Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044235.t1 | XP_003601304.1 | 99 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 5.00E-150 | 540.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044235.t1 | F4IK01 | 74.5 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 2.8e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044235.t1 | G7J611 | 99.0 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 3.6e-150 | 540.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044235 | MS.gene67108 | PPI |
| MS.gene044235 | MS.gene028307 | PPI |
| MS.gene24383 | MS.gene044235 | PPI |
| MS.gene044235 | MS.gene36485 | PPI |
| MS.gene023147 | MS.gene044235 | PPI |
| MS.gene35150 | MS.gene044235 | PPI |
| MS.gene062778 | MS.gene044235 | PPI |
| MS.gene044235 | MS.gene044021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044235.t1 | MTR_3g079220 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044235.t1 | AT2G41350 | 74.733 | 281 | 71 | 0 | 5 | 285 | 13 | 293 | 7.72e-154 | 432 |
| MS.gene044235.t1 | AT2G41350 | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.76e-152 | 427 |
| MS.gene044235.t1 | AT2G21980 | 79.310 | 58 | 12 | 0 | 228 | 285 | 1 | 58 | 1.14e-24 | 94.4 |
Find 76 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTGGAGACTGATGCTTCT+TGG | 0.248800 | 3.3:-68111654 | None:intergenic |
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | 3.3:-68111713 | None:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | 3.3:+68111664 | MS.gene044235:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | 3.3:+68111967 | MS.gene044235:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | 3.3:+68115136 | MS.gene044235:CDS |
| AGCGGCTTCGTCTTTGGCTT+TGG | 0.309670 | 3.3:-68111803 | None:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.313819 | 3.3:-68111809 | None:intergenic |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | 3.3:+68111712 | MS.gene044235:CDS |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | 3.3:-68111746 | None:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | 3.3:-68112660 | None:intergenic |
| ATCGATATTCTGCGGCTTTG+AGG | 0.405298 | 3.3:-68111849 | None:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | 3.3:+68112175 | MS.gene044235:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | 3.3:-68111745 | None:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | 3.3:+68112293 | MS.gene044235:CDS |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | 3.3:-68115134 | None:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | 3.3:+68112264 | MS.gene044235:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | 3.3:+68112645 | MS.gene044235:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | 3.3:-68111739 | None:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | 3.3:+68111982 | MS.gene044235:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | 3.3:+68111977 | MS.gene044235:CDS |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | 3.3:+68112024 | MS.gene044235:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | 3.3:+68112215 | MS.gene044235:CDS |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | 3.3:-68115208 | None:intergenic |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | 3.3:-68112659 | None:intergenic |
| AGTATAATCGAGAAGAAACT+TGG | 0.471091 | 3.3:-68112257 | None:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | 3.3:+68112231 | MS.gene044235:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | 3.3:-68111740 | None:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | 3.3:+68112077 | MS.gene044235:CDS |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | 3.3:-68115133 | None:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | 3.3:-68112764 | None:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | 3.3:+68111988 | MS.gene044235:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | 3.3:+68115338 | MS.gene044235:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | 3.3:+68112018 | MS.gene044235:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | 3.3:+68115166 | MS.gene044235:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | 3.3:+68112216 | MS.gene044235:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | 3.3:-68112023 | None:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | 3.3:+68115428 | MS.gene044235:CDS |
| GAAATACCGGAGGCAAGTCT+TGG | 0.536097 | 3.3:-68115229 | None:intergenic |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | 3.3:+68112678 | MS.gene044235:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | 3.3:+68112199 | MS.gene044235:CDS |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | 3.3:+68112753 | MS.gene044235:CDS |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | 3.3:-68115203 | None:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | 3.3:+68115130 | MS.gene044235:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | 3.3:-68111719 | None:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | 3.3:+68112686 | MS.gene044235:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | 3.3:+68115429 | MS.gene044235:CDS |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | 3.3:+68115171 | MS.gene044235:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | 3.3:+68111686 | MS.gene044235:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | 3.3:-68115145 | None:intergenic |
| ACCTTGGGATCGATATTCTG+CGG | 0.574805 | 3.3:-68111857 | None:intergenic |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | 3.3:+68115156 | MS.gene044235:CDS |
| GCCGCAGAATATCGATCCCA+AGG | 0.586612 | 3.3:+68111856 | MS.gene044235:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | 3.3:+68115103 | MS.gene044235:intron |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | 3.3:-68112682 | None:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | 3.3:-68115204 | None:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | 3.3:-68112019 | None:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | 3.3:+68112207 | MS.gene044235:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | 3.3:+68115129 | MS.gene044235:CDS |
| CTTTGGAGAGAGTAACGAGA+TGG | 0.609598 | 3.3:-68111786 | None:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | 3.3:-68111671 | None:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | 3.3:+68115160 | MS.gene044235:CDS |
| GGAGACTGATGCTTCTTGGT+CGG | 0.625367 | 3.3:-68111650 | None:intergenic |
| AAGTTACCAAGACTTGCCTC+CGG | 0.628459 | 3.3:+68115223 | MS.gene044235:CDS |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | 3.3:+68112191 | MS.gene044235:CDS |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | 3.3:-68115397 | None:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | 3.3:+68115104 | MS.gene044235:intron |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | 3.3:+68112708 | MS.gene044235:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | 3.3:+68112204 | MS.gene044235:CDS |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | 3.3:-68115132 | None:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | 3.3:+68112275 | MS.gene044235:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | 3.3:+68112009 | MS.gene044235:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | 3.3:+68115430 | MS.gene044235:CDS |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | 3.3:+68112669 | MS.gene044235:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | 3.3:-68115118 | None:intergenic |
| ATCACGAGCTACGAGACGAG+CGG | 0.712760 | 3.3:-68111821 | None:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | 3.3:-68111763 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATATTAATTATTTT+AGG | + | chr3.3:68114561-68114580 | MS.gene044235:intron | 10.0% |
| !!! | TATTACTTTTTTATGAAATA+AGG | + | chr3.3:68113970-68113989 | MS.gene044235:intron | 10.0% |
| !!! | TGGAAATATTAATTATTTTA+GGG | + | chr3.3:68114562-68114581 | MS.gene044235:intron | 10.0% |
| !! | GTAAAAATGTAAAATGAATT+TGG | + | chr3.3:68112493-68112512 | MS.gene044235:intron | 15.0% |
| !! | GTATATAAATAGGATAAATT+TGG | + | chr3.3:68113475-68113494 | MS.gene044235:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | + | chr3.3:68113593-68113612 | MS.gene044235:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | + | chr3.3:68113847-68113866 | MS.gene044235:intron | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | + | chr3.3:68114397-68114416 | MS.gene044235:intron | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | + | chr3.3:68114398-68114417 | MS.gene044235:intron | 15.0% |
| !!! | GCATTGTTATTTTTATATAT+TGG | + | chr3.3:68115047-68115066 | MS.gene044235:intron | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | - | chr3.3:68114396-68114415 | None:intergenic | 15.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | - | chr3.3:68112994-68113013 | None:intergenic | 15.0% |
| !! | AAACACTATTCAAAAATTCT+GGG | - | chr3.3:68113378-68113397 | None:intergenic | 20.0% |
| !! | AAGAATATCATAACATAGAT+TGG | - | chr3.3:68114781-68114800 | None:intergenic | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | + | chr3.3:68114165-68114184 | MS.gene044235:intron | 20.0% |
| !! | AGAATATCATAACATAGATT+GGG | - | chr3.3:68114780-68114799 | None:intergenic | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | + | chr3.3:68114166-68114185 | MS.gene044235:intron | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | + | chr3.3:68113479-68113498 | MS.gene044235:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | + | chr3.3:68113526-68113545 | MS.gene044235:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | - | chr3.3:68113592-68113611 | None:intergenic | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | + | chr3.3:68113592-68113611 | MS.gene044235:intron | 20.0% |
| !! | TAAACACTATTCAAAAATTC+TGG | - | chr3.3:68113379-68113398 | None:intergenic | 20.0% |
| !! | TAGCAATTGAAGATAAAAAA+AGG | + | chr3.3:68115367-68115386 | MS.gene044235:CDS | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | - | chr3.3:68113418-68113437 | None:intergenic | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | + | chr3.3:68112867-68112886 | MS.gene044235:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | + | chr3.3:68112298-68112317 | MS.gene044235:intron | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | - | chr3.3:68113419-68113438 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | - | chr3.3:68114079-68114098 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | + | chr3.3:68113164-68113183 | MS.gene044235:intron | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | + | chr3.3:68114110-68114129 | MS.gene044235:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | + | chr3.3:68112146-68112165 | MS.gene044235:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | + | chr3.3:68114399-68114418 | MS.gene044235:intron | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | - | chr3.3:68115367-68115386 | None:intergenic | 20.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | - | chr3.3:68112767-68112786 | None:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | + | chr3.3:68113877-68113896 | MS.gene044235:intron | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | + | chr3.3:68114998-68115017 | MS.gene044235:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | + | chr3.3:68112392-68112411 | MS.gene044235:intron | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | - | chr3.3:68113953-68113972 | None:intergenic | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | + | chr3.3:68113878-68113897 | MS.gene044235:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | + | chr3.3:68114168-68114187 | MS.gene044235:intron | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | + | chr3.3:68112911-68112930 | MS.gene044235:intron | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | + | chr3.3:68114167-68114186 | MS.gene044235:intron | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | - | chr3.3:68113952-68113971 | None:intergenic | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | - | chr3.3:68112532-68112551 | None:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | - | chr3.3:68113728-68113747 | None:intergenic | 25.0% |
| !! | CTGTGTTAAAGTTTGAATTT+TGG | + | chr3.3:68112140-68112159 | MS.gene044235:intron | 25.0% |
| !! | TGTAAAATGAATTTGGAACT+TGG | + | chr3.3:68112500-68112519 | MS.gene044235:intron | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | - | chr3.3:68114163-68114182 | None:intergenic | 25.0% |
| !!! | AATTTAATTTGTCCGATCAA+AGG | - | chr3.3:68114489-68114508 | None:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | + | chr3.3:68112773-68112792 | MS.gene044235:intron | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | + | chr3.3:68115264-68115283 | MS.gene044235:intron | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | + | chr3.3:68112774-68112793 | MS.gene044235:intron | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | + | chr3.3:68112775-68112794 | MS.gene044235:intron | 25.0% |
| !!! | GTTTTTTTTTAGCTTTCTTG+TGG | + | chr3.3:68112168-68112187 | MS.gene044235:intron | 25.0% |
| !!! | TAATTATTTTAGGGTCTGTT+CGG | + | chr3.3:68114571-68114590 | MS.gene044235:intron | 25.0% |
| !!! | TGGTTTTGAACTAAAAATTG+AGG | + | chr3.3:68112318-68112337 | MS.gene044235:intron | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | + | chr3.3:68112776-68112795 | MS.gene044235:intron | 25.0% |
| AAACTACAATAATGTGCTCA+AGG | + | chr3.3:68112556-68112575 | MS.gene044235:intron | 30.0% | |
| AAAGAAGCTAAGTAGTTAGA+GGG | + | chr3.3:68113444-68113463 | MS.gene044235:intron | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | + | chr3.3:68113884-68113903 | MS.gene044235:intron | 30.0% | |
| AACTACAATAATGTGCTCAA+GGG | + | chr3.3:68112557-68112576 | MS.gene044235:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | + | chr3.3:68114018-68114037 | MS.gene044235:intron | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | + | chr3.3:68113986-68114005 | MS.gene044235:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | - | chr3.3:68113951-68113970 | None:intergenic | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | + | chr3.3:68113637-68113656 | MS.gene044235:intron | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | + | chr3.3:68113543-68113562 | MS.gene044235:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | + | chr3.3:68113892-68113911 | MS.gene044235:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | + | chr3.3:68114019-68114038 | MS.gene044235:intron | 30.0% | |
| AGTATAATCGAGAAGAAACT+TGG | - | chr3.3:68112260-68112279 | None:intergenic | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | + | chr3.3:68112921-68112940 | MS.gene044235:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | + | chr3.3:68113987-68114006 | MS.gene044235:intron | 30.0% | |
| ATGCAAGAAAACCAGTTTAA+TGG | - | chr3.3:68112968-68112987 | None:intergenic | 30.0% | |
| ATGTTAGATAAAAGGCTGTA+GGG | + | chr3.3:68112875-68112894 | MS.gene044235:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | + | chr3.3:68114125-68114144 | MS.gene044235:intron | 30.0% | |
| ATTATCACCAATTAGGGTTA+GGG | + | chr3.3:68111895-68111914 | MS.gene044235:intron | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | - | chr3.3:68114978-68114997 | None:intergenic | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | + | chr3.3:68112293-68112312 | MS.gene044235:CDS | 30.0% | |
| CTTGAACAAGAGAAACAAAA+AGG | + | chr3.3:68113018-68113037 | MS.gene044235:intron | 30.0% | |
| GCATGAGAAATATGAAATAC+CGG | - | chr3.3:68115245-68115264 | None:intergenic | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | + | chr3.3:68113912-68113931 | MS.gene044235:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | - | chr3.3:68113729-68113748 | None:intergenic | 30.0% | |
| TAAAGAAGCTAAGTAGTTAG+AGG | + | chr3.3:68113443-68113462 | MS.gene044235:intron | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | + | chr3.3:68112077-68112096 | MS.gene044235:CDS | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | - | chr3.3:68113841-68113860 | None:intergenic | 30.0% | |
| TAGAACACATAGAATTGAAG+TGG | + | chr3.3:68113636-68113655 | MS.gene044235:intron | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | - | chr3.3:68114979-68114998 | None:intergenic | 30.0% | |
| TCATCAAACATAAAAAAGGG+GGG | + | chr3.3:68114169-68114188 | MS.gene044235:intron | 30.0% | |
| TCTTCTCGATTATACTAGAA+AGG | + | chr3.3:68112264-68112283 | MS.gene044235:CDS | 30.0% | |
| TGCAAGAAAACCAGTTTAAT+GGG | - | chr3.3:68112967-68112986 | None:intergenic | 30.0% | |
| TGGAAGAAATTGAAGAATCT+GGG | + | chr3.3:68114640-68114659 | MS.gene044235:intron | 30.0% | |
| TTCAAAAATTCTGGGTAAAC+TGG | - | chr3.3:68113370-68113389 | None:intergenic | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | - | chr3.3:68113202-68113221 | None:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | + | chr3.3:68114979-68114998 | MS.gene044235:intron | 30.0% |
| ! | GAGCACATTATTGTAGTTTT+TGG | - | chr3.3:68112555-68112574 | None:intergenic | 30.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | - | chr3.3:68111895-68111914 | None:intergenic | 30.0% |
| !! | ATAATACTGGCTCTATTCAA+TGG | - | chr3.3:68113579-68113598 | None:intergenic | 30.0% |
| !! | TTGAGCATTGATACATAACT+TGG | + | chr3.3:68112353-68112372 | MS.gene044235:intron | 30.0% |
| !!! | AATTATTTTAGGGTCTGTTC+GGG | + | chr3.3:68114572-68114591 | MS.gene044235:intron | 30.0% |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | + | chr3.3:68112777-68112796 | MS.gene044235:intron | 30.0% |
| !!! | TTAAGAGAGTCAGCTTTTTT+TGG | - | chr3.3:68114890-68114909 | None:intergenic | 30.0% |
| AAAAAGGACAGAAAAGGAAG+AGG | + | chr3.3:68112927-68112946 | MS.gene044235:intron | 35.0% | |
| AAAATTCTGGGTAAACTGGT+TGG | - | chr3.3:68113366-68113385 | None:intergenic | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | + | chr3.3:68114542-68114561 | MS.gene044235:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | + | chr3.3:68114051-68114070 | MS.gene044235:intron | 35.0% | |
| ACTACAATAATGTGCTCAAG+GGG | + | chr3.3:68112558-68112577 | MS.gene044235:intron | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | + | chr3.3:68111889-68111908 | MS.gene044235:intron | 35.0% | |
| ACTTGTATCATGCAAGACTA+TGG | + | chr3.3:68113105-68113124 | MS.gene044235:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | + | chr3.3:68112081-68112100 | MS.gene044235:intron | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | + | chr3.3:68114518-68114537 | MS.gene044235:intron | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | - | chr3.3:68112662-68112681 | None:intergenic | 35.0% | |
| AGTCAATTTGGGAGATTGAA+GGG | - | chr3.3:68114967-68114986 | None:intergenic | 35.0% | |
| ATCATTCTCTACAAACTGAC+AGG | + | chr3.3:68114839-68114858 | MS.gene044235:intron | 35.0% | |
| CAATGGGTGATATTTCATTG+AGG | + | chr3.3:68112191-68112210 | MS.gene044235:CDS | 35.0% | |
| CATCAAACATAAAAAAGGGG+GGG | + | chr3.3:68114170-68114189 | MS.gene044235:intron | 35.0% | |
| CATTATCACCAATTAGGGTT+AGG | + | chr3.3:68111894-68111913 | MS.gene044235:intron | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | - | chr3.3:68112619-68112638 | None:intergenic | 35.0% | |
| GAAAAAAAGGAAGGAGAAAG+TGG | + | chr3.3:68114620-68114639 | MS.gene044235:intron | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | - | chr3.3:68113410-68113429 | None:intergenic | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | + | chr3.3:68114721-68114740 | MS.gene044235:intron | 35.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | + | chr3.3:68111686-68111705 | MS.gene044235:CDS | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | + | chr3.3:68113891-68113910 | MS.gene044235:intron | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | + | chr3.3:68112708-68112727 | MS.gene044235:CDS | 35.0% | |
| GAGGATTTGGAAAAAAAGGA+AGG | + | chr3.3:68114611-68114630 | MS.gene044235:intron | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | + | chr3.3:68112199-68112218 | MS.gene044235:CDS | 35.0% | |
| GATGTTAGATAAAAGGCTGT+AGG | + | chr3.3:68112874-68112893 | MS.gene044235:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | + | chr3.3:68113465-68113484 | MS.gene044235:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | + | chr3.3:68113486-68113505 | MS.gene044235:intron | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | - | chr3.3:68113723-68113742 | None:intergenic | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | + | chr3.3:68114639-68114658 | MS.gene044235:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | + | chr3.3:68113988-68114007 | MS.gene044235:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | - | chr3.3:68114317-68114336 | None:intergenic | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | + | chr3.3:68114725-68114744 | MS.gene044235:intron | 35.0% | |
| TGAGAAATATGAAATACCGG+AGG | - | chr3.3:68115242-68115261 | None:intergenic | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | - | chr3.3:68114547-68114566 | None:intergenic | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | - | chr3.3:68113630-68113649 | None:intergenic | 35.0% | |
| TTGTTAGGGTAAAGGAATGA+GGG | + | chr3.3:68113327-68113346 | MS.gene044235:intron | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | - | chr3.3:68112961-68112980 | None:intergenic | 35.0% |
| ! | AAACCAGTTTAATGGGTACA+GGG | - | chr3.3:68112960-68112979 | None:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | - | chr3.3:68115207-68115226 | None:intergenic | 35.0% |
| ! | CTAACCCTAATTGGTGATAA+TGG | - | chr3.3:68111896-68111915 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | + | chr3.3:68113171-68113190 | MS.gene044235:intron | 35.0% |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | - | chr3.3:68115206-68115225 | None:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | - | chr3.3:68115211-68115230 | None:intergenic | 35.0% |
| !! | GGAGTAGGTGTTATTCAATT+TGG | + | chr3.3:68112798-68112817 | MS.gene044235:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | + | chr3.3:68112175-68112194 | MS.gene044235:intron | 35.0% |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | + | chr3.3:68112174-68112193 | MS.gene044235:intron | 35.0% |
| AAAACCCTATGGCTAATCTC+TGG | - | chr3.3:68115137-68115156 | None:intergenic | 40.0% | |
| AAACCCTATGGCTAATCTCT+GGG | - | chr3.3:68115136-68115155 | None:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+TGG | + | chr3.3:68114413-68114432 | MS.gene044235:intron | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | + | chr3.3:68115430-68115449 | MS.gene044235:CDS | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | + | chr3.3:68113448-68113467 | MS.gene044235:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | + | chr3.3:68113989-68114008 | MS.gene044235:intron | 40.0% | |
| AATTTGTCCGATCAAAGGTG+AGG | - | chr3.3:68114484-68114503 | None:intergenic | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | + | chr3.3:68113770-68113789 | MS.gene044235:intron | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+GGG | + | chr3.3:68111901-68111920 | MS.gene044235:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | - | chr3.3:68114056-68114075 | None:intergenic | 40.0% | |
| AGGGGAGGATTTGGAAAAAA+AGG | + | chr3.3:68114607-68114626 | MS.gene044235:intron | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | + | chr3.3:68112275-68112294 | MS.gene044235:CDS | 40.0% | |
| ATGGTAGATACACTGCAATG+TGG | + | chr3.3:68113124-68113143 | MS.gene044235:intron | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | + | chr3.3:68113771-68113790 | MS.gene044235:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | + | chr3.3:68115429-68115448 | MS.gene044235:CDS | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | + | chr3.3:68111888-68111907 | MS.gene044235:intron | 40.0% | |
| CTACAATAATGTGCTCAAGG+GGG | + | chr3.3:68112559-68112578 | MS.gene044235:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | + | chr3.3:68114724-68114743 | MS.gene044235:intron | 40.0% | |
| CTTATAAATGGGAGAGGAAC+AGG | - | chr3.3:68113717-68113736 | None:intergenic | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | + | chr3.3:68112231-68112250 | MS.gene044235:CDS | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | + | chr3.3:68114645-68114664 | MS.gene044235:intron | 40.0% | |
| GAGATACTGAACTTAGTAGG+TGG | + | chr3.3:68112080-68112099 | MS.gene044235:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | - | chr3.3:68112663-68112682 | None:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | - | chr3.3:68114968-68114987 | None:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | + | chr3.3:68115338-68115357 | MS.gene044235:intron | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | - | chr3.3:68111875-68111894 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | + | chr3.3:68114718-68114737 | MS.gene044235:intron | 40.0% | |
| GTCAATTTGGGAGATTGAAG+GGG | - | chr3.3:68114966-68114985 | None:intergenic | 40.0% | |
| GTTGTTAGGGTAAAGGAATG+AGG | + | chr3.3:68113326-68113345 | MS.gene044235:intron | 40.0% | |
| TCCTGGATAATCCAAACACA+CGG | - | chr3.3:68115330-68115349 | None:intergenic | 40.0% | |
| TCTCTACAAACTGACAGGTT+CGG | + | chr3.3:68114844-68114863 | MS.gene044235:intron | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | + | chr3.3:68113301-68113320 | MS.gene044235:intron | 40.0% | |
| TGCAAGGATTAGAGAGATTC+TGG | + | chr3.3:68111967-68111986 | MS.gene044235:CDS | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | + | chr3.3:68113664-68113683 | MS.gene044235:intron | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | - | chr3.3:68111876-68111895 | None:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | - | chr3.3:68111743-68111762 | None:intergenic | 40.0% | |
| TTACCCTGTACCCATTAAAC+TGG | + | chr3.3:68112954-68112973 | MS.gene044235:intron | 40.0% | |
| TTCTGGGTAAACTGGTAAAC+TGG | - | chr3.3:68113402-68113421 | None:intergenic | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | + | chr3.3:68115090-68115109 | MS.gene044235:intron | 40.0% |
| ! | AGAGAGATTCTGGAGAATGT+AGG | + | chr3.3:68111977-68111996 | MS.gene044235:CDS | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | + | chr3.3:68111982-68112001 | MS.gene044235:CDS | 40.0% |
| ! | GATTTTGCATTGTAGCTGCA+AGG | + | chr3.3:68111951-68111970 | MS.gene044235:intron | 40.0% |
| ! | TTACATTTTGCCCGTGTGTT+TGG | + | chr3.3:68115316-68115335 | MS.gene044235:intron | 40.0% |
| !! | ACCATGGTTATCGATTTGAC+AGG | + | chr3.3:68113680-68113699 | MS.gene044235:intron | 40.0% |
| !! | AGAGATTAGCCATAGGGTTT+TGG | + | chr3.3:68115136-68115155 | MS.gene044235:CDS | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | + | chr3.3:68113681-68113700 | MS.gene044235:intron | 40.0% |
| !!! | AGAGAGTCAGCTTTTTTTGG+TGG | - | chr3.3:68114887-68114906 | None:intergenic | 40.0% |
| !!! | TTTTGAGTTCCCCTACAGTA+GGG | - | chr3.3:68114711-68114730 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCTACAGT+AGG | - | chr3.3:68114712-68114731 | None:intergenic | 40.0% |
| AACCCTATGGCTAATCTCTG+GGG | - | chr3.3:68115135-68115154 | None:intergenic | 45.0% | |
| AACTCAAAACCCCCTACTGT+AGG | + | chr3.3:68114697-68114716 | MS.gene044235:intron | 45.0% | |
| AAGTTACCAAGACTTGCCTC+CGG | + | chr3.3:68115223-68115242 | MS.gene044235:CDS | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | - | chr3.3:68114963-68114982 | None:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | - | chr3.3:68113780-68113799 | None:intergenic | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | - | chr3.3:68113317-68113336 | None:intergenic | 45.0% | |
| ACCTTGGGATCGATATTCTG+CGG | - | chr3.3:68111860-68111879 | None:intergenic | 45.0% | |
| ACTCAAAACCCCCTACTGTA+GGG | + | chr3.3:68114698-68114717 | MS.gene044235:intron | 45.0% | |
| AGGAAATGTTGTTCAGTGGG+GGG | + | chr3.3:68113990-68114009 | MS.gene044235:intron | 45.0% | |
| AGGAGGGGATTAGAGGAAAA+GGG | - | chr3.3:68114931-68114950 | None:intergenic | 45.0% | |
| ATCGATATTCTGCGGCTTTG+AGG | - | chr3.3:68111852-68111871 | None:intergenic | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | + | chr3.3:68114648-68114667 | MS.gene044235:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | + | chr3.3:68113304-68113323 | MS.gene044235:intron | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | - | chr3.3:68114962-68114981 | None:intergenic | 45.0% | |
| CACCAATTAGGGTTAGGGTT+AGG | + | chr3.3:68111900-68111919 | MS.gene044235:intron | 45.0% | |
| CATGGAGGTTGTTAGGGTAA+AGG | + | chr3.3:68113319-68113338 | MS.gene044235:intron | 45.0% | |
| CATTACGCCTCACCTTTGAT+CGG | + | chr3.3:68114474-68114493 | MS.gene044235:intron | 45.0% | |
| CCAATTAGGGTTAGGGTTAG+GGG | + | chr3.3:68111902-68111921 | MS.gene044235:intron | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | - | chr3.3:68115148-68115167 | None:intergenic | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | - | chr3.3:68113684-68113703 | None:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | - | chr3.3:68115329-68115348 | None:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | - | chr3.3:68111748-68111767 | None:intergenic | 45.0% | |
| CTCTACAAACTGACAGGTTC+GGG | + | chr3.3:68114845-68114864 | MS.gene044235:intron | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | + | chr3.3:68113447-68113466 | MS.gene044235:intron | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | + | chr3.3:68112753-68112772 | MS.gene044235:CDS | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | + | chr3.3:68115428-68115447 | MS.gene044235:CDS | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | - | chr3.3:68111749-68111768 | None:intergenic | 45.0% | |
| GTGTATTCGAATTCGGGAAC+GGG | - | chr3.3:68111742-68111761 | None:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | - | chr3.3:68113942-68113961 | None:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | - | chr3.3:68113318-68113337 | None:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | + | chr3.3:68111664-68111683 | MS.gene044235:CDS | 45.0% | |
| TCCAAAACCTTCGAAGTTGC+AGG | + | chr3.3:68111712-68111731 | MS.gene044235:CDS | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | + | chr3.3:68113313-68113332 | MS.gene044235:intron | 45.0% | |
| TCTACAAACTGACAGGTTCG+GGG | + | chr3.3:68114846-68114865 | MS.gene044235:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | + | chr3.3:68113312-68113331 | MS.gene044235:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | + | chr3.3:68114649-68114668 | MS.gene044235:intron | 45.0% | |
| TTGAGAGCGACGCGAAAAAT+GGG | + | chr3.3:68112840-68112859 | MS.gene044235:intron | 45.0% | |
| TTTGAGAGCGACGCGAAAAA+TGG | + | chr3.3:68112839-68112858 | MS.gene044235:intron | 45.0% | |
| ! | AATGTACTGGAGGAGGGTTT+TGG | + | chr3.3:68114731-68114750 | MS.gene044235:intron | 45.0% |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | - | chr3.3:68111716-68111735 | None:intergenic | 45.0% |
| ! | ATACCCCAGAGATTAGCCAT+AGG | + | chr3.3:68115129-68115148 | MS.gene044235:CDS | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | + | chr3.3:68114732-68114751 | MS.gene044235:intron | 45.0% |
| ! | CTTTGGAGAGAGTAACGAGA+TGG | - | chr3.3:68111789-68111808 | None:intergenic | 45.0% |
| ! | GCTGATTCCAGAAACTTCTG+TGG | - | chr3.3:68111674-68111693 | None:intergenic | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | + | chr3.3:68115130-68115149 | MS.gene044235:CDS | 45.0% |
| ! | TTTGAGTTCCCCTACAGTAG+GGG | - | chr3.3:68114710-68114729 | None:intergenic | 45.0% |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | + | chr3.3:68112783-68112802 | MS.gene044235:intron | 45.0% |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | + | chr3.3:68115145-68115164 | MS.gene044235:CDS | 45.0% |
| !!! | GAGTCAGCTTTTTTTGGTGG+TGG | - | chr3.3:68114884-68114903 | None:intergenic | 45.0% |
| AGATGAAGTAGCTCCGTGTG+AGG | + | chr3.3:68112669-68112688 | MS.gene044235:CDS | 50.0% | |
| CCCCTAACCCTAACCCTAAT+TGG | - | chr3.3:68111905-68111924 | None:intergenic | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | + | chr3.3:68115326-68115345 | MS.gene044235:intron | 50.0% | |
| CTCAAAACCCCCTACTGTAG+GGG | + | chr3.3:68114699-68114718 | MS.gene044235:intron | 50.0% | |
| CTGTGGAGACTGATGCTTCT+TGG | - | chr3.3:68111657-68111676 | None:intergenic | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | - | chr3.3:68112685-68112704 | None:intergenic | 50.0% | |
| GAAATACCGGAGGCAAGTCT+TGG | - | chr3.3:68115232-68115251 | None:intergenic | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | - | chr3.3:68113781-68113800 | None:intergenic | 50.0% | |
| GAGGAGGGGATTAGAGGAAA+AGG | - | chr3.3:68114932-68114951 | None:intergenic | 50.0% | |
| GGAGACTGATGCTTCTTGGT+CGG | - | chr3.3:68111653-68111672 | None:intergenic | 50.0% | |
| GGAGAGTTTACCGTCCAATG+TGG | + | chr3.3:68112009-68112028 | MS.gene044235:CDS | 50.0% | |
| GGGTTTACCTGCAACTTCGA+AGG | - | chr3.3:68111722-68111741 | None:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | - | chr3.3:68113943-68113962 | None:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | + | chr3.3:68112686-68112705 | MS.gene044235:CDS | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | + | chr3.3:68112645-68112664 | MS.gene044235:intron | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | + | chr3.3:68115160-68115179 | MS.gene044235:CDS | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | + | chr3.3:68115156-68115175 | MS.gene044235:CDS | 50.0% | |
| TTAGGGTCTGTTCGGGAGAT+TGG | + | chr3.3:68114579-68114598 | MS.gene044235:intron | 50.0% | |
| TTAGGGTTAGGGTTAGGGGT+TGG | + | chr3.3:68111906-68111925 | MS.gene044235:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | - | chr3.3:68115400-68115419 | None:intergenic | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | + | chr3.3:68112204-68112223 | MS.gene044235:CDS | 50.0% | |
| TTGAGTTCCCCTACAGTAGG+GGG | - | chr3.3:68114709-68114728 | None:intergenic | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | - | chr3.3:68114961-68114980 | None:intergenic | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | + | chr3.3:68111988-68112007 | MS.gene044235:CDS | 50.0% |
| !!! | AGCTTTTTTTGGTGGTGGCC+GGG | - | chr3.3:68114879-68114898 | None:intergenic | 50.0% |
| !!! | CAGCTTTTTTTGGTGGTGGC+CGG | - | chr3.3:68114880-68114899 | None:intergenic | 50.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | - | chr3.3:68114938-68114957 | None:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | + | chr3.3:68112018-68112037 | MS.gene044235:CDS | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | + | chr3.3:68112215-68112234 | MS.gene044235:CDS | 55.0% | |
| AGCATAGGAAGGAGCTGGAG+AGG | + | chr3.3:68115171-68115190 | MS.gene044235:CDS | 55.0% | |
| ATCACGAGCTACGAGACGAG+CGG | - | chr3.3:68111824-68111843 | None:intergenic | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | + | chr3.3:68112207-68112226 | MS.gene044235:CDS | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | + | chr3.3:68112216-68112235 | MS.gene044235:CDS | 55.0% | |
| GCCGCAGAATATCGATCCCA+AGG | + | chr3.3:68111856-68111875 | MS.gene044235:CDS | 55.0% | |
| GGTCTGTTCGGGAGATTGGA+GGG | + | chr3.3:68114583-68114602 | MS.gene044235:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | + | chr3.3:68114584-68114603 | MS.gene044235:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+CGG | + | chr3.3:68114657-68114676 | MS.gene044235:intron | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | - | chr3.3:68111766-68111785 | None:intergenic | 55.0% | |
| TGTTCAGTGGGGGGATTGCA+AGG | + | chr3.3:68113999-68114018 | MS.gene044235:intron | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | - | chr3.3:68112221-68112240 | None:intergenic | 55.0% |
| ! | AGCGGCTTCGTCTTTGGCTT+TGG | - | chr3.3:68111806-68111825 | None:intergenic | 55.0% |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | - | chr3.3:68115347-68115366 | None:intergenic | 55.0% |
| ! | CAAGGGGGACAGAGAGCTTT+TGG | + | chr3.3:68112574-68112593 | MS.gene044235:intron | 55.0% |
| !! | TCTCTGGGGTATAGCCCACA+CGG | - | chr3.3:68115121-68115140 | None:intergenic | 55.0% |
| !!! | GCTTTTTTTGGTGGTGGCCG+GGG | - | chr3.3:68114878-68114897 | None:intergenic | 55.0% |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | + | chr3.3:68114735-68114754 | MS.gene044235:intron | 55.0% |
| AGCTCCGTGTGAGGCTCAGA+TGG | + | chr3.3:68112678-68112697 | MS.gene044235:CDS | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | + | chr3.3:68115104-68115123 | MS.gene044235:intron | 60.0% | |
| CTGGGAGAGGAGGGCTTTAC+GGG | + | chr3.3:68114658-68114677 | MS.gene044235:intron | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | - | chr3.3:68111812-68111831 | None:intergenic | 60.0% | |
| GAGATTGAAGGGGAGGGGAC+AGG | - | chr3.3:68114956-68114975 | None:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | - | chr3.3:68112022-68112041 | None:intergenic | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | + | chr3.3:68115166-68115185 | MS.gene044235:CDS | 60.0% | |
| GGGTCTGTTCGGGAGATTGG+AGG | + | chr3.3:68114582-68114601 | MS.gene044235:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | + | chr3.3:68114588-68114607 | MS.gene044235:intron | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | + | chr3.3:68114587-68114606 | MS.gene044235:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | + | chr3.3:68114589-68114608 | MS.gene044235:intron | 60.0% | |
| TTGGAGGGGAGGGGAGGATT+TGG | + | chr3.3:68114598-68114617 | MS.gene044235:intron | 60.0% | |
| CAGGTTCGGGGTTCGAACCC+CGG | + | chr3.3:68114858-68114877 | MS.gene044235:intron | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | + | chr3.3:68115103-68115122 | MS.gene044235:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | - | chr3.3:68114951-68114970 | None:intergenic | 65.0% | |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | + | chr3.3:68112024-68112043 | MS.gene044235:CDS | 65.0% |
| ! | CTGCGCCGACGCAACCACAT+TGG | - | chr3.3:68112026-68112045 | None:intergenic | 65.0% |
| AGGGGAGGGGACAGGAGAGG+AGG | - | chr3.3:68114948-68114967 | None:intergenic | 70.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | + | chr3.3:68114592-68114611 | MS.gene044235:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | - | chr3.3:68114946-68114965 | None:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | - | chr3.3:68114947-68114966 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 68111646 | 68115455 | 68111646 | ID=MS.gene044235 |
| chr3.3 | mRNA | 68111646 | 68115455 | 68111646 | ID=MS.gene044235.t1;Parent=MS.gene044235 |
| chr3.3 | exon | 68111646 | 68111877 | 68111646 | ID=MS.gene044235.t1.exon1;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68111646 | 68111877 | 68111646 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| chr3.3 | exon | 68111966 | 68112098 | 68111966 | ID=MS.gene044235.t1.exon2;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68111966 | 68112098 | 68111966 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| chr3.3 | exon | 68112180 | 68112314 | 68112180 | ID=MS.gene044235.t1.exon3;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68112180 | 68112314 | 68112180 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| chr3.3 | exon | 68112651 | 68112774 | 68112651 | ID=MS.gene044235.t1.exon4;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68112651 | 68112774 | 68112651 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| chr3.3 | exon | 68115107 | 68115244 | 68115107 | ID=MS.gene044235.t1.exon5;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68115107 | 68115244 | 68115107 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| chr3.3 | exon | 68115348 | 68115455 | 68115348 | ID=MS.gene044235.t1.exon6;Parent=MS.gene044235.t1 |
| chr3.3 | CDS | 68115348 | 68115455 | 68115348 | ID=cds.MS.gene044235.t1;Parent=MS.gene044235.t1 |
| Gene Sequence |
| Protein sequence |
