Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044228.t1 | XP_004501981.1 | 78.9 | 412 | 59 | 6 | 5 | 412 | 3 | 390 | 1.20E-181 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044228.t1 | Q9FH04 | 63.2 | 399 | 118 | 7 | 17 | 410 | 15 | 389 | 9.5e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044228.t1 | A0A1S2YAL7 | 78.9 | 412 | 59 | 6 | 5 | 412 | 3 | 390 | 8.7e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044228 | MS.gene79768 | PPI |
| MS.gene044228 | MS.gene49741 | PPI |
| MS.gene030545 | MS.gene044228 | PPI |
| MS.gene044228 | MS.gene83309 | PPI |
| MS.gene044228 | MS.gene069804 | PPI |
| MS.gene044228 | MS.gene042841 | PPI |
| MS.gene044228 | MS.gene73688 | PPI |
| MS.gene044228 | MS.gene70145 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044228.t1 | MTR_3g079180 | 74.817 | 409 | 74 | 6 | 8 | 412 | 3 | 386 | 0.0 | 602 |
| MS.gene044228.t1 | MTR_5g087710 | 69.952 | 416 | 94 | 7 | 1 | 412 | 3 | 391 | 0.0 | 561 |
| MS.gene044228.t1 | MTR_3g079170 | 77.551 | 294 | 24 | 6 | 112 | 401 | 26 | 281 | 2.00e-150 | 427 |
| MS.gene044228.t1 | MTR_3g099460 | 52.357 | 403 | 160 | 7 | 16 | 411 | 13 | 390 | 2.80e-137 | 398 |
| MS.gene044228.t1 | MTR_3g099460 | 52.109 | 403 | 154 | 9 | 16 | 411 | 13 | 383 | 6.51e-132 | 384 |
| MS.gene044228.t1 | MTR_1g069430 | 44.500 | 400 | 192 | 6 | 15 | 410 | 4 | 377 | 9.30e-112 | 333 |
| MS.gene044228.t1 | MTR_3g099460 | 50.720 | 347 | 141 | 7 | 70 | 411 | 6 | 327 | 8.80e-110 | 326 |
| MS.gene044228.t1 | MTR_3g099460 | 57.143 | 294 | 112 | 4 | 16 | 302 | 13 | 299 | 5.29e-109 | 324 |
| MS.gene044228.t1 | MTR_7g099040 | 43.350 | 406 | 188 | 7 | 15 | 410 | 6 | 379 | 5.19e-107 | 321 |
| MS.gene044228.t1 | MTR_3g099460 | 56.122 | 294 | 108 | 5 | 16 | 302 | 13 | 292 | 1.47e-103 | 310 |
| MS.gene044228.t1 | MTR_6g068930 | 42.500 | 400 | 196 | 6 | 17 | 412 | 8 | 377 | 2.58e-100 | 303 |
| MS.gene044228.t1 | MTR_7g068330 | 41.565 | 409 | 210 | 7 | 7 | 410 | 1 | 385 | 1.28e-95 | 291 |
| MS.gene044228.t1 | MTR_3g089940 | 40.494 | 405 | 203 | 7 | 16 | 412 | 6 | 380 | 1.37e-94 | 289 |
| MS.gene044228.t1 | MTR_3g089977 | 39.950 | 403 | 204 | 7 | 16 | 410 | 6 | 378 | 2.22e-93 | 286 |
| MS.gene044228.t1 | MTR_3g089970 | 40.247 | 405 | 204 | 7 | 16 | 412 | 7 | 381 | 2.64e-93 | 286 |
| MS.gene044228.t1 | MTR_3g089940 | 40.099 | 404 | 204 | 7 | 17 | 412 | 7 | 380 | 2.70e-93 | 285 |
| MS.gene044228.t1 | MTR_7g068320 | 40.394 | 406 | 212 | 8 | 11 | 410 | 12 | 393 | 3.76e-92 | 283 |
| MS.gene044228.t1 | MTR_0001s0660 | 37.157 | 401 | 208 | 10 | 17 | 408 | 6 | 371 | 3.99e-81 | 257 |
| MS.gene044228.t1 | MTR_3g089940 | 45.847 | 301 | 151 | 4 | 16 | 312 | 6 | 298 | 1.20e-79 | 249 |
| MS.gene044228.t1 | MTR_5g045710 | 37.624 | 404 | 207 | 11 | 17 | 410 | 6 | 374 | 1.28e-79 | 250 |
| MS.gene044228.t1 | MTR_3g089940 | 45.333 | 300 | 152 | 4 | 17 | 312 | 7 | 298 | 2.44e-78 | 246 |
| MS.gene044228.t1 | MTR_5g045710 | 34.985 | 323 | 166 | 10 | 98 | 410 | 3 | 291 | 5.80e-53 | 178 |
| MS.gene044228.t1 | MTR_8g095220 | 29.216 | 421 | 253 | 15 | 1 | 408 | 34 | 422 | 5.05e-27 | 112 |
| MS.gene044228.t1 | MTR_8g095220 | 31.481 | 270 | 165 | 8 | 1 | 259 | 34 | 294 | 1.32e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044228.t1 | AT5G42250 | 63.158 | 399 | 118 | 7 | 17 | 410 | 15 | 389 | 4.24e-180 | 507 |
| MS.gene044228.t1 | AT1G22430 | 52.899 | 414 | 156 | 8 | 9 | 412 | 4 | 388 | 1.17e-142 | 412 |
| MS.gene044228.t1 | AT1G22430 | 52.899 | 414 | 156 | 8 | 9 | 412 | 4 | 388 | 1.17e-142 | 412 |
| MS.gene044228.t1 | AT4G22110 | 54.703 | 404 | 152 | 9 | 15 | 412 | 11 | 389 | 1.44e-141 | 409 |
| MS.gene044228.t1 | AT4G22110 | 54.703 | 404 | 152 | 9 | 15 | 412 | 11 | 389 | 1.44e-141 | 409 |
| MS.gene044228.t1 | AT1G22440 | 53.676 | 408 | 150 | 7 | 15 | 412 | 8 | 386 | 1.10e-139 | 404 |
| MS.gene044228.t1 | AT5G43940 | 44.975 | 398 | 189 | 5 | 15 | 408 | 4 | 375 | 4.70e-115 | 341 |
| MS.gene044228.t1 | AT1G22430 | 57.525 | 299 | 114 | 5 | 9 | 301 | 4 | 295 | 3.52e-114 | 337 |
| MS.gene044228.t1 | AT5G43940 | 43.720 | 414 | 191 | 7 | 15 | 412 | 4 | 391 | 5.23e-111 | 331 |
| MS.gene044228.t1 | AT5G24760 | 42.543 | 409 | 201 | 7 | 8 | 412 | 3 | 381 | 1.03e-102 | 310 |
| MS.gene044228.t1 | AT1G22430 | 55.839 | 274 | 108 | 5 | 9 | 276 | 4 | 270 | 2.07e-99 | 298 |
| MS.gene044228.t1 | AT1G22430 | 55.839 | 274 | 108 | 5 | 9 | 276 | 4 | 270 | 2.07e-99 | 298 |
| MS.gene044228.t1 | AT4G22110 | 58.935 | 263 | 95 | 5 | 15 | 271 | 11 | 266 | 6.99e-98 | 293 |
| MS.gene044228.t1 | AT1G77120 | 42.079 | 404 | 194 | 8 | 16 | 410 | 5 | 377 | 3.14e-97 | 296 |
| MS.gene044228.t1 | AT1G64710 | 41.235 | 405 | 201 | 9 | 15 | 410 | 4 | 380 | 6.63e-96 | 292 |
| MS.gene044228.t1 | AT5G24760 | 42.147 | 382 | 187 | 7 | 35 | 412 | 1 | 352 | 1.20e-94 | 288 |
| MS.gene044228.t1 | AT5G24760 | 42.147 | 382 | 187 | 7 | 35 | 412 | 1 | 352 | 1.20e-94 | 288 |
| MS.gene044228.t1 | AT1G32780 | 42.271 | 414 | 195 | 12 | 15 | 412 | 5 | 390 | 3.54e-89 | 275 |
| MS.gene044228.t1 | AT1G64710 | 40.000 | 385 | 194 | 9 | 35 | 410 | 1 | 357 | 2.02e-87 | 270 |
| MS.gene044228.t1 | AT1G64710 | 37.725 | 334 | 172 | 8 | 85 | 410 | 6 | 311 | 1.50e-66 | 214 |
| MS.gene044228.t1 | AT5G24760 | 42.029 | 276 | 129 | 6 | 141 | 412 | 19 | 267 | 5.22e-60 | 196 |
| MS.gene044228.t1 | AT5G63620 | 24.745 | 392 | 253 | 11 | 22 | 402 | 57 | 417 | 1.77e-21 | 96.3 |
| MS.gene044228.t1 | AT5G63620 | 26.384 | 307 | 203 | 9 | 22 | 317 | 57 | 351 | 4.01e-21 | 95.1 |
| MS.gene044228.t1 | AT5G63620 | 26.693 | 251 | 166 | 6 | 22 | 262 | 57 | 299 | 2.82e-18 | 85.5 |
Find 107 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTCATGAGTTGGAGTTTA+AGG | 0.153657 | 3.3:+68080522 | MS.gene044228:CDS |
| GGGTCAACAGTTGCTATATT+TGG | 0.187036 | 3.3:+68078484 | MS.gene044228:CDS |
| GTTTAAGTAGAAGTAGAATT+TGG | 0.197622 | 3.3:-68080207 | None:intergenic |
| TCACAATCTGGTAGGAAAAT+TGG | 0.217622 | 3.3:-68077993 | None:intergenic |
| GGTACATGAGATTTGGGATT+TGG | 0.232303 | 3.3:-68080166 | None:intergenic |
| TGTGGAGCAACTAGGATTAT+TGG | 0.249725 | 3.3:+68078650 | MS.gene044228:CDS |
| TCTCCTTGGTTGCCTAGATA+TGG | 0.266835 | 3.3:+68078077 | MS.gene044228:CDS |
| GCCTCATGACCCAAAATTCT+TGG | 0.277018 | 3.3:-68077675 | None:intergenic |
| CCGAATTGGTACATGAGATT+TGG | 0.279085 | 3.3:-68080173 | None:intergenic |
| GTACATGAGATTTGGGATTT+GGG | 0.316477 | 3.3:-68080165 | None:intergenic |
| ATTTAATCAGGAAAGAAGTT+TGG | 0.318718 | 3.3:+68079108 | MS.gene044228:intron |
| CGAATTGGTACATGAGATTT+GGG | 0.319478 | 3.3:-68080172 | None:intergenic |
| GTTAAAACTTGTAAATTTGT+AGG | 0.320831 | 3.3:+68078424 | MS.gene044228:CDS |
| AGCAGACCTTTGCATCTTAT+AGG | 0.331773 | 3.3:-68077223 | None:intergenic |
| GGTCAACAGTTGCTATATTT+GGG | 0.357976 | 3.3:+68078485 | MS.gene044228:CDS |
| TACAACAGGAAGAGCCTTAT+GGG | 0.361891 | 3.3:+68080120 | MS.gene044228:intron |
| TTTAAGTAGAAGTAGAATTT+GGG | 0.363120 | 3.3:-68080206 | None:intergenic |
| CTCCTTGGTTGCCTAGATAT+GGG | 0.369273 | 3.3:+68078078 | MS.gene044228:CDS |
| TTACAACAGGAAGAGCCTTA+TGG | 0.371741 | 3.3:+68080119 | MS.gene044228:intron |
| GCCACAGTGATGTCACTCTT+TGG | 0.376178 | 3.3:+68077497 | MS.gene044228:CDS |
| TTAAAACTTGTAAATTTGTA+GGG | 0.402053 | 3.3:+68078425 | MS.gene044228:CDS |
| AGTGTCTTCGATGTGTGATT+TGG | 0.403564 | 3.3:+68080581 | MS.gene044228:CDS |
| ACTTCTACTTAAACGTTACA+TGG | 0.407271 | 3.3:+68080216 | MS.gene044228:CDS |
| TGATAGGGCATATGCCTTCT+CGG | 0.409114 | 3.3:+68078223 | MS.gene044228:CDS |
| GGACTCACAGACTTTGTTCA+TGG | 0.411553 | 3.3:+68079129 | MS.gene044228:CDS |
| GAGAAGGCATATGCCCTATC+AGG | 0.413626 | 3.3:-68078221 | None:intergenic |
| ACAGTTGCTATATTTGGGCT+TGG | 0.416309 | 3.3:+68078490 | MS.gene044228:CDS |
| GCAGAGGGAGCTAGACTTTG+TGG | 0.419195 | 3.3:+68078632 | MS.gene044228:CDS |
| TGGGTTTGAGTCCTCCGAAT+TGG | 0.422699 | 3.3:-68080187 | None:intergenic |
| TTAACTGCAGGAACTGCAAT+TGG | 0.427299 | 3.3:+68080489 | MS.gene044228:intron |
| CCTTCATGATGGGAAGTATT+GGG | 0.433138 | 3.3:+68079796 | MS.gene044228:CDS |
| TCCTTCATGATGGGAAGTAT+TGG | 0.438483 | 3.3:+68079795 | MS.gene044228:CDS |
| ATCCACAAATTCCTCCTGAT+AGG | 0.443711 | 3.3:+68078207 | MS.gene044228:CDS |
| CACCAATGCCTCGTGAAGTT+CGG | 0.446032 | 3.3:+68077449 | MS.gene044228:CDS |
| GCCCTATCAGGAGGAATTTG+TGG | 0.453916 | 3.3:-68078209 | None:intergenic |
| GGGTTTGAGTCCTCCATATG+TGG | 0.456417 | 3.3:-68080145 | None:intergenic |
| TCTATACACTCCTCACAATC+TGG | 0.457455 | 3.3:-68078005 | None:intergenic |
| CCAAATCTCATGTACCAATT+CGG | 0.460062 | 3.3:+68080173 | MS.gene044228:CDS |
| AGAACAGCAGGTGTGGAGCC+AGG | 0.460110 | 3.3:+68078463 | MS.gene044228:CDS |
| AAACTAGCAACAACAATTGA+AGG | 0.464051 | 3.3:+68077187 | MS.gene044228:CDS |
| TCCCATTCAAAGTTTCTCCT+TGG | 0.467329 | 3.3:+68078063 | MS.gene044228:CDS |
| CTCCATATGTGGATCCCATA+AGG | 0.470691 | 3.3:-68080134 | None:intergenic |
| ATTAGTACAACGGTTGCTCT+TGG | 0.474142 | 3.3:-68078039 | None:intergenic |
| ACTAGATTCACTGACATAAA+CGG | 0.475270 | 3.3:+68078104 | MS.gene044228:CDS |
| AATCTAGTGTTCCCATATCT+AGG | 0.479844 | 3.3:-68078089 | None:intergenic |
| TGGATCAATCTTTAGTACAT+TGG | 0.482928 | 3.3:-68078189 | None:intergenic |
| AGCCTTATGGGATCCACATA+TGG | 0.485976 | 3.3:+68080132 | MS.gene044228:CDS |
| CCCAATACTTCCCATCATGA+AGG | 0.490533 | 3.3:-68079796 | None:intergenic |
| TCTATAACCAATGGCTCACC+AGG | 0.492988 | 3.3:-68077409 | None:intergenic |
| TGTCACTCTTTGGAAGATGC+AGG | 0.494222 | 3.3:+68077507 | MS.gene044228:CDS |
| CTAGACTTTGTGGAGCAACT+AGG | 0.495288 | 3.3:+68078642 | MS.gene044228:CDS |
| TGGAAACAAATCTGTGAGCC+AGG | 0.500954 | 3.3:+68079161 | MS.gene044228:CDS |
| AAGGAAACCTGGTGAGCCAT+TGG | 0.503675 | 3.3:+68077402 | MS.gene044228:CDS |
| CGAACTTCACGAGGCATTGG+TGG | 0.505809 | 3.3:-68077448 | None:intergenic |
| AACCAAGGAGAAACTTTGAA+TGG | 0.508581 | 3.3:-68078065 | None:intergenic |
| TAGTTTATGATTGTCTTCCA+TGG | 0.508754 | 3.3:-68077170 | None:intergenic |
| TCTAGTGAGGTCCTTCATGA+TGG | 0.513744 | 3.3:+68079785 | MS.gene044228:CDS |
| ACAACAATTGAAGGAAAAGA+AGG | 0.514230 | 3.3:+68077196 | MS.gene044228:CDS |
| ATCCGAACTTCACGAGGCAT+TGG | 0.516695 | 3.3:-68077451 | None:intergenic |
| AGCATATGCTTCTTGTAGAA+AGG | 0.517256 | 3.3:+68079420 | MS.gene044228:CDS |
| GATGTAACTGAAGTAACAAA+AGG | 0.522782 | 3.3:+68077957 | MS.gene044228:CDS |
| ACCAAGGAGAAACTTTGAAT+GGG | 0.524737 | 3.3:-68078064 | None:intergenic |
| GAACAGCAGGTGTGGAGCCA+GGG | 0.526658 | 3.3:+68078464 | MS.gene044228:CDS |
| TTGTAGGGGTAGGTGCTGCT+TGG | 0.528518 | 3.3:+68078440 | MS.gene044228:CDS |
| GCTGCTGTTGCAAGGAAACC+TGG | 0.533031 | 3.3:+68077391 | MS.gene044228:intron |
| GGTGCTGCTTGGAGAACAGC+AGG | 0.537682 | 3.3:+68078451 | MS.gene044228:CDS |
| TGTAGGGTTGTGGAAAGCGT+AGG | 0.539712 | 3.3:+68077930 | MS.gene044228:intron |
| TGAATTTGTGACTCATGAGT+TGG | 0.551068 | 3.3:+68080513 | MS.gene044228:CDS |
| ATGTGTTGGTATGACATCAT+TGG | 0.553416 | 3.3:+68079390 | MS.gene044228:CDS |
| CTGAGGCTTATCCTAGCTCC+TGG | 0.554246 | 3.3:-68079761 | None:intergenic |
| GTAGGGTTGTGGAAAGCGTA+GGG | 0.558720 | 3.3:+68077931 | MS.gene044228:intron |
| GGTTGTGGAAAGCGTAGGGA+AGG | 0.560131 | 3.3:+68077935 | MS.gene044228:CDS |
| GAACTTCACGAGGCATTGGT+GGG | 0.560153 | 3.3:-68077447 | None:intergenic |
| TCCACAAATTCCTCCTGATA+GGG | 0.564310 | 3.3:+68078208 | MS.gene044228:CDS |
| ACTTGTAAATTTGTAGGGGT+AGG | 0.567193 | 3.3:+68078430 | MS.gene044228:CDS |
| GTTATCATAGAGATGACTGA+TGG | 0.568363 | 3.3:+68079346 | MS.gene044228:CDS |
| TTGATTTCTTAGGTTGCAGA+GGG | 0.573432 | 3.3:+68078617 | MS.gene044228:intron |
| AAACTGTAGCTGCTGTTGCA+AGG | 0.576786 | 3.3:+68077383 | MS.gene044228:intron |
| GGGTGGACAAGCCAGGAGCT+AGG | 0.580686 | 3.3:+68079750 | MS.gene044228:CDS |
| TTTGTTCATGGTGAGGAATG+TGG | 0.586966 | 3.3:+68079141 | MS.gene044228:CDS |
| AACTTCACGAGGCATTGGTG+GGG | 0.587358 | 3.3:-68077446 | None:intergenic |
| GGACAACCTATAAGATGCAA+AGG | 0.590172 | 3.3:+68077217 | MS.gene044228:CDS |
| CACAGACTTTGTTCATGGTG+AGG | 0.590684 | 3.3:+68079134 | MS.gene044228:CDS |
| CTAGTGAGGTCCTTCATGAT+GGG | 0.592056 | 3.3:+68079786 | MS.gene044228:CDS |
| TCTTCGATGTGTGATTTGGA+TGG | 0.597600 | 3.3:+68080585 | MS.gene044228:CDS |
| ATTGATTTCTTAGGTTGCAG+AGG | 0.599458 | 3.3:+68078616 | MS.gene044228:intron |
| TAAAACTTGTAAATTTGTAG+GGG | 0.606828 | 3.3:+68078426 | MS.gene044228:CDS |
| ATGATGTCTTCTATAACCAA+TGG | 0.612545 | 3.3:-68077418 | None:intergenic |
| ACTTAAACGTTACATGGACA+AGG | 0.612858 | 3.3:+68080222 | MS.gene044228:CDS |
| TGCTTGGAGAACAGCAGGTG+TGG | 0.624709 | 3.3:+68078456 | MS.gene044228:CDS |
| TGAATGGGAAATTAGTACAA+CGG | 0.629184 | 3.3:-68078049 | None:intergenic |
| TTGATACACCACAACCGAGA+AGG | 0.629956 | 3.3:-68078237 | None:intergenic |
| AGCAACTAGGATTATTGGTG+TGG | 0.636179 | 3.3:+68078655 | MS.gene044228:CDS |
| ATCATAGAGATGACTGATGG+AGG | 0.637658 | 3.3:+68079349 | MS.gene044228:CDS |
| ATACGAATCCGAACTTCACG+AGG | 0.640026 | 3.3:-68077457 | None:intergenic |
| GAAGGACCTCACTAGAACTG+AGG | 0.642932 | 3.3:-68079778 | None:intergenic |
| CTTATGGGATCCACATATGG+AGG | 0.652537 | 3.3:+68080135 | MS.gene044228:CDS |
| AATCTCATGTACCAATTCGG+AGG | 0.653656 | 3.3:+68080176 | MS.gene044228:CDS |
| AATATAGCAACTGTTGACCC+TGG | 0.658258 | 3.3:-68078481 | None:intergenic |
| GATAAGCCTCAGTTCTAGTG+AGG | 0.659475 | 3.3:+68079772 | MS.gene044228:CDS |
| AAGGCATATGCCCTATCAGG+AGG | 0.664688 | 3.3:-68078218 | None:intergenic |
| TACACTCCTCACAATCTGGT+AGG | 0.669954 | 3.3:-68078001 | None:intergenic |
| TACATTGGCGATGTCAACCA+CGG | 0.676753 | 3.3:-68078174 | None:intergenic |
| AAGTTTCAGCGAGTATACCG+TGG | 0.679034 | 3.3:+68078157 | MS.gene044228:CDS |
| TTCCCATATCTAGGCAACCA+AGG | 0.683585 | 3.3:-68078080 | None:intergenic |
| GGTTATAGAAGACATCATTG+TGG | 0.707672 | 3.3:+68077423 | MS.gene044228:CDS |
| TCCAAAGAGTGACATCACTG+TGG | 0.771958 | 3.3:-68077498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATTCAAAAATCAAA+AGG | - | chr3.3:68077609-68077628 | None:intergenic | 15.0% |
| !! | TTAAAACTTGTAAATTTGTA+GGG | + | chr3.3:68078425-68078444 | MS.gene044228:CDS | 15.0% |
| !! | AAACAGGAACAAAAAAAAAA+TGG | - | chr3.3:68077567-68077586 | None:intergenic | 20.0% |
| !! | ATAAAATCAACCCTATAAAA+TGG | + | chr3.3:68077813-68077832 | MS.gene044228:intron | 20.0% |
| !! | GTTAAAACTTGTAAATTTGT+AGG | + | chr3.3:68078424-68078443 | MS.gene044228:CDS | 20.0% |
| !! | TAAAACTTGTAAATTTGTAG+GGG | + | chr3.3:68078426-68078445 | MS.gene044228:CDS | 20.0% |
| !! | TATAGATAAGAACAATATGA+CGG | + | chr3.3:68078299-68078318 | MS.gene044228:intron | 20.0% |
| !! | TGTTAAACTAAATCAAAATG+TGG | + | chr3.3:68079312-68079331 | MS.gene044228:intron | 20.0% |
| !! | TTAATATTGAAGTTTCAAGA+GGG | - | chr3.3:68079191-68079210 | None:intergenic | 20.0% |
| !! | TTTAAGTAGAAGTAGAATTT+GGG | - | chr3.3:68080209-68080228 | None:intergenic | 20.0% |
| !!! | AACCATGAAAAATTTGAAAT+TGG | + | chr3.3:68078683-68078702 | MS.gene044228:CDS | 20.0% |
| !!! | TACCAATTTCAAATTTTTCA+TGG | - | chr3.3:68078688-68078707 | None:intergenic | 20.0% |
| !!! | TATTTTCATAACTTCTTCAT+AGG | + | chr3.3:68078934-68078953 | MS.gene044228:intron | 20.0% |
| !!! | TCTAAAACTTCAAATGATAA+TGG | - | chr3.3:68077325-68077344 | None:intergenic | 20.0% |
| !!! | TTAACTAAATTTTGCTTTCA+GGG | + | chr3.3:68079704-68079723 | MS.gene044228:intron | 20.0% |
| !!! | TTATCCTTTTGTTTCATTTT+TGG | + | chr3.3:68080371-68080390 | MS.gene044228:intron | 20.0% |
| !!! | TTTGTGAAGTTTTACTTTAA+AGG | - | chr3.3:68079578-68079597 | None:intergenic | 20.0% |
| ! | ATGTCCAAAAATGAAACAAA+AGG | - | chr3.3:68080352-68080371 | None:intergenic | 25.0% |
| ! | ATTTAATCAGGAAAGAAGTT+TGG | + | chr3.3:68079108-68079127 | MS.gene044228:intron | 25.0% |
| ! | CAACAAAATATTGGACTTAA+TGG | - | chr3.3:68078742-68078761 | None:intergenic | 25.0% |
| ! | CACTTATAGAAATTACAAAC+AGG | - | chr3.3:68077583-68077602 | None:intergenic | 25.0% |
| ! | CTAACACTTAACAAACAAAA+TGG | - | chr3.3:68079682-68079701 | None:intergenic | 25.0% |
| ! | CTGATACCATGTTAAAATTT+GGG | - | chr3.3:68079925-68079944 | None:intergenic | 25.0% |
| ! | GATCCATTATACATAATTCT+TGG | + | chr3.3:68077299-68077318 | MS.gene044228:intron | 25.0% |
| ! | GGTTAATATGTTTCAGTTAA+AGG | - | chr3.3:68079648-68079667 | None:intergenic | 25.0% |
| ! | GTCCTTCAAAACATATAAAA+GGG | - | chr3.3:68077640-68077659 | None:intergenic | 25.0% |
| ! | GTCTATCAAACTTTATGAAA+GGG | - | chr3.3:68079556-68079575 | None:intergenic | 25.0% |
| ! | GTTAATATTGAAGTTTCAAG+AGG | - | chr3.3:68079192-68079211 | None:intergenic | 25.0% |
| ! | GTTTAAGTAGAAGTAGAATT+TGG | - | chr3.3:68080210-68080229 | None:intergenic | 25.0% |
| ! | TCTGATACCATGTTAAAATT+TGG | - | chr3.3:68079926-68079945 | None:intergenic | 25.0% |
| ! | TGATACCATGTTAAAATTTG+GGG | - | chr3.3:68079924-68079943 | None:intergenic | 25.0% |
| ! | TTCTTTCCTGATTAAATGAA+AGG | - | chr3.3:68079105-68079124 | None:intergenic | 25.0% |
| !! | AACAACCTTTCTTTTATTCA+TGG | - | chr3.3:68078348-68078367 | None:intergenic | 25.0% |
| !! | AACCAATTTTTATGTGATGT+AGG | + | chr3.3:68077913-68077932 | MS.gene044228:intron | 25.0% |
| !! | ACCAATTTTTATGTGATGTA+GGG | + | chr3.3:68077914-68077933 | MS.gene044228:intron | 25.0% |
| !! | CTTTTTCCTTTCATTTAATC+AGG | + | chr3.3:68079096-68079115 | MS.gene044228:intron | 25.0% |
| !! | GTTAACTAAATTTTGCTTTC+AGG | + | chr3.3:68079703-68079722 | MS.gene044228:intron | 25.0% |
| !! | TTGCAATTGATTGATTTCTT+AGG | + | chr3.3:68078607-68078626 | MS.gene044228:intron | 25.0% |
| !! | TTTCCAATGTGTTAAAGTTT+TGG | + | chr3.3:68080458-68080477 | MS.gene044228:intron | 25.0% |
| !!! | AAAAGGTATTATGGTACTAA+AGG | + | chr3.3:68078797-68078816 | MS.gene044228:intron | 25.0% |
| !!! | AAGACTTTGAAACATTGAAT+TGG | - | chr3.3:68078396-68078415 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTCAATGAAACA+AGG | - | chr3.3:68077370-68077389 | None:intergenic | 25.0% |
| !!! | AGTTCCTTTTGTTTCATTTT+TGG | + | chr3.3:68080345-68080364 | MS.gene044228:intron | 25.0% |
| !!! | ATAATACCTTTTTCTAGTGA+AGG | - | chr3.3:68078789-68078808 | None:intergenic | 25.0% |
| !!! | CAGTTTTTTCAATGAAACAA+GGG | - | chr3.3:68077369-68077388 | None:intergenic | 25.0% |
| !!! | GATTATTGTTTTGAATGTGT+TGG | + | chr3.3:68079376-68079395 | MS.gene044228:CDS | 25.0% |
| !!! | GCTTTTGATTTATTGAGTAA+AGG | + | chr3.3:68080556-68080575 | MS.gene044228:CDS | 25.0% |
| !!! | TAATACCTTTTTCTAGTGAA+GGG | - | chr3.3:68078788-68078807 | None:intergenic | 25.0% |
| !!! | TACCCTTTTATATGTTTTGA+AGG | + | chr3.3:68077635-68077654 | MS.gene044228:intron | 25.0% |
| !!! | TTCACTAGAAAAAGGTATTA+TGG | + | chr3.3:68078788-68078807 | MS.gene044228:intron | 25.0% |
| AAAATTCTTGGAAAAATGCC+AGG | - | chr3.3:68077666-68077685 | None:intergenic | 30.0% | |
| AAACTAGCAACAACAATTGA+AGG | + | chr3.3:68077187-68077206 | MS.gene044228:CDS | 30.0% | |
| ACAAATAATTGTTTCAGCCA+AGG | + | chr3.3:68079593-68079612 | MS.gene044228:intron | 30.0% | |
| ACAACAATTGAAGGAAAAGA+AGG | + | chr3.3:68077196-68077215 | MS.gene044228:CDS | 30.0% | |
| ACCCTACATCACATAAAAAT+TGG | - | chr3.3:68077918-68077937 | None:intergenic | 30.0% | |
| ACTAGATTCACTGACATAAA+CGG | + | chr3.3:68078104-68078123 | MS.gene044228:CDS | 30.0% | |
| ACTTCTACTTAAACGTTACA+TGG | + | chr3.3:68080216-68080235 | MS.gene044228:CDS | 30.0% | |
| AGAACAGATCCTAACTATTA+GGG | + | chr3.3:68079018-68079037 | MS.gene044228:intron | 30.0% | |
| ATGATGTCTTCTATAACCAA+TGG | - | chr3.3:68077421-68077440 | None:intergenic | 30.0% | |
| ATTGGCCATGAATAAAAGAA+AGG | + | chr3.3:68078340-68078359 | MS.gene044228:intron | 30.0% | |
| CAAATAATTGTTTCAGCCAA+GGG | + | chr3.3:68079594-68079613 | MS.gene044228:intron | 30.0% | |
| CTTGATGAGAGTTTATAAAG+AGG | + | chr3.3:68079853-68079872 | MS.gene044228:intron | 30.0% | |
| GATGTAACTGAAGTAACAAA+AGG | + | chr3.3:68077957-68077976 | MS.gene044228:CDS | 30.0% | |
| GGTCCTTCAAAACATATAAA+AGG | - | chr3.3:68077641-68077660 | None:intergenic | 30.0% | |
| GGTCTATCAAACTTTATGAA+AGG | - | chr3.3:68079557-68079576 | None:intergenic | 30.0% | |
| GGTGGTTAACAACAAAATAT+TGG | - | chr3.3:68078751-68078770 | None:intergenic | 30.0% | |
| GTTTCTACTTAAACGTTACA+TGG | + | chr3.3:68080244-68080263 | MS.gene044228:intron | 30.0% | |
| TACTTAATTAGACGAGCTTA+CGG | + | chr3.3:68078874-68078893 | MS.gene044228:intron | 30.0% | |
| TGAATGGGAAATTAGTACAA+CGG | - | chr3.3:68078052-68078071 | None:intergenic | 30.0% | |
| TGGATCAATCTTTAGTACAT+TGG | - | chr3.3:68078192-68078211 | None:intergenic | 30.0% | |
| TGGCCAAGAATTATGTATAA+TGG | - | chr3.3:68077305-68077324 | None:intergenic | 30.0% | |
| ! | ATTGGACTTAATGGTTGATA+TGG | - | chr3.3:68078733-68078752 | None:intergenic | 30.0% |
| ! | CAACGCAAATCCATTTTATA+GGG | - | chr3.3:68077826-68077845 | None:intergenic | 30.0% |
| ! | CTCAAATATTTAAGACCCAT+GGG | + | chr3.3:68077866-68077885 | MS.gene044228:intron | 30.0% |
| ! | GGCATTTTTCCAAGAATTTT+GGG | + | chr3.3:68077666-68077685 | MS.gene044228:CDS | 30.0% |
| ! | TAAATTTTGCTTTCAGGGTT+GGG | + | chr3.3:68079709-68079728 | MS.gene044228:intron | 30.0% |
| ! | TGGCATTTTTCCAAGAATTT+TGG | + | chr3.3:68077665-68077684 | MS.gene044228:CDS | 30.0% |
| ! | TGGGGAAAAACAATTGTTTT+AGG | + | chr3.3:68079728-68079747 | MS.gene044228:CDS | 30.0% |
| !! | GGGGAAAAACAATTGTTTTA+GGG | + | chr3.3:68079729-68079748 | MS.gene044228:CDS | 30.0% |
| !!! | AAAAACAATTGTTTTAGGGG+TGG | + | chr3.3:68079733-68079752 | MS.gene044228:CDS | 30.0% |
| !!! | GGGAAAAACAATTGTTTTAG+GGG | + | chr3.3:68079730-68079749 | MS.gene044228:CDS | 30.0% |
| AACAATATGACGGTCCATTA+GGG | + | chr3.3:68078309-68078328 | MS.gene044228:intron | 35.0% | |
| AACACTTCATTATCTTCCCA+TGG | - | chr3.3:68077885-68077904 | None:intergenic | 35.0% | |
| AACCAAGGAGAAACTTTGAA+TGG | - | chr3.3:68078068-68078087 | None:intergenic | 35.0% | |
| AATCTAGTGTTCCCATATCT+AGG | - | chr3.3:68078092-68078111 | None:intergenic | 35.0% | |
| ACACTTCATTATCTTCCCAT+GGG | - | chr3.3:68077884-68077903 | None:intergenic | 35.0% | |
| ACCAAGGAGAAACTTTGAAT+GGG | - | chr3.3:68078067-68078086 | None:intergenic | 35.0% | |
| ACTTAAACGTTACATGGACA+AGG | + | chr3.3:68080222-68080241 | MS.gene044228:CDS | 35.0% | |
| ACTTGTAAATTTGTAGGGGT+AGG | + | chr3.3:68078430-68078449 | MS.gene044228:CDS | 35.0% | |
| ACTTGTTTGAGCTTATCTAG+TGG | + | chr3.3:68078833-68078852 | MS.gene044228:intron | 35.0% | |
| AGCATATGCTTCTTGTAGAA+AGG | + | chr3.3:68079420-68079439 | MS.gene044228:CDS | 35.0% | |
| AGGCCAAAACTTTAACACAT+TGG | - | chr3.3:68080464-68080483 | None:intergenic | 35.0% | |
| AGTTCCTGCAGTTAATCAAT+AGG | - | chr3.3:68080484-68080503 | None:intergenic | 35.0% | |
| ATATTGAAGTTTCAAGAGGG+TGG | - | chr3.3:68079188-68079207 | None:intergenic | 35.0% | |
| CAGAACAGATCCTAACTATT+AGG | + | chr3.3:68079017-68079036 | MS.gene044228:intron | 35.0% | |
| CAGTTAAAGGCAACTAGATT+AGG | - | chr3.3:68079635-68079654 | None:intergenic | 35.0% | |
| CCAAATCTCATGTACCAATT+CGG | + | chr3.3:68080173-68080192 | MS.gene044228:CDS | 35.0% | |
| CCATGTAACGTTTAAGTAGA+AGG | - | chr3.3:68080219-68080238 | None:intergenic | 35.0% | |
| CCTTCTACTTAAACGTTACA+TGG | + | chr3.3:68080306-68080325 | MS.gene044228:intron | 35.0% | |
| CGAATTGGTACATGAGATTT+GGG | - | chr3.3:68080175-68080194 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr3.3:68079900-68079919 | None:intergenic | 35.0% | |
| GAACAGATCCTAACTATTAG+GGG | + | chr3.3:68079019-68079038 | MS.gene044228:intron | 35.0% | |
| GAGCATGTAGAAGAACTTAA+TGG | - | chr3.3:68077849-68077868 | None:intergenic | 35.0% | |
| GATGAGAGTTTATAAAGAGG+AGG | + | chr3.3:68079856-68079875 | MS.gene044228:intron | 35.0% | |
| GGTCAACAGTTGCTATATTT+GGG | + | chr3.3:68078485-68078504 | MS.gene044228:CDS | 35.0% | |
| GGTTATAGAAGACATCATTG+TGG | + | chr3.3:68077423-68077442 | MS.gene044228:CDS | 35.0% | |
| GTACAATTCCCCTAATAGTT+AGG | - | chr3.3:68079030-68079049 | None:intergenic | 35.0% | |
| GTTATCATAGAGATGACTGA+TGG | + | chr3.3:68079346-68079365 | MS.gene044228:CDS | 35.0% | |
| TCACAATCTGGTAGGAAAAT+TGG | - | chr3.3:68077996-68078015 | None:intergenic | 35.0% | |
| TCCATTAGGGTCAGATTAAT+TGG | + | chr3.3:68078322-68078341 | MS.gene044228:intron | 35.0% | |
| TGAATTTGTGACTCATGAGT+TGG | + | chr3.3:68080513-68080532 | MS.gene044228:CDS | 35.0% | |
| TGTCTCTATATGACAGTGTA+AGG | - | chr3.3:68079481-68079500 | None:intergenic | 35.0% | |
| ! | AAATTTTGCTTTCAGGGTTG+GGG | + | chr3.3:68079710-68079729 | MS.gene044228:intron | 35.0% |
| ! | AATTTTCCTACCAGATTGTG+AGG | + | chr3.3:68077995-68078014 | MS.gene044228:CDS | 35.0% |
| ! | ATGTGTTGGTATGACATCAT+TGG | + | chr3.3:68079390-68079409 | MS.gene044228:CDS | 35.0% |
| ! | ATTGATTTCTTAGGTTGCAG+AGG | + | chr3.3:68078616-68078635 | MS.gene044228:intron | 35.0% |
| ! | CTAAATTTTGCTTTCAGGGT+TGG | + | chr3.3:68079708-68079727 | MS.gene044228:intron | 35.0% |
| ! | GCAACGCAAATCCATTTTAT+AGG | - | chr3.3:68077827-68077846 | None:intergenic | 35.0% |
| ! | GCTCAAATATTTAAGACCCA+TGG | + | chr3.3:68077865-68077884 | MS.gene044228:intron | 35.0% |
| ! | GTACATGAGATTTGGGATTT+GGG | - | chr3.3:68080168-68080187 | None:intergenic | 35.0% |
| ! | TTGATTTCTTAGGTTGCAGA+GGG | + | chr3.3:68078617-68078636 | MS.gene044228:intron | 35.0% |
| ! | TTTTATGTGATGTAGGGTTG+TGG | + | chr3.3:68077920-68077939 | MS.gene044228:intron | 35.0% |
| !! | TTAGGCCCCAAATTTTAACA+TGG | + | chr3.3:68079916-68079935 | MS.gene044228:intron | 35.0% |
| AACAAAATGGTCGAAGCAAG+TGG | - | chr3.3:68079669-68079688 | None:intergenic | 40.0% | |
| AACTCTCATCAAGAGTCTCA+TGG | - | chr3.3:68079846-68079865 | None:intergenic | 40.0% | |
| AATATAGCAACTGTTGACCC+TGG | - | chr3.3:68078484-68078503 | None:intergenic | 40.0% | |
| AATCTCATGTACCAATTCGG+AGG | + | chr3.3:68080176-68080195 | MS.gene044228:CDS | 40.0% | |
| ACAGTGTAAGGATGTGTGTT+TGG | - | chr3.3:68079469-68079488 | None:intergenic | 40.0% | |
| ACAGTTGCTATATTTGGGCT+TGG | + | chr3.3:68078490-68078509 | MS.gene044228:CDS | 40.0% | |
| ACTCTCATCAAGAGTCTCAT+GGG | - | chr3.3:68079845-68079864 | None:intergenic | 40.0% | |
| AGCAACTAGGATTATTGGTG+TGG | + | chr3.3:68078655-68078674 | MS.gene044228:CDS | 40.0% | |
| AGCAGACCTTTGCATCTTAT+AGG | - | chr3.3:68077226-68077245 | None:intergenic | 40.0% | |
| AGGCTCTTCCTGTTGTAATT+TGG | - | chr3.3:68080117-68080136 | None:intergenic | 40.0% | |
| AGTGTCTTCGATGTGTGATT+TGG | + | chr3.3:68080581-68080600 | MS.gene044228:CDS | 40.0% | |
| ATATTTGGGCTTGGATCTGT+TGG | + | chr3.3:68078499-68078518 | MS.gene044228:intron | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | + | chr3.3:68079940-68079959 | MS.gene044228:intron | 40.0% | |
| ATCATAGAGATGACTGATGG+AGG | + | chr3.3:68079349-68079368 | MS.gene044228:CDS | 40.0% | |
| ATCCACAAATTCCTCCTGAT+AGG | + | chr3.3:68078207-68078226 | MS.gene044228:CDS | 40.0% | |
| ATTAGTACAACGGTTGCTCT+TGG | - | chr3.3:68078042-68078061 | None:intergenic | 40.0% | |
| ATTCTTGGAAAAATGCCAGG+AGG | - | chr3.3:68077663-68077682 | None:intergenic | 40.0% | |
| CAAAGCCCTTCACTAGAAAA+AGG | + | chr3.3:68078780-68078799 | MS.gene044228:intron | 40.0% | |
| CCGAATTGGTACATGAGATT+TGG | - | chr3.3:68080176-68080195 | None:intergenic | 40.0% | |
| GAACAATATGACGGTCCATT+AGG | + | chr3.3:68078308-68078327 | MS.gene044228:intron | 40.0% | |
| GCCAATTAATCTGACCCTAA+TGG | - | chr3.3:68078326-68078345 | None:intergenic | 40.0% | |
| GCTCTTCCTGTTGTAATTTG+GGG | - | chr3.3:68080115-68080134 | None:intergenic | 40.0% | |
| GGACAACCTATAAGATGCAA+AGG | + | chr3.3:68077217-68077236 | MS.gene044228:CDS | 40.0% | |
| GGCTCTTCCTGTTGTAATTT+GGG | - | chr3.3:68080116-68080135 | None:intergenic | 40.0% | |
| GGGTCAACAGTTGCTATATT+TGG | + | chr3.3:68078484-68078503 | MS.gene044228:CDS | 40.0% | |
| TAAACGTTACATGGACAAGG+TGG | + | chr3.3:68080225-68080244 | MS.gene044228:intron | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | + | chr3.3:68079941-68079960 | MS.gene044228:intron | 40.0% | |
| TCCACAAATTCCTCCTGATA+GGG | + | chr3.3:68078208-68078227 | MS.gene044228:CDS | 40.0% | |
| TCCCATTCAAAGTTTCTCCT+TGG | + | chr3.3:68078063-68078082 | MS.gene044228:CDS | 40.0% | |
| TCTATACACTCCTCACAATC+TGG | - | chr3.3:68078008-68078027 | None:intergenic | 40.0% | |
| TGTGGAGCAACTAGGATTAT+TGG | + | chr3.3:68078650-68078669 | MS.gene044228:CDS | 40.0% | |
| TTAACTGCAGGAACTGCAAT+TGG | + | chr3.3:68080489-68080508 | MS.gene044228:intron | 40.0% | |
| TTACAACAGGAAGAGCCTTA+TGG | + | chr3.3:68080119-68080138 | MS.gene044228:intron | 40.0% | |
| TTCTTGCATAATAGCCTCAG+AGG | - | chr3.3:68079055-68079074 | None:intergenic | 40.0% | |
| TTCTTGGAAAAATGCCAGGA+GGG | - | chr3.3:68077662-68077681 | None:intergenic | 40.0% | |
| TTTGTTCATGGTGAGGAATG+TGG | + | chr3.3:68079141-68079160 | MS.gene044228:CDS | 40.0% | |
| ! | GACTCATGAGTTGGAGTTTA+AGG | + | chr3.3:68080522-68080541 | MS.gene044228:CDS | 40.0% |
| ! | GGTACATGAGATTTGGGATT+TGG | - | chr3.3:68080169-68080188 | None:intergenic | 40.0% |
| ! | TACAACAGGAAGAGCCTTAT+GGG | + | chr3.3:68080120-68080139 | MS.gene044228:intron | 40.0% |
| ! | TCCTTCATGATGGGAAGTAT+TGG | + | chr3.3:68079795-68079814 | MS.gene044228:CDS | 40.0% |
| ! | TCTTCGATGTGTGATTTGGA+TGG | + | chr3.3:68080585-68080604 | MS.gene044228:CDS | 40.0% |
| ! | TTGGATCTGTTGGATTAGAG+CGG | + | chr3.3:68078509-68078528 | MS.gene044228:intron | 40.0% |
| ! | TTGGCCTATTGATTAACTGC+AGG | + | chr3.3:68080477-68080496 | MS.gene044228:intron | 40.0% |
| !! | CCTTCATGATGGGAAGTATT+GGG | + | chr3.3:68079796-68079815 | MS.gene044228:CDS | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr3.3:68079898-68079917 | MS.gene044228:intron | 40.0% |
| !! | TCCAAGAATTTTGGGTCATG+AGG | + | chr3.3:68077674-68077693 | MS.gene044228:CDS | 40.0% |
| !! | TGAAGGGCTTTGAAACATGA+GGG | - | chr3.3:68078772-68078791 | None:intergenic | 40.0% |
| AAACTGTAGCTGCTGTTGCA+AGG | + | chr3.3:68077383-68077402 | MS.gene044228:intron | 45.0% | |
| AAGGTTTGAGTCCTCCGAAT+TGG | - | chr3.3:68080290-68080309 | None:intergenic | 45.0% | |
| AAGTTTCAGCGAGTATACCG+TGG | + | chr3.3:68078157-68078176 | MS.gene044228:CDS | 45.0% | |
| AGAGTCTCATCTATCCGATG+TGG | - | chr3.3:68079835-68079854 | None:intergenic | 45.0% | |
| ATACGAATCCGAACTTCACG+AGG | - | chr3.3:68077460-68077479 | None:intergenic | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr3.3:68079827-68079846 | None:intergenic | 45.0% | |
| CACAGACTTTGTTCATGGTG+AGG | + | chr3.3:68079134-68079153 | MS.gene044228:CDS | 45.0% | |
| CCCAATACTTCCCATCATGA+AGG | - | chr3.3:68079799-68079818 | None:intergenic | 45.0% | |
| CTAGACTTTGTGGAGCAACT+AGG | + | chr3.3:68078642-68078661 | MS.gene044228:CDS | 45.0% | |
| CTAGTGAGGTCCTTCATGAT+GGG | + | chr3.3:68079786-68079805 | MS.gene044228:CDS | 45.0% | |
| CTCCATATGTGGATCCCATA+AGG | - | chr3.3:68080137-68080156 | None:intergenic | 45.0% | |
| CTCCTTGGTTGCCTAGATAT+GGG | + | chr3.3:68078078-68078097 | MS.gene044228:CDS | 45.0% | |
| CTTATGGGATCCACATATGG+AGG | + | chr3.3:68080135-68080154 | MS.gene044228:CDS | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr3.3:68079818-68079837 | MS.gene044228:intron | 45.0% | |
| GAGTCTCATCTATCCGATGT+GGG | - | chr3.3:68079834-68079853 | None:intergenic | 45.0% | |
| GCCTCATGACCCAAAATTCT+TGG | - | chr3.3:68077678-68077697 | None:intergenic | 45.0% | |
| GGACTCACAGACTTTGTTCA+TGG | + | chr3.3:68079129-68079148 | MS.gene044228:CDS | 45.0% | |
| GTTAGGCCCCAAATTACAAC+AGG | + | chr3.3:68080106-68080125 | MS.gene044228:intron | 45.0% | |
| TACACTCCTCACAATCTGGT+AGG | - | chr3.3:68078004-68078023 | None:intergenic | 45.0% | |
| TACATTGGCGATGTCAACCA+CGG | - | chr3.3:68078177-68078196 | None:intergenic | 45.0% | |
| TCAAAATGTGGTTGCTGAGC+AGG | + | chr3.3:68079324-68079343 | MS.gene044228:intron | 45.0% | |
| TCCAAAGAGTGACATCACTG+TGG | - | chr3.3:68077501-68077520 | None:intergenic | 45.0% | |
| TCTAGTGAGGTCCTTCATGA+TGG | + | chr3.3:68079785-68079804 | MS.gene044228:CDS | 45.0% | |
| TCTATAACCAATGGCTCACC+AGG | - | chr3.3:68077412-68077431 | None:intergenic | 45.0% | |
| TCTCCTTGGTTGCCTAGATA+TGG | + | chr3.3:68078077-68078096 | MS.gene044228:CDS | 45.0% | |
| TCTGAGTCTGCGACTCTTTA+TGG | + | chr3.3:68078561-68078580 | MS.gene044228:intron | 45.0% | |
| TGATAGGGCATATGCCTTCT+CGG | + | chr3.3:68078223-68078242 | MS.gene044228:CDS | 45.0% | |
| TGGAAACAAATCTGTGAGCC+AGG | + | chr3.3:68079161-68079180 | MS.gene044228:CDS | 45.0% | |
| TGGACTCAAACCCACCAATT+CGG | + | chr3.3:68080273-68080292 | MS.gene044228:intron | 45.0% | |
| TTCCCATATCTAGGCAACCA+AGG | - | chr3.3:68078083-68078102 | None:intergenic | 45.0% | |
| TTGATACACCACAACCGAGA+AGG | - | chr3.3:68078240-68078259 | None:intergenic | 45.0% | |
| TTGCATAATAGCCTCAGAGG+TGG | - | chr3.3:68079052-68079071 | None:intergenic | 45.0% | |
| TTTGAGTCCTCCGAATTGGT+GGG | - | chr3.3:68080186-68080205 | None:intergenic | 45.0% | |
| ! | AGCCTTATGGGATCCACATA+TGG | + | chr3.3:68080132-68080151 | MS.gene044228:CDS | 45.0% |
| ! | GATAAGCCTCAGTTCTAGTG+AGG | + | chr3.3:68079772-68079791 | MS.gene044228:CDS | 45.0% |
| ! | GTACGTTTGAGTTTGACCCT+TGG | - | chr3.3:68079613-68079632 | None:intergenic | 45.0% |
| ! | TCTGTTGGATTAGAGCGGTA+TGG | + | chr3.3:68078514-68078533 | MS.gene044228:intron | 45.0% |
| ! | TGTCACTCTTTGGAAGATGC+AGG | + | chr3.3:68077507-68077526 | MS.gene044228:CDS | 45.0% |
| !! | ATTTTGGGTCATGAGGCAAC+TGG | + | chr3.3:68077681-68077700 | MS.gene044228:CDS | 45.0% |
| !! | GTGAAGGGCTTTGAAACATG+AGG | - | chr3.3:68078773-68078792 | None:intergenic | 45.0% |
| !! | TTTTGGGTCATGAGGCAACT+GGG | + | chr3.3:68077682-68077701 | MS.gene044228:CDS | 45.0% |
| !!! | TATGTTTTGAAGGACCCTCC+TGG | + | chr3.3:68077645-68077664 | MS.gene044228:intron | 45.0% |
| AAGGAAACCTGGTGAGCCAT+TGG | + | chr3.3:68077402-68077421 | MS.gene044228:CDS | 50.0% | |
| AAGGCATATGCCCTATCAGG+AGG | - | chr3.3:68078221-68078240 | None:intergenic | 50.0% | |
| AAGTTTCAAGAGGGTGGACC+TGG | - | chr3.3:68079182-68079201 | None:intergenic | 50.0% | |
| ACTCAAACCCACCAATTCGG+AGG | + | chr3.3:68080276-68080295 | MS.gene044228:intron | 50.0% | |
| ATCCGAACTTCACGAGGCAT+TGG | - | chr3.3:68077454-68077473 | None:intergenic | 50.0% | |
| CACCAATGCCTCGTGAAGTT+CGG | + | chr3.3:68077449-68077468 | MS.gene044228:CDS | 50.0% | |
| CATCTATCCGATGTGGGACT+TGG | - | chr3.3:68079828-68079847 | None:intergenic | 50.0% | |
| CTCGGTTGTGGTGTATCAAC+AGG | + | chr3.3:68078241-68078260 | MS.gene044228:intron | 50.0% | |
| GAAGGACCTCACTAGAACTG+AGG | - | chr3.3:68079781-68079800 | None:intergenic | 50.0% | |
| GCCACAGTGATGTCACTCTT+TGG | + | chr3.3:68077497-68077516 | MS.gene044228:CDS | 50.0% | |
| GCCCTATCAGGAGGAATTTG+TGG | - | chr3.3:68078212-68078231 | None:intergenic | 50.0% | |
| GGGTTTGAGTCCTCCATATG+TGG | - | chr3.3:68080148-68080167 | None:intergenic | 50.0% | |
| GTTTGAGTCCTCCGAATTGG+TGG | - | chr3.3:68080187-68080206 | None:intergenic | 50.0% | |
| TGGGTTTGAGTCCTCCGAAT+TGG | - | chr3.3:68080190-68080209 | None:intergenic | 50.0% | |
| ! | GAGAAGGCATATGCCCTATC+AGG | - | chr3.3:68078224-68078243 | None:intergenic | 50.0% |
| ! | GTAGGGTTGTGGAAAGCGTA+GGG | + | chr3.3:68077931-68077950 | MS.gene044228:intron | 50.0% |
| ! | TGTAGGGTTGTGGAAAGCGT+AGG | + | chr3.3:68077930-68077949 | MS.gene044228:intron | 50.0% |
| ! | TTGGTGCGTGAATAGGTTGG+TGG | - | chr3.3:68079967-68079986 | None:intergenic | 50.0% |
| !! | AACTTCACGAGGCATTGGTG+GGG | - | chr3.3:68077449-68077468 | None:intergenic | 50.0% |
| !! | AGGGCTTTGAAACATGAGGG+TGG | - | chr3.3:68078769-68078788 | None:intergenic | 50.0% |
| !! | CCTCACAAGCCGGTTTTGTA+AGG | + | chr3.3:68079888-68079907 | MS.gene044228:intron | 50.0% |
| !! | CCTTACAAAACCGGCTTGTG+AGG | - | chr3.3:68079891-68079910 | None:intergenic | 50.0% |
| !! | GAACTTCACGAGGCATTGGT+GGG | - | chr3.3:68077450-68077469 | None:intergenic | 50.0% |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | - | chr3.3:68079974-68079993 | None:intergenic | 50.0% |
| ACACTCCTCACCTCACAAGC+CGG | + | chr3.3:68080069-68080088 | MS.gene044228:intron | 55.0% | |
| CTGAGGCTTATCCTAGCTCC+TGG | - | chr3.3:68079764-68079783 | None:intergenic | 55.0% | |
| GCAGAGGGAGCTAGACTTTG+TGG | + | chr3.3:68078632-68078651 | MS.gene044228:CDS | 55.0% | |
| GCTGCTGTTGCAAGGAAACC+TGG | + | chr3.3:68077391-68077410 | MS.gene044228:intron | 55.0% | |
| GGCATATGCCTTCTCGGTTG+TGG | + | chr3.3:68078229-68078248 | MS.gene044228:intron | 55.0% | |
| GGGGAATTGTACCACCTCTG+AGG | + | chr3.3:68079038-68079057 | MS.gene044228:intron | 55.0% | |
| TGCTTGGAGAACAGCAGGTG+TGG | + | chr3.3:68078456-68078475 | MS.gene044228:CDS | 55.0% | |
| ! | GGTTGTGGAAAGCGTAGGGA+AGG | + | chr3.3:68077935-68077954 | MS.gene044228:CDS | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr3.3:68079886-68079905 | None:intergenic | 55.0% |
| !! | CACCAAGCCCAAAGAGTGCT+GGG | + | chr3.3:68079981-68080000 | MS.gene044228:intron | 55.0% |
| !! | CGAACTTCACGAGGCATTGG+TGG | - | chr3.3:68077451-68077470 | None:intergenic | 55.0% |
| !! | GGCTTGGTGCGTGAATAGGT+TGG | - | chr3.3:68079970-68079989 | None:intergenic | 55.0% |
| !! | TTGTAGGGGTAGGTGCTGCT+TGG | + | chr3.3:68078440-68078459 | MS.gene044228:CDS | 55.0% |
| !!! | GTTTTAGGGGTGGACAAGCC+AGG | + | chr3.3:68079743-68079762 | MS.gene044228:CDS | 55.0% |
| AGAACAGCAGGTGTGGAGCC+AGG | + | chr3.3:68078463-68078482 | MS.gene044228:CDS | 60.0% | |
| CCTCACGCCCAGCACTCTTT+GGG | - | chr3.3:68079991-68080010 | None:intergenic | 60.0% | |
| GAACAGCAGGTGTGGAGCCA+GGG | + | chr3.3:68078464-68078483 | MS.gene044228:CDS | 60.0% | |
| GCACTCCTCACCTCACAAGC+CGG | + | chr3.3:68079878-68079897 | MS.gene044228:intron | 60.0% | |
| ! | GCACCAAGCCCAAAGAGTGC+TGG | + | chr3.3:68079980-68079999 | MS.gene044228:intron | 60.0% |
| !! | AAAGAGTGCTGGGCGTGAGG+GGG | + | chr3.3:68079991-68080010 | MS.gene044228:intron | 60.0% |
| !! | CAAAGAGTGCTGGGCGTGAG+GGG | + | chr3.3:68079990-68080009 | MS.gene044228:intron | 60.0% |
| !! | CCAAAGAGTGCTGGGCGTGA+GGG | + | chr3.3:68079989-68080008 | MS.gene044228:intron | 60.0% |
| !! | GGTGCTGCTTGGAGAACAGC+AGG | + | chr3.3:68078451-68078470 | MS.gene044228:CDS | 60.0% |
| CCCTCACGCCCAGCACTCTT+TGG | - | chr3.3:68079992-68080011 | None:intergenic | 65.0% | |
| CGCCCAGCACTCTTTGGGCT+TGG | - | chr3.3:68079986-68080005 | None:intergenic | 65.0% | |
| GGGTGGACAAGCCAGGAGCT+AGG | + | chr3.3:68079750-68079769 | MS.gene044228:CDS | 65.0% | |
| ! | GTGAGGGGGGGGGGTGTATT+GGG | + | chr3.3:68080005-68080024 | MS.gene044228:intron | 65.0% |
| !! | AAGAGTGCTGGGCGTGAGGG+GGG | + | chr3.3:68079992-68080011 | MS.gene044228:intron | 65.0% |
| !! | CCCAAAGAGTGCTGGGCGTG+AGG | + | chr3.3:68079988-68080007 | MS.gene044228:intron | 65.0% |
| ! | CGTGAGGGGGGGGGGTGTAT+TGG | + | chr3.3:68080004-68080023 | MS.gene044228:intron | 70.0% |
| !! | AGAGTGCTGGGCGTGAGGGG+GGG | + | chr3.3:68079993-68080012 | MS.gene044228:intron | 70.0% |
| ! | AGTGCTGGGCGTGAGGGGGG+GGG | + | chr3.3:68079995-68080014 | MS.gene044228:intron | 75.0% |
| !! | GAGTGCTGGGCGTGAGGGGG+GGG | + | chr3.3:68079994-68080013 | MS.gene044228:intron | 75.0% |
| ! | GTGCTGGGCGTGAGGGGGGG+GGG | + | chr3.3:68079996-68080015 | MS.gene044228:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 68077172 | 68080615 | 68077172 | ID=MS.gene044228 |
| chr3.3 | mRNA | 68077172 | 68080615 | 68077172 | ID=MS.gene044228.t1;Parent=MS.gene044228 |
| chr3.3 | exon | 68077172 | 68077238 | 68077172 | ID=MS.gene044228.t1.exon1;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68077172 | 68077238 | 68077172 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68077392 | 68077528 | 68077392 | ID=MS.gene044228.t1.exon2;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68077392 | 68077528 | 68077392 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68077657 | 68077703 | 68077657 | ID=MS.gene044228.t1.exon3;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68077657 | 68077703 | 68077657 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68077935 | 68078247 | 68077935 | ID=MS.gene044228.t1.exon4;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68077935 | 68078247 | 68077935 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68078412 | 68078516 | 68078412 | ID=MS.gene044228.t1.exon5;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68078412 | 68078516 | 68078412 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68078629 | 68078704 | 68078629 | ID=MS.gene044228.t1.exon6;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68078629 | 68078704 | 68078629 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68079118 | 68079182 | 68079118 | ID=MS.gene044228.t1.exon7;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68079118 | 68079182 | 68079118 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68079346 | 68079441 | 68079346 | ID=MS.gene044228.t1.exon8;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68079346 | 68079441 | 68079346 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68079725 | 68079828 | 68079725 | ID=MS.gene044228.t1.exon9;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68079725 | 68079828 | 68079725 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68080132 | 68080243 | 68080132 | ID=MS.gene044228.t1.exon10;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68080132 | 68080243 | 68080132 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| chr3.3 | exon | 68080499 | 68080615 | 68080499 | ID=MS.gene044228.t1.exon11;Parent=MS.gene044228.t1 |
| chr3.3 | CDS | 68080499 | 68080615 | 68080499 | ID=cds.MS.gene044228.t1;Parent=MS.gene044228.t1 |
| Gene Sequence |
| Protein sequence |
