Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93748.t1 | XP_003631124.2 | 98.2 | 494 | 8 | 1 | 1 | 493 | 1 | 494 | 9.10E-285 | 988.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93748.t1 | Q9M571 | 72.7 | 494 | 134 | 1 | 1 | 493 | 1 | 494 | 1.6e-221 | 770.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93748.t1 | G7LE68 | 98.2 | 494 | 8 | 1 | 1 | 493 | 1 | 494 | 6.6e-285 | 988.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056442 | MS.gene93748 | 0.814485 | 1.50E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93748 | MS.gene047043 | PPI |
| MS.gene93748 | MS.gene047006 | PPI |
| MS.gene93748 | MS.gene042859 | PPI |
| MS.gene047043 | MS.gene93748 | PPI |
| MS.gene93748 | MS.gene040109 | PPI |
| MS.gene93748 | MS.gene066974 | PPI |
| MS.gene93748 | MS.gene82097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93748.t1 | MTR_8g107370 | 98.178 | 494 | 8 | 1 | 1 | 493 | 1 | 494 | 0.0 | 1003 |
| MS.gene93748.t1 | MTR_8g107370 | 98.361 | 488 | 8 | 0 | 6 | 493 | 1 | 488 | 0.0 | 996 |
| MS.gene93748.t1 | MTR_8g107370 | 98.268 | 462 | 7 | 1 | 1 | 461 | 1 | 462 | 0.0 | 939 |
| MS.gene93748.t1 | MTR_8g107370 | 96.214 | 449 | 16 | 1 | 1 | 448 | 1 | 449 | 0.0 | 867 |
| MS.gene93748.t1 | MTR_6g069600 | 80.785 | 484 | 92 | 1 | 10 | 492 | 13 | 496 | 0.0 | 824 |
| MS.gene93748.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 277 | 431 | 43 | 206 | 7.93e-14 | 72.4 |
| MS.gene93748.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 277 | 431 | 86 | 249 | 1.26e-13 | 72.4 |
| MS.gene93748.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 287 | 399 | 75 | 189 | 1.87e-11 | 65.5 |
| MS.gene93748.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 287 | 399 | 130 | 244 | 2.17e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93748.t1 | AT1G48600 | 72.008 | 493 | 134 | 2 | 1 | 492 | 1 | 490 | 0.0 | 755 |
| MS.gene93748.t1 | AT3G18000 | 71.694 | 484 | 136 | 1 | 10 | 492 | 7 | 490 | 0.0 | 753 |
| MS.gene93748.t1 | AT1G73600 | 70.994 | 493 | 140 | 2 | 3 | 492 | 11 | 503 | 0.0 | 752 |
| MS.gene93748.t1 | AT1G73600 | 71.400 | 493 | 136 | 2 | 1 | 492 | 1 | 489 | 0.0 | 751 |
| MS.gene93748.t1 | AT1G48600 | 72.574 | 474 | 129 | 1 | 20 | 492 | 1 | 474 | 0.0 | 735 |
| MS.gene93748.t1 | AT5G13710 | 33.537 | 164 | 100 | 4 | 277 | 431 | 86 | 249 | 1.34e-14 | 75.5 |
| MS.gene93748.t1 | AT5G13710 | 33.537 | 164 | 100 | 4 | 277 | 431 | 86 | 249 | 1.34e-14 | 75.5 |
| MS.gene93748.t1 | AT1G64970 | 28.846 | 104 | 72 | 1 | 289 | 390 | 130 | 233 | 1.59e-11 | 66.2 |
Find 108 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCACGGGAAATCACATTTA+TGG | 0.261865 | 4.2:+185162 | None:intergenic |
| CAACTCTATCTAAGAACTTC+TGG | 0.266070 | 4.2:+186375 | None:intergenic |
| TCCTTTGAGCTTTCTCTTGT+GGG | 0.273120 | 4.2:-186594 | MS.gene93748:CDS |
| ACAAACCTTTGTGTAAAATC+TGG | 0.284632 | 4.2:+187117 | None:intergenic |
| GTGAACGAGGGGAGCAGAAG+TGG | 0.305672 | 4.2:-183939 | MS.gene93748:CDS |
| GATGGAAGGCGAAGCAGATC+AGG | 0.322790 | 4.2:-183963 | MS.gene93748:CDS |
| CCTTCAGAAACATCCATCTT+TGG | 0.322834 | 4.2:+187908 | None:intergenic |
| GAATCCTGTTTCCACCAATC+TGG | 0.329775 | 4.2:-187181 | MS.gene93748:CDS |
| CACTGATGAAGTCGTCCTTC+TGG | 0.335719 | 4.2:+184114 | None:intergenic |
| CTTGTCGAGATCAGAAGCTT+TGG | 0.356843 | 4.2:+188944 | None:intergenic |
| TGGTGCAGATTTGCTGGATA+TGG | 0.363415 | 4.2:-186430 | MS.gene93748:intron |
| AGGTTAGATCACATGATGAT+AGG | 0.371337 | 4.2:-186403 | MS.gene93748:CDS |
| TGGAAGATTTACCGGAGAAT+TGG | 0.371460 | 4.2:-188171 | MS.gene93748:CDS |
| GCCGGTATTGGAAGATTTAC+CGG | 0.377974 | 4.2:-188179 | MS.gene93748:CDS |
| TTCCTTCATATTCTGGTAGC+AGG | 0.383460 | 4.2:+188222 | None:intergenic |
| GCTGAAAGCTGGTCAATTGC+TGG | 0.390425 | 4.2:-188147 | MS.gene93748:CDS |
| ATCCCCAGATTGGTGGAAAC+AGG | 0.392051 | 4.2:+187177 | None:intergenic |
| CTGTAGAACGAAAGCATTAA+CGG | 0.397285 | 4.2:-187974 | MS.gene93748:intron |
| GGAAAATCTGTTATTGAGCT+TGG | 0.403217 | 4.2:-188203 | MS.gene93748:CDS |
| TTCCTTTGAGCTTTCTCTTG+TGG | 0.410639 | 4.2:-186595 | MS.gene93748:CDS |
| TGTTGAGGATCGAACTGATC+AGG | 0.414212 | 4.2:-184272 | MS.gene93748:intron |
| TTTATTAGCACTGGAGGACT+TGG | 0.419528 | 4.2:-186302 | MS.gene93748:intron |
| ATTGAGCTTGGAGCCGGTAT+TGG | 0.428733 | 4.2:-188191 | MS.gene93748:CDS |
| TTACGATATGAGCGCGTGTA+TGG | 0.432033 | 4.2:-186332 | MS.gene93748:CDS |
| CTGGATGTTGGTTGTGGTGT+TGG | 0.442233 | 4.2:-185244 | MS.gene93748:CDS |
| GGTTAGATCACATGATGATA+GGG | 0.442687 | 4.2:-186402 | MS.gene93748:CDS |
| GTGAAATTCAGAAATCATAC+TGG | 0.443496 | 4.2:-189013 | MS.gene93748:CDS |
| GTTGGTTGTGGTGTTGGCGG+AGG | 0.443753 | 4.2:-185238 | MS.gene93748:CDS |
| TTCTCTTTGAATCCCCAGAT+TGG | 0.446538 | 4.2:+187167 | None:intergenic |
| TGCCATATGAGTGATATCTC+TGG | 0.446888 | 4.2:-186621 | MS.gene93748:CDS |
| GGCCAAGGCTTTATTAGCAC+TGG | 0.447921 | 4.2:-186311 | MS.gene93748:CDS |
| CTGCAGATGCTGGAGAATGC+TGG | 0.456311 | 4.2:-184307 | MS.gene93748:intron |
| AATCCTGTTTCCACCAATCT+GGG | 0.456764 | 4.2:-187180 | MS.gene93748:CDS |
| TCCCAGAGATATCACTCATA+TGG | 0.459147 | 4.2:+186619 | None:intergenic |
| CAAACCTTTGTGTAAAATCT+GGG | 0.462103 | 4.2:+187118 | None:intergenic |
| AGCTTTCAGCGCCAATTCTC+CGG | 0.462761 | 4.2:+188160 | None:intergenic |
| CATTCTTCCATGGCTTCACC+AGG | 0.473107 | 4.2:-189141 | None:intergenic |
| GGAGAATTGGCGCTGAAAGC+TGG | 0.475774 | 4.2:-188158 | MS.gene93748:CDS |
| ATTGGTGGAAACAGGATTCT+CGG | 0.477277 | 4.2:+187185 | None:intergenic |
| TGAACGAGGGGAGCAGAAGT+GGG | 0.479207 | 4.2:-183938 | MS.gene93748:CDS |
| AGCTGGTCAATTGCTGGCTG+TGG | 0.479823 | 4.2:-188141 | MS.gene93748:CDS |
| ACGAGTGTAGATTACATCAT+AGG | 0.479962 | 4.2:+185060 | None:intergenic |
| CGTGCTATTGAACGTGCTAT+CGG | 0.481806 | 4.2:-185145 | MS.gene93748:CDS |
| GTAATTAGAAGTTGACCTCC+AGG | 0.482434 | 4.2:+184526 | None:intergenic |
| GCTCGTATTCTTTCATGTCA+TGG | 0.482515 | 4.2:+184431 | None:intergenic |
| ATTACAATCCTACTCACTAC+AGG | 0.482810 | 4.2:-187144 | MS.gene93748:CDS |
| GTTTGTGAAAACACTGCAGC+AGG | 0.484254 | 4.2:-184156 | MS.gene93748:CDS |
| TAAAATGATCTAAATAATGT+TGG | 0.485432 | 4.2:+184562 | None:intergenic |
| CTTGTGGGCTGTAAATGCAT+TGG | 0.492972 | 4.2:-186579 | MS.gene93748:CDS |
| AAAGCCTGGTCAGAAAGTAC+TGG | 0.495881 | 4.2:-185263 | MS.gene93748:CDS |
| AAAGGAACTTGTAGCTAAGC+TGG | 0.495920 | 4.2:-185290 | MS.gene93748:CDS |
| CTCCAGTGCTAATAAAGCCT+TGG | 0.496405 | 4.2:+186309 | None:intergenic |
| TCCGGTAAATCTTCCAATAC+CGG | 0.497820 | 4.2:+188178 | None:intergenic |
| TCTTTGAATCCCCAGATTGG+TGG | 0.498788 | 4.2:+187170 | None:intergenic |
| ATTACATCATAGGTCTTCTC+AGG | 0.499504 | 4.2:+185070 | None:intergenic |
| TATTCAGCAAATTCTGAAGA+TGG | 0.499970 | 4.2:+184478 | None:intergenic |
| CCTTACTTTGATGTATAGCA+TGG | 0.513489 | 4.2:+185033 | None:intergenic |
| GATGTTGGTTGTGGTGTTGG+CGG | 0.516899 | 4.2:-185241 | MS.gene93748:CDS |
| TCTGTTATTGAGCTTGGAGC+CGG | 0.517712 | 4.2:-188197 | MS.gene93748:CDS |
| ACTGATTACTGCAAAAGTGC+TGG | 0.520458 | 4.2:-184505 | MS.gene93748:CDS |
| ACAATGAAATTGTGGAGAGA+TGG | 0.523489 | 4.2:-183981 | MS.gene93748:CDS |
| AGAATTTGCTGAATACATCA+AGG | 0.524867 | 4.2:-184470 | MS.gene93748:CDS |
| GATTTGCTGGATATGGCAAA+AGG | 0.528860 | 4.2:-186423 | MS.gene93748:CDS |
| GATGTATCTTTCAGATAATG+AGG | 0.530422 | 4.2:-187852 | MS.gene93748:intron |
| CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 4.2:-188114 | MS.gene93748:intron |
| TCCTTCATATTCTGGTAGCA+GGG | 0.535206 | 4.2:+188223 | None:intergenic |
| GCCATATGAGTGATATCTCT+GGG | 0.536166 | 4.2:-186620 | MS.gene93748:CDS |
| CATAATACCTGGTGAAGCCA+TGG | 0.538535 | 4.2:+189134 | None:intergenic |
| TGATGTCACCTCTCCAAAGA+TGG | 0.540164 | 4.2:-187921 | MS.gene93748:CDS |
| AAGCAGATCAGGGGTGAACG+AGG | 0.552850 | 4.2:-183952 | MS.gene93748:CDS |
| ATGGAAGGCGAAGCAGATCA+GGG | 0.557359 | 4.2:-183962 | MS.gene93748:CDS |
| TATGAGCGCGTGTATGGCCA+AGG | 0.560692 | 4.2:-186326 | MS.gene93748:CDS |
| GCTAAGCTGGAACTAAAGCC+TGG | 0.561514 | 4.2:-185277 | MS.gene93748:CDS |
| TGGCGGAGGTGATTTCTACA+TGG | 0.570395 | 4.2:-185224 | MS.gene93748:CDS |
| CCAAAGATGGATGTTTCTGA+AGG | 0.571313 | 4.2:-187908 | MS.gene93748:CDS |
| ATGAAATGGTTGAAAGATGG+TGG | 0.574449 | 4.2:-187220 | MS.gene93748:CDS |
| CTGGGTTCCCTGTAGTGAGT+AGG | 0.586374 | 4.2:+187136 | None:intergenic |
| TGGATTTGATGTCATTGTTG+AGG | 0.596748 | 4.2:-184287 | MS.gene93748:CDS |
| GATAGCACGTTCAATAGCAC+GGG | 0.597140 | 4.2:+185147 | None:intergenic |
| ATGATGAAATGGTTGAAAGA+TGG | 0.599340 | 4.2:-187223 | MS.gene93748:CDS |
| ACATCCAGTACTTTCTGACC+AGG | 0.599476 | 4.2:+185259 | None:intergenic |
| GAACGAGGGGAGCAGAAGTG+GGG | 0.600599 | 4.2:-183937 | MS.gene93748:CDS |
| GGATGACTACAATGAAATTG+TGG | 0.600685 | 4.2:-183989 | MS.gene93748:CDS |
| CGATAGCACGTTCAATAGCA+CGG | 0.601134 | 4.2:+185146 | None:intergenic |
| AGAAACATCCATCTTTGGAG+AGG | 0.608120 | 4.2:+187913 | None:intergenic |
| GCAGATCAGGGGTGAACGAG+GGG | 0.609433 | 4.2:-183950 | MS.gene93748:CDS |
| TTTGCTGAATACATCAAGGA+AGG | 0.610174 | 4.2:-184466 | MS.gene93748:CDS |
| AGCAGATCAGGGGTGAACGA+GGG | 0.610403 | 4.2:-183951 | MS.gene93748:CDS |
| TGACATGAAAGAATACGAGC+AGG | 0.615612 | 4.2:-184428 | MS.gene93748:intron |
| CAAGGCTTTATTAGCACTGG+AGG | 0.615635 | 4.2:-186308 | MS.gene93748:CDS |
| CAAAGCTTCTGATCTCGACA+AGG | 0.622617 | 4.2:-188943 | MS.gene93748:CDS |
| AAATAAGAAGAATCAAAACC+AGG | 0.627133 | 4.2:-186544 | MS.gene93748:intron |
| GGTCAGAAAGTACTGGATGT+TGG | 0.630821 | 4.2:-185256 | MS.gene93748:CDS |
| ATCCTGTTTCCACCAATCTG+GGG | 0.633940 | 4.2:-187179 | MS.gene93748:CDS |
| TGAAATTGTGGAGAGATGGA+AGG | 0.635643 | 4.2:-183977 | MS.gene93748:CDS |
| GTTAGATCACATGATGATAG+GGG | 0.637701 | 4.2:-186401 | MS.gene93748:CDS |
| TTGTGCTGATCTCTCTGTCG+AGG | 0.638294 | 4.2:-188982 | MS.gene93748:CDS |
| TACAAGTGGTTGAAACCTGG+AGG | 0.640796 | 4.2:-184541 | MS.gene93748:CDS |
| AATTGCTCTCGAGAGCCAGA+AGG | 0.643480 | 4.2:-184129 | MS.gene93748:CDS |
| AAAGTACTGGATGTTGGTTG+TGG | 0.647499 | 4.2:-185250 | MS.gene93748:CDS |
| TCCCTGCTACCAGAATATGA+AGG | 0.647755 | 4.2:-188224 | MS.gene93748:CDS |
| GCTGAATACATCAAGGAAGG+AGG | 0.652193 | 4.2:-184463 | MS.gene93748:CDS |
| GCCCACAAGAGAAAGCTCAA+AGG | 0.655286 | 4.2:+186593 | None:intergenic |
| TTCTTGGGCAGAAACGACAA+AGG | 0.658742 | 4.2:-185308 | MS.gene93748:intron |
| TTACAATCCTACTCACTACA+GGG | 0.660434 | 4.2:-187143 | MS.gene93748:CDS |
| GGGAAATCACATTTATGGAG+AGG | 0.665644 | 4.2:+185167 | None:intergenic |
| TGGAAGGCGAAGCAGATCAG+GGG | 0.665972 | 4.2:-183961 | MS.gene93748:CDS |
| CGACAAGGAAGAAAGACCTG+AGG | 0.732813 | 4.2:-188928 | MS.gene93748:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTAAAACATATTGAT+TGG | - | chr4.2:187293-187312 | MS.gene93748:intron | 10.0% |
| !!! | AAGAATTATTTTCATTTTAT+AGG | - | chr4.2:184300-184319 | MS.gene93748:CDS | 10.0% |
| !!! | AGAATTATTTTCATTTTATA+GGG | - | chr4.2:184301-184320 | MS.gene93748:CDS | 10.0% |
| !!! | ATTATCATTACATTTTATTT+TGG | - | chr4.2:187032-187051 | MS.gene93748:intron | 10.0% |
| !!! | TTTTTTTTTTCTTTTCAATT+CGG | - | chr4.2:185261-185280 | MS.gene93748:CDS | 10.0% |
| !! | AAAACAAAATGAAATGAAAA+AGG | + | chr4.2:184721-184740 | None:intergenic | 15.0% |
| !! | GTAAATAAAAAAATCAACTT+TGG | - | chr4.2:185364-185383 | MS.gene93748:intron | 15.0% |
| !! | TAAAATGATCTAAATAATGT+TGG | + | chr4.2:188485-188504 | None:intergenic | 15.0% |
| !! | TAAATTAAAACCAAATGAAT+CGG | + | chr4.2:184442-184461 | None:intergenic | 15.0% |
| !! | TTTGTTTAATCTCAATTATT+GGG | - | chr4.2:185516-185535 | MS.gene93748:intron | 15.0% |
| !!! | AATCAAAGCTTTTAAATTAA+GGG | + | chr4.2:189028-189047 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATACTTTATTTT+AGG | - | chr4.2:188993-189012 | MS.gene93748:CDS | 15.0% |
| !!! | TTTTGTTTAATCTCAATTAT+TGG | - | chr4.2:185515-185534 | MS.gene93748:intron | 15.0% |
| !!! | TTTTTAATCAAACAATAATC+TGG | + | chr4.2:185985-186004 | None:intergenic | 15.0% |
| !! | AAAATAATTCTTAACATCCA+CGG | + | chr4.2:184292-184311 | None:intergenic | 20.0% |
| !! | AATAACATTTACGAGTAATA+AGG | + | chr4.2:188226-188245 | None:intergenic | 20.0% |
| !! | AATGAAAAGGTAGAAAATAT+TGG | + | chr4.2:186981-187000 | None:intergenic | 20.0% |
| !! | AATTATTATGTAATTGTACC+TGG | - | chr4.2:187155-187174 | MS.gene93748:CDS | 20.0% |
| !! | ACTAGAATAATTATTTGCAA+TGG | + | chr4.2:185484-185503 | None:intergenic | 20.0% |
| !! | TCATTATTATTACGACATTA+AGG | + | chr4.2:183970-183989 | None:intergenic | 20.0% |
| !! | TTAACATGTTCTTAAATTCA+CGG | + | chr4.2:185428-185447 | None:intergenic | 20.0% |
| !! | TTGTTTAATCTCAATTATTG+GGG | - | chr4.2:185517-185536 | MS.gene93748:intron | 20.0% |
| !!! | AGCTGTTTTATTTAATCAAA+AGG | + | chr4.2:186068-186087 | None:intergenic | 20.0% |
| !!! | ATAATTTTACTCAAACAAAC+TGG | - | chr4.2:184640-184659 | MS.gene93748:intron | 20.0% |
| !!! | ATTTTGATCAATCATTTTGT+TGG | - | chr4.2:188325-188344 | MS.gene93748:intron | 20.0% |
| !!! | ATTTTGATTAGACTATGAAT+TGG | + | chr4.2:184588-184607 | None:intergenic | 20.0% |
| !!! | CAAATTTTATGGAAATATGT+GGG | + | chr4.2:184678-184697 | None:intergenic | 20.0% |
| !!! | CAATCAAAGCTTTTAAATTA+AGG | + | chr4.2:189029-189048 | None:intergenic | 20.0% |
| !!! | TATTTAGATCATTTTACAAG+TGG | - | chr4.2:188489-188508 | MS.gene93748:intron | 20.0% |
| !!! | TCATATAATTTTTTAGAGCA+TGG | - | chr4.2:187472-187491 | MS.gene93748:intron | 20.0% |
| !!! | TCATTGGATTATATTTTGTA+AGG | - | chr4.2:186292-186311 | MS.gene93748:intron | 20.0% |
| !!! | TGTGTACAATAATATTTTCA+TGG | - | chr4.2:186594-186613 | MS.gene93748:CDS | 20.0% |
| ! | AAAAAGATTGACATCAACTT+TGG | - | chr4.2:186002-186021 | MS.gene93748:intron | 25.0% |
| ! | AAAAGATTGACATCAACTTT+GGG | - | chr4.2:186003-186022 | MS.gene93748:intron | 25.0% |
| ! | AAAGAAAAGAAAACCAAGTA+TGG | + | chr4.2:187628-187647 | None:intergenic | 25.0% |
| ! | AAATAAGAAGAATCAAAACC+AGG | - | chr4.2:186500-186519 | MS.gene93748:intron | 25.0% |
| ! | AAATAATTCTTAACATCCAC+GGG | + | chr4.2:184291-184310 | None:intergenic | 25.0% |
| ! | AAATCCAGAATTCTTCTTAA+TGG | + | chr4.2:188303-188322 | None:intergenic | 25.0% |
| ! | AACAATAACAATTCTCAGAA+TGG | + | chr4.2:184972-184991 | None:intergenic | 25.0% |
| ! | ACATGTTTGAACCTAATTAA+CGG | - | chr4.2:186093-186112 | MS.gene93748:intron | 25.0% |
| ! | AGCTTAAGATGATAATATGA+TGG | + | chr4.2:184238-184257 | None:intergenic | 25.0% |
| ! | AGTGTATGATTTCTATCTTA+TGG | - | chr4.2:186034-186053 | MS.gene93748:intron | 25.0% |
| ! | ATTAAGAAATGTGAAAGATG+AGG | + | chr4.2:184149-184168 | None:intergenic | 25.0% |
| ! | CAAATTATAAGTGTATAGTG+TGG | + | chr4.2:185699-185718 | None:intergenic | 25.0% |
| ! | CACACTATACACTTATAATT+TGG | - | chr4.2:185697-185716 | MS.gene93748:intron | 25.0% |
| ! | CATTACACGATAATTATAAG+AGG | + | chr4.2:187115-187134 | None:intergenic | 25.0% |
| ! | GATATTGCAAAGAGAAAATT+AGG | + | chr4.2:184534-184553 | None:intergenic | 25.0% |
| ! | GGTATGATATATCAGATTAA+TGG | + | chr4.2:184400-184419 | None:intergenic | 25.0% |
| ! | TAAAAGAATACCTAAACTCT+AGG | - | chr4.2:188172-188191 | MS.gene93748:CDS | 25.0% |
| ! | TAAGAGGAAGAATAATCAAA+TGG | + | chr4.2:187099-187118 | None:intergenic | 25.0% |
| ! | TACAAAGTACAGACATAAAA+AGG | + | chr4.2:188362-188381 | None:intergenic | 25.0% |
| ! | TAGCAAAAAGAATGATGAAA+TGG | - | chr4.2:185810-185829 | MS.gene93748:intron | 25.0% |
| ! | TTAACAAAACATGACTTAGT+TGG | - | chr4.2:185736-185755 | MS.gene93748:intron | 25.0% |
| ! | TTATGAGTTGCTTAATTCTT+GGG | - | chr4.2:187721-187740 | MS.gene93748:intron | 25.0% |
| ! | TTGCAAGCAAATTAAACTAT+TGG | - | chr4.2:188264-188283 | MS.gene93748:intron | 25.0% |
| ! | TTGTACTAAATAGCATATTG+CGG | - | chr4.2:185647-185666 | MS.gene93748:intron | 25.0% |
| !! | AATAACTTCATTGTTACTTG+TGG | - | chr4.2:188859-188878 | MS.gene93748:intron | 25.0% |
| !! | GCAAATTTTATGGAAATATG+TGG | + | chr4.2:184679-184698 | None:intergenic | 25.0% |
| !! | TCGTAAATGTTATTCCTTTT+CGG | - | chr4.2:188232-188251 | MS.gene93748:CDS | 25.0% |
| !! | TCTAACATGTTAATTTGAAG+CGG | + | chr4.2:186791-186810 | None:intergenic | 25.0% |
| !! | TTGATGTGATTTTCTCAAAT+TGG | - | chr4.2:185164-185183 | MS.gene93748:CDS | 25.0% |
| !! | TTTTCTACCTTTTCATTCTT+TGG | - | chr4.2:186984-187003 | MS.gene93748:intron | 25.0% |
| !!! | CTTTTCAATTTTCAAGCTAT+TGG | - | chr4.2:187252-187271 | MS.gene93748:intron | 25.0% |
| !!! | TAAAAGCTTTGATTGTTTTC+AGG | - | chr4.2:189034-189053 | MS.gene93748:CDS | 25.0% |
| AAAAGAACTTAACCTTGATC+AGG | + | chr4.2:187673-187692 | None:intergenic | 30.0% | |
| AAACTTCCACACTTATACTT+TGG | - | chr4.2:184505-184524 | MS.gene93748:CDS | 30.0% | |
| AAAGAGAGTAAGACAACAAA+CGG | + | chr4.2:188643-188662 | None:intergenic | 30.0% | |
| AACATTTACGAGTAATAAGG+TGG | + | chr4.2:188223-188242 | None:intergenic | 30.0% | |
| ACAAACCTTTGTGTAAAATC+TGG | + | chr4.2:185930-185949 | None:intergenic | 30.0% | |
| ACATGTATACATCAGTCAAT+TGG | + | chr4.2:186577-186596 | None:intergenic | 30.0% | |
| ATCAAAGTTACCAAACCAAA+AGG | + | chr4.2:186327-186346 | None:intergenic | 30.0% | |
| ATGAATACAAAAGCAATGTC+TGG | + | chr4.2:184763-184782 | None:intergenic | 30.0% | |
| ATGATGAAATGGTTGAAAGA+TGG | - | chr4.2:185821-185840 | MS.gene93748:intron | 30.0% | |
| ATGTATGATTGTATGAACTG+TGG | - | chr4.2:185303-185322 | MS.gene93748:intron | 30.0% | |
| ATTATAAGTGTATAGTGTGG+CGG | + | chr4.2:185696-185715 | None:intergenic | 30.0% | |
| ATTTCAAGATACGATCCAAA+TGG | + | chr4.2:187523-187542 | None:intergenic | 30.0% | |
| CAAACCTTTGTGTAAAATCT+GGG | + | chr4.2:185929-185948 | None:intergenic | 30.0% | |
| CACAAACAAATACATCCATT+TGG | - | chr4.2:187505-187524 | MS.gene93748:intron | 30.0% | |
| CATGTTTGAACCTAATTAAC+GGG | - | chr4.2:186094-186113 | MS.gene93748:intron | 30.0% | |
| CTATATTAAGTGATAAGCAG+CGG | + | chr4.2:187561-187580 | None:intergenic | 30.0% | |
| CTTATGAGTTGCTTAATTCT+TGG | - | chr4.2:187720-187739 | MS.gene93748:intron | 30.0% | |
| GATGTATCTTTCAGATAATG+AGG | - | chr4.2:185192-185211 | MS.gene93748:CDS | 30.0% | |
| GATTAGACTATGAATTGGAT+TGG | + | chr4.2:184583-184602 | None:intergenic | 30.0% | |
| GTGAAATTCAGAAATCATAC+TGG | - | chr4.2:184031-184050 | MS.gene93748:intron | 30.0% | |
| TAAGTGTGGAAGTTTGAAAA+CGG | + | chr4.2:184500-184519 | None:intergenic | 30.0% | |
| TTAAATACCTGCATGAACAA+AGG | + | chr4.2:186399-186418 | None:intergenic | 30.0% | |
| TTAAGTTACTAAGCAAAGCA+TGG | - | chr4.2:185444-185463 | MS.gene93748:intron | 30.0% | |
| TTCTCTTTGCAATATCAACA+AGG | - | chr4.2:184538-184557 | MS.gene93748:CDS | 30.0% | |
| ! | AATTAAACTATTGGTCTCGT+TGG | - | chr4.2:188273-188292 | MS.gene93748:intron | 30.0% |
| ! | ACAGATTTTCCTTCATATTC+TGG | + | chr4.2:184832-184851 | None:intergenic | 30.0% |
| ! | ACATTGACAGGCAAATTTTA+TGG | + | chr4.2:184689-184708 | None:intergenic | 30.0% |
| ! | GTAAGGCAAATAATACCTTT+TGG | - | chr4.2:186309-186328 | MS.gene93748:CDS | 30.0% |
| ! | TATTCAGCAAATTCTGAAGA+TGG | + | chr4.2:188569-188588 | None:intergenic | 30.0% |
| ! | TCTAGTAATTACAAGGTGTT+AGG | - | chr4.2:186863-186882 | MS.gene93748:intron | 30.0% |
| ! | TGATAATATGATGGTGCAAT+TGG | + | chr4.2:184229-184248 | None:intergenic | 30.0% |
| !! | AATTTTGATGTTGAGGTTGT+TGG | - | chr4.2:187848-187867 | MS.gene93748:intron | 30.0% |
| !! | AGAATTTGCTGAATACATCA+AGG | - | chr4.2:188574-188593 | MS.gene93748:intron | 30.0% |
| !! | CAATCATTTTGTTGGCTAAA+GGG | - | chr4.2:188333-188352 | MS.gene93748:intron | 30.0% |
| !! | GCAAATAATACCTTTTGGTT+TGG | - | chr4.2:186314-186333 | MS.gene93748:CDS | 30.0% |
| !! | TCAATCATTTTGTTGGCTAA+AGG | - | chr4.2:188332-188351 | MS.gene93748:intron | 30.0% |
| !!! | CTTCTCAGGATATGTTTTTT+TGG | + | chr4.2:187963-187982 | None:intergenic | 30.0% |
| !!! | GGTTGCTTTTCCAAATTTTA+CGG | - | chr4.2:186154-186173 | MS.gene93748:intron | 30.0% |
| !!! | TTTAATCCTGCTTTTTTACC+TGG | + | chr4.2:186521-186540 | None:intergenic | 30.0% |
| AAATGTGAAAGATGAGGAGA+CGG | + | chr4.2:184143-184162 | None:intergenic | 35.0% | |
| AAGTGTGGAAGTTTGAAAAC+GGG | + | chr4.2:184499-184518 | None:intergenic | 35.0% | |
| ACAAAACACTCCCGTTAATT+AGG | + | chr4.2:186107-186126 | None:intergenic | 35.0% | |
| ACAATGAAATTGTGGAGAGA+TGG | - | chr4.2:189063-189082 | MS.gene93748:intron | 35.0% | |
| ACGAGTGTAGATTACATCAT+AGG | + | chr4.2:187987-188006 | None:intergenic | 35.0% | |
| AGAATCTATCATCCTGATCA+AGG | - | chr4.2:187658-187677 | MS.gene93748:intron | 35.0% | |
| AGGTTAGATCACATGATGAT+AGG | - | chr4.2:186641-186660 | MS.gene93748:intron | 35.0% | |
| AGTGTCAGCTGAAATCAAAT+GGG | + | chr4.2:188668-188687 | None:intergenic | 35.0% | |
| AGTTAATGTTGAGCACTCAT+TGG | - | chr4.2:186276-186295 | MS.gene93748:intron | 35.0% | |
| ATACTTCAATACTAGCAACC+AGG | + | chr4.2:187176-187195 | None:intergenic | 35.0% | |
| ATCAGTGATTTCAGCAATGT+GGG | - | chr4.2:188946-188965 | MS.gene93748:CDS | 35.0% | |
| ATGAAATGGTTGAAAGATGG+TGG | - | chr4.2:185824-185843 | MS.gene93748:intron | 35.0% | |
| ATGATATGTTGCTCTTAGAC+TGG | - | chr4.2:187589-187608 | MS.gene93748:intron | 35.0% | |
| ATTACAATCCTACTCACTAC+AGG | - | chr4.2:185900-185919 | MS.gene93748:intron | 35.0% | |
| ATTACATCATAGGTCTTCTC+AGG | + | chr4.2:187977-187996 | None:intergenic | 35.0% | |
| ATTCCAAGCAATTGTTACAG+AGG | + | chr4.2:188153-188172 | None:intergenic | 35.0% | |
| ATTGAAGTTACCAAACCAAC+AGG | + | chr4.2:186367-186386 | None:intergenic | 35.0% | |
| CAAATGAATCGGCTACTAAA+TGG | + | chr4.2:184431-184450 | None:intergenic | 35.0% | |
| CAACAATGAGTATCAAAGCT+AGG | + | chr4.2:187390-187409 | None:intergenic | 35.0% | |
| CAACTCTATCTAAGAACTTC+TGG | + | chr4.2:186672-186691 | None:intergenic | 35.0% | |
| CCATGCTATACATCAAAGTA+AGG | - | chr4.2:188011-188030 | MS.gene93748:intron | 35.0% | |
| CCTTACTTTGATGTATAGCA+TGG | + | chr4.2:188014-188033 | None:intergenic | 35.0% | |
| CTCTCCATTAAGAAGAATTC+TGG | - | chr4.2:188296-188315 | MS.gene93748:intron | 35.0% | |
| GAGTACATTGCAGAATACAA+AGG | + | chr4.2:188442-188461 | None:intergenic | 35.0% | |
| GCGGAGAAAGGAAAATATAA+AGG | + | chr4.2:186772-186791 | None:intergenic | 35.0% | |
| GGAAAATCTGTTATTGAGCT+TGG | - | chr4.2:184841-184860 | MS.gene93748:intron | 35.0% | |
| GGATGACTACAATGAAATTG+TGG | - | chr4.2:189055-189074 | MS.gene93748:intron | 35.0% | |
| GGTTAGATCACATGATGATA+GGG | - | chr4.2:186642-186661 | MS.gene93748:intron | 35.0% | |
| GTAACTGTAAGCATGAATGA+AGG | - | chr4.2:188101-188120 | MS.gene93748:intron | 35.0% | |
| GTTAGATCACATGATGATAG+GGG | - | chr4.2:186643-186662 | MS.gene93748:intron | 35.0% | |
| TACCTGGTCTAGTAATTACA+AGG | - | chr4.2:186856-186875 | MS.gene93748:intron | 35.0% | |
| TAGTGTCAGCTGAAATCAAA+TGG | + | chr4.2:188669-188688 | None:intergenic | 35.0% | |
| TATCTTCTATCAGTGCTTTG+TGG | - | chr4.2:185399-185418 | MS.gene93748:intron | 35.0% | |
| TCAAAACCAGGTAAAAAAGC+AGG | - | chr4.2:186512-186531 | MS.gene93748:intron | 35.0% | |
| TCAAAGCTAGGCATTTCAAA+AGG | + | chr4.2:187378-187397 | None:intergenic | 35.0% | |
| TCACTTTCAACCTAGAGTTT+AGG | + | chr4.2:188185-188204 | None:intergenic | 35.0% | |
| TGGATTTGATGTCATTGTTG+AGG | - | chr4.2:188757-188776 | MS.gene93748:intron | 35.0% | |
| TTACAATCCTACTCACTACA+GGG | - | chr4.2:185901-185920 | MS.gene93748:intron | 35.0% | |
| TTACTGTCAATTGGAACCAT+GGG | + | chr4.2:185337-185356 | None:intergenic | 35.0% | |
| TTGAAGTTACCAAACCAACA+GGG | + | chr4.2:186366-186385 | None:intergenic | 35.0% | |
| TTGTAGTTATCTCTATCCCT+TGG | - | chr4.2:185953-185972 | MS.gene93748:intron | 35.0% | |
| TTGTATTCTGCAATGTACTC+TGG | - | chr4.2:188442-188461 | MS.gene93748:intron | 35.0% | |
| TTTACGAGTAATAAGGTGGA+TGG | + | chr4.2:188219-188238 | None:intergenic | 35.0% | |
| TTTACTGTCAATTGGAACCA+TGG | + | chr4.2:185338-185357 | None:intergenic | 35.0% | |
| TTTCCCAATGCTGTTAAACA+CGG | - | chr4.2:185554-185573 | MS.gene93748:intron | 35.0% | |
| TTTGCTGAATACATCAAGGA+AGG | - | chr4.2:188578-188597 | MS.gene93748:intron | 35.0% | |
| ! | ACAGCTTGTTTACTGTCAAT+TGG | + | chr4.2:185346-185365 | None:intergenic | 35.0% |
| ! | ACTCTAGGTTGAAAGTGATT+TGG | - | chr4.2:188187-188206 | MS.gene93748:CDS | 35.0% |
| ! | ATCAGGTTTGTTTGATCCTT+TGG | - | chr4.2:188789-188808 | MS.gene93748:intron | 35.0% |
| ! | CAAATAATACCCTGTTGGTT+TGG | - | chr4.2:186354-186373 | MS.gene93748:CDS | 35.0% |
| ! | CATTGAGAGTGCAATAAAGA+AGG | - | chr4.2:184930-184949 | MS.gene93748:intron | 35.0% |
| ! | CATTTAGTAGCCGATTCATT+TGG | - | chr4.2:184429-184448 | MS.gene93748:CDS | 35.0% |
| ! | GATTCGCATTTCAATTTTGC+AGG | - | chr4.2:183988-184007 | MS.gene93748:CDS | 35.0% |
| ! | GCTTTTCCAAATTTTACGGT+TGG | - | chr4.2:186158-186177 | MS.gene93748:intron | 35.0% |
| ! | GTTTGGTAACTTTGATCTGT+AGG | - | chr4.2:186331-186350 | MS.gene93748:CDS | 35.0% |
| ! | TGTTAATTTGAAGCGGAGAA+AGG | + | chr4.2:186784-186803 | None:intergenic | 35.0% |
| ! | TGTTTTGTGATGGTAAAGGT+GGG | - | chr4.2:186119-186138 | MS.gene93748:intron | 35.0% |
| ! | TTTTACAAGTGGTTGAAACC+TGG | - | chr4.2:188500-188519 | MS.gene93748:intron | 35.0% |
| !! | CTGTAGAACGAAAGCATTAA+CGG | - | chr4.2:185070-185089 | MS.gene93748:CDS | 35.0% |
| !! | CTTTTCATTCTTTGGTGACT+GGG | - | chr4.2:186992-187011 | MS.gene93748:intron | 35.0% |
| !! | GAATTGGATTGGTGCATTAT+TGG | + | chr4.2:184572-184591 | None:intergenic | 35.0% |
| !! | GGCTGAAAATTTTGATGTTG+AGG | - | chr4.2:187841-187860 | MS.gene93748:intron | 35.0% |
| !! | TTTTCATTCTTTGGTGACTG+GGG | - | chr4.2:186993-187012 | MS.gene93748:intron | 35.0% |
| !!! | ACTGCTGTGTTTTTAGGTAA+GGG | + | chr4.2:186895-186914 | None:intergenic | 35.0% |
| !!! | CTAACCTTTTGTTTTTCCCT+TGG | - | chr4.2:185769-185788 | MS.gene93748:intron | 35.0% |
| AAAGGAACTTGTAGCTAAGC+TGG | - | chr4.2:187754-187773 | MS.gene93748:intron | 40.0% | |
| AATAATCTGGCAGAGACCAA+GGG | + | chr4.2:185972-185991 | None:intergenic | 40.0% | |
| AATCCTGTTTCCACCAATCT+GGG | - | chr4.2:185864-185883 | MS.gene93748:intron | 40.0% | |
| ACGTGTGCACAAGAAATAGT+TGG | - | chr4.2:186955-186974 | MS.gene93748:intron | 40.0% | |
| ACTATAGCACTGTTGTGTAG+TGG | + | chr4.2:185599-185618 | None:intergenic | 40.0% | |
| AGCACCAAGGGAAAAACAAA+AGG | + | chr4.2:185776-185795 | None:intergenic | 40.0% | |
| AGCACGGGAAATCACATTTA+TGG | + | chr4.2:187885-187904 | None:intergenic | 40.0% | |
| AGCATATTGCGGAACAATAG+TGG | - | chr4.2:185658-185677 | MS.gene93748:intron | 40.0% | |
| AGGAGTCCAAAGTATAAGTG+TGG | + | chr4.2:184514-184533 | None:intergenic | 40.0% | |
| AGGTACGTAATGACATTGAC+AGG | + | chr4.2:184701-184720 | None:intergenic | 40.0% | |
| AGTGTGGAAGTTTGAAAACG+GGG | + | chr4.2:184498-184517 | None:intergenic | 40.0% | |
| ATTGGTGGAAACAGGATTCT+CGG | + | chr4.2:185862-185881 | None:intergenic | 40.0% | |
| CAAGCAATTGTTACAGAGGA+AGG | + | chr4.2:188149-188168 | None:intergenic | 40.0% | |
| CACCTTGTAATTACTAGACC+AGG | + | chr4.2:186861-186880 | None:intergenic | 40.0% | |
| CATCAGTGATTTCAGCAATG+TGG | - | chr4.2:188945-188964 | MS.gene93748:CDS | 40.0% | |
| CATTGCAGAATACAAAGGTC+AGG | + | chr4.2:188437-188456 | None:intergenic | 40.0% | |
| CCAGTCACCAAAGAATGAAA+AGG | + | chr4.2:186994-187013 | None:intergenic | 40.0% | |
| CCTTCAGAAACATCCATCTT+TGG | + | chr4.2:185139-185158 | None:intergenic | 40.0% | |
| CTAGACCAGGTAAATGACAA+CGG | + | chr4.2:186848-186867 | None:intergenic | 40.0% | |
| CTTACAGTTACATACACCTG+GGG | + | chr4.2:188092-188111 | None:intergenic | 40.0% | |
| CTTCCTCTGTAACAATTGCT+TGG | - | chr4.2:188147-188166 | MS.gene93748:CDS | 40.0% | |
| GAGACACCAACCGTAAAATT+TGG | + | chr4.2:186167-186186 | None:intergenic | 40.0% | |
| GCCATATGAGTGATATCTCT+GGG | - | chr4.2:186424-186443 | MS.gene93748:CDS | 40.0% | |
| GCTCGTATTCTTTCATGTCA+TGG | + | chr4.2:188616-188635 | None:intergenic | 40.0% | |
| GCTTACAGTTACATACACCT+GGG | + | chr4.2:188093-188112 | None:intergenic | 40.0% | |
| GGCTACTAAATGGTAGATGA+TGG | + | chr4.2:184421-184440 | None:intergenic | 40.0% | |
| GGGAAATCACATTTATGGAG+AGG | + | chr4.2:187880-187899 | None:intergenic | 40.0% | |
| GTAATTAGAAGTTGACCTCC+AGG | + | chr4.2:188521-188540 | None:intergenic | 40.0% | |
| GTAGGCAAATAATACCCTGT+TGG | - | chr4.2:186349-186368 | MS.gene93748:CDS | 40.0% | |
| GTTCTACAGAACGTTATGAG+TGG | + | chr4.2:185059-185078 | None:intergenic | 40.0% | |
| TACCAAGCAAACTAGACCAA+AGG | + | chr4.2:188808-188827 | None:intergenic | 40.0% | |
| TACCCGTGTTTAACAGCATT+GGG | + | chr4.2:185560-185579 | None:intergenic | 40.0% | |
| TCCCAGAGATATCACTCATA+TGG | + | chr4.2:186428-186447 | None:intergenic | 40.0% | |
| TCCGGTAAATCTTCCAATAC+CGG | + | chr4.2:184869-184888 | None:intergenic | 40.0% | |
| TCCTTCATATTCTGGTAGCA+GGG | + | chr4.2:184824-184843 | None:intergenic | 40.0% | |
| TCCTTTGAGCTTTCTCTTGT+GGG | - | chr4.2:186450-186469 | MS.gene93748:intron | 40.0% | |
| TGAAATTGTGGAGAGATGGA+AGG | - | chr4.2:189067-189086 | MS.gene93748:intron | 40.0% | |
| TGACATGAAAGAATACGAGC+AGG | - | chr4.2:188616-188635 | MS.gene93748:intron | 40.0% | |
| TGAGTGAGTGACATAATACC+TGG | + | chr4.2:183924-183943 | None:intergenic | 40.0% | |
| TGCAAGTGTAAGAACCGAAA+AGG | + | chr4.2:188249-188268 | None:intergenic | 40.0% | |
| TGCATGAACAAAGGAGAAGA+CGG | + | chr4.2:186390-186409 | None:intergenic | 40.0% | |
| TGCATGTATGATGCCATACT+TGG | - | chr4.2:187612-187631 | MS.gene93748:intron | 40.0% | |
| TGCCATATGAGTGATATCTC+TGG | - | chr4.2:186423-186442 | MS.gene93748:CDS | 40.0% | |
| TGCTTACAGTTACATACACC+TGG | + | chr4.2:188094-188113 | None:intergenic | 40.0% | |
| TGGAAGATTTACCGGAGAAT+TGG | - | chr4.2:184873-184892 | MS.gene93748:intron | 40.0% | |
| TTCCCAATGCTGTTAAACAC+GGG | - | chr4.2:185555-185574 | MS.gene93748:intron | 40.0% | |
| TTCCTTCATATTCTGGTAGC+AGG | + | chr4.2:184825-184844 | None:intergenic | 40.0% | |
| TTCCTTTGAGCTTTCTCTTG+TGG | - | chr4.2:186449-186468 | MS.gene93748:intron | 40.0% | |
| TTCTCTTTGAATCCCCAGAT+TGG | + | chr4.2:185880-185899 | None:intergenic | 40.0% | |
| ! | ACTGATTACTGCAAAAGTGC+TGG | - | chr4.2:188539-188558 | MS.gene93748:intron | 40.0% |
| ! | AGAAACATCCATCTTTGGAG+AGG | + | chr4.2:185134-185153 | None:intergenic | 40.0% |
| ! | ATGTTCCGTTGTCATTTACC+TGG | - | chr4.2:186840-186859 | MS.gene93748:intron | 40.0% |
| ! | CAGCAGATTTAGAACACAAG+GGG | + | chr4.2:188720-188739 | None:intergenic | 40.0% |
| ! | CCAAAGATGGATGTTTCTGA+AGG | - | chr4.2:185136-185155 | MS.gene93748:CDS | 40.0% |
| ! | GCAGCAGATTTAGAACACAA+GGG | + | chr4.2:188721-188740 | None:intergenic | 40.0% |
| ! | GGAACCCAGATTTTACACAA+AGG | - | chr4.2:185922-185941 | MS.gene93748:intron | 40.0% |
| ! | GTGTTTTGTGATGGTAAAGG+TGG | - | chr4.2:186118-186137 | MS.gene93748:intron | 40.0% |
| ! | TGCAGCAGATTTAGAACACA+AGG | + | chr4.2:188722-188741 | None:intergenic | 40.0% |
| ! | TTTATTAGCACTGGAGGACT+TGG | - | chr4.2:186742-186761 | MS.gene93748:intron | 40.0% |
| ! | TTTTCATGGTGCAGATTTGC+TGG | - | chr4.2:186608-186627 | MS.gene93748:CDS | 40.0% |
| !! | AAAGTACTGGATGTTGGTTG+TGG | - | chr4.2:187794-187813 | MS.gene93748:intron | 40.0% |
| !! | ATCCTTTGGTCTAGTTTGCT+TGG | - | chr4.2:188803-188822 | MS.gene93748:intron | 40.0% |
| !! | ATGTACTCTGGATTTGTTGC+AGG | - | chr4.2:188454-188473 | MS.gene93748:intron | 40.0% |
| !! | CCTTTTCATTCTTTGGTGAC+TGG | - | chr4.2:186991-187010 | MS.gene93748:intron | 40.0% |
| !! | GATTTGCTGGATATGGCAAA+AGG | - | chr4.2:186621-186640 | MS.gene93748:CDS | 40.0% |
| !! | GGAGTGTTTTGTGATGGTAA+AGG | - | chr4.2:186115-186134 | MS.gene93748:intron | 40.0% |
| !!! | GACTGCTGTGTTTTTAGGTA+AGG | + | chr4.2:186896-186915 | None:intergenic | 40.0% |
| !!! | TTAACGGGAGTGTTTTGTGA+TGG | - | chr4.2:186109-186128 | MS.gene93748:intron | 40.0% |
| AACTGTGGAGTAATTGCCCA+TGG | - | chr4.2:185318-185337 | MS.gene93748:intron | 45.0% | |
| ACATCCAGTACTTTCTGACC+AGG | + | chr4.2:187788-187807 | None:intergenic | 45.0% | |
| ATCCTGTTTCCACCAATCTG+GGG | - | chr4.2:185865-185884 | MS.gene93748:intron | 45.0% | |
| ATGCTGTTAAACACGGGTAG+TGG | - | chr4.2:185561-185580 | MS.gene93748:intron | 45.0% | |
| CAAAGCTTCTGATCTCGACA+AGG | - | chr4.2:184101-184120 | MS.gene93748:intron | 45.0% | |
| CAATAATCTGGCAGAGACCA+AGG | + | chr4.2:185973-185992 | None:intergenic | 45.0% | |
| CGATAGCACGTTCAATAGCA+CGG | + | chr4.2:187901-187920 | None:intergenic | 45.0% | |
| CTACCCGTGTTTAACAGCAT+TGG | + | chr4.2:185561-185580 | None:intergenic | 45.0% | |
| CTCCAGTGCTAATAAAGCCT+TGG | + | chr4.2:186738-186757 | None:intergenic | 45.0% | |
| CTTGTCGAGATCAGAAGCTT+TGG | + | chr4.2:184103-184122 | None:intergenic | 45.0% | |
| GAATCCTGTTTCCACCAATC+TGG | - | chr4.2:185863-185882 | MS.gene93748:intron | 45.0% | |
| GACATCAGCGCACAAAAACT+TGG | + | chr4.2:185110-185129 | None:intergenic | 45.0% | |
| GATAAGCAGCGGTGAATCTT+TGG | + | chr4.2:187550-187569 | None:intergenic | 45.0% | |
| GATAGCACGTTCAATAGCAC+GGG | + | chr4.2:187900-187919 | None:intergenic | 45.0% | |
| GCTGAATACATCAAGGAAGG+AGG | - | chr4.2:188581-188600 | MS.gene93748:intron | 45.0% | |
| GTCTTCTCCTTTGTTCATGC+AGG | - | chr4.2:186389-186408 | MS.gene93748:CDS | 45.0% | |
| GTTTGTGAAAACACTGCAGC+AGG | - | chr4.2:188888-188907 | MS.gene93748:intron | 45.0% | |
| TACAAGTGGTTGAAACCTGG+AGG | - | chr4.2:188503-188522 | MS.gene93748:intron | 45.0% | |
| TACATACACCTGGGGCTAAA+AGG | + | chr4.2:188084-188103 | None:intergenic | 45.0% | |
| TCCCTGCTACCAGAATATGA+AGG | - | chr4.2:184820-184839 | MS.gene93748:intron | 45.0% | |
| TCTAAATCTGCTGCAGATGC+TGG | - | chr4.2:188727-188746 | MS.gene93748:intron | 45.0% | |
| TCTGTTATTGAGCTTGGAGC+CGG | - | chr4.2:184847-184866 | MS.gene93748:intron | 45.0% | |
| TCTTTGAATCCCCAGATTGG+TGG | + | chr4.2:185877-185896 | None:intergenic | 45.0% | |
| TGATGTCACCTCTCCAAAGA+TGG | - | chr4.2:185123-185142 | MS.gene93748:CDS | 45.0% | |
| TGTTGAGGATCGAACTGATC+AGG | - | chr4.2:188772-188791 | MS.gene93748:intron | 45.0% | |
| TTACGATATGAGCGCGTGTA+TGG | - | chr4.2:186712-186731 | MS.gene93748:intron | 45.0% | |
| TTCTTGGGCAGAAACGACAA+AGG | - | chr4.2:187736-187755 | MS.gene93748:intron | 45.0% | |
| ! | AAAGCCTGGTCAGAAAGTAC+TGG | - | chr4.2:187781-187800 | MS.gene93748:intron | 45.0% |
| ! | ATTCTCAACCTGAAGCACCA+AGG | + | chr4.2:185789-185808 | None:intergenic | 45.0% |
| ! | CAGCATTGGGAAATACTACG+CGG | + | chr4.2:185547-185566 | None:intergenic | 45.0% |
| ! | CGTGCTATTGAACGTGCTAT+CGG | - | chr4.2:187899-187918 | MS.gene93748:CDS | 45.0% |
| ! | CTTGTGGGCTGTAAATGCAT+TGG | - | chr4.2:186465-186484 | MS.gene93748:intron | 45.0% |
| ! | GCCGGTATTGGAAGATTTAC+CGG | - | chr4.2:184865-184884 | MS.gene93748:intron | 45.0% |
| ! | GTGTATAGTGTGGCGGAATT+TGG | + | chr4.2:185689-185708 | None:intergenic | 45.0% |
| ! | TTCTCAACCTGAAGCACCAA+GGG | + | chr4.2:185788-185807 | None:intergenic | 45.0% |
| !! | AAAGGTGGGCTATAGGTCAT+GGG | - | chr4.2:186133-186152 | MS.gene93748:intron | 45.0% |
| !! | ACAAGTAAGAGCATCACGTC+AGG | - | chr4.2:184609-184628 | MS.gene93748:intron | 45.0% |
| !! | AGCTTTATCCTTTTAGCCCC+AGG | - | chr4.2:188073-188092 | MS.gene93748:intron | 45.0% |
| !! | CAAGGCTTTATTAGCACTGG+AGG | - | chr4.2:186736-186755 | MS.gene93748:intron | 45.0% |
| !! | GGTCAGAAAGTACTGGATGT+TGG | - | chr4.2:187788-187807 | MS.gene93748:intron | 45.0% |
| !! | TAAAGGTGGGCTATAGGTCA+TGG | - | chr4.2:186132-186151 | MS.gene93748:intron | 45.0% |
| !! | TGATGGTAAAGGTGGGCTAT+AGG | - | chr4.2:186126-186145 | MS.gene93748:intron | 45.0% |
| !! | TGGTGCAGATTTGCTGGATA+TGG | - | chr4.2:186614-186633 | MS.gene93748:CDS | 45.0% |
| !!! | TGTTTTTCCCTTGGTGCTTC+AGG | - | chr4.2:185778-185797 | MS.gene93748:intron | 45.0% |
| !!! | TTTTTTTTTTATATATACAT+AGG | - | chr4.2:184792-184811 | MS.gene93748:intron | 5.0% |
| AATTGCTCTCGAGAGCCAGA+AGG | - | chr4.2:188915-188934 | MS.gene93748:intron | 50.0% | |
| AGCTTTCAGCGCCAATTCTC+CGG | + | chr4.2:184887-184906 | None:intergenic | 50.0% | |
| ATCCACGGGTGAACTGAAGA+GGG | + | chr4.2:184277-184296 | None:intergenic | 50.0% | |
| ATCCCCAGATTGGTGGAAAC+AGG | + | chr4.2:185870-185889 | None:intergenic | 50.0% | |
| ATGGAAGGCGAAGCAGATCA+GGG | - | chr4.2:189082-189101 | MS.gene93748:intron | 50.0% | |
| ATTGAGCTTGGAGCCGGTAT+TGG | - | chr4.2:184853-184872 | MS.gene93748:intron | 50.0% | |
| CACTGATGAAGTCGTCCTTC+TGG | + | chr4.2:188933-188952 | None:intergenic | 50.0% | |
| CGACAAGGAAGAAAGACCTG+AGG | - | chr4.2:184116-184135 | MS.gene93748:CDS | 50.0% | |
| GCCCACAAGAGAAAGCTCAA+AGG | + | chr4.2:186454-186473 | None:intergenic | 50.0% | |
| GCTAAGCTGGAACTAAAGCC+TGG | - | chr4.2:187767-187786 | MS.gene93748:intron | 50.0% | |
| GCTGAAAGCTGGTCAATTGC+TGG | - | chr4.2:184897-184916 | MS.gene93748:intron | 50.0% | |
| TGGCGGAGGTGATTTCTACA+TGG | - | chr4.2:187820-187839 | MS.gene93748:intron | 50.0% | |
| ! | CTGGATGTTGGTTGTGGTGT+TGG | - | chr4.2:187800-187819 | MS.gene93748:intron | 50.0% |
| ! | GATGTTGGTTGTGGTGTTGG+CGG | - | chr4.2:187803-187822 | MS.gene93748:intron | 50.0% |
| ! | GCTGCGACTGCTGTGTTTTT+AGG | + | chr4.2:186901-186920 | None:intergenic | 50.0% |
| ! | TTGTGCTGATCTCTCTGTCG+AGG | - | chr4.2:184062-184081 | MS.gene93748:intron | 50.0% |
| !! | GGCCAAGGCTTTATTAGCAC+TGG | - | chr4.2:186733-186752 | MS.gene93748:intron | 50.0% |
| AAGATGAGGAGACGGACCTC+AGG | + | chr4.2:184135-184154 | None:intergenic | 55.0% | |
| AAGCAGATCAGGGGTGAACG+AGG | - | chr4.2:189092-189111 | MS.gene93748:intron | 55.0% | |
| AGCAGATCAGGGGTGAACGA+GGG | - | chr4.2:189093-189112 | MS.gene93748:intron | 55.0% | |
| CATCCACGGGTGAACTGAAG+AGG | + | chr4.2:184278-184297 | None:intergenic | 55.0% | |
| CTGCAGATGCTGGAGAATGC+TGG | - | chr4.2:188737-188756 | MS.gene93748:intron | 55.0% | |
| CTGGGTTCCCTGTAGTGAGT+AGG | + | chr4.2:185911-185930 | None:intergenic | 55.0% | |
| GATGGAAGGCGAAGCAGATC+AGG | - | chr4.2:189081-189100 | MS.gene93748:intron | 55.0% | |
| TATGAGCGCGTGTATGGCCA+AGG | - | chr4.2:186718-186737 | MS.gene93748:intron | 55.0% | |
| TGAACGAGGGGAGCAGAAGT+GGG | - | chr4.2:189106-189125 | MS.gene93748:intron | 55.0% | |
| TGGAAGGCGAAGCAGATCAG+GGG | - | chr4.2:189083-189102 | MS.gene93748:intron | 55.0% | |
| ! | AGCTGGTCAATTGCTGGCTG+TGG | - | chr4.2:184903-184922 | MS.gene93748:intron | 55.0% |
| ! | GGAGAATTGGCGCTGAAAGC+TGG | - | chr4.2:184886-184905 | MS.gene93748:intron | 55.0% |
| ! | TCAGCGAGAAGCGTGTGATC+AGG | - | chr4.2:187323-187342 | MS.gene93748:intron | 55.0% |
| CTCCCTCTTCAGTTCACCCG+TGG | - | chr4.2:184272-184291 | MS.gene93748:intron | 60.0% | |
| GAACGAGGGGAGCAGAAGTG+GGG | - | chr4.2:189107-189126 | MS.gene93748:intron | 60.0% | |
| GCAGATCAGGGGTGAACGAG+GGG | - | chr4.2:189094-189113 | MS.gene93748:intron | 60.0% | |
| GTGAACGAGGGGAGCAGAAG+TGG | - | chr4.2:189105-189124 | MS.gene93748:intron | 60.0% | |
| !! | GTTGGTTGTGGTGTTGGCGG+AGG | - | chr4.2:187806-187825 | MS.gene93748:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 183912 | 189154 | 183912 | ID=MS.gene93748 |
| chr4.2 | mRNA | 183912 | 189154 | 183912 | ID=MS.gene93748.t1;Parent=MS.gene93748 |
| chr4.2 | exon | 189142 | 189154 | 189142 | ID=MS.gene93748.t1.exon1;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 189142 | 189154 | 189142 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 188929 | 189056 | 188929 | ID=MS.gene93748.t1.exon2;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 188929 | 189056 | 188929 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 188115 | 188252 | 188115 | ID=MS.gene93748.t1.exon3;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 188115 | 188252 | 188115 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 187853 | 187990 | 187853 | ID=MS.gene93748.t1.exon4;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 187853 | 187990 | 187853 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 187123 | 187266 | 187123 | ID=MS.gene93748.t1.exon5;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 187123 | 187266 | 187123 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 186545 | 186655 | 186545 | ID=MS.gene93748.t1.exon6;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 186545 | 186655 | 186545 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 186303 | 186444 | 186303 | ID=MS.gene93748.t1.exon7;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 186303 | 186444 | 186303 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 185039 | 185319 | 185039 | ID=MS.gene93748.t1.exon8;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 185039 | 185319 | 185039 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 184429 | 184590 | 184429 | ID=MS.gene93748.t1.exon9;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 184429 | 184590 | 184429 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 184273 | 184323 | 184273 | ID=MS.gene93748.t1.exon10;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 184273 | 184323 | 184273 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 184103 | 184177 | 184103 | ID=MS.gene93748.t1.exon11;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 184103 | 184177 | 184103 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| chr4.2 | exon | 183912 | 184010 | 183912 | ID=MS.gene93748.t1.exon12;Parent=MS.gene93748.t1 |
| chr4.2 | CDS | 183912 | 184010 | 183912 | ID=cds.MS.gene93748.t1;Parent=MS.gene93748.t1 |
| Gene Sequence |
| Protein sequence |
