Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047006.t1 | XP_003631124.2 | 98 | 494 | 9 | 1 | 1 | 493 | 1 | 494 | 2.00E-284 | 987.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047006.t1 | Q9M571 | 72.7 | 494 | 134 | 1 | 1 | 493 | 1 | 494 | 1.2e-221 | 770.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047006.t1 | G7LE68 | 98.0 | 494 | 9 | 1 | 1 | 493 | 1 | 494 | 1.5e-284 | 987.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047043 | MS.gene047006 | PPI |
MS.gene047006 | MS.gene82097 | PPI |
MS.gene93748 | MS.gene047006 | PPI |
MS.gene047006 | MS.gene042859 | PPI |
MS.gene047006 | MS.gene040109 | PPI |
MS.gene047006 | MS.gene066974 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047006.t1 | MTR_8g107370 | 97.976 | 494 | 9 | 1 | 1 | 493 | 1 | 494 | 0.0 | 1001 |
MS.gene047006.t1 | MTR_8g107370 | 98.156 | 488 | 9 | 0 | 6 | 493 | 1 | 488 | 0.0 | 994 |
MS.gene047006.t1 | MTR_8g107370 | 98.052 | 462 | 8 | 1 | 1 | 461 | 1 | 462 | 0.0 | 937 |
MS.gene047006.t1 | MTR_8g107370 | 95.991 | 449 | 17 | 1 | 1 | 448 | 1 | 449 | 0.0 | 864 |
MS.gene047006.t1 | MTR_6g069600 | 80.785 | 484 | 92 | 1 | 10 | 492 | 13 | 496 | 0.0 | 824 |
MS.gene047006.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 277 | 431 | 43 | 206 | 7.30e-14 | 72.8 |
MS.gene047006.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 277 | 431 | 86 | 249 | 1.18e-13 | 72.4 |
MS.gene047006.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 287 | 399 | 75 | 189 | 1.88e-11 | 65.5 |
MS.gene047006.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 287 | 399 | 130 | 244 | 2.12e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047006.t1 | AT1G48600 | 72.008 | 493 | 134 | 2 | 1 | 492 | 1 | 490 | 0.0 | 756 |
MS.gene047006.t1 | AT3G18000 | 71.694 | 484 | 136 | 1 | 10 | 492 | 7 | 490 | 0.0 | 753 |
MS.gene047006.t1 | AT1G73600 | 70.994 | 493 | 140 | 2 | 3 | 492 | 11 | 503 | 0.0 | 753 |
MS.gene047006.t1 | AT1G73600 | 71.400 | 493 | 136 | 2 | 1 | 492 | 1 | 489 | 0.0 | 751 |
MS.gene047006.t1 | AT1G48600 | 72.574 | 474 | 129 | 1 | 20 | 492 | 1 | 474 | 0.0 | 736 |
MS.gene047006.t1 | AT5G13710 | 32.927 | 164 | 101 | 4 | 277 | 431 | 86 | 249 | 1.19e-14 | 75.5 |
MS.gene047006.t1 | AT5G13710 | 32.927 | 164 | 101 | 4 | 277 | 431 | 86 | 249 | 1.19e-14 | 75.5 |
MS.gene047006.t1 | AT1G64970 | 28.846 | 104 | 72 | 1 | 289 | 390 | 130 | 233 | 1.61e-11 | 66.2 |
Find 108 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCACGGGAAATCACATTTA+TGG | 0.261865 | 4.3:+206026 | None:intergenic |
CAACTCTATCTAAGAACTTC+TGG | 0.266070 | 4.3:+207236 | None:intergenic |
TCCTTTGAGCTTTCTCTTGT+GGG | 0.273120 | 4.3:-207455 | MS.gene047006:CDS |
ACAAACCTTTGTGTAAAATC+TGG | 0.284632 | 4.3:+207981 | None:intergenic |
GTGAACGAGGGGAGCAGAAG+TGG | 0.305672 | 4.3:-203667 | MS.gene047006:CDS |
GATGGAAGGCGAAGCAGATC+AGG | 0.322790 | 4.3:-203691 | MS.gene047006:CDS |
CCTTCAGAAACATCCATCTT+TGG | 0.322834 | 4.3:+208771 | None:intergenic |
GAATCCTGTTTCCACCAATC+TGG | 0.329775 | 4.3:-208045 | MS.gene047006:CDS |
CACTGATGAAGTCGTCCTTC+TGG | 0.335719 | 4.3:+203842 | None:intergenic |
CTTGTCGAGATCAGAAGCTT+TGG | 0.356843 | 4.3:+209807 | None:intergenic |
TGGTGCAGATTTGCTGGATA+TGG | 0.363415 | 4.3:-207291 | MS.gene047006:intron |
AGGTTAGATCACATGATGAT+AGG | 0.371337 | 4.3:-207264 | MS.gene047006:CDS |
TGGAAGATTTACCGGAGAAT+TGG | 0.371460 | 4.3:-209034 | MS.gene047006:CDS |
GCCGGTATTGGAAGATTTAC+CGG | 0.377974 | 4.3:-209042 | MS.gene047006:CDS |
TTCCTTCATATTCTGGTAGC+AGG | 0.383460 | 4.3:+209085 | None:intergenic |
GCTGAAAGCTGGTCAATTGC+TGG | 0.390425 | 4.3:-209010 | MS.gene047006:CDS |
ATCCCCAGATTGGTGGAAAC+AGG | 0.392051 | 4.3:+208041 | None:intergenic |
CTGTAGAACGAAAGCATTAA+CGG | 0.397285 | 4.3:-208837 | MS.gene047006:intron |
TTCCTTTGAGCTTTCTCTTG+TGG | 0.410639 | 4.3:-207456 | MS.gene047006:CDS |
TGTTGAGGATCGAACTGATC+AGG | 0.414212 | 4.3:-204000 | MS.gene047006:intron |
TTTATTAGCACTGGAGGACT+TGG | 0.419528 | 4.3:-207163 | MS.gene047006:intron |
ATTGAGCTTGGAGCCGGTAT+TGG | 0.420522 | 4.3:-209054 | MS.gene047006:CDS |
GGAAAATCAGTTATTGAGCT+TGG | 0.426730 | 4.3:-209066 | MS.gene047006:CDS |
TTACGATATGAGCGCGTGTA+TGG | 0.432033 | 4.3:-207193 | MS.gene047006:CDS |
GCTTGTATTCTTTCATGTCA+TGG | 0.435700 | 4.3:+204159 | None:intergenic |
CTGGATGTTGGTTGTGGTGT+TGG | 0.442233 | 4.3:-206108 | MS.gene047006:CDS |
GGTTAGATCACATGATGATA+GGG | 0.442687 | 4.3:-207263 | MS.gene047006:CDS |
GTGAAATTCAGAAATCATAC+TGG | 0.443496 | 4.3:-209876 | MS.gene047006:CDS |
GTTGGTTGTGGTGTTGGCGG+AGG | 0.443753 | 4.3:-206102 | MS.gene047006:CDS |
TTCTCTTTGAATCCCCAGAT+TGG | 0.446538 | 4.3:+208031 | None:intergenic |
TGCCATATGAGTGATATCTC+TGG | 0.446888 | 4.3:-207482 | MS.gene047006:CDS |
GGCCAAGGCTTTATTAGCAC+TGG | 0.447921 | 4.3:-207172 | MS.gene047006:CDS |
CTGCAGATGCTGGAGAATGC+TGG | 0.456311 | 4.3:-204035 | MS.gene047006:intron |
AATCCTGTTTCCACCAATCT+GGG | 0.456764 | 4.3:-208044 | MS.gene047006:CDS |
TCCCAGAGATATCACTCATA+TGG | 0.459147 | 4.3:+207480 | None:intergenic |
CAAACCTTTGTGTAAAATCT+GGG | 0.462103 | 4.3:+207982 | None:intergenic |
AGCTTTCAGCGCCAATTCTC+CGG | 0.462761 | 4.3:+209023 | None:intergenic |
CATTCTTCCATGGCTTCACC+AGG | 0.473107 | 4.3:-210002 | None:intergenic |
GGAGAATTGGCGCTGAAAGC+TGG | 0.475774 | 4.3:-209021 | MS.gene047006:CDS |
ATTGGTGGAAACAGGATTCT+CGG | 0.477277 | 4.3:+208049 | None:intergenic |
TGAACGAGGGGAGCAGAAGT+GGG | 0.479207 | 4.3:-203666 | MS.gene047006:CDS |
AGCTGGTCAATTGCTGGCTG+TGG | 0.479823 | 4.3:-209004 | MS.gene047006:CDS |
ACGAGTGTAGATTACATCAT+AGG | 0.479962 | 4.3:+205924 | None:intergenic |
CGTGCTATTGAACGTGCTAT+CGG | 0.481806 | 4.3:-206009 | MS.gene047006:CDS |
GTAATTAGAAGTTGACCTCC+AGG | 0.482434 | 4.3:+204254 | None:intergenic |
ATTACAATCCTACTCACTAC+AGG | 0.482810 | 4.3:-208008 | MS.gene047006:CDS |
GTTTGTGAAAACACTGCAGC+AGG | 0.484254 | 4.3:-203884 | MS.gene047006:CDS |
TAAAATGATCTAAATAATGT+TGG | 0.485432 | 4.3:+204290 | None:intergenic |
CTTGTGGGCTGTAAATGCAT+TGG | 0.492972 | 4.3:-207440 | MS.gene047006:CDS |
AAAGCCTGGTCAGAAAGTAC+TGG | 0.495881 | 4.3:-206127 | MS.gene047006:CDS |
AAAGGAACTTGTAGCTAAGC+TGG | 0.495920 | 4.3:-206154 | MS.gene047006:CDS |
CTCCAGTGCTAATAAAGCCT+TGG | 0.496405 | 4.3:+207170 | None:intergenic |
TCCGGTAAATCTTCCAATAC+CGG | 0.497820 | 4.3:+209041 | None:intergenic |
TCTTTGAATCCCCAGATTGG+TGG | 0.498788 | 4.3:+208034 | None:intergenic |
ATTACATCATAGGTCTTCTC+AGG | 0.499504 | 4.3:+205934 | None:intergenic |
TATTCAGCAAATTCTGAAGA+TGG | 0.499970 | 4.3:+204206 | None:intergenic |
CCTTACTTTGATGTATAGCA+TGG | 0.513489 | 4.3:+205897 | None:intergenic |
GATGTTGGTTGTGGTGTTGG+CGG | 0.516899 | 4.3:-206105 | MS.gene047006:CDS |
TCAGTTATTGAGCTTGGAGC+CGG | 0.519308 | 4.3:-209060 | MS.gene047006:CDS |
ACTGATTACTGCAAAAGTGC+TGG | 0.520458 | 4.3:-204233 | MS.gene047006:CDS |
ACAATGAAATTGTGGAGAGA+TGG | 0.523489 | 4.3:-203709 | MS.gene047006:CDS |
AGAATTTGCTGAATACATCA+AGG | 0.524867 | 4.3:-204198 | MS.gene047006:CDS |
GATTTGCTGGATATGGCAAA+AGG | 0.528860 | 4.3:-207284 | MS.gene047006:CDS |
GATGTATCTTTCAGATAATG+AGG | 0.530422 | 4.3:-208715 | MS.gene047006:intron |
CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 4.3:-208977 | MS.gene047006:intron |
TCCTTCATATTCTGGTAGCA+GGG | 0.535206 | 4.3:+209086 | None:intergenic |
GCCATATGAGTGATATCTCT+GGG | 0.536166 | 4.3:-207481 | MS.gene047006:CDS |
CATAATACCTGGTGAAGCCA+TGG | 0.538535 | 4.3:+209995 | None:intergenic |
TGATGTCACCTCTCCAAAGA+TGG | 0.540164 | 4.3:-208784 | MS.gene047006:CDS |
AAGCAGATCAGGGGTGAACG+AGG | 0.552850 | 4.3:-203680 | MS.gene047006:CDS |
ATGGAAGGCGAAGCAGATCA+GGG | 0.557359 | 4.3:-203690 | MS.gene047006:CDS |
TATGAGCGCGTGTATGGCCA+AGG | 0.560692 | 4.3:-207187 | MS.gene047006:CDS |
GCTAAGCTGGAACTAAAGCC+TGG | 0.561514 | 4.3:-206141 | MS.gene047006:CDS |
TGGCGGAGGTGATTTCTACA+TGG | 0.570395 | 4.3:-206088 | MS.gene047006:CDS |
CCAAAGATGGATGTTTCTGA+AGG | 0.571313 | 4.3:-208771 | MS.gene047006:CDS |
ATGAAATGGTTGAAAGATGG+TGG | 0.574449 | 4.3:-208084 | MS.gene047006:CDS |
CTGGGTTCCCTGTAGTGAGT+AGG | 0.586374 | 4.3:+208000 | None:intergenic |
TGGATTTGATGTCATTGTTG+AGG | 0.596748 | 4.3:-204015 | MS.gene047006:CDS |
GATAGCACGTTCAATAGCAC+GGG | 0.597140 | 4.3:+206011 | None:intergenic |
ATGATGAAATGGTTGAAAGA+TGG | 0.599340 | 4.3:-208087 | MS.gene047006:CDS |
ACATCCAGTACTTTCTGACC+AGG | 0.599476 | 4.3:+206123 | None:intergenic |
GAACGAGGGGAGCAGAAGTG+GGG | 0.600599 | 4.3:-203665 | MS.gene047006:CDS |
GGATGACTACAATGAAATTG+TGG | 0.600685 | 4.3:-203717 | MS.gene047006:CDS |
CGATAGCACGTTCAATAGCA+CGG | 0.601134 | 4.3:+206010 | None:intergenic |
AGAAACATCCATCTTTGGAG+AGG | 0.608120 | 4.3:+208776 | None:intergenic |
GCAGATCAGGGGTGAACGAG+GGG | 0.609433 | 4.3:-203678 | MS.gene047006:CDS |
TTTGCTGAATACATCAAGGA+AGG | 0.610174 | 4.3:-204194 | MS.gene047006:CDS |
AGCAGATCAGGGGTGAACGA+GGG | 0.610403 | 4.3:-203679 | MS.gene047006:CDS |
CAAGGCTTTATTAGCACTGG+AGG | 0.615635 | 4.3:-207169 | MS.gene047006:CDS |
CAAAGCTTCTGATCTCGACA+AGG | 0.622617 | 4.3:-209806 | MS.gene047006:CDS |
AAATAAGAAGAATCAAAACC+AGG | 0.627133 | 4.3:-207405 | MS.gene047006:intron |
GGTCAGAAAGTACTGGATGT+TGG | 0.630821 | 4.3:-206120 | MS.gene047006:CDS |
ATCCTGTTTCCACCAATCTG+GGG | 0.633940 | 4.3:-208043 | MS.gene047006:CDS |
TGAAATTGTGGAGAGATGGA+AGG | 0.635643 | 4.3:-203705 | MS.gene047006:CDS |
GTTAGATCACATGATGATAG+GGG | 0.637701 | 4.3:-207262 | MS.gene047006:CDS |
TTGTGCTGATCTCTCTGTCG+AGG | 0.638294 | 4.3:-209845 | MS.gene047006:CDS |
TGACATGAAAGAATACAAGC+AGG | 0.639443 | 4.3:-204156 | MS.gene047006:intron |
TACAAGTGGTTGAAACCTGG+AGG | 0.640796 | 4.3:-204269 | MS.gene047006:CDS |
AATTGCTCTCGAGAGCCAGA+AGG | 0.643480 | 4.3:-203857 | MS.gene047006:CDS |
AAAGTACTGGATGTTGGTTG+TGG | 0.647499 | 4.3:-206114 | MS.gene047006:CDS |
TCCCTGCTACCAGAATATGA+AGG | 0.647755 | 4.3:-209087 | MS.gene047006:CDS |
GCTGAATACATCAAGGAAGG+AGG | 0.652193 | 4.3:-204191 | MS.gene047006:CDS |
GCCCACAAGAGAAAGCTCAA+AGG | 0.655286 | 4.3:+207454 | None:intergenic |
TTCTTGGGCAGAAACGACAA+AGG | 0.658742 | 4.3:-206172 | MS.gene047006:intron |
TTACAATCCTACTCACTACA+GGG | 0.660434 | 4.3:-208007 | MS.gene047006:CDS |
GGGAAATCACATTTATGGAG+AGG | 0.665644 | 4.3:+206031 | None:intergenic |
TGGAAGGCGAAGCAGATCAG+GGG | 0.665972 | 4.3:-203689 | MS.gene047006:CDS |
CGACAAGGAAGAAAGACCTG+AGG | 0.732813 | 4.3:-209791 | MS.gene047006:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTTAAAACATATTGAT+TGG | - | chr4.3:207021-207040 | MS.gene047006:intron | 10.0% |
!!! | AAGAATTATTTTCATTTTAT+AGG | - | chr4.3:204029-204048 | MS.gene047006:CDS | 10.0% |
!!! | AATTAATAATTACTTTTAGA+TGG | - | chr4.3:208470-208489 | MS.gene047006:intron | 10.0% |
!!! | AGAATTATTTTCATTTTATA+GGG | - | chr4.3:204030-204049 | MS.gene047006:CDS | 10.0% |
!!! | ATTATCATTACATTTTATTT+TGG | - | chr4.3:206760-206779 | MS.gene047006:intron | 10.0% |
!! | AAAACAAAATGAAATGAAAA+AGG | + | chr4.3:204450-204469 | None:intergenic | 15.0% |
!! | GTAAATAAAAAAATCAACTT+TGG | - | chr4.3:205089-205108 | MS.gene047006:intron | 15.0% |
!! | TAAAATGATCTAAATAATGT+TGG | + | chr4.3:209346-209365 | None:intergenic | 15.0% |
!! | TAAATTAAAACCAAATGAAT+CGG | + | chr4.3:204171-204190 | None:intergenic | 15.0% |
!! | TTTGTTTAATCTCAATTATT+GGG | - | chr4.3:205241-205260 | MS.gene047006:intron | 15.0% |
!!! | AATCAAAGCTTTTAAATTAA+GGG | + | chr4.3:209889-209908 | None:intergenic | 15.0% |
!!! | CTTTTGTAATACTTTATTTT+AGG | - | chr4.3:209854-209873 | MS.gene047006:CDS | 15.0% |
!!! | GTTTTTTTTTCTTTTCAATT+CGG | - | chr4.3:204986-205005 | MS.gene047006:intron | 15.0% |
!!! | TTTTGTTTAATCTCAATTAT+TGG | - | chr4.3:205240-205259 | MS.gene047006:intron | 15.0% |
!!! | TTTTTAATCAAACAATAATC+TGG | + | chr4.3:205710-205729 | None:intergenic | 15.0% |
!!! | TTTTTTATGAGTGAATAAAA+AGG | - | chr4.3:208367-208386 | MS.gene047006:intron | 15.0% |
!! | AAAAAAGAAAAAACCAAGTA+TGG | + | chr4.3:207356-207375 | None:intergenic | 20.0% |
!! | AAAATAATTCTTAACATCCA+CGG | + | chr4.3:204021-204040 | None:intergenic | 20.0% |
!! | AATAACATTTACGAGTAATA+AGG | + | chr4.3:209087-209106 | None:intergenic | 20.0% |
!! | AATGAAAAGGTAGAAAATAT+TGG | + | chr4.3:206709-206728 | None:intergenic | 20.0% |
!! | AATTATTATGTAATTGTACC+TGG | - | chr4.3:206883-206902 | MS.gene047006:intron | 20.0% |
!! | ACTAGAATAATTATTTGCAA+TGG | + | chr4.3:205209-205228 | None:intergenic | 20.0% |
!! | TCATTATTATTACGACATTA+AGG | + | chr4.3:203696-203715 | None:intergenic | 20.0% |
!! | TTAACATGTTCTTAAATTCA+CGG | + | chr4.3:205153-205172 | None:intergenic | 20.0% |
!! | TTGTTTAATCTCAATTATTG+GGG | - | chr4.3:205242-205261 | MS.gene047006:intron | 20.0% |
!!! | AGCTGTTTTATTTAATCAAA+AGG | + | chr4.3:205793-205812 | None:intergenic | 20.0% |
!!! | ATAATTTTACTCAAACAAAC+TGG | - | chr4.3:204369-204388 | MS.gene047006:intron | 20.0% |
!!! | ATTTTGATCAATCATTTTGT+TGG | - | chr4.3:209186-209205 | MS.gene047006:intron | 20.0% |
!!! | ATTTTGATTAGACTATGAAT+TGG | + | chr4.3:204317-204336 | None:intergenic | 20.0% |
!!! | CAAATTTTATGGAAATATGT+GGG | + | chr4.3:204407-204426 | None:intergenic | 20.0% |
!!! | CAATCAAAGCTTTTAAATTA+AGG | + | chr4.3:209890-209909 | None:intergenic | 20.0% |
!!! | TATTTAGATCATTTTACAAG+TGG | - | chr4.3:209350-209369 | MS.gene047006:intron | 20.0% |
!!! | TCATATAATTTTTTAGAGCA+TGG | - | chr4.3:207200-207219 | MS.gene047006:CDS | 20.0% |
!!! | TCATTGGATTATATTTTGTA+AGG | - | chr4.3:206017-206036 | MS.gene047006:CDS | 20.0% |
!!! | TGTGTACAATAATATTTTCA+TGG | - | chr4.3:206322-206341 | MS.gene047006:intron | 20.0% |
! | AAAAAGATTGACATCAACTT+TGG | - | chr4.3:205727-205746 | MS.gene047006:intron | 25.0% |
! | AAAAGATTGACATCAACTTT+GGG | - | chr4.3:205728-205747 | MS.gene047006:intron | 25.0% |
! | AAATAAGAAGAATCAAAACC+AGG | - | chr4.3:206228-206247 | MS.gene047006:intron | 25.0% |
! | AAATAATTCTTAACATCCAC+GGG | + | chr4.3:204020-204039 | None:intergenic | 25.0% |
! | AACAATAACAATTCTCAGAA+TGG | + | chr4.3:204698-204717 | None:intergenic | 25.0% |
! | AATTACTTACTTCTCTTCTT+TGG | - | chr4.3:208139-208158 | MS.gene047006:intron | 25.0% |
! | ACATGTTTGAACCTAATTAA+CGG | - | chr4.3:205818-205837 | MS.gene047006:intron | 25.0% |
! | AGCTTAAGATGATAATATGA+TGG | + | chr4.3:203967-203986 | None:intergenic | 25.0% |
! | AGTGTATGATTTCTATCTTA+TGG | - | chr4.3:205759-205778 | MS.gene047006:intron | 25.0% |
! | ATTAAGAAATGTGAAAGATG+AGG | + | chr4.3:203875-203894 | None:intergenic | 25.0% |
! | CAAATTATAAGTGTATAGTG+TGG | + | chr4.3:205424-205443 | None:intergenic | 25.0% |
! | CACAAACAAATATATCCATT+TGG | - | chr4.3:207233-207252 | MS.gene047006:CDS | 25.0% |
! | CACACTATACACTTATAATT+TGG | - | chr4.3:205422-205441 | MS.gene047006:intron | 25.0% |
! | CATTACACGATAATTATAAG+AGG | + | chr4.3:206843-206862 | None:intergenic | 25.0% |
! | GAATGTTTGACAGATTAAAA+AGG | + | chr4.3:208697-208716 | None:intergenic | 25.0% |
! | GATATTGCAAAGAGAAAATT+AGG | + | chr4.3:204263-204282 | None:intergenic | 25.0% |
! | GGTATGATATATCAGATTAA+TGG | + | chr4.3:204129-204148 | None:intergenic | 25.0% |
! | TAAAAGAATACCTAAACTCT+AGG | - | chr4.3:209033-209052 | MS.gene047006:CDS | 25.0% |
! | TAAGAGGAAGAATAATCAAA+TGG | + | chr4.3:206827-206846 | None:intergenic | 25.0% |
! | TACAAAGTACAGACATAAAA+AGG | + | chr4.3:209223-209242 | None:intergenic | 25.0% |
! | TAGCAAAAAGAATGATGAAA+TGG | - | chr4.3:205535-205554 | MS.gene047006:intron | 25.0% |
! | TTAACAAAACATGACTTAGT+TGG | - | chr4.3:205461-205480 | MS.gene047006:intron | 25.0% |
! | TTATGAGTTGCTTAATTCTT+GGG | - | chr4.3:207446-207465 | MS.gene047006:CDS | 25.0% |
! | TTGCAAGCAAATTAAACTAT+TGG | - | chr4.3:209125-209144 | MS.gene047006:intron | 25.0% |
! | TTGTACTAAATAGCATATTG+CGG | - | chr4.3:205372-205391 | MS.gene047006:intron | 25.0% |
!! | AATAACTTCATTGTTACTTG+TGG | - | chr4.3:209720-209739 | MS.gene047006:intron | 25.0% |
!! | GCAAATTTTATGGAAATATG+TGG | + | chr4.3:204408-204427 | None:intergenic | 25.0% |
!! | TCATCTCTTATTTAAGTTCA+AGG | - | chr4.3:208547-208566 | MS.gene047006:intron | 25.0% |
!! | TCGTAAATGTTATTCCTTTT+CGG | - | chr4.3:209093-209112 | MS.gene047006:CDS | 25.0% |
!! | TCTAACATGTTAATTTGAAG+CGG | + | chr4.3:206519-206538 | None:intergenic | 25.0% |
!! | TTGATGTGATTTTCTCAAAT+TGG | - | chr4.3:204890-204909 | MS.gene047006:intron | 25.0% |
!! | TTTTCTACCTTTTCATTCTT+TGG | - | chr4.3:206712-206731 | MS.gene047006:intron | 25.0% |
!!! | ACATACAAGGTTCTAAATAA+CGG | + | chr4.3:208944-208963 | None:intergenic | 25.0% |
!!! | CTTTTCAATTTTCAAGCTAT+TGG | - | chr4.3:206980-206999 | MS.gene047006:intron | 25.0% |
!!! | TAAAAAGGTTTGTTATCACT+TGG | - | chr4.3:208382-208401 | MS.gene047006:intron | 25.0% |
!!! | TAAAAGCTTTGATTGTTTTC+AGG | - | chr4.3:209895-209914 | MS.gene047006:CDS | 25.0% |
AAAAGAACTTAACCTTGATC+AGG | + | chr4.3:207398-207417 | None:intergenic | 30.0% | |
AAACTTCCACACTTATACTT+TGG | - | chr4.3:204234-204253 | MS.gene047006:CDS | 30.0% | |
AAAGAGAATGAACAGAGAAA+CGG | + | chr4.3:208308-208327 | None:intergenic | 30.0% | |
AAAGAGAGTAAGACAACAAA+CGG | + | chr4.3:209504-209523 | None:intergenic | 30.0% | |
AACATTTACGAGTAATAAGG+TGG | + | chr4.3:209084-209103 | None:intergenic | 30.0% | |
AACGAACAAGAAGCAAAAAA+CGG | + | chr4.3:208278-208297 | None:intergenic | 30.0% | |
ACAAACCTTTGTGTAAAATC+TGG | + | chr4.3:205655-205674 | None:intergenic | 30.0% | |
ACATGTATACATCAGTCAAT+TGG | + | chr4.3:206305-206324 | None:intergenic | 30.0% | |
AGTAATTTGAACAGGAGAAA+AGG | - | chr4.3:208040-208059 | MS.gene047006:CDS | 30.0% | |
ATCAAAGTTACCAAACCAAA+AGG | + | chr4.3:206052-206071 | None:intergenic | 30.0% | |
ATGAATACAAAAGCAATGTC+TGG | + | chr4.3:204492-204511 | None:intergenic | 30.0% | |
ATGATGAAATGGTTGAAAGA+TGG | - | chr4.3:205546-205565 | MS.gene047006:intron | 30.0% | |
ATGTATGATTGTATGAACTG+TGG | - | chr4.3:205028-205047 | MS.gene047006:intron | 30.0% | |
ATTATAAGTGTATAGTGTGG+CGG | + | chr4.3:205421-205440 | None:intergenic | 30.0% | |
CAAACCTTTGTGTAAAATCT+GGG | + | chr4.3:205654-205673 | None:intergenic | 30.0% | |
CATGTTTGAACCTAATTAAC+GGG | - | chr4.3:205819-205838 | MS.gene047006:intron | 30.0% | |
CTATATTAAGTGATAAGCAG+CGG | + | chr4.3:207289-207308 | None:intergenic | 30.0% | |
CTCTCAATTAAGAAGAATTC+TGG | - | chr4.3:209157-209176 | MS.gene047006:intron | 30.0% | |
CTTATGAGTTGCTTAATTCT+TGG | - | chr4.3:207445-207464 | MS.gene047006:CDS | 30.0% | |
GAAAGTTCAGTAATTTGAAC+AGG | - | chr4.3:208032-208051 | MS.gene047006:CDS | 30.0% | |
GATGTATCTTTCAGATAATG+AGG | - | chr4.3:204918-204937 | MS.gene047006:intron | 30.0% | |
GATTAGACTATGAATTGGAT+TGG | + | chr4.3:204312-204331 | None:intergenic | 30.0% | |
GTAACCAAGGTTTCAAAAAA+CGG | - | chr4.3:207826-207845 | MS.gene047006:intron | 30.0% | |
GTGAAATTCAGAAATCATAC+TGG | - | chr4.3:203757-203776 | MS.gene047006:intron | 30.0% | |
TAACCAAGGTTTCAAAAAAC+GGG | - | chr4.3:207827-207846 | MS.gene047006:intron | 30.0% | |
TAAGTGTGGAAGTTTGAAAA+CGG | + | chr4.3:204229-204248 | None:intergenic | 30.0% | |
TGAATCTTTGGCATAATTTC+AGG | + | chr4.3:207266-207285 | None:intergenic | 30.0% | |
TTAAATACCTGCATGAACAA+AGG | + | chr4.3:206127-206146 | None:intergenic | 30.0% | |
TTAAGTTACTAAGCAAAGCA+TGG | - | chr4.3:205169-205188 | MS.gene047006:intron | 30.0% | |
TTCTCTTTGCAATATCAACA+AGG | - | chr4.3:204267-204286 | MS.gene047006:CDS | 30.0% | |
! | AATTAAACTATTGGTCTCGT+TGG | - | chr4.3:209134-209153 | MS.gene047006:intron | 30.0% |
! | ACATTGACAGGCAAATTTTA+TGG | + | chr4.3:204418-204437 | None:intergenic | 30.0% |
! | ATAATAATACCCTGTTGGTT+TGG | - | chr4.3:206082-206101 | MS.gene047006:CDS | 30.0% |
! | ATCTTTTGTACAGAAAAGTC+AGG | - | chr4.3:208074-208093 | MS.gene047006:CDS | 30.0% |
! | ATTGTTCAAGTTTGCAATTC+TGG | - | chr4.3:208333-208352 | MS.gene047006:intron | 30.0% |
! | GTAAGGCAAATAATACCTTT+TGG | - | chr4.3:206034-206053 | MS.gene047006:CDS | 30.0% |
! | TATTCAGCAAATTCTGAAGA+TGG | + | chr4.3:209430-209449 | None:intergenic | 30.0% |
! | TCTAGTAATTACAAGGTGTT+AGG | - | chr4.3:206591-206610 | MS.gene047006:intron | 30.0% |
! | TGATAATATGATGGTGCAAT+TGG | + | chr4.3:203958-203977 | None:intergenic | 30.0% |
!! | AATTTTGATGTTGAGGTTGT+TGG | - | chr4.3:207573-207592 | MS.gene047006:intron | 30.0% |
!! | ACTGATTTTCCTTCATATTC+TGG | + | chr4.3:204558-204577 | None:intergenic | 30.0% |
!! | AGAATTTGCTGAATACATCA+AGG | - | chr4.3:209435-209454 | MS.gene047006:intron | 30.0% |
!! | CAATCATTTTGTTGGCTAAA+GGG | - | chr4.3:209194-209213 | MS.gene047006:intron | 30.0% |
!! | GCAAATAATACCTTTTGGTT+TGG | - | chr4.3:206039-206058 | MS.gene047006:CDS | 30.0% |
!! | TCAATCATTTTGTTGGCTAA+AGG | - | chr4.3:209193-209212 | MS.gene047006:intron | 30.0% |
!!! | CTTCTCAGGATATGTTTTTT+TGG | + | chr4.3:207688-207707 | None:intergenic | 30.0% |
!!! | GGTTGCTTTTCCAAATTTTA+CGG | - | chr4.3:205879-205898 | MS.gene047006:intron | 30.0% |
!!! | TTTAATCCTGCTTTTTTACC+TGG | + | chr4.3:206249-206268 | None:intergenic | 30.0% |
AAATGTGAAAGATGAGGAGA+CGG | + | chr4.3:203869-203888 | None:intergenic | 35.0% | |
AAGTGTGGAAGTTTGAAAAC+GGG | + | chr4.3:204228-204247 | None:intergenic | 35.0% | |
ACAAAACACTCCCGTTAATT+AGG | + | chr4.3:205832-205851 | None:intergenic | 35.0% | |
ACAATGAAATTGTGGAGAGA+TGG | - | chr4.3:209924-209943 | MS.gene047006:intron | 35.0% | |
ACGAGTGTAGATTACATCAT+AGG | + | chr4.3:207712-207731 | None:intergenic | 35.0% | |
AGAATCTATCATCCTGATCA+AGG | - | chr4.3:207383-207402 | MS.gene047006:intron | 35.0% | |
AGGTTAGATCACATGATGAT+AGG | - | chr4.3:206369-206388 | MS.gene047006:intron | 35.0% | |
AGTGTCAGCTGAAATCAAAT+GGG | + | chr4.3:209529-209548 | None:intergenic | 35.0% | |
AGTTAATGTTGAGCACTCAT+TGG | - | chr4.3:206001-206020 | MS.gene047006:CDS | 35.0% | |
ATACTTCAATACTAGCAACC+AGG | + | chr4.3:206904-206923 | None:intergenic | 35.0% | |
ATCAGTGATTTCAGCAATGT+GGG | - | chr4.3:209807-209826 | MS.gene047006:CDS | 35.0% | |
ATGAAATGGTTGAAAGATGG+TGG | - | chr4.3:205549-205568 | MS.gene047006:intron | 35.0% | |
ATGATATGTTGCTCTTAGAC+TGG | - | chr4.3:207317-207336 | MS.gene047006:intron | 35.0% | |
ATTACAATCCTACTCACTAC+AGG | - | chr4.3:205625-205644 | MS.gene047006:intron | 35.0% | |
ATTACATCATAGGTCTTCTC+AGG | + | chr4.3:207702-207721 | None:intergenic | 35.0% | |
ATTCCAAGCAATTGTTACAG+AGG | + | chr4.3:209014-209033 | None:intergenic | 35.0% | |
ATTGAAGTTACCAAACCAAC+AGG | + | chr4.3:206095-206114 | None:intergenic | 35.0% | |
ATTTCAGGATACGATCCAAA+TGG | + | chr4.3:207251-207270 | None:intergenic | 35.0% | |
CAAATGAATCGGCTACTAAA+TGG | + | chr4.3:204160-204179 | None:intergenic | 35.0% | |
CAACAATGAGTATCAAAGCT+AGG | + | chr4.3:207118-207137 | None:intergenic | 35.0% | |
CAACTCTATCTAAGAACTTC+TGG | + | chr4.3:206400-206419 | None:intergenic | 35.0% | |
CATGCTTACAGTTACATACA+AGG | + | chr4.3:208957-208976 | None:intergenic | 35.0% | |
CCATGCTATACATCAAAGTA+AGG | - | chr4.3:207736-207755 | MS.gene047006:intron | 35.0% | |
CCTTACTTTGATGTATAGCA+TGG | + | chr4.3:207739-207758 | None:intergenic | 35.0% | |
GAGTACATTGCAGAATACAA+AGG | + | chr4.3:209303-209322 | None:intergenic | 35.0% | |
GCGGAGAAAGGAAAATATAA+AGG | + | chr4.3:206500-206519 | None:intergenic | 35.0% | |
GCTTGTATTCTTTCATGTCA+TGG | + | chr4.3:209477-209496 | None:intergenic | 35.0% | |
GGAAAATCAGTTATTGAGCT+TGG | - | chr4.3:204567-204586 | MS.gene047006:intron | 35.0% | |
GGATGACTACAATGAAATTG+TGG | - | chr4.3:209916-209935 | MS.gene047006:intron | 35.0% | |
GGCAAATAATAATACCCTGT+TGG | - | chr4.3:206077-206096 | MS.gene047006:CDS | 35.0% | |
GGTTAGATCACATGATGATA+GGG | - | chr4.3:206370-206389 | MS.gene047006:intron | 35.0% | |
GTAACTGTAAGCATGAATGA+AGG | - | chr4.3:208962-208981 | MS.gene047006:intron | 35.0% | |
GTTAGATCACATGATGATAG+GGG | - | chr4.3:206371-206390 | MS.gene047006:intron | 35.0% | |
TACCTGGTCTAGTAATTACA+AGG | - | chr4.3:206584-206603 | MS.gene047006:intron | 35.0% | |
TACTTACTTCTCTTCTTTGG+TGG | - | chr4.3:208142-208161 | MS.gene047006:intron | 35.0% | |
TAGTGTCAGCTGAAATCAAA+TGG | + | chr4.3:209530-209549 | None:intergenic | 35.0% | |
TATCTTCTATCAGTGCTTTG+TGG | - | chr4.3:205124-205143 | MS.gene047006:intron | 35.0% | |
TCAAAACCAGGTAAAAAAGC+AGG | - | chr4.3:206240-206259 | MS.gene047006:intron | 35.0% | |
TCAAAGCTAGGCATTTCAAA+AGG | + | chr4.3:207106-207125 | None:intergenic | 35.0% | |
TCACTTTCAACCTAGAGTTT+AGG | + | chr4.3:209046-209065 | None:intergenic | 35.0% | |
TGACATGAAAGAATACAAGC+AGG | - | chr4.3:209477-209496 | MS.gene047006:intron | 35.0% | |
TGGATTTGATGTCATTGTTG+AGG | - | chr4.3:209618-209637 | MS.gene047006:intron | 35.0% | |
TTACAATCCTACTCACTACA+GGG | - | chr4.3:205626-205645 | MS.gene047006:intron | 35.0% | |
TTACTGTCAGTTGGAATCAT+GGG | + | chr4.3:205062-205081 | None:intergenic | 35.0% | |
TTGAAGTTACCAAACCAACA+GGG | + | chr4.3:206094-206113 | None:intergenic | 35.0% | |
TTGTAGTTATCTCTATCCCT+TGG | - | chr4.3:205678-205697 | MS.gene047006:intron | 35.0% | |
TTGTATTCTGCAATGTACTC+TGG | - | chr4.3:209303-209322 | MS.gene047006:intron | 35.0% | |
TTTACGAGTAATAAGGTGGA+TGG | + | chr4.3:209080-209099 | None:intergenic | 35.0% | |
TTTACTGTCAGTTGGAATCA+TGG | + | chr4.3:205063-205082 | None:intergenic | 35.0% | |
TTTCCCAATGCTGTTAAACA+CGG | - | chr4.3:205279-205298 | MS.gene047006:intron | 35.0% | |
TTTGCTGAATACATCAAGGA+AGG | - | chr4.3:209439-209458 | MS.gene047006:intron | 35.0% | |
! | ACTCTAGGTTGAAAGTGATT+TGG | - | chr4.3:209048-209067 | MS.gene047006:CDS | 35.0% |
! | ATCAGGTTTGTTTGATCCTT+TGG | - | chr4.3:209650-209669 | MS.gene047006:intron | 35.0% |
! | CATTGAGAGTGCAATAAAGA+AGG | - | chr4.3:204656-204675 | MS.gene047006:intron | 35.0% |
! | CATTTAGTAGCCGATTCATT+TGG | - | chr4.3:204158-204177 | MS.gene047006:CDS | 35.0% |
! | CTGAACTTTCAAGTCTGTAA+CGG | + | chr4.3:208022-208041 | None:intergenic | 35.0% |
! | GATTCGCATTTCAATTTTGC+AGG | - | chr4.3:203714-203733 | MS.gene047006:CDS | 35.0% |
! | GCTTTTCCAAATTTTACGGT+TGG | - | chr4.3:205883-205902 | MS.gene047006:intron | 35.0% |
! | GTTTGGTAACTTTGATCTGT+AGG | - | chr4.3:206056-206075 | MS.gene047006:CDS | 35.0% |
! | TGTTAATTTGAAGCGGAGAA+AGG | + | chr4.3:206512-206531 | None:intergenic | 35.0% |
! | TGTTTTGTGATGGTAAAGGT+GGG | - | chr4.3:205844-205863 | MS.gene047006:intron | 35.0% |
! | TTTTACAAGTGGTTGAAACC+TGG | - | chr4.3:209361-209380 | MS.gene047006:intron | 35.0% |
! | TTTTTGTTCTCGACGTGAAA+AGG | + | chr4.3:207914-207933 | None:intergenic | 35.0% |
!! | CTGTAGAACGAAAGCATTAA+CGG | - | chr4.3:204796-204815 | MS.gene047006:intron | 35.0% |
!! | CTTTTCATTCTTTGGTGACT+GGG | - | chr4.3:206720-206739 | MS.gene047006:intron | 35.0% |
!! | GAATTGGATTGGTGCATTAT+TGG | + | chr4.3:204301-204320 | None:intergenic | 35.0% |
!! | GGCTGAAAATTTTGATGTTG+AGG | - | chr4.3:207566-207585 | MS.gene047006:intron | 35.0% |
!! | TTTTCATTCTTTGGTGACTG+GGG | - | chr4.3:206721-206740 | MS.gene047006:intron | 35.0% |
!!! | ACTGCTGTGTTTTTAGGTAA+GGG | + | chr4.3:206623-206642 | None:intergenic | 35.0% |
!!! | CTAACCTTTTGTTTTTCCCT+TGG | - | chr4.3:205494-205513 | MS.gene047006:intron | 35.0% |
AAAAGGTCCAAAAACGGTCA+CGG | + | chr4.3:207897-207916 | None:intergenic | 40.0% | |
AAACCTTGGTTACATACACC+TGG | + | chr4.3:207819-207838 | None:intergenic | 40.0% | |
AAAGGAACTTGTAGCTAAGC+TGG | - | chr4.3:207479-207498 | MS.gene047006:CDS | 40.0% | |
AACCTTGGTTACATACACCT+GGG | + | chr4.3:207818-207837 | None:intergenic | 40.0% | |
AATAATCTGGCAGAGACCAA+GGG | + | chr4.3:205697-205716 | None:intergenic | 40.0% | |
AATCCTGTTTCCACCAATCT+GGG | - | chr4.3:205589-205608 | MS.gene047006:intron | 40.0% | |
ACGTGTGCACAAGAAATAGT+TGG | - | chr4.3:206683-206702 | MS.gene047006:intron | 40.0% | |
ACTATAGCACTGTTGTGTAG+TGG | + | chr4.3:205324-205343 | None:intergenic | 40.0% | |
AGCACCAAGGGAAAAACAAA+AGG | + | chr4.3:205501-205520 | None:intergenic | 40.0% | |
AGCACGGGAAATCACATTTA+TGG | + | chr4.3:207610-207629 | None:intergenic | 40.0% | |
AGCATATTGCGGAACAATAG+TGG | - | chr4.3:205383-205402 | MS.gene047006:intron | 40.0% | |
AGGAGTCCAAAGTATAAGTG+TGG | + | chr4.3:204243-204262 | None:intergenic | 40.0% | |
AGGTACGTAATGACATTGAC+AGG | + | chr4.3:204430-204449 | None:intergenic | 40.0% | |
AGTGTGGAAGTTTGAAAACG+GGG | + | chr4.3:204227-204246 | None:intergenic | 40.0% | |
ATTGGTGGAAACAGGATTCT+CGG | + | chr4.3:205587-205606 | None:intergenic | 40.0% | |
CAAGCAATTGTTACAGAGGA+AGG | + | chr4.3:209010-209029 | None:intergenic | 40.0% | |
CACCTTGTAATTACTAGACC+AGG | + | chr4.3:206589-206608 | None:intergenic | 40.0% | |
CATCAGTGATTTCAGCAATG+TGG | - | chr4.3:209806-209825 | MS.gene047006:CDS | 40.0% | |
CATTGCAGAATACAAAGGTC+AGG | + | chr4.3:209298-209317 | None:intergenic | 40.0% | |
CCAGTCACCAAAGAATGAAA+AGG | + | chr4.3:206722-206741 | None:intergenic | 40.0% | |
CCTTCAGAAACATCCATCTT+TGG | + | chr4.3:204865-204884 | None:intergenic | 40.0% | |
CTAGACCAGGTAAATGACAA+CGG | + | chr4.3:206576-206595 | None:intergenic | 40.0% | |
CTTCCTCTGTAACAATTGCT+TGG | - | chr4.3:209008-209027 | MS.gene047006:CDS | 40.0% | |
GACGTGAAAAGGTCCAAAAA+CGG | + | chr4.3:207903-207922 | None:intergenic | 40.0% | |
GAGACACCAACCGTAAAATT+TGG | + | chr4.3:205892-205911 | None:intergenic | 40.0% | |
GATACAAATAACGGTCTTCG+CGG | + | chr4.3:208861-208880 | None:intergenic | 40.0% | |
GCCATATGAGTGATATCTCT+GGG | - | chr4.3:206152-206171 | MS.gene047006:CDS | 40.0% | |
GGCTACTAAATGGTAGATGA+TGG | + | chr4.3:204150-204169 | None:intergenic | 40.0% | |
GGGAAATCACATTTATGGAG+AGG | + | chr4.3:207605-207624 | None:intergenic | 40.0% | |
GTAATTAGAAGTTGACCTCC+AGG | + | chr4.3:209382-209401 | None:intergenic | 40.0% | |
GTTCTACAGAACGTTATGAG+TGG | + | chr4.3:204785-204804 | None:intergenic | 40.0% | |
TACCAAGCAAACTAGACCAA+AGG | + | chr4.3:209669-209688 | None:intergenic | 40.0% | |
TACCCGTGTTTAACAGCATT+GGG | + | chr4.3:205285-205304 | None:intergenic | 40.0% | |
TCCCAGAGATATCACTCATA+TGG | + | chr4.3:206156-206175 | None:intergenic | 40.0% | |
TCCGGTAAATCTTCCAATAC+CGG | + | chr4.3:204595-204614 | None:intergenic | 40.0% | |
TCCTTCATATTCTGGTAGCA+GGG | + | chr4.3:204550-204569 | None:intergenic | 40.0% | |
TCCTTTGAGCTTTCTCTTGT+GGG | - | chr4.3:206178-206197 | MS.gene047006:intron | 40.0% | |
TGAAATTGTGGAGAGATGGA+AGG | - | chr4.3:209928-209947 | MS.gene047006:intron | 40.0% | |
TGAGTGAGTGACATAATACC+TGG | + | chr4.3:203652-203671 | None:intergenic | 40.0% | |
TGCAAGTGTAAGAACCGAAA+AGG | + | chr4.3:209110-209129 | None:intergenic | 40.0% | |
TGCATGAACAAAGGAGAAGA+CGG | + | chr4.3:206118-206137 | None:intergenic | 40.0% | |
TGCATGTATGATGCCATACT+TGG | - | chr4.3:207340-207359 | MS.gene047006:intron | 40.0% | |
TGCCATATGAGTGATATCTC+TGG | - | chr4.3:206151-206170 | MS.gene047006:CDS | 40.0% | |
TGGAAGATTTACCGGAGAAT+TGG | - | chr4.3:204599-204618 | MS.gene047006:intron | 40.0% | |
TTACTTCTCTTCTTTGGTGG+TGG | - | chr4.3:208145-208164 | MS.gene047006:intron | 40.0% | |
TTCAAAAAACGGGACGTTAC+CGG | - | chr4.3:207837-207856 | MS.gene047006:intron | 40.0% | |
TTCCCAATGCTGTTAAACAC+GGG | - | chr4.3:205280-205299 | MS.gene047006:intron | 40.0% | |
TTCCTTCATATTCTGGTAGC+AGG | + | chr4.3:204551-204570 | None:intergenic | 40.0% | |
TTCCTTTGAGCTTTCTCTTG+TGG | - | chr4.3:206177-206196 | MS.gene047006:intron | 40.0% | |
TTCTCTTTGAATCCCCAGAT+TGG | + | chr4.3:205605-205624 | None:intergenic | 40.0% | |
! | ACAGCTTGTTTACTGTCAGT+TGG | + | chr4.3:205071-205090 | None:intergenic | 40.0% |
! | ACTGATTACTGCAAAAGTGC+TGG | - | chr4.3:209400-209419 | MS.gene047006:intron | 40.0% |
! | AGAAACATCCATCTTTGGAG+AGG | + | chr4.3:204860-204879 | None:intergenic | 40.0% |
! | ATGTTCCGTTGTCATTTACC+TGG | - | chr4.3:206568-206587 | MS.gene047006:intron | 40.0% |
! | CAGCAGATTTAGAACACAAG+GGG | + | chr4.3:209581-209600 | None:intergenic | 40.0% |
! | CCAAAGATGGATGTTTCTGA+AGG | - | chr4.3:204862-204881 | MS.gene047006:intron | 40.0% |
! | GCAGCAGATTTAGAACACAA+GGG | + | chr4.3:209582-209601 | None:intergenic | 40.0% |
! | GGAACCCAGATTTTACACAA+AGG | - | chr4.3:205647-205666 | MS.gene047006:intron | 40.0% |
! | GTGTTTTGTGATGGTAAAGG+TGG | - | chr4.3:205843-205862 | MS.gene047006:intron | 40.0% |
! | TGCAGCAGATTTAGAACACA+AGG | + | chr4.3:209583-209602 | None:intergenic | 40.0% |
! | TTTATTAGCACTGGAGGACT+TGG | - | chr4.3:206470-206489 | MS.gene047006:intron | 40.0% |
! | TTTTCATGGTGCAGATTTGC+TGG | - | chr4.3:206336-206355 | MS.gene047006:intron | 40.0% |
!! | AAAGTACTGGATGTTGGTTG+TGG | - | chr4.3:207519-207538 | MS.gene047006:intron | 40.0% |
!! | AAGGTTCTAAATAACGGTCG+CGG | + | chr4.3:208938-208957 | None:intergenic | 40.0% |
!! | ATCCTTTGGTCTAGTTTGCT+TGG | - | chr4.3:209664-209683 | MS.gene047006:intron | 40.0% |
!! | ATGTACTCTGGATTTGTTGC+AGG | - | chr4.3:209315-209334 | MS.gene047006:intron | 40.0% |
!! | CCTTTTCATTCTTTGGTGAC+TGG | - | chr4.3:206719-206738 | MS.gene047006:intron | 40.0% |
!! | GATTTGCTGGATATGGCAAA+AGG | - | chr4.3:206349-206368 | MS.gene047006:intron | 40.0% |
!! | GGAGTGTTTTGTGATGGTAA+AGG | - | chr4.3:205840-205859 | MS.gene047006:intron | 40.0% |
!!! | GACTGCTGTGTTTTTAGGTA+AGG | + | chr4.3:206624-206643 | None:intergenic | 40.0% |
!!! | TTAACGGGAGTGTTTTGTGA+TGG | - | chr4.3:205834-205853 | MS.gene047006:intron | 40.0% |
ACATCCAGTACTTTCTGACC+AGG | + | chr4.3:207513-207532 | None:intergenic | 45.0% | |
ACCTTGGTTACATACACCTG+GGG | + | chr4.3:207817-207836 | None:intergenic | 45.0% | |
AGCTGCATACGTGTGTGTAT+TGG | + | chr4.3:208411-208430 | None:intergenic | 45.0% | |
ATCCTGTTTCCACCAATCTG+GGG | - | chr4.3:205590-205609 | MS.gene047006:intron | 45.0% | |
ATGCTGTTAAACACGGGTAG+TGG | - | chr4.3:205286-205305 | MS.gene047006:intron | 45.0% | |
CAAAGCTTCTGATCTCGACA+AGG | - | chr4.3:203827-203846 | MS.gene047006:intron | 45.0% | |
CAATAATCTGGCAGAGACCA+AGG | + | chr4.3:205698-205717 | None:intergenic | 45.0% | |
CGATAGCACGTTCAATAGCA+CGG | + | chr4.3:207626-207645 | None:intergenic | 45.0% | |
CTACCCGTGTTTAACAGCAT+TGG | + | chr4.3:205286-205305 | None:intergenic | 45.0% | |
CTCCAGTGCTAATAAAGCCT+TGG | + | chr4.3:206466-206485 | None:intergenic | 45.0% | |
CTTGTCGAGATCAGAAGCTT+TGG | + | chr4.3:203829-203848 | None:intergenic | 45.0% | |
GAATCCTGTTTCCACCAATC+TGG | - | chr4.3:205588-205607 | MS.gene047006:intron | 45.0% | |
GACATCAGCGCACAAAAACT+TGG | + | chr4.3:204836-204855 | None:intergenic | 45.0% | |
GATAAGCAGCGGTGAATCTT+TGG | + | chr4.3:207278-207297 | None:intergenic | 45.0% | |
GATAGCACGTTCAATAGCAC+GGG | + | chr4.3:207625-207644 | None:intergenic | 45.0% | |
GCTGAATACATCAAGGAAGG+AGG | - | chr4.3:209442-209461 | MS.gene047006:intron | 45.0% | |
GGACGCTGCGATACAAATAA+CGG | + | chr4.3:208870-208889 | None:intergenic | 45.0% | |
GTCTTCTCCTTTGTTCATGC+AGG | - | chr4.3:206117-206136 | MS.gene047006:CDS | 45.0% | |
GTTTGTGAAAACACTGCAGC+AGG | - | chr4.3:209749-209768 | MS.gene047006:intron | 45.0% | |
TACAAGTGGTTGAAACCTGG+AGG | - | chr4.3:209364-209383 | MS.gene047006:intron | 45.0% | |
TACATACACCTGGGGCTAAA+AGG | + | chr4.3:207809-207828 | None:intergenic | 45.0% | |
TCAAAAAACGGGACGTTACC+GGG | - | chr4.3:207838-207857 | MS.gene047006:intron | 45.0% | |
TCAGTTATTGAGCTTGGAGC+CGG | - | chr4.3:204573-204592 | MS.gene047006:intron | 45.0% | |
TCCCTGCTACCAGAATATGA+AGG | - | chr4.3:204546-204565 | MS.gene047006:intron | 45.0% | |
TCTAAATCTGCTGCAGATGC+TGG | - | chr4.3:209588-209607 | MS.gene047006:intron | 45.0% | |
TCTTTGAATCCCCAGATTGG+TGG | + | chr4.3:205602-205621 | None:intergenic | 45.0% | |
TGATGTCACCTCTCCAAAGA+TGG | - | chr4.3:204849-204868 | MS.gene047006:intron | 45.0% | |
TGTTGAGGATCGAACTGATC+AGG | - | chr4.3:209633-209652 | MS.gene047006:intron | 45.0% | |
TTACGATATGAGCGCGTGTA+TGG | - | chr4.3:206440-206459 | MS.gene047006:intron | 45.0% | |
TTCTTGGGCAGAAACGACAA+AGG | - | chr4.3:207461-207480 | MS.gene047006:CDS | 45.0% | |
! | AAAGCCTGGTCAGAAAGTAC+TGG | - | chr4.3:207506-207525 | MS.gene047006:intron | 45.0% |
! | ACAAGTAAGAGCATGACGTC+AGG | - | chr4.3:204338-204357 | MS.gene047006:intron | 45.0% |
! | ATTCTCAACCTGAAGCACCA+AGG | + | chr4.3:205514-205533 | None:intergenic | 45.0% |
! | CAGCATTGGGAAATACTACG+CGG | + | chr4.3:205272-205291 | None:intergenic | 45.0% |
! | CGTGCTATTGAACGTGCTAT+CGG | - | chr4.3:207624-207643 | MS.gene047006:intron | 45.0% |
! | CTTGTGGGCTGTAAATGCAT+TGG | - | chr4.3:206193-206212 | MS.gene047006:intron | 45.0% |
! | GCCGGTATTGGAAGATTTAC+CGG | - | chr4.3:204591-204610 | MS.gene047006:intron | 45.0% |
! | GGTTGAAAGTGATTTGGCAG+TGG | - | chr4.3:209054-209073 | MS.gene047006:CDS | 45.0% |
! | GTGTATAGTGTGGCGGAATT+TGG | + | chr4.3:205414-205433 | None:intergenic | 45.0% |
! | TTCTCAACCTGAAGCACCAA+GGG | + | chr4.3:205513-205532 | None:intergenic | 45.0% |
!! | AAAGGTGGGCTATAGGTCAT+GGG | - | chr4.3:205858-205877 | MS.gene047006:intron | 45.0% |
!! | AGCTTTATCCTTTTAGCCCC+AGG | - | chr4.3:207798-207817 | MS.gene047006:intron | 45.0% |
!! | CAAGGCTTTATTAGCACTGG+AGG | - | chr4.3:206464-206483 | MS.gene047006:intron | 45.0% |
!! | CTGCCGATACCGATTTGTAA+CGG | + | chr4.3:207871-207890 | None:intergenic | 45.0% |
!! | GGTCAGAAAGTACTGGATGT+TGG | - | chr4.3:207513-207532 | MS.gene047006:intron | 45.0% |
!! | TAAAGGTGGGCTATAGGTCA+TGG | - | chr4.3:205857-205876 | MS.gene047006:intron | 45.0% |
!! | TGATGGTAAAGGTGGGCTAT+AGG | - | chr4.3:205851-205870 | MS.gene047006:intron | 45.0% |
!! | TGGTGCAGATTTGCTGGATA+TGG | - | chr4.3:206342-206361 | MS.gene047006:intron | 45.0% |
!!! | CGTCCCGTTTTTTGAAACCT+TGG | + | chr4.3:207833-207852 | None:intergenic | 45.0% |
!!! | TGTTTTTCCCTTGGTGCTTC+AGG | - | chr4.3:205503-205522 | MS.gene047006:intron | 45.0% |
!! | TTATATTTACTTTATAATTA+TGG | - | chr4.3:208748-208767 | MS.gene047006:CDS | 5.0% |
!!! | TTTTTTTTTTTTATATACAT+AGG | - | chr4.3:204518-204537 | MS.gene047006:intron | 5.0% |
AATTGCTCTCGAGAGCCAGA+AGG | - | chr4.3:209776-209795 | MS.gene047006:intron | 50.0% | |
AGCTTTCAGCGCCAATTCTC+CGG | + | chr4.3:204613-204632 | None:intergenic | 50.0% | |
ATCCACGGGTGAAGTGAAGA+GGG | + | chr4.3:204006-204025 | None:intergenic | 50.0% | |
ATCCCCAGATTGGTGGAAAC+AGG | + | chr4.3:205595-205614 | None:intergenic | 50.0% | |
ATCGCAAATCGCAAGCAGGA+AGG | + | chr4.3:208245-208264 | None:intergenic | 50.0% | |
ATCGCAAGCAGGAAGGAACA+TGG | + | chr4.3:208238-208257 | None:intergenic | 50.0% | |
ATGGAAGGCGAAGCAGATCA+GGG | - | chr4.3:209943-209962 | MS.gene047006:intron | 50.0% | |
ATTGAGCTTGGAGCCGGTAT+TGG | - | chr4.3:204579-204598 | MS.gene047006:intron | 50.0% | |
ATTTGTAACGGCCGCAATCC+CGG | + | chr4.3:207859-207878 | None:intergenic | 50.0% | |
CACTGATGAAGTCGTCCTTC+TGG | + | chr4.3:209794-209813 | None:intergenic | 50.0% | |
CAGAATCGCAAATCGCAAGC+AGG | + | chr4.3:208249-208268 | None:intergenic | 50.0% | |
CGACAAGGAAGAAAGACCTG+AGG | - | chr4.3:203842-203861 | MS.gene047006:CDS | 50.0% | |
CGGCCGTTACAAATCGGTAT+CGG | - | chr4.3:207865-207884 | MS.gene047006:intron | 50.0% | |
CGTTAAGGTTGTCGCGGTTT+CGG | + | chr4.3:208900-208919 | None:intergenic | 50.0% | |
CTGCTTGCGATTTGCGATTC+TGG | - | chr4.3:208247-208266 | MS.gene047006:intron | 50.0% | |
GCCCACAAGAGAAAGCTCAA+AGG | + | chr4.3:206182-206201 | None:intergenic | 50.0% | |
GCTAAGCTGGAACTAAAGCC+TGG | - | chr4.3:207492-207511 | MS.gene047006:CDS | 50.0% | |
GCTGAAAGCTGGTCAATTGC+TGG | - | chr4.3:204623-204642 | MS.gene047006:intron | 50.0% | |
GGATTGCGGCCGTTACAAAT+CGG | - | chr4.3:207859-207878 | MS.gene047006:intron | 50.0% | |
TGGCGGAGGTGATTTCTACA+TGG | - | chr4.3:207545-207564 | MS.gene047006:intron | 50.0% | |
! | CTGGATGTTGGTTGTGGTGT+TGG | - | chr4.3:207525-207544 | MS.gene047006:intron | 50.0% |
! | GATGTTGGTTGTGGTGTTGG+CGG | - | chr4.3:207528-207547 | MS.gene047006:intron | 50.0% |
! | GCTGCGACTGCTGTGTTTTT+AGG | + | chr4.3:206629-206648 | None:intergenic | 50.0% |
! | GTCTGTAACGGAGTCCGTAA+CGG | + | chr4.3:208010-208029 | None:intergenic | 50.0% |
! | TTGTGCTGATCTCTCTGTCG+AGG | - | chr4.3:203788-203807 | MS.gene047006:intron | 50.0% |
!! | GGCCAAGGCTTTATTAGCAC+TGG | - | chr4.3:206461-206480 | MS.gene047006:intron | 50.0% |
!! | TCTCTTCTTTGGTGGTGGAC+TGG | - | chr4.3:208150-208169 | MS.gene047006:intron | 50.0% |
AAGATGAGGAGACGGACCTC+AGG | + | chr4.3:203861-203880 | None:intergenic | 55.0% | |
AAGCAGATCAGGGGTGAACG+AGG | - | chr4.3:209953-209972 | MS.gene047006:intron | 55.0% | |
AGCAGATCAGGGGTGAACGA+GGG | - | chr4.3:209954-209973 | MS.gene047006:intron | 55.0% | |
AGGTCCAAAAACGGTCACGG+TGG | + | chr4.3:207894-207913 | None:intergenic | 55.0% | |
CATCCACGGGTGAAGTGAAG+AGG | + | chr4.3:204007-204026 | None:intergenic | 55.0% | |
CTGCAGATGCTGGAGAATGC+TGG | - | chr4.3:209598-209617 | MS.gene047006:intron | 55.0% | |
CTGGGTTCCCTGTAGTGAGT+AGG | + | chr4.3:205636-205655 | None:intergenic | 55.0% | |
GAGTCCGTAACGGTGTTTCG+CGG | + | chr4.3:208000-208019 | None:intergenic | 55.0% | |
GATGGAAGGCGAAGCAGATC+AGG | - | chr4.3:209942-209961 | MS.gene047006:intron | 55.0% | |
GCCCCAGGTGTATGTAACCA+AGG | - | chr4.3:207813-207832 | MS.gene047006:intron | 55.0% | |
GGCGTTACAGAACGCCGTTA+CGG | - | chr4.3:207955-207974 | MS.gene047006:intron | 55.0% | |
GGCGTTCTGTAACGCCGTAA+CGG | + | chr4.3:207951-207970 | None:intergenic | 55.0% | |
TATGAGCGCGTGTATGGCCA+AGG | - | chr4.3:206446-206465 | MS.gene047006:intron | 55.0% | |
TGAACGAGGGGAGCAGAAGT+GGG | - | chr4.3:209967-209986 | MS.gene047006:intron | 55.0% | |
TGGAAGGCGAAGCAGATCAG+GGG | - | chr4.3:209944-209963 | MS.gene047006:intron | 55.0% | |
TGTCGCGGTTTCGGCTGTAA+CGG | + | chr4.3:208891-208910 | None:intergenic | 55.0% | |
! | AGCTGGTCAATTGCTGGCTG+TGG | - | chr4.3:204629-204648 | MS.gene047006:intron | 55.0% |
! | GGAGAATTGGCGCTGAAAGC+TGG | - | chr4.3:204612-204631 | MS.gene047006:intron | 55.0% |
! | TCAGCGAGAAGCGTGTGATC+AGG | - | chr4.3:207051-207070 | MS.gene047006:intron | 55.0% |
ACGGCCGCGAAACACCGTTA+CGG | - | chr4.3:207993-208012 | MS.gene047006:CDS | 60.0% | |
ACGGGACGTTACCGGGATTG+CGG | - | chr4.3:207845-207864 | MS.gene047006:intron | 60.0% | |
ACGGTGTTTCGCGGCCGTAA+CGG | + | chr4.3:207991-208010 | None:intergenic | 60.0% | |
CGGTCGCGTTAAGGTTGTCG+CGG | + | chr4.3:208906-208925 | None:intergenic | 60.0% | |
CTCCCTCTTCACTTCACCCG+TGG | - | chr4.3:204001-204020 | MS.gene047006:CDS | 60.0% | |
GAACGAGGGGAGCAGAAGTG+GGG | - | chr4.3:209968-209987 | MS.gene047006:intron | 60.0% | |
GCAGATCAGGGGTGAACGAG+GGG | - | chr4.3:209955-209974 | MS.gene047006:intron | 60.0% | |
GTGAACGAGGGGAGCAGAAG+TGG | - | chr4.3:209966-209985 | MS.gene047006:intron | 60.0% | |
! | GCAGCCACCGTGACCGTTTT+TGG | - | chr4.3:207887-207906 | MS.gene047006:intron | 60.0% |
!! | GTTGGTTGTGGTGTTGGCGG+AGG | - | chr4.3:207531-207550 | MS.gene047006:intron | 60.0% |
ACGGCCGCGAAACGCCGTTA+CGG | - | chr4.3:207974-207993 | MS.gene047006:intron | 65.0% | |
ACGGCGTTTCGCGGCCGTAA+CGG | + | chr4.3:207972-207991 | None:intergenic | 65.0% | |
TCGCGATCGCGGTCGCGTTA+AGG | + | chr4.3:208915-208934 | None:intergenic | 65.0% | |
AACGGTCGCGGTCGCGATCG+CGG | + | chr4.3:208926-208945 | None:intergenic | 70.0% | |
GCGGCCGTAACGGCGTTTCG+CGG | + | chr4.3:207981-208000 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 203640 | 210015 | 203640 | ID=MS.gene047006 |
chr4.3 | mRNA | 203640 | 210015 | 203640 | ID=MS.gene047006.t1;Parent=MS.gene047006 |
chr4.3 | exon | 210003 | 210015 | 210003 | ID=MS.gene047006.t1.exon1;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 210003 | 210015 | 210003 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 209792 | 209919 | 209792 | ID=MS.gene047006.t1.exon2;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 209792 | 209919 | 209792 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 208978 | 209115 | 208978 | ID=MS.gene047006.t1.exon3;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 208978 | 209115 | 208978 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 208716 | 208853 | 208716 | ID=MS.gene047006.t1.exon4;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 208716 | 208853 | 208716 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 207987 | 208130 | 207987 | ID=MS.gene047006.t1.exon5;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 207987 | 208130 | 207987 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 207406 | 207516 | 207406 | ID=MS.gene047006.t1.exon6;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 207406 | 207516 | 207406 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 207164 | 207305 | 207164 | ID=MS.gene047006.t1.exon7;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 207164 | 207305 | 207164 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 205903 | 206183 | 205903 | ID=MS.gene047006.t1.exon8;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 205903 | 206183 | 205903 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 204157 | 204318 | 204157 | ID=MS.gene047006.t1.exon9;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 204157 | 204318 | 204157 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 204001 | 204051 | 204001 | ID=MS.gene047006.t1.exon10;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 204001 | 204051 | 204001 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 203831 | 203905 | 203831 | ID=MS.gene047006.t1.exon11;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 203831 | 203905 | 203831 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
chr4.3 | exon | 203640 | 203738 | 203640 | ID=MS.gene047006.t1.exon12;Parent=MS.gene047006.t1 |
chr4.3 | CDS | 203640 | 203738 | 203640 | ID=cds.MS.gene047006.t1;Parent=MS.gene047006.t1 |
Gene Sequence |
Protein sequence |