AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044157


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044157.t1 MTR_3g079750 98.724 627 8 0 1 627 1 627 0.0 1278
MS.gene044157.t1 MTR_6g028090 77.010 622 143 0 1 622 1 622 0.0 1017
MS.gene044157.t1 MTR_6g028100 75.879 626 151 0 1 626 1 626 0.0 1007
MS.gene044157.t1 MTR_6g028120 76.949 603 139 0 20 622 1 603 0.0 984
MS.gene044157.t1 MTR_6g028110 74.163 627 161 1 1 626 1 627 0.0 976
MS.gene044157.t1 MTR_2g030000 73.836 623 159 2 4 622 2 624 0.0 976
MS.gene044157.t1 MTR_6g028110 74.163 627 161 1 1 626 1 627 0.0 975
MS.gene044157.t1 MTR_7g086030 68.581 627 196 1 1 626 1 627 0.0 911
MS.gene044157.t1 MTR_7g086030 70.167 600 179 0 27 626 3 602 0.0 907
MS.gene044157.t1 MTR_3g462820 57.756 606 243 4 22 620 16 615 0.0 719
MS.gene044157.t1 MTR_5g069800 54.667 600 267 4 28 623 5 603 0.0 680
MS.gene044157.t1 MTR_5g069740 54.333 600 257 5 28 623 5 591 0.0 664
MS.gene044157.t1 MTR_7g086010 64.346 474 156 3 1 463 1 472 0.0 614
MS.gene044157.t1 MTR_5g062650 26.462 650 358 26 37 627 59 647 1.25e-41 161
MS.gene044157.t1 MTR_5g062370 28.154 650 348 28 35 627 57 644 2.37e-41 160
MS.gene044157.t1 MTR_3g074060 25.970 670 375 28 16 627 30 636 4.08e-41 160
MS.gene044157.t1 MTR_5g062320 26.953 653 352 28 35 627 55 642 2.38e-40 157
MS.gene044157.t1 MTR_4g094285 27.127 623 352 26 28 612 54 612 8.72e-40 156
MS.gene044157.t1 MTR_5g062430 26.677 656 350 28 35 627 57 644 2.34e-39 155
MS.gene044157.t1 MTR_5g062370 28.353 589 322 25 35 584 57 584 1.68e-37 147
MS.gene044157.t1 MTR_2g008240 26.122 624 357 26 28 612 55 613 3.35e-34 139
MS.gene044157.t1 MTR_2g034720 24.408 676 381 29 11 621 11 621 8.37e-33 135
MS.gene044157.t1 MTR_7g109390 25.418 598 348 27 32 595 46 579 9.80e-30 125
MS.gene044157.t1 MTR_1g106860 25.352 639 361 30 38 621 48 625 1.45e-29 125
MS.gene044157.t1 MTR_5g030860 25.532 564 351 28 97 612 66 608 6.32e-27 116
MS.gene044157.t1 MTR_1g087240 23.197 638 372 28 8 595 5 574 1.01e-23 106
MS.gene044157.t1 MTR_5g069850 58.333 48 20 0 554 601 4 51 3.28e-15 70.9
MS.gene044157.t1 MTR_3g079770 89.655 29 3 0 598 626 12 40 3.96e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044157.t1 AT5G20950 77.886 615 134 2 8 622 85 697 0.0 987
MS.gene044157.t1 AT5G20950 77.886 615 134 2 8 622 7 619 0.0 985
MS.gene044157.t1 AT5G20950 77.886 615 134 2 8 622 7 619 0.0 985
MS.gene044157.t1 AT5G04885 67.788 624 198 3 1 622 1 623 0.0 917
MS.gene044157.t1 AT5G04885 67.788 624 198 3 1 622 1 623 0.0 917
MS.gene044157.t1 AT5G04885 67.788 624 198 3 1 622 18 640 0.0 916
MS.gene044157.t1 AT5G20940 76.007 596 140 2 27 622 31 623 0.0 909
MS.gene044157.t1 AT3G47000 58.961 597 242 3 28 622 10 605 0.0 742
MS.gene044157.t1 AT3G47040 58.403 601 247 3 28 626 10 609 0.0 730
MS.gene044157.t1 AT3G47010 57.429 599 252 3 28 624 11 608 0.0 717
MS.gene044157.t1 AT3G62710 56.098 656 243 12 1 622 6 650 0.0 717
MS.gene044157.t1 AT3G47040 56.340 623 244 4 28 623 10 631 0.0 717
MS.gene044157.t1 AT3G47010 57.095 599 253 4 28 624 11 607 0.0 706
MS.gene044157.t1 AT3G47050 56.303 595 255 4 28 620 10 601 0.0 688
MS.gene044157.t1 AT3G47040 54.358 631 252 7 28 623 10 639 0.0 678
MS.gene044157.t1 AT3G47000 60.599 434 171 0 28 461 10 443 0.0 572
MS.gene044157.t1 AT3G47040 59.908 434 174 0 28 461 10 443 0.0 555
MS.gene044157.t1 AT3G47010 58.756 434 179 0 28 461 11 444 0.0 546
MS.gene044157.t1 AT3G47000 57.343 429 180 3 196 622 1 428 3.74e-176 507
MS.gene044157.t1 AT3G47010 54.756 431 191 4 196 624 1 429 1.81e-164 477
MS.gene044157.t1 AT3G47050 54.987 371 167 0 28 398 10 380 3.78e-149 436
MS.gene044157.t1 AT5G64570 24.924 654 379 26 4 605 16 609 3.43e-36 145
MS.gene044157.t1 AT5G09730 25.499 651 367 27 9 604 11 598 3.88e-35 142
MS.gene044157.t1 AT5G49360 25.698 681 378 31 4 621 12 627 1.72e-34 140
MS.gene044157.t1 AT1G02640 25.116 645 371 27 27 621 43 625 7.16e-34 138
MS.gene044157.t1 AT5G64570 24.451 638 372 25 4 591 16 593 2.97e-32 132
MS.gene044157.t1 AT5G10560 26.930 557 328 26 97 595 66 601 3.77e-32 133
MS.gene044157.t1 AT3G19620 25.909 660 376 31 16 621 27 627 3.26e-31 130
MS.gene044157.t1 AT5G64570 26.737 475 294 20 158 605 4 451 3.39e-30 126
MS.gene044157.t1 AT1G78060 26.368 603 342 27 33 595 43 583 4.06e-29 123

Find 155 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATGAGGTTTCAATATT+TGG 0.137122 3.4:-76164579 None:intergenic
CTTGGGATTCCAATGATTTA+TGG 0.138672 3.4:+76161159 MS.gene044157:CDS
CTTGTGGCTGCATGGCTTCC+TGG 0.170355 3.4:+76164392 MS.gene044157:CDS
GCATCGTCAATCCTGCTAAT+TGG 0.195190 3.4:-76163371 None:intergenic
AGGAAGTCATGCTGACAATT+TGG 0.215763 3.4:+76163696 MS.gene044157:CDS
AATGAACTCAGTAAAGTTAT+AGG 0.257235 3.4:-76163312 None:intergenic
CCTCTATTTCCATTTGGATT+TGG 0.273183 3.4:+76164539 MS.gene044157:CDS
TGCTGAGACTTGGGTGAAAA+TGG 0.299375 3.4:+76161101 MS.gene044157:CDS
TGTGTAGTTGTTCTCGTCAC+TGG 0.303470 3.4:+76164326 MS.gene044157:CDS
TTGGGATTCCAATGATTTAT+GGG 0.310059 3.4:+76161160 MS.gene044157:CDS
CTTTGAATTCACTGGCAAAC+TGG 0.319753 3.4:+76164454 MS.gene044157:CDS
AAGTACTTGGTCATGGCTTC+AGG 0.324560 3.4:-76160642 None:intergenic
TCAAGAACAAACTGCGGTTC+AGG 0.331109 3.4:+76162943 MS.gene044157:CDS
CTTCTATTCAATGGCACCTT+AGG 0.337123 3.4:-76160540 None:intergenic
TTCCCTCACAATGTTGGGCT+TGG 0.338471 3.4:+76161228 MS.gene044157:CDS
GCCTCAAAAGTCTTGGTTGC+AGG 0.340957 3.4:+76163676 MS.gene044157:CDS
GAGTAGATAAAGCTGCATTT+TGG 0.345290 3.4:-76161134 None:intergenic
TTGTAGACAACTTCAGTTGC+AGG 0.355816 3.4:-76164143 None:intergenic
TTTGATGAGTAGAATGACTT+TGG 0.365060 3.4:+76160572 MS.gene044157:CDS
AAACCTTATGCTGAAACATT+TGG 0.369639 3.4:+76164233 MS.gene044157:CDS
TCACCAAATGTTTCAGCATA+AGG 0.371613 3.4:-76164236 None:intergenic
CATCGTCAATCCTGCTAATT+GGG 0.372190 3.4:-76163370 None:intergenic
AACAAAAGGAGTTCCCTTCC+TGG 0.375958 3.4:-76161761 None:intergenic
TGTTTATCGCCAACATTCAT+TGG 0.380197 3.4:-76164509 None:intergenic
TATGATCCTCTATTTCCATT+TGG 0.381581 3.4:+76164533 MS.gene044157:CDS
GCAGCTTTATCTACTCCTCT+TGG 0.387602 3.4:+76161141 MS.gene044157:CDS
ATGAACTCAGTAAAGTTATA+GGG 0.395590 3.4:-76163311 None:intergenic
GGAAGTCATGCTGACAATTT+GGG 0.395920 3.4:+76163697 MS.gene044157:CDS
GAGATATTCCTGGCAATTCC+AGG 0.396979 3.4:+76161743 MS.gene044157:CDS
GCCCTTGAAGTTAGAGCTAC+TGG 0.404728 3.4:+76161499 MS.gene044157:CDS
TCTAAGTCTCGCAAACCAAT+TGG 0.406773 3.4:+76163454 MS.gene044157:CDS
TCTTTGATTCTTCTATTCAA+TGG 0.409302 3.4:-76160549 None:intergenic
CCAAATCCAAATGGAAATAG+AGG 0.410646 3.4:-76164539 None:intergenic
CAGCTTTATCTACTCCTCTT+GGG 0.415243 3.4:+76161142 MS.gene044157:CDS
GTTGAAGCTGGTGTCAGTGC+TGG 0.417130 3.4:+76163153 MS.gene044157:CDS
TTCCAGTAGCTCTAACTTCA+AGG 0.427669 3.4:-76161501 None:intergenic
GAAATTATACCTGGTCTTCA+AGG 0.428354 3.4:+76161721 MS.gene044157:CDS
GACTTGATAAAACTAGCATC+TGG 0.430500 3.4:-76164173 None:intergenic
ATTGTTCTCATTGATACCCT+TGG 0.433255 3.4:-76162772 None:intergenic
AATGTACCTTGCTACCCAAT+TGG 0.438570 3.4:-76163469 None:intergenic
TGTTCTTTACTTGAAAGGTT+AGG 0.439033 3.4:-76163340 None:intergenic
TATGGGATAGATGCTGTTCA+TGG 0.440549 3.4:+76161177 MS.gene044157:CDS
AATATTGTTCTTTACTTGAA+AGG 0.442284 3.4:-76163345 None:intergenic
TTCTTATGCCATAGTTATTG+TGG 0.447834 3.4:+76164205 MS.gene044157:CDS
ATTACTTGGCAGGGACTTAG+TGG 0.448542 3.4:+76163742 MS.gene044157:CDS
GCATCTATCCCATAAATCAT+TGG 0.452813 3.4:-76161168 None:intergenic
CAAGAACAAACTGCGGTTCA+GGG 0.456249 3.4:+76162944 MS.gene044157:CDS
TATGGTGACTTTGAATTCAC+TGG 0.461713 3.4:+76164446 MS.gene044157:CDS
AGGGAGTGTTCCAGCTGAAA+AGG 0.462443 3.4:+76161074 MS.gene044157:CDS
CATGAGGAGGAGAGGTAATC+CGG 0.462465 3.4:-76163113 None:intergenic
TGAGGTTTCAATATTTGGTA+AGG 0.463136 3.4:-76164574 None:intergenic
TGTTCTCGTCACTGGGCGTC+CGG 0.463651 3.4:+76164334 MS.gene044157:CDS
TGCTTCTTTACCGCAATACA+TGG 0.465680 3.4:-76161541 None:intergenic
ATACATGGAGCAAACACATA+TGG 0.466208 3.4:-76161526 None:intergenic
ATCTCCTACACTAGCTGGAA+TGG 0.467244 3.4:+76162879 MS.gene044157:CDS
TTCTTGGGAAGGGGAAGCAG+TGG 0.467812 3.4:-76163652 None:intergenic
GCATGGCTTCCTGGCACTGA+AGG 0.468764 3.4:+76164401 MS.gene044157:CDS
AAAAGGCATCTGCTGAGACT+TGG 0.471382 3.4:+76161091 MS.gene044157:CDS
ATACTATGACTCAATTATCA+AGG 0.471567 3.4:+76162839 MS.gene044157:CDS
ACACCTTGGCCTTCAGTGCC+AGG 0.472862 3.4:-76164410 None:intergenic
ATGGTGCTTGGACCTGGCTC+AGG 0.474607 3.4:-76164278 None:intergenic
GGTCTTCAAGGAGATATTCC+TGG 0.478810 3.4:+76161733 MS.gene044157:CDS
ACTTACTTTCCAGCAACAAA+AGG 0.480992 3.4:-76161775 None:intergenic
ACAATATTATCCCAATTAGC+AGG 0.481409 3.4:+76163360 MS.gene044157:CDS
GGTGTTACTGACGTTCTCTA+TGG 0.482539 3.4:+76164428 MS.gene044157:CDS
GAGCAGGGAGTGTGTTGAGT+GGG 0.484068 3.4:+76161049 MS.gene044157:intron
TGTCAGTGCTGGAATTGATA+TGG 0.484901 3.4:+76163164 MS.gene044157:CDS
TTGGTGATGGTGCTTGGACC+TGG 0.485332 3.4:-76164284 None:intergenic
AGCAGGGAGTGTGTTGAGTG+GGG 0.485367 3.4:+76161050 MS.gene044157:intron
GATGAGTAGAATGACTTTGG+AGG 0.485718 3.4:+76160575 MS.gene044157:CDS
CAAGAAAGCCTCAAAAGTCT+TGG 0.487758 3.4:+76163669 MS.gene044157:CDS
TCTTATGCCATAGTTATTGT+GGG 0.491158 3.4:+76164206 MS.gene044157:CDS
CGCCAACATTCATTGGAAGC+TGG 0.492042 3.4:-76164502 None:intergenic
GCCATGACCAAGTACTTCAT+TGG 0.492284 3.4:+76160648 MS.gene044157:CDS
CATACATTGGTGATGGTGCT+TGG 0.492523 3.4:-76164290 None:intergenic
TGGATGGACAATTACTTGGC+AGG 0.494957 3.4:+76163732 MS.gene044157:CDS
CTAAGTCTCGCAAACCAATT+GGG 0.503129 3.4:+76163455 MS.gene044157:CDS
AAATCTTCAATCCCTGTAGT+GGG 0.504070 3.4:+76160456 MS.gene044157:CDS
AGTGGTAGTGATCTTACAAC+GGG 0.506662 3.4:+76163760 MS.gene044157:CDS
TCCCTAGTGCTGCTAAAGAA+TGG 0.509354 3.4:+76163613 MS.gene044157:CDS
GTCAAATGACTCAGCTTGAA+AGG 0.511265 3.4:+76160607 MS.gene044157:CDS
TTATGATCTCCTACACTAGC+TGG 0.511540 3.4:+76162874 MS.gene044157:CDS
AGATATGGCTGAATCACAAC+CGG 0.512743 3.4:-76164353 None:intergenic
AAAGGCATCTGCTGAGACTT+GGG 0.515013 3.4:+76161092 MS.gene044157:CDS
GTTCCCTTCCTGGAATTGCC+AGG 0.515895 3.4:-76161751 None:intergenic
AGTTAGCAAGAGAAGCTGTT+CGG 0.516214 3.4:+76163587 MS.gene044157:CDS
GTGTAGTTGTTCTCGTCACT+GGG 0.517390 3.4:+76164327 MS.gene044157:CDS
GTAGTCAAACCAAATCCAAA+TGG 0.519838 3.4:-76164548 None:intergenic
ACCAATGAAGTACTTGGTCA+TGG 0.520535 3.4:-76160649 None:intergenic
TCTCCTACACTAGCTGGAAT+GGG 0.523580 3.4:+76162880 MS.gene044157:CDS
ACCATCTCCCACAAAATGCT+TGG 0.524715 3.4:-76162742 None:intergenic
TTTGAGGCTTTCTTGGGAAG+GGG 0.526484 3.4:-76163661 None:intergenic
ATGACTTTGGAGGAAAAGAT+AGG 0.531688 3.4:+76160585 MS.gene044157:CDS
TAGTTTACCAATGAAGTACT+TGG 0.536321 3.4:-76160655 None:intergenic
ATAATTGAGTCATAGTATGC+TGG 0.538845 3.4:-76162834 None:intergenic
GAAATCTTCAATCCCTGTAG+TGG 0.541084 3.4:+76160455 MS.gene044157:CDS
TAGAAAGTATAAAGATCCTA+AGG 0.541881 3.4:+76160524 MS.gene044157:CDS
CGCAAACCAATTGGGTAGCA+AGG 0.549958 3.4:+76163463 MS.gene044157:CDS
CAGATTGGCAGGGTATTGAC+CGG 0.554348 3.4:+76163094 MS.gene044157:CDS
CTTAAGAGTAAAATTTACCA+TGG 0.558634 3.4:+76163406 MS.gene044157:CDS
TATTCATACTCTGTTGAAGC+TGG 0.559362 3.4:+76163141 MS.gene044157:CDS
AGCACCATCACCAATGTATG+TGG 0.560509 3.4:+76164293 MS.gene044157:CDS
GCAGGGAGTGTGTTGAGTGG+GGG 0.562901 3.4:+76161051 MS.gene044157:intron
TGAGCAGGGAGTGTGTTGAG+TGG 0.563237 3.4:+76161048 MS.gene044157:intron
ACCATTCTTTAGCAGCACTA+GGG 0.563428 3.4:-76163614 None:intergenic
TTGAATTGAGCCACATACAT+TGG 0.565279 3.4:-76164303 None:intergenic
ATGTTGGGCTTGGAGTTACC+AGG 0.568992 3.4:+76161238 MS.gene044157:CDS
GCTAACCGTGATCTTGTCAC+TGG 0.569380 3.4:+76162915 MS.gene044157:CDS
AATCTAACAATACCTGAGCC+AGG 0.570894 3.4:+76164266 MS.gene044157:CDS
TATGAATAGTTAGCATGAGG+AGG 0.570907 3.4:-76163126 None:intergenic
TCATAGCAACGTCCCCACCT+TGG 0.571419 3.4:-76161658 None:intergenic
ATAAACTACAAAGGACTGCT+CGG 0.571658 3.4:+76162801 MS.gene044157:CDS
AATTCACTGGCAAACTGGCA+AGG 0.573063 3.4:+76164459 MS.gene044157:CDS
GGAGATGGTGGCACAACCAA+GGG 0.574513 3.4:+76162756 MS.gene044157:CDS
TACCATTCTTTAGCAGCACT+AGG 0.575010 3.4:-76163615 None:intergenic
TTTCCCATTCCAGCTAGTGT+AGG 0.575849 3.4:-76162883 None:intergenic
TTGATGCACTTGTGGCTGCA+TGG 0.576226 3.4:+76164384 MS.gene044157:CDS
CTGGCAAACTGGCAAGGACA+TGG 0.581102 3.4:+76164465 MS.gene044157:CDS
GACCAGCTTCCAATGAATGT+TGG 0.581266 3.4:+76164500 MS.gene044157:CDS
GGAATATCTCCTTGAAGACC+AGG 0.584165 3.4:-76161730 None:intergenic
CTTCCTGGCACTGAAGGCCA+AGG 0.585582 3.4:+76164407 MS.gene044157:CDS
ATAGTTAGCATGAGGAGGAG+AGG 0.585602 3.4:-76163121 None:intergenic
TTAAGAGTAAAATTTACCAT+GGG 0.589009 3.4:+76163407 MS.gene044157:CDS
ACTCCAAGCCCAACATTGTG+AGG 0.594912 3.4:-76161231 None:intergenic
ATCTTCAATCCCTGTAGTGG+GGG 0.596502 3.4:+76160458 MS.gene044157:CDS
TCCAGTAGCTCTAACTTCAA+GGG 0.597132 3.4:-76161500 None:intergenic
GTGGTGGATGGACAATTACT+TGG 0.597728 3.4:+76163728 MS.gene044157:CDS
TATTCCTGGCAATTCCAGGA+AGG 0.608444 3.4:+76161747 MS.gene044157:CDS
TGGGTAATCAATGTGGTGGA+TGG 0.609548 3.4:+76163716 MS.gene044157:CDS
GGATGGACAATTACTTGGCA+GGG 0.610729 3.4:+76163733 MS.gene044157:CDS
GGGAGATGGTGGCACAACCA+AGG 0.610937 3.4:+76162755 MS.gene044157:CDS
ACTATGACTGAAATTATACC+TGG 0.611152 3.4:+76161712 MS.gene044157:CDS
ATTACTTTGACCCAGGAACA+AGG 0.611384 3.4:+76162707 MS.gene044157:intron
CACAGGTCTGCAGAGATCCA+AGG 0.612507 3.4:+76161641 MS.gene044157:intron
TACTATGACTCAATTATCAA+GGG 0.614551 3.4:+76162840 MS.gene044157:CDS
GTCTGCAGAGATCCAAGGTG+GGG 0.623803 3.4:+76161646 MS.gene044157:CDS
ATTCCTGGCAATTCCAGGAA+GGG 0.629290 3.4:+76161748 MS.gene044157:CDS
GAGTATGAATAGTTAGCATG+AGG 0.632304 3.4:-76163129 None:intergenic
CTCCAAGCCCAACATTGTGA+GGG 0.633682 3.4:-76161230 None:intergenic
AATCTTCAATCCCTGTAGTG+GGG 0.637064 3.4:+76160457 MS.gene044157:CDS
TAGCAGGATTGACGATGCTG+TGG 0.639920 3.4:+76163376 MS.gene044157:CDS
AATACTGTGATAAACTACAA+AGG 0.649484 3.4:+76162792 MS.gene044157:CDS
TGAGCCACATACATTGGTGA+TGG 0.655207 3.4:-76164297 None:intergenic
GGTCTGCAGAGATCCAAGGT+GGG 0.656347 3.4:+76161645 MS.gene044157:intron
AGAGAACGTCAGTAACACCT+TGG 0.656582 3.4:-76164424 None:intergenic
GATAACCAGTGACAAGATCA+CGG 0.663157 3.4:-76162920 None:intergenic
AGGTCTGCAGAGATCCAAGG+TGG 0.666220 3.4:+76161644 MS.gene044157:intron
AATTTGGGTAATCAATGTGG+TGG 0.666365 3.4:+76163712 MS.gene044157:CDS
GCGAGACTTAGATCAGCGAG+TGG 0.666997 3.4:-76163443 None:intergenic
TAAATCATTGGAATCCCAAG+AGG 0.673274 3.4:-76161156 None:intergenic
TAGTGGTAGTGATCTTACAA+CGG 0.680346 3.4:+76163759 MS.gene044157:CDS
TTTGTCATATCAGATTGGCA+GGG 0.682521 3.4:+76163084 MS.gene044157:CDS
GACAATTTGGGTAATCAATG+TGG 0.683166 3.4:+76163709 MS.gene044157:CDS
TGTGTTTGCTCCATGTATTG+CGG 0.724417 3.4:+76161531 MS.gene044157:CDS
GTTATCTCAAGAACAAACTG+CGG 0.748132 3.4:+76162937 MS.gene044157:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAAGTTGAATTATATATT+AGG + chr3.4:76162400-76162419 MS.gene044157:intron 15.0%
!! TCTATATAACAAATAGTATT+CGG + chr3.4:76163912-76163931 MS.gene044157:intron 15.0%
!!! AGTTTTTATATATTACAGTT+AGG + chr3.4:76163872-76163891 MS.gene044157:intron 15.0%
!! AATATTGTTCTTTACTTGAA+AGG - chr3.4:76163348-76163367 None:intergenic 20.0%
!! AATGAAATCTACTGTTTATT+AGG + chr3.4:76161440-76161459 MS.gene044157:intron 20.0%
!! AGAAAAAGAAATAGAAAAGA+TGG + chr3.4:76162206-76162225 MS.gene044157:intron 20.0%
!! ATGAAATCTACTGTTTATTA+GGG + chr3.4:76161441-76161460 MS.gene044157:intron 20.0%
!! GAAAATATGTTTGTTTAATG+CGG + chr3.4:76162074-76162093 MS.gene044157:intron 20.0%
!! GTCAAAGTAATAAAAATGAA+GGG - chr3.4:76162698-76162717 None:intergenic 20.0%
!! GTTAAATAAATAGCACATTA+AGG + chr3.4:76162493-76162512 MS.gene044157:intron 20.0%
!! TAGATTTGTGTTTATTGAAA+AGG - chr3.4:76161389-76161408 None:intergenic 20.0%
!! TTAAGAGTAAAATTTACCAT+GGG + chr3.4:76163407-76163426 MS.gene044157:CDS 20.0%
!! TTTCATTCACCAAAATAAAA+GGG + chr3.4:76162180-76162199 MS.gene044157:intron 20.0%
!!! GTTTTTTCAAATCATTTGAA+TGG + chr3.4:76162288-76162307 MS.gene044157:intron 20.0%
!!! TTTTCATTCACCAAAATAAA+AGG + chr3.4:76162179-76162198 MS.gene044157:intron 20.0%
! AAAAGAAATAGAAAAGATGG+TGG + chr3.4:76162209-76162228 MS.gene044157:intron 25.0%
! AACTACATATCATGTAAGAA+AGG + chr3.4:76163009-76163028 MS.gene044157:intron 25.0%
! AAGAAATCATAGAATCATCT+TGG - chr3.4:76163953-76163972 None:intergenic 25.0%
! AATACTGTGATAAACTACAA+AGG + chr3.4:76162792-76162811 MS.gene044157:CDS 25.0%
! AATGAACTCAGTAAAGTTAT+AGG - chr3.4:76163315-76163334 None:intergenic 25.0%
! ACCATAAAAAAGAAGCTTAT+GGG - chr3.4:76162236-76162255 None:intergenic 25.0%
! ATACTATGACTCAATTATCA+AGG + chr3.4:76162839-76162858 MS.gene044157:CDS 25.0%
! ATGAACTCAGTAAAGTTATA+GGG - chr3.4:76163314-76163333 None:intergenic 25.0%
! CTTAAGAGTAAAATTTACCA+TGG + chr3.4:76163406-76163425 MS.gene044157:CDS 25.0%
! GGTCAAAGTAATAAAAATGA+AGG - chr3.4:76162699-76162718 None:intergenic 25.0%
! GGTCATATTTACATTATAGA+TGG - chr3.4:76162349-76162368 None:intergenic 25.0%
! TACTATGACTCAATTATCAA+GGG + chr3.4:76162840-76162859 MS.gene044157:CDS 25.0%
! TCTTTGATTCTTCTATTCAA+TGG - chr3.4:76160552-76160571 None:intergenic 25.0%
! TGATGATAGATTTGTGTAAA+GGG + chr3.4:76160754-76160773 MS.gene044157:intron 25.0%
! TTCAAATCATTTGAATGGTT+GGG + chr3.4:76162293-76162312 MS.gene044157:intron 25.0%
! TTTCAAATCATTTGAATGGT+TGG + chr3.4:76162292-76162311 MS.gene044157:intron 25.0%
!! AATTTTTCTTCCATCTTGTA+GGG + chr3.4:76163060-76163079 MS.gene044157:intron 25.0%
!! AGATAAAGTTTATGTTTTCC+TGG + chr3.4:76162154-76162173 MS.gene044157:intron 25.0%
!! CATATTTGATAACTTGTAAC+TGG + chr3.4:76161339-76161358 MS.gene044157:intron 25.0%
!! GCATCAATTTTTGATAGATA+TGG - chr3.4:76164371-76164390 None:intergenic 25.0%
!! GTTTTACAATTTCCCATAAA+AGG - chr3.4:76164057-76164076 None:intergenic 25.0%
!! TAATTTTTCTTCCATCTTGT+AGG + chr3.4:76163059-76163078 MS.gene044157:intron 25.0%
!! TACCATATTTTGCATTCAAA+TGG + chr3.4:76162318-76162337 MS.gene044157:intron 25.0%
!! TAGAAAGTATAAAGATCCTA+AGG + chr3.4:76160524-76160543 MS.gene044157:CDS 25.0%
!! TCTTCTTTTCAATCATTTCA+TGG - chr3.4:76161295-76161314 None:intergenic 25.0%
!!! GTCATAGTTTTAACAATCTT+AGG - chr3.4:76161700-76161719 None:intergenic 25.0%
!!! TAAGATTATTTTTTCCTGAC+AGG + chr3.4:76164083-76164102 MS.gene044157:intron 25.0%
!!! TCATAAGTTTTATATCAGTG+TGG + chr3.4:76162029-76162048 MS.gene044157:intron 25.0%
!!! TTTATTGTTTTGCTGTAATG+AGG + chr3.4:76160995-76161014 MS.gene044157:intron 25.0%
!!! TTTTCTTCTCCCTTTTATTT+TGG - chr3.4:76162192-76162211 None:intergenic 25.0%
AAACCTTATGCTGAAACATT+TGG + chr3.4:76164233-76164252 MS.gene044157:CDS 30.0%
ACAATATTATCCCAATTAGC+AGG + chr3.4:76163360-76163379 MS.gene044157:CDS 30.0%
ACTATGACTGAAATTATACC+TGG + chr3.4:76161712-76161731 MS.gene044157:CDS 30.0%
AGCCATTTGAATGCAAAATA+TGG - chr3.4:76162323-76162342 None:intergenic 30.0%
ATAATTGAGTCATAGTATGC+TGG - chr3.4:76162837-76162856 None:intergenic 30.0%
ATCAAAAATTGATGCACTTG+TGG + chr3.4:76164376-76164395 MS.gene044157:CDS 30.0%
ATCAATACAATGCTATTACC+AGG - chr3.4:76161963-76161982 None:intergenic 30.0%
CCAGTGCTAATAAAAAAGAT+TGG + chr3.4:76161466-76161485 MS.gene044157:CDS 30.0%
GACCATAAAAAAGAAGCTTA+TGG - chr3.4:76162237-76162256 None:intergenic 30.0%
GTGATGATAGATTTGTGTAA+AGG + chr3.4:76160753-76160772 MS.gene044157:intron 30.0%
TAAAACTTATGACCAGAAAC+AGG - chr3.4:76162021-76162040 None:intergenic 30.0%
TATGATCCTCTATTTCCATT+TGG + chr3.4:76164533-76164552 MS.gene044157:CDS 30.0%
TCTTATGCCATAGTTATTGT+GGG + chr3.4:76164206-76164225 MS.gene044157:CDS 30.0%
TGTTCTTTACTTGAAAGGTT+AGG - chr3.4:76163343-76163362 None:intergenic 30.0%
TTACCAGGAAACTTTAGTTA+TGG - chr3.4:76161948-76161967 None:intergenic 30.0%
TTCACATTGTTTGCAGATTA+TGG + chr3.4:76163286-76163305 MS.gene044157:intron 30.0%
TTCTTATGCCATAGTTATTG+TGG + chr3.4:76164205-76164224 MS.gene044157:CDS 30.0%
TTGAAAAAACCCATATGTGT+GGG - chr3.4:76162278-76162297 None:intergenic 30.0%
TTGGGATTCCAATGATTTAT+GGG + chr3.4:76161160-76161179 MS.gene044157:CDS 30.0%
TTTGAAAAAACCCATATGTG+TGG - chr3.4:76162279-76162298 None:intergenic 30.0%
TTTGATGAGTAGAATGACTT+TGG + chr3.4:76160572-76160591 MS.gene044157:CDS 30.0%
! AATTATTATCAGTGTCGTTG+AGG + chr3.4:76160920-76160939 MS.gene044157:intron 30.0%
! ACCAAGACTTTTTGTGTAAT+TGG - chr3.4:76162429-76162448 None:intergenic 30.0%
! ATATTTTGCATTCAAATGGC+TGG + chr3.4:76162322-76162341 MS.gene044157:intron 30.0%
! CATTTTTATTACTTTGACCC+AGG + chr3.4:76162700-76162719 MS.gene044157:intron 30.0%
! CCAAGACTTTTTGTGTAATT+GGG - chr3.4:76162428-76162447 None:intergenic 30.0%
! TAGTTTACCAATGAAGTACT+TGG - chr3.4:76160658-76160677 None:intergenic 30.0%
! TTTCCATAGCATCCTTTTAT+GGG + chr3.4:76164042-76164061 MS.gene044157:intron 30.0%
! TTTTTCTCCCACAATAACTA+TGG - chr3.4:76164216-76164235 None:intergenic 30.0%
!! TTGTTTTATAGCATCAAGGA+TGG - chr3.4:76164114-76164133 None:intergenic 30.0%
!!! ACCCATAAGCTTCTTTTTTA+TGG + chr3.4:76162232-76162251 MS.gene044157:intron 30.0%
!!! CAAGTTTGCTGATATTTTGA+TGG + chr3.4:76161606-76161625 MS.gene044157:intron 30.0%
!!! CCAATCTTTTTTATTAGCAC+TGG - chr3.4:76161469-76161488 None:intergenic 30.0%
!!! CTGTTTGTTTTATAGCATCA+AGG - chr3.4:76164118-76164137 None:intergenic 30.0%
AAATCTTCAATCCCTGTAGT+GGG + chr3.4:76160456-76160475 MS.gene044157:CDS 35.0%
AATTTGGGTAATCAATGTGG+TGG + chr3.4:76163712-76163731 MS.gene044157:CDS 35.0%
ACTTACTTTCCAGCAACAAA+AGG - chr3.4:76161778-76161797 None:intergenic 35.0%
AGGCAAGTTTATGTATATGC+AGG + chr3.4:76161258-76161277 MS.gene044157:intron 35.0%
ATAAACTACAAAGGACTGCT+CGG + chr3.4:76162801-76162820 MS.gene044157:CDS 35.0%
ATAATTGATGCTCCGATTGA+TGG - chr3.4:76162127-76162146 None:intergenic 35.0%
ATACATGGAGCAAACACATA+TGG - chr3.4:76161529-76161548 None:intergenic 35.0%
ATTGTTCTCATTGATACCCT+TGG - chr3.4:76162775-76162794 None:intergenic 35.0%
CATCCATAACTAAAGTTTCC+TGG + chr3.4:76161942-76161961 MS.gene044157:intron 35.0%
CATCTTACCAGTTGTGTTTA+CGG - chr3.4:76163985-76164004 None:intergenic 35.0%
CCAAATCCAAATGGAAATAG+AGG - chr3.4:76164542-76164561 None:intergenic 35.0%
CCCAATTACACAAAAAGTCT+TGG + chr3.4:76162425-76162444 MS.gene044157:intron 35.0%
CCTCTATTTCCATTTGGATT+TGG + chr3.4:76164539-76164558 MS.gene044157:CDS 35.0%
CTTGGGATTCCAATGATTTA+TGG + chr3.4:76161159-76161178 MS.gene044157:CDS 35.0%
GACAATTTGGGTAATCAATG+TGG + chr3.4:76163709-76163728 MS.gene044157:CDS 35.0%
GACTTGATAAAACTAGCATC+TGG - chr3.4:76164176-76164195 None:intergenic 35.0%
GAGTATGAATAGTTAGCATG+AGG - chr3.4:76163132-76163151 None:intergenic 35.0%
GCATCTATCCCATAAATCAT+TGG - chr3.4:76161171-76161190 None:intergenic 35.0%
GTAGTCAAACCAAATCCAAA+TGG - chr3.4:76164551-76164570 None:intergenic 35.0%
GTTATCTCAAGAACAAACTG+CGG + chr3.4:76162937-76162956 MS.gene044157:CDS 35.0%
TAAATCATTGGAATCCCAAG+AGG - chr3.4:76161159-76161178 None:intergenic 35.0%
TAATTGATGCTCCGATTGAT+GGG - chr3.4:76162126-76162145 None:intergenic 35.0%
TATGAATAGTTAGCATGAGG+AGG - chr3.4:76163129-76163148 None:intergenic 35.0%
TATGACAAAACCCTACAAGA+TGG - chr3.4:76163073-76163092 None:intergenic 35.0%
TATTCATACTCTGTTGAAGC+TGG + chr3.4:76163141-76163160 MS.gene044157:CDS 35.0%
TCACCAAATGTTTCAGCATA+AGG - chr3.4:76164239-76164258 None:intergenic 35.0%
TCGCATATCATGTCTTAAAC+AGG + chr3.4:76163555-76163574 MS.gene044157:intron 35.0%
TCTAACAGACATTCTAAGTG+CGG - chr3.4:76163845-76163864 None:intergenic 35.0%
TGCATATACATAAACTTGCC+TGG - chr3.4:76161259-76161278 None:intergenic 35.0%
TGTTTATCGCCAACATTCAT+TGG - chr3.4:76164512-76164531 None:intergenic 35.0%
TTGAATTGAGCCACATACAT+TGG - chr3.4:76164306-76164325 None:intergenic 35.0%
TTTCCCATAAAAGGATGCTA+TGG - chr3.4:76164048-76164067 None:intergenic 35.0%
TTTGTCATATCAGATTGGCA+GGG + chr3.4:76163084-76163103 MS.gene044157:CDS 35.0%
! AAGTCTTGTAGTTGTATGGT+TGG + chr3.4:76161840-76161859 MS.gene044157:intron 35.0%
! ACTATTTTCCCTCACAATGT+TGG + chr3.4:76161222-76161241 MS.gene044157:CDS 35.0%
! ATGACTTTGGAGGAAAAGAT+AGG + chr3.4:76160585-76160604 MS.gene044157:CDS 35.0%
! CTATTTTCCCTCACAATGTT+GGG + chr3.4:76161223-76161242 MS.gene044157:CDS 35.0%
! CTTTCCATAGCATCCTTTTA+TGG + chr3.4:76164041-76164060 MS.gene044157:intron 35.0%
! GAAATTATACCTGGTCTTCA+AGG + chr3.4:76161721-76161740 MS.gene044157:CDS 35.0%
! GAGTAGATAAAGCTGCATTT+TGG - chr3.4:76161137-76161156 None:intergenic 35.0%
! GCTGTAATGAGGTGATTTTA+TGG + chr3.4:76161006-76161025 MS.gene044157:intron 35.0%
! TAGTGGTAGTGATCTTACAA+CGG + chr3.4:76163759-76163778 MS.gene044157:CDS 35.0%
! TCACAAGTCTTGTAGTTGTA+TGG + chr3.4:76161836-76161855 MS.gene044157:intron 35.0%
! TTTTGGTGAATGAAAAAGCC+AGG - chr3.4:76162175-76162194 None:intergenic 35.0%
! TTTTGTCATATCAGATTGGC+AGG + chr3.4:76163083-76163102 MS.gene044157:CDS 35.0%
!! AGGGTTTTGTCATATCAGAT+TGG + chr3.4:76163079-76163098 MS.gene044157:intron 35.0%
!!! AAGACTTTTGAGGCTTTCTT+GGG - chr3.4:76163670-76163689 None:intergenic 35.0%
!!! GGTTGGTGATTTTCTATGAA+GGG + chr3.4:76161857-76161876 MS.gene044157:intron 35.0%
!!! TGGTTGGTGATTTTCTATGA+AGG + chr3.4:76161856-76161875 MS.gene044157:intron 35.0%
!!! TGTTTTGTTTTGCCTGTTTC+TGG + chr3.4:76162006-76162025 MS.gene044157:intron 35.0%
AATCTAACAATACCTGAGCC+AGG + chr3.4:76164266-76164285 MS.gene044157:CDS 40.0%
AATCTTCAATCCCTGTAGTG+GGG + chr3.4:76160457-76160476 MS.gene044157:CDS 40.0%
AATGTACCTTGCTACCCAAT+TGG - chr3.4:76163472-76163491 None:intergenic 40.0%
AATTGATGCTCCGATTGATG+GGG - chr3.4:76162125-76162144 None:intergenic 40.0%
ACCACACACATTGTAAGTGT+CGG - chr3.4:76160840-76160859 None:intergenic 40.0%
ACCATTCTTTAGCAGCACTA+GGG - chr3.4:76163617-76163636 None:intergenic 40.0%
AGATATGGCTGAATCACAAC+CGG - chr3.4:76164356-76164375 None:intergenic 40.0%
AGGAAGTCATGCTGACAATT+TGG + chr3.4:76163696-76163715 MS.gene044157:CDS 40.0%
AGTTAGCAAGAGAAGCTGTT+CGG + chr3.4:76163587-76163606 MS.gene044157:CDS 40.0%
ATTACTTTGACCCAGGAACA+AGG + chr3.4:76162707-76162726 MS.gene044157:intron 40.0%
CAAGAAAGCCTCAAAAGTCT+TGG + chr3.4:76163669-76163688 MS.gene044157:CDS 40.0%
CACTTCAGATCAAATGTGTG+TGG + chr3.4:76160802-76160821 MS.gene044157:intron 40.0%
CATCGTCAATCCTGCTAATT+GGG - chr3.4:76163373-76163392 None:intergenic 40.0%
CTAAGTCTCGCAAACCAATT+GGG + chr3.4:76163455-76163474 MS.gene044157:CDS 40.0%
CTTCTATTCAATGGCACCTT+AGG - chr3.4:76160543-76160562 None:intergenic 40.0%
CTTTGAATTCACTGGCAAAC+TGG + chr3.4:76164454-76164473 MS.gene044157:CDS 40.0%
GAAATCTTCAATCCCTGTAG+TGG + chr3.4:76160455-76160474 MS.gene044157:CDS 40.0%
GATAACCAGTGACAAGATCA+CGG - chr3.4:76162923-76162942 None:intergenic 40.0%
GATGAGTAGAATGACTTTGG+AGG + chr3.4:76160575-76160594 MS.gene044157:CDS 40.0%
GATGGACCATTCATTAACAC+AGG + chr3.4:76161624-76161643 MS.gene044157:intron 40.0%
GCATTCAGCACATGTTCAAA+TGG - chr3.4:76163507-76163526 None:intergenic 40.0%
GGAAGTCATGCTGACAATTT+GGG + chr3.4:76163697-76163716 MS.gene044157:CDS 40.0%
GTCAAATGACTCAGCTTGAA+AGG + chr3.4:76160607-76160626 MS.gene044157:CDS 40.0%
TACCATTCTTTAGCAGCACT+AGG - chr3.4:76163618-76163637 None:intergenic 40.0%
TATGATGGTCCCACACATAT+GGG + chr3.4:76162266-76162285 MS.gene044157:intron 40.0%
TATGGGATAGATGCTGTTCA+TGG + chr3.4:76161177-76161196 MS.gene044157:CDS 40.0%
TATGTGTGGGACCATCATAA+CGG - chr3.4:76162265-76162284 None:intergenic 40.0%
TCTAAGTCTCGCAAACCAAT+TGG + chr3.4:76163454-76163473 MS.gene044157:CDS 40.0%
TGCAGACCTGTGTTAATGAA+TGG - chr3.4:76161633-76161652 None:intergenic 40.0%
TGCTTCTTTACCGCAATACA+TGG - chr3.4:76161544-76161563 None:intergenic 40.0%
TGTCAGTGTCTAGTAAGTGT+CGG - chr3.4:76160874-76160893 None:intergenic 40.0%
TGTGTTTGCTCCATGTATTG+CGG + chr3.4:76161531-76161550 MS.gene044157:CDS 40.0%
TTATGATCTCCTACACTAGC+TGG + chr3.4:76162874-76162893 MS.gene044157:CDS 40.0%
TTATGATGGTCCCACACATA+TGG + chr3.4:76162265-76162284 MS.gene044157:intron 40.0%
TTCAGATCAAATGTGTGTGG+TGG + chr3.4:76160805-76160824 MS.gene044157:intron 40.0%
TTGTAGACAACTTCAGTTGC+AGG - chr3.4:76164146-76164165 None:intergenic 40.0%
! ACCAATGAAGTACTTGGTCA+TGG - chr3.4:76160652-76160671 None:intergenic 40.0%
! AGTGGTAGTGATCTTACAAC+GGG + chr3.4:76163760-76163779 MS.gene044157:CDS 40.0%
! CAGCTTTATCTACTCCTCTT+GGG + chr3.4:76161142-76161161 MS.gene044157:CDS 40.0%
! TGACTTGTCATTGATGAGCA+GGG + chr3.4:76161034-76161053 MS.gene044157:intron 40.0%
! TGGATTTTCAAAAAGGCCCA+TGG - chr3.4:76163426-76163445 None:intergenic 40.0%
! TGTCAGTGCTGGAATTGATA+TGG + chr3.4:76163164-76163183 MS.gene044157:CDS 40.0%
!! CAGCGAGTGGATTTTCAAAA+AGG - chr3.4:76163433-76163452 None:intergenic 40.0%
!! TCCAGTAGCTCTAACTTCAA+GGG - chr3.4:76161503-76161522 None:intergenic 40.0%
!! TTCCAGTAGCTCTAACTTCA+AGG - chr3.4:76161504-76161523 None:intergenic 40.0%
!!! CAAGACTTTTGAGGCTTTCT+TGG - chr3.4:76163671-76163690 None:intergenic 40.0%
!!! TTTTGAGGCTTTCTTGGGAA+GGG - chr3.4:76163665-76163684 None:intergenic 40.0%
AACAAAAGGAGTTCCCTTCC+TGG - chr3.4:76161764-76161783 None:intergenic 45.0%
AAGTACTTGGTCATGGCTTC+AGG - chr3.4:76160645-76160664 None:intergenic 45.0%
AATTCACTGGCAAACTGGCA+AGG + chr3.4:76164459-76164478 MS.gene044157:CDS 45.0%
ACATGAGTTCCCCCATCAAT+CGG + chr3.4:76162112-76162131 MS.gene044157:intron 45.0%
ACCATCTCCCACAAAATGCT+TGG - chr3.4:76162745-76162764 None:intergenic 45.0%
AGAGAACGTCAGTAACACCT+TGG - chr3.4:76164427-76164446 None:intergenic 45.0%
AGCACCATCACCAATGTATG+TGG + chr3.4:76164293-76164312 MS.gene044157:CDS 45.0%
ATAGTTAGCATGAGGAGGAG+AGG - chr3.4:76163124-76163143 None:intergenic 45.0%
ATCTCCTACACTAGCTGGAA+TGG + chr3.4:76162879-76162898 MS.gene044157:CDS 45.0%
ATCTTCAATCCCTGTAGTGG+GGG + chr3.4:76160458-76160477 MS.gene044157:CDS 45.0%
ATGGTCCTATGCCGTTATGA+TGG + chr3.4:76162251-76162270 MS.gene044157:intron 45.0%
ATTACTTGGCAGGGACTTAG+TGG + chr3.4:76163742-76163761 MS.gene044157:CDS 45.0%
ATTCCTGGCAATTCCAGGAA+GGG + chr3.4:76161748-76161767 MS.gene044157:CDS 45.0%
ATTGATGCTCCGATTGATGG+GGG - chr3.4:76162124-76162143 None:intergenic 45.0%
CAAGAACAAACTGCGGTTCA+GGG + chr3.4:76162944-76162963 MS.gene044157:CDS 45.0%
CACTTGTTCAGCTTTCATCG+GGG + chr3.4:76162052-76162071 MS.gene044157:intron 45.0%
CTTTGTGTGTGTTGTGTGCA+TGG - chr3.4:76162370-76162389 None:intergenic 45.0%
GACACTTACAATGTGTGTGG+TGG + chr3.4:76160839-76160858 MS.gene044157:intron 45.0%
GACCAGCTTCCAATGAATGT+TGG + chr3.4:76164500-76164519 MS.gene044157:CDS 45.0%
GAGATATTCCTGGCAATTCC+AGG + chr3.4:76161743-76161762 MS.gene044157:CDS 45.0%
GCACTTGTTCAGCTTTCATC+GGG + chr3.4:76162051-76162070 MS.gene044157:intron 45.0%
GCATCGTCAATCCTGCTAAT+TGG - chr3.4:76163374-76163393 None:intergenic 45.0%
GCCATGACCAAGTACTTCAT+TGG + chr3.4:76160648-76160667 MS.gene044157:CDS 45.0%
GGAATATCTCCTTGAAGACC+AGG - chr3.4:76161733-76161752 None:intergenic 45.0%
GGATGGACAATTACTTGGCA+GGG + chr3.4:76163733-76163752 MS.gene044157:CDS 45.0%
GGCACTTGTTCAGCTTTCAT+CGG + chr3.4:76162050-76162069 MS.gene044157:intron 45.0%
GGTCTTCAAGGAGATATTCC+TGG + chr3.4:76161733-76161752 MS.gene044157:CDS 45.0%
GTGTAGTTGTTCTCGTCACT+GGG + chr3.4:76164327-76164346 MS.gene044157:CDS 45.0%
TACCAGTTGTGTTTACGGAC+AGG - chr3.4:76163980-76163999 None:intergenic 45.0%
TATTCCTGGCAATTCCAGGA+AGG + chr3.4:76161747-76161766 MS.gene044157:CDS 45.0%
TCAAGAACAAACTGCGGTTC+AGG + chr3.4:76162943-76162962 MS.gene044157:CDS 45.0%
TCCGACACTTACAATGTGTG+TGG + chr3.4:76160836-76160855 MS.gene044157:intron 45.0%
TCTCCTACACTAGCTGGAAT+GGG + chr3.4:76162880-76162899 MS.gene044157:CDS 45.0%
TGAGCCACATACATTGGTGA+TGG - chr3.4:76164300-76164319 None:intergenic 45.0%
TGCTGAGACTTGGGTGAAAA+TGG + chr3.4:76161101-76161120 MS.gene044157:CDS 45.0%
TGGATGGACAATTACTTGGC+AGG + chr3.4:76163732-76163751 MS.gene044157:CDS 45.0%
TGTGTAGTTGTTCTCGTCAC+TGG + chr3.4:76164326-76164345 MS.gene044157:CDS 45.0%
TTCCTGTCCGTAAACACAAC+TGG + chr3.4:76163975-76163994 MS.gene044157:intron 45.0%
TTTCCCATTCCAGCTAGTGT+AGG - chr3.4:76162886-76162905 None:intergenic 45.0%
! AAGCATTTTGTGGGAGATGG+TGG + chr3.4:76162744-76162763 MS.gene044157:CDS 45.0%
! AAGGGAACTCCTTTTGTTGC+TGG + chr3.4:76161766-76161785 MS.gene044157:CDS 45.0%
! AGCTTGTGCCAAGCATTTTG+TGG + chr3.4:76162734-76162753 MS.gene044157:CDS 45.0%
! GCAGCTTTATCTACTCCTCT+TGG + chr3.4:76161141-76161160 MS.gene044157:CDS 45.0%
! GCTTGTGCCAAGCATTTTGT+GGG + chr3.4:76162735-76162754 MS.gene044157:CDS 45.0%
! GGTTCTGCTTCTGTGCTTTT+TGG + chr3.4:76160479-76160498 MS.gene044157:CDS 45.0%
! GTGACTTGTCATTGATGAGC+AGG + chr3.4:76161033-76161052 MS.gene044157:intron 45.0%
! TACAATGTGTGTGGTGGTGT+CGG + chr3.4:76160845-76160864 MS.gene044157:intron 45.0%
! TCAAATGTGTGTGGTGGTGT+CGG + chr3.4:76160811-76160830 MS.gene044157:intron 45.0%
! TCCCTAGTGCTGCTAAAGAA+TGG + chr3.4:76163613-76163632 MS.gene044157:CDS 45.0%
! TCCTGCAACCAAGACTTTTG+AGG - chr3.4:76163680-76163699 None:intergenic 45.0%
! TGGGTAATCAATGTGGTGGA+TGG + chr3.4:76163716-76163735 MS.gene044157:CDS 45.0%
! TTTGAGGCTTTCTTGGGAAG+GGG - chr3.4:76163664-76163683 None:intergenic 45.0%
!! AAAAGGCATCTGCTGAGACT+TGG + chr3.4:76161091-76161110 MS.gene044157:CDS 45.0%
!! AAAGGCATCTGCTGAGACTT+GGG + chr3.4:76161092-76161111 MS.gene044157:CDS 45.0%
!! CATACATTGGTGATGGTGCT+TGG - chr3.4:76164293-76164312 None:intergenic 45.0%
!! GTGGTGGATGGACAATTACT+TGG + chr3.4:76163728-76163747 MS.gene044157:CDS 45.0%
!!! CTTTTGAGGCTTTCTTGGGA+AGG - chr3.4:76163666-76163685 None:intergenic 45.0%
!! AAATAAAAATAAAAATTCTA+AGG - chr3.4:76160971-76160990 None:intergenic 5.0%
!!! ATTTAATTTAATATGAAAAT+TGG - chr3.4:76162626-76162645 None:intergenic 5.0%
ACAAGCTGCAACCTTGTTCC+TGG - chr3.4:76162721-76162740 None:intergenic 50.0%
ACTCCAAGCCCAACATTGTG+AGG - chr3.4:76161234-76161253 None:intergenic 50.0%
ATGTTGGGCTTGGAGTTACC+AGG + chr3.4:76161238-76161257 MS.gene044157:CDS 50.0%
CAAGCTGCAACCTTGTTCCT+GGG - chr3.4:76162720-76162739 None:intergenic 50.0%
CAAGGATGGTTGTACCTGTC+AGG - chr3.4:76164100-76164119 None:intergenic 50.0%
CATGAGGAGGAGAGGTAATC+CGG - chr3.4:76163116-76163135 None:intergenic 50.0%
CGCAAACCAATTGGGTAGCA+AGG + chr3.4:76163463-76163482 MS.gene044157:CDS 50.0%
CGCCAACATTCATTGGAAGC+TGG - chr3.4:76164505-76164524 None:intergenic 50.0%
CGTTGAGGTAGTGTCATGTC+TGG + chr3.4:76160935-76160954 MS.gene044157:intron 50.0%
CTCCAAGCCCAACATTGTGA+GGG - chr3.4:76161233-76161252 None:intergenic 50.0%
GCCCTTGAAGTTAGAGCTAC+TGG + chr3.4:76161499-76161518 MS.gene044157:CDS 50.0%
GCCTCAAAAGTCTTGGTTGC+AGG + chr3.4:76163676-76163695 MS.gene044157:CDS 50.0%
GCTAACCGTGATCTTGTCAC+TGG + chr3.4:76162915-76162934 MS.gene044157:CDS 50.0%
GGGAACTCATGTCTGCAGTA+TGG - chr3.4:76162104-76162123 None:intergenic 50.0%
TAGCAGGATTGACGATGCTG+TGG + chr3.4:76163376-76163395 MS.gene044157:CDS 50.0%
TGGGACCATCATAACGGCAT+AGG - chr3.4:76162259-76162278 None:intergenic 50.0%
TTCCCTCACAATGTTGGGCT+TGG + chr3.4:76161228-76161247 MS.gene044157:CDS 50.0%
TTGATGCACTTGTGGCTGCA+TGG + chr3.4:76164384-76164403 MS.gene044157:CDS 50.0%
! GCCAAGCATTTTGTGGGAGA+TGG + chr3.4:76162741-76162760 MS.gene044157:CDS 50.0%
! TCAGCAGATGCCTTTTCAGC+TGG - chr3.4:76161087-76161106 None:intergenic 50.0%
!! AGGGAGTGTTCCAGCTGAAA+AGG + chr3.4:76161074-76161093 MS.gene044157:CDS 50.0%
!! CAGATTGGCAGGGTATTGAC+CGG + chr3.4:76163094-76163113 MS.gene044157:CDS 50.0%
AGAAGCAGAACCCCCACTAC+AGG - chr3.4:76160471-76160490 None:intergenic 55.0%
AGGTCTGCAGAGATCCAAGG+TGG + chr3.4:76161644-76161663 MS.gene044157:intron 55.0%
CACAGGTCTGCAGAGATCCA+AGG + chr3.4:76161641-76161660 MS.gene044157:intron 55.0%
CTGGCAAACTGGCAAGGACA+TGG + chr3.4:76164465-76164484 MS.gene044157:CDS 55.0%
GAAGCAGAACCCCCACTACA+GGG - chr3.4:76160470-76160489 None:intergenic 55.0%
GCGAGACTTAGATCAGCGAG+TGG - chr3.4:76163446-76163465 None:intergenic 55.0%
GGTCTGCAGAGATCCAAGGT+GGG + chr3.4:76161645-76161664 MS.gene044157:intron 55.0%
GTCTGCAGAGATCCAAGGTG+GGG + chr3.4:76161646-76161665 MS.gene044157:CDS 55.0%
GTTCCCTTCCTGGAATTGCC+AGG - chr3.4:76161754-76161773 None:intergenic 55.0%
TCATAGCAACGTCCCCACCT+TGG - chr3.4:76161661-76161680 None:intergenic 55.0%
TTCTTGGGAAGGGGAAGCAG+TGG - chr3.4:76163655-76163674 None:intergenic 55.0%
! AGCAGGGAGTGTGTTGAGTG+GGG + chr3.4:76161050-76161069 MS.gene044157:intron 55.0%
! GAGCAGGGAGTGTGTTGAGT+GGG + chr3.4:76161049-76161068 MS.gene044157:intron 55.0%
! GGAGATGGTGGCACAACCAA+GGG + chr3.4:76162756-76162775 MS.gene044157:CDS 55.0%
! GTTGAAGCTGGTGTCAGTGC+TGG + chr3.4:76163153-76163172 MS.gene044157:CDS 55.0%
! TGAGCAGGGAGTGTGTTGAG+TGG + chr3.4:76161048-76161067 MS.gene044157:intron 55.0%
!! TTGGTGATGGTGCTTGGACC+TGG - chr3.4:76164287-76164306 None:intergenic 55.0%
ATGGTGCTTGGACCTGGCTC+AGG - chr3.4:76164281-76164300 None:intergenic 60.0%
CTTGTGGCTGCATGGCTTCC+TGG + chr3.4:76164392-76164411 MS.gene044157:CDS 60.0%
GGAGTGTGTTGAGTGGGGGA+GGG + chr3.4:76161055-76161074 MS.gene044157:CDS 60.0%
TGTTCTCGTCACTGGGCGTC+CGG + chr3.4:76164334-76164353 MS.gene044157:CDS 60.0%
! ACACCTTGGCCTTCAGTGCC+AGG - chr3.4:76164413-76164432 None:intergenic 60.0%
! CTTCCTGGCACTGAAGGCCA+AGG + chr3.4:76164407-76164426 MS.gene044157:CDS 60.0%
! GCAGGGAGTGTGTTGAGTGG+GGG + chr3.4:76161051-76161070 MS.gene044157:intron 60.0%
! GCATGGCTTCCTGGCACTGA+AGG + chr3.4:76164401-76164420 MS.gene044157:CDS 60.0%
! GGGAGATGGTGGCACAACCA+AGG + chr3.4:76162755-76162774 MS.gene044157:CDS 60.0%
! GGGAGTGTGTTGAGTGGGGG+AGG + chr3.4:76161054-76161073 MS.gene044157:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 76160450 76164589 76160450 ID=MS.gene044157
chr3.4 mRNA 76160450 76164589 76160450 ID=MS.gene044157.t1;Parent=MS.gene044157
chr3.4 exon 76160450 76160669 76160450 ID=MS.gene044157.t1.exon1;Parent=MS.gene044157.t1
chr3.4 CDS 76160450 76160669 76160450 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76161055 76161259 76161055 ID=MS.gene044157.t1.exon2;Parent=MS.gene044157.t1
chr3.4 CDS 76161055 76161259 76161055 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76161462 76161552 76161462 ID=MS.gene044157.t1.exon3;Parent=MS.gene044157.t1
chr3.4 CDS 76161462 76161552 76161462 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76161646 76161791 76161646 ID=MS.gene044157.t1.exon4;Parent=MS.gene044157.t1
chr3.4 CDS 76161646 76161791 76161646 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76162722 76162965 76162722 ID=MS.gene044157.t1.exon5;Parent=MS.gene044157.t1
chr3.4 CDS 76162722 76162965 76162722 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76163081 76163185 76163081 ID=MS.gene044157.t1.exon6;Parent=MS.gene044157.t1
chr3.4 CDS 76163081 76163185 76163081 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76163302 76163484 76163302 ID=MS.gene044157.t1.exon7;Parent=MS.gene044157.t1
chr3.4 CDS 76163302 76163484 76163302 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76163577 76163781 76163577 ID=MS.gene044157.t1.exon8;Parent=MS.gene044157.t1
chr3.4 CDS 76163577 76163781 76163577 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
chr3.4 exon 76164105 76164589 76164105 ID=MS.gene044157.t1.exon9;Parent=MS.gene044157.t1
chr3.4 CDS 76164105 76164589 76164105 ID=cds.MS.gene044157.t1;Parent=MS.gene044157.t1
Gene Sequence

>MS.gene044157

ATGGGGAAATCTTCAATCCCTGTAGTGGGGGTTCTGCTTCTGTGCTTTTTGGTTTCATTTTCAGAAGCTGAATATAGAAAGTATAAAGATCCTAAGGTGCCATTGAATAGAAGAATCAAAGATTTGATGAGTAGAATGACTTTGGAGGAAAAGATAGGTCAAATGACTCAGCTTGAAAGGAGTGTTGCTACTCCTGAAGCCATGACCAAGTACTTCATTGGTAAACTACTCATCACTTTGCTACTCAAATCTAGTAGTTTTTTATATTGTTTGATGTTGTCATGTTTTTCTGAATCTGAGTGTGTGATGATAGATTTGTGTAAAGGGTACTATGTAGCAGTAGTAGTACTGACACTTCAGATCAAATGTGTGTGGTGGTGTCGGTGTCCGACACTTACAATGTGTGTGGTGGTGTCGGTGTCCGACACTTACTAGACACTGACACTACATTCAGTTATTCTATTTTCTCAAATTATTATCAGTGTCGTTGAGGTAGTGTCATGTCTGGTGTCAGCATTCCTTAGAATTTTTATTTTTATTTTTATTTTATTGTTTTGCTGTAATGAGGTGATTTTATGGATATGTGACTTGTCATTGATGAGCAGGGAGTGTGTTGAGTGGGGGAGGGAGTGTTCCAGCTGAAAAGGCATCTGCTGAGACTTGGGTGAAAATGGTGAATCAGATCCAAAATGCAGCTTTATCTACTCCTCTTGGGATTCCAATGATTTATGGGATAGATGCTGTTCATGGTCACAATAATGTCTACAATGCTACTATTTTCCCTCACAATGTTGGGCTTGGAGTTACCAGGCAAGTTTATGTATATGCAGGAATTTTAATAGCCATGAAATGATTGAAAAGAAGAACGAATTAGTAGTGACATTAAATTCATATTTGATAACTTGTAACTGGAAGCTATATACTTGAAGAAGTGAACCTTTTCAATAAACACAAATCTAGCAATTTAGTGCATTTCTTTGCTTTTATTGTAATGAAATCTACTGTTTATTAGGGATCCAGTGCTAATAAAAAAGATTGGAGAAGCAACTGCCCTTGAAGTTAGAGCTACTGGAATTCCATATGTGTTTGCTCCATGTATTGCGGTAAAGAAGCAGTGTTTCAATATTCTGTTATTTGAATCATATGTAACATTGATCAAGTTTGCTGATATTTTGATGGACCATTCATTAACACAGGTCTGCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAAGATCCTAAGATTGTTAAAACTATGACTGAAATTATACCTGGTCTTCAAGGAGATATTCCTGGCAATTCCAGGAAGGGAACTCCTTTTGTTGCTGGAAAGTAAGTTTTGCTACAAGCTTTGTTTTGAAACGAAAATTTTAATGTCACAAGTCTTGTAGTTGTATGGTTGGTGATTTTCTATGAAGGGTTCAGAAACATGAAATACATTTATAATTTTTTTTTTGAAAAACATTTATAAATTCTTTTGAACATCCATAACTAAAGTTTCCTGGTAATAGCATTGTATTGATTTATATGTTTTCTTAATTACATTTGTTTTGTTTTGCCTGTTTCTGGTCATAAGTTTTATATCAGTGTGGCACTTGTTCAGCTTTCATCGGGGAAAATATGTTTGTTTAATGCGGTAGACCATACTGCAGACATGAGTTCCCCCATCAATCGGAGCATCAATTATTTACAGTAGATAAAGTTTATGTTTTCCTGGCTTTTTCATTCACCAAAATAAAAGGGAGAAGAAAAAGAAATAGAAAAGATGGTGGACCCATAAGCTTCTTTTTTATGGTCCTATGCCGTTATGATGGTCCCACACATATGGGTTTTTTCAAATCATTTGAATGGTTGGGCTTACCATATTTTGCATTCAAATGGCTGGACCATCTATAATGTAAATATGACCATGCACACAACACACACAAAGATATGAGCTGCTAAAGTTGAATTATATATTAGGAGCCCAATTACACAAAAAGTCTTGGTCATAAAGCATGCATGCAATGTCTTTATCACACATAATTCATAAAGTTAAATAAATAGCACATTAAGGTAATGTATGTGTGTTTGATTCGATGTAATCAATAATTTTATCTTATAATTTATATATGATATGTTTAGATTTAATATTTCTGTGTCTGATTTCGAATGACAAAGTTTCCAATTTTCATATTAAATTAAATAATGAATAGCAGCTCATTTATTGTATGTATAGAACTGAAATAAAAATGACCCTTCATTTTTATTACTTTGACCCAGGAACAAGGTTGCAGCTTGTGCCAAGCATTTTGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATAAACTACAAAGGACTGCTCGGAATTCACATGCCAGCATACTATGACTCAATTATCAAGGGTGTTTCAACAGTTATGATCTCCTACACTAGCTGGAATGGGAAAAAGATGCATGCTAACCGTGATCTTGTCACTGGTTATCTCAAGAACAAACTGCGGTTCAGGGTAATACAATTTATCTAAATAGATTTCTAATGTAAAAAAATTGAACTACATATCATGTAAGAAAGGAAAAGATGTAGATAGCTACATATCATGTAATTTTTCTTCCATCTTGTAGGGTTTTGTCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCATACTCTGTTGAAGCTGGTGTCAGTGCTGGAATTGATATGGTAAATATTATTTTCAGTTCATGCAGTAAACGAGAGAAACATAAACTGTGTTTTTTTTAGTCTGAAAGTTTAATATTTTGAAAAAAAATTCTAATTAACATTCACATTGTTTGCAGATTATGGTTCCCTATAACTTTACTGAGTTCATTGATGACCTAACCTTTCAAGTAAAGAACAATATTATCCCAATTAGCAGGATTGACGATGCTGTGGCAAGAATCTTAAGAGTAAAATTTACCATGGGCCTTTTTGAAAATCCACTCGCTGATCTAAGTCTCGCAAACCAATTGGGTAGCAAGGTACATTTTCTTATGAATGCCATTTGAACATGTGCTGAATGCTTCATGCATTTTGAGTTTGTTTTGTTGATCGCATATCATGTCTTAAACAGGAACATAGAGAGTTAGCAAGAGAAGCTGTTCGGAAATCCCTAGTGCTGCTAAAGAATGGTAAATATGCAAACAAGCCACTGCTTCCCCTTCCCAAGAAAGCCTCAAAAGTCTTGGTTGCAGGAAGTCATGCTGACAATTTGGGTAATCAATGTGGTGGATGGACAATTACTTGGCAGGGACTTAGTGGTAGTGATCTTACAACGGGTAAGTCAACTCATTTAATGTGCACAAAAGTTACTTCGAAAAGCTATACAATTCTAGAATCCGCACTTAGAATGTCTGTTAGATTGTAATAGTTTTTATATATTACAGTTAGGATATCTAAAATTAAATGTCTATATAACAAATAGTATTCGGTTAATGATTCTTAGTCCAAGATGATTCTATGATTTCTTTCTTCCTGTCCGTAAACACAACTGGTAAGATGAAAAACATTCATACAGTGAGATATGTTTTTTTTTCTCTTTCCATAGCATCCTTTTATGGGAAATTGTAAAACATCTGATAAGATTATTTTTTCCTGACAGGTACAACCATCCTTGATGCTATAAAACAAACAGTTGATCCTGCAACTGAAGTTGTCTACAACGAAAATCCAGATGCTAGTTTTATCAAGTCAAACAAATTTTCTTATGCCATAGTTATTGTGGGAGAAAAACCTTATGCTGAAACATTTGGTGACAGTTTGAATCTAACAATACCTGAGCCAGGTCCAAGCACCATCACCAATGTATGTGGCTCAATTCAATGTGTAGTTGTTCTCGTCACTGGGCGTCCGGTTGTGATTCAGCCATATCTATCAAAAATTGATGCACTTGTGGCTGCATGGCTTCCTGGCACTGAAGGCCAAGGTGTTACTGACGTTCTCTATGGTGACTTTGAATTCACTGGCAAACTGGCAAGGACATGGTTCAAGACAGTAGACCAGCTTCCAATGAATGTTGGCGATAAACATTATGATCCTCTATTTCCATTTGGATTTGGTTTGACTACAAACCTTACCAAATATTGA

Protein sequence

>MS.gene044157.t1

MGKSSIPVVGVLLLCFLVSFSEAEYRKYKDPKVPLNRRIKDLMSRMTLEEKIGQMTQLERSVATPEAMTKYFIGSVLSGGGSVPAEKASAETWVKMVNQIQNAALSTPLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGVTRDPVLIKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVKTMTEIIPGLQGDIPGNSRKGTPFVAGKNKVAACAKHFVGDGGTTKGINENNTVINYKGLLGIHMPAYYDSIIKGVSTVMISYTSWNGKKMHANRDLVTGYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVEAGVSAGIDMIMVPYNFTEFIDDLTFQVKNNIIPISRIDDAVARILRVKFTMGLFENPLADLSLANQLGSKEHRELAREAVRKSLVLLKNGKYANKPLLPLPKKASKVLVAGSHADNLGNQCGGWTITWQGLSGSDLTTGTTILDAIKQTVDPATEVVYNENPDASFIKSNKFSYAIVIVGEKPYAETFGDSLNLTIPEPGPSTITNVCGSIQCVVVLVTGRPVVIQPYLSKIDALVAAWLPGTEGQGVTDVLYGDFEFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGFGLTTNLTKY