+AGG | + | chr7.2:87810827-87810846 | MS.gene043260:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 87810371 | 87811009 | 87810371 | ID=MS.gene043260 |
| chr7.2 | mRNA | 87810371 | 87811009 | 87810371 | ID=MS.gene043260.t1;Parent=MS.gene043260 |
| chr7.2 | exon | 87810371 | 87811009 | 87810371 | ID=MS.gene043260.t1.exon1;Parent=MS.gene043260.t1 |
| chr7.2 | CDS | 87810371 | 87811009 | 87810371 | ID=cds.MS.gene043260.t1;Parent=MS.gene043260.t1 |
| Gene Sequence |
| Protein sequence |
