Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047043.t1 | XP_003631124.2 | 98.4 | 446 | 7 | 0 | 1 | 446 | 49 | 494 | 5.90E-259 | 902.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047043.t1 | Q9M571 | 73.4 | 447 | 118 | 1 | 1 | 446 | 48 | 494 | 1.8e-203 | 709.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047043.t1 | G7LE68 | 98.4 | 446 | 7 | 0 | 1 | 446 | 49 | 494 | 4.3e-259 | 902.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047043 | MS.gene047006 | PPI |
| MS.gene93748 | MS.gene047043 | PPI |
| MS.gene047043 | MS.gene040109 | PPI |
| MS.gene047043 | MS.gene066974 | PPI |
| MS.gene047043 | MS.gene93748 | PPI |
| MS.gene047043 | MS.gene82097 | PPI |
| MS.gene047043 | MS.gene042859 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047043.t1 | MTR_8g107370 | 98.430 | 446 | 7 | 0 | 1 | 446 | 43 | 488 | 0.0 | 910 |
| MS.gene047043.t1 | MTR_8g107370 | 98.430 | 446 | 7 | 0 | 1 | 446 | 49 | 494 | 0.0 | 910 |
| MS.gene047043.t1 | MTR_8g107370 | 98.551 | 414 | 6 | 0 | 1 | 414 | 49 | 462 | 0.0 | 847 |
| MS.gene047043.t1 | MTR_8g107370 | 96.259 | 401 | 15 | 0 | 1 | 401 | 49 | 449 | 0.0 | 775 |
| MS.gene047043.t1 | MTR_6g069600 | 81.166 | 446 | 83 | 1 | 1 | 445 | 51 | 496 | 0.0 | 759 |
| MS.gene047043.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 230 | 384 | 43 | 206 | 5.48e-14 | 72.8 |
| MS.gene047043.t1 | MTR_3g032530 | 31.707 | 164 | 103 | 4 | 230 | 384 | 86 | 249 | 9.26e-14 | 72.4 |
| MS.gene047043.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 240 | 352 | 75 | 189 | 1.66e-11 | 65.5 |
| MS.gene047043.t1 | MTR_1g014690 | 29.565 | 115 | 79 | 1 | 240 | 352 | 130 | 244 | 1.96e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047043.t1 | AT1G73600 | 71.076 | 446 | 128 | 1 | 1 | 445 | 58 | 503 | 0.0 | 689 |
| MS.gene047043.t1 | AT1G73600 | 71.076 | 446 | 128 | 1 | 1 | 445 | 44 | 489 | 0.0 | 688 |
| MS.gene047043.t1 | AT1G48600 | 71.973 | 446 | 124 | 1 | 1 | 445 | 29 | 474 | 0.0 | 687 |
| MS.gene047043.t1 | AT3G18000 | 70.852 | 446 | 129 | 1 | 1 | 445 | 45 | 490 | 0.0 | 686 |
| MS.gene047043.t1 | AT1G48600 | 71.973 | 446 | 124 | 1 | 1 | 445 | 45 | 490 | 0.0 | 686 |
| MS.gene047043.t1 | AT5G13710 | 33.537 | 164 | 100 | 4 | 230 | 384 | 86 | 249 | 1.03e-14 | 75.5 |
| MS.gene047043.t1 | AT5G13710 | 33.537 | 164 | 100 | 4 | 230 | 384 | 86 | 249 | 1.03e-14 | 75.5 |
| MS.gene047043.t1 | AT1G64970 | 28.846 | 104 | 72 | 1 | 242 | 343 | 130 | 233 | 1.30e-11 | 66.2 |
Find 101 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCACGGGAAATCACATTTA+TGG | 0.261865 | 4.1:+214415 | None:intergenic |
| CAACTCTATCTAAGAACTTC+TGG | 0.266070 | 4.1:+215597 | None:intergenic |
| ACAAACCTTTGTGTAAAATC+TGG | 0.284632 | 4.1:+216339 | None:intergenic |
| TCCTTTGAGCTTTCTCTTGT+GGG | 0.295325 | 4.1:-215816 | MS.gene047043:CDS |
| GTGAACGAGGGGAGCAGAAG+TGG | 0.305672 | 4.1:-213192 | MS.gene047043:CDS |
| GATGGAAGGCGAAGCAGATC+AGG | 0.322790 | 4.1:-213216 | MS.gene047043:CDS |
| CCTTCAGAAACATCCATCTT+TGG | 0.322834 | 4.1:+217130 | None:intergenic |
| GAATCCTGTTTCCACCAATC+TGG | 0.329775 | 4.1:-216403 | MS.gene047043:CDS |
| CACTGATGAAGTCGTCCTTC+TGG | 0.335719 | 4.1:+213367 | None:intergenic |
| TGGTGCAGATTTGCTGGATA+TGG | 0.363415 | 4.1:-215652 | MS.gene047043:intron |
| AGGTTAGATCACATGATGAT+AGG | 0.371337 | 4.1:-215625 | MS.gene047043:CDS |
| TGGAAGATTTACCGGAGAAT+TGG | 0.371460 | 4.1:-217393 | MS.gene047043:CDS |
| GCCGGTATTGGAAGATTTAC+CGG | 0.377974 | 4.1:-217401 | MS.gene047043:CDS |
| TTCCTTCATATTCTGGTAGC+AGG | 0.383460 | 4.1:+217444 | None:intergenic |
| GCTGAAAGCTGGTCAATTGC+TGG | 0.390425 | 4.1:-217369 | MS.gene047043:CDS |
| ATCCCCAGATTGGTGGAAAC+AGG | 0.392051 | 4.1:+216399 | None:intergenic |
| CTGTAGAACGAAAGCATTAA+CGG | 0.397285 | 4.1:-217196 | MS.gene047043:intron |
| TTCCTTTGAGCTTTCTCTTG+TGG | 0.410639 | 4.1:-215817 | MS.gene047043:CDS |
| TGTTGAGGATCGAACTGATC+AGG | 0.414212 | 4.1:-213525 | MS.gene047043:intron |
| TTTATTAGCACTGGAGGACT+TGG | 0.419528 | 4.1:-215524 | MS.gene047043:intron |
| ATTGAGCTTGGAGCCGGTAT+TGG | 0.420522 | 4.1:-217413 | MS.gene047043:CDS |
| GGAAAATCAGTTATTGAGCT+TGG | 0.426730 | 4.1:-217425 | MS.gene047043:CDS |
| TTACGATATGAGCGCGTGTA+TGG | 0.432033 | 4.1:-215554 | MS.gene047043:CDS |
| GCTTGTATTCTTTCATGTCA+TGG | 0.435700 | 4.1:+213684 | None:intergenic |
| CTGGATGTTGGTTGTGGTGT+TGG | 0.442233 | 4.1:-214497 | MS.gene047043:CDS |
| GGTTAGATCACATGATGATA+GGG | 0.442687 | 4.1:-215624 | MS.gene047043:CDS |
| GTTGGTTGTGGTGTTGGCGG+AGG | 0.443753 | 4.1:-214491 | MS.gene047043:CDS |
| TTCTCTTTGAATCCCCAGAT+TGG | 0.446538 | 4.1:+216389 | None:intergenic |
| TGCCATATGAGTGATATCTC+TGG | 0.446888 | 4.1:-215843 | MS.gene047043:CDS |
| GGCCAAGGCTTTATTAGCAC+TGG | 0.447921 | 4.1:-215533 | MS.gene047043:CDS |
| CTGCAGATGCTGGAGAATGC+TGG | 0.456311 | 4.1:-213560 | MS.gene047043:intron |
| AATCCTGTTTCCACCAATCT+GGG | 0.456764 | 4.1:-216402 | MS.gene047043:CDS |
| TCCCAGAGATATCACTCATA+TGG | 0.459147 | 4.1:+215841 | None:intergenic |
| CAAACCTTTGTGTAAAATCT+GGG | 0.462103 | 4.1:+216340 | None:intergenic |
| AGCTTTCAGCGCCAATTCTC+CGG | 0.462761 | 4.1:+217382 | None:intergenic |
| GGAGAATTGGCGCTGAAAGC+TGG | 0.475774 | 4.1:-217380 | MS.gene047043:CDS |
| ATTGGTGGAAACAGGATTCT+CGG | 0.477277 | 4.1:+216407 | None:intergenic |
| TGAACGAGGGGAGCAGAAGT+GGG | 0.479207 | 4.1:-213191 | MS.gene047043:CDS |
| AGCTGGTCAATTGCTGGCTG+TGG | 0.479823 | 4.1:-217363 | MS.gene047043:CDS |
| ACGAGTGTAGATTACATCAT+AGG | 0.479962 | 4.1:+214313 | None:intergenic |
| CGTGCTATTGAACGTGCTAT+CGG | 0.481806 | 4.1:-214398 | MS.gene047043:CDS |
| GTAATTAGAAGTTGACCTCC+AGG | 0.482434 | 4.1:+213779 | None:intergenic |
| ATTACAATCCTACTCACTAC+AGG | 0.482810 | 4.1:-216366 | MS.gene047043:CDS |
| GTTTGTGAAAACACTGCAGC+AGG | 0.484254 | 4.1:-213409 | MS.gene047043:CDS |
| TAAAATGATCTAAATAATGT+TGG | 0.485432 | 4.1:+213815 | None:intergenic |
| AAAGCCTGGTCAGAAAGTAC+TGG | 0.495881 | 4.1:-214516 | MS.gene047043:CDS |
| AAAGGAACTTGTAGCTAAGC+TGG | 0.495920 | 4.1:-214543 | MS.gene047043:CDS |
| CTCCAGTGCTAATAAAGCCT+TGG | 0.496405 | 4.1:+215531 | None:intergenic |
| TCCGGTAAATCTTCCAATAC+CGG | 0.497820 | 4.1:+217400 | None:intergenic |
| TCTTTGAATCCCCAGATTGG+TGG | 0.498788 | 4.1:+216392 | None:intergenic |
| ATTACATCATAGGTCTTCTC+AGG | 0.499504 | 4.1:+214323 | None:intergenic |
| TATTCAGCAAATTCTGAAGA+TGG | 0.499970 | 4.1:+213731 | None:intergenic |
| CCTTACTTTGATGTATAGCA+TGG | 0.513489 | 4.1:+214286 | None:intergenic |
| GATGTTGGTTGTGGTGTTGG+CGG | 0.516899 | 4.1:-214494 | MS.gene047043:CDS |
| TCAGTTATTGAGCTTGGAGC+CGG | 0.519308 | 4.1:-217419 | MS.gene047043:CDS |
| ACTGATTACTGCAAAAGTGC+TGG | 0.520458 | 4.1:-213758 | MS.gene047043:CDS |
| ACAATGAAATTGTGGAGAGA+TGG | 0.523489 | 4.1:-213234 | MS.gene047043:CDS |
| AGAATTTGCTGAATACATCA+AGG | 0.524867 | 4.1:-213723 | MS.gene047043:CDS |
| GATTTGCTGGATATGGCAAA+AGG | 0.528860 | 4.1:-215645 | MS.gene047043:CDS |
| GATGTATCTTTCAGATAATG+AGG | 0.530422 | 4.1:-217074 | MS.gene047043:intron |
| CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 4.1:-217336 | MS.gene047043:intron |
| TCCTTCATATTCTGGTAGCA+GGG | 0.535206 | 4.1:+217445 | None:intergenic |
| GCCATATGAGTGATATCTCT+GGG | 0.536166 | 4.1:-215842 | MS.gene047043:CDS |
| TGATGTCACCTCTCCAAAGA+TGG | 0.540164 | 4.1:-217143 | MS.gene047043:CDS |
| AAGCAGATCAGGGGTGAACG+AGG | 0.552850 | 4.1:-213205 | MS.gene047043:CDS |
| ATGGAAGGCGAAGCAGATCA+GGG | 0.557359 | 4.1:-213215 | MS.gene047043:CDS |
| TATGAGCGCGTGTATGGCCA+AGG | 0.560692 | 4.1:-215548 | MS.gene047043:CDS |
| GCTAAGCTGGAACTAAAGCC+TGG | 0.561514 | 4.1:-214530 | MS.gene047043:CDS |
| CTTGTGGGATGTAAATGCAT+TGG | 0.564815 | 4.1:-215801 | MS.gene047043:CDS |
| TGGCGGAGGTGATTTCTACA+TGG | 0.570395 | 4.1:-214477 | MS.gene047043:CDS |
| CCAAAGATGGATGTTTCTGA+AGG | 0.571313 | 4.1:-217130 | MS.gene047043:CDS |
| ATGAAATGGTTGAAAGATGG+TGG | 0.574449 | 4.1:-216442 | MS.gene047043:CDS |
| CTGGGTTCCCTGTAGTGAGT+AGG | 0.586374 | 4.1:+216358 | None:intergenic |
| TGGATTTGATGTCATTGTTG+AGG | 0.596748 | 4.1:-213540 | MS.gene047043:CDS |
| GATAGCACGTTCAATAGCAC+GGG | 0.597140 | 4.1:+214400 | None:intergenic |
| ATGATGAAATGGTTGAAAGA+TGG | 0.599340 | 4.1:-216445 | MS.gene047043:CDS |
| ACATCCAGTACTTTCTGACC+AGG | 0.599476 | 4.1:+214512 | None:intergenic |
| GAACGAGGGGAGCAGAAGTG+GGG | 0.600599 | 4.1:-213190 | MS.gene047043:CDS |
| GGATGACTACAATGAAATTG+TGG | 0.600685 | 4.1:-213242 | MS.gene047043:CDS |
| CGATAGCACGTTCAATAGCA+CGG | 0.601134 | 4.1:+214399 | None:intergenic |
| AGAAACATCCATCTTTGGAG+AGG | 0.608120 | 4.1:+217135 | None:intergenic |
| GCAGATCAGGGGTGAACGAG+GGG | 0.609433 | 4.1:-213203 | MS.gene047043:CDS |
| TTTGCTGAATACATCAAGGA+AGG | 0.610174 | 4.1:-213719 | MS.gene047043:CDS |
| AGCAGATCAGGGGTGAACGA+GGG | 0.610403 | 4.1:-213204 | MS.gene047043:CDS |
| CAAGGCTTTATTAGCACTGG+AGG | 0.615635 | 4.1:-215530 | MS.gene047043:CDS |
| AAATAAGAAGAATCAAAACC+AGG | 0.627133 | 4.1:-215766 | MS.gene047043:intron |
| GGTCAGAAAGTACTGGATGT+TGG | 0.630821 | 4.1:-214509 | MS.gene047043:CDS |
| ATCCTGTTTCCACCAATCTG+GGG | 0.633940 | 4.1:-216401 | MS.gene047043:CDS |
| TGAAATTGTGGAGAGATGGA+AGG | 0.635643 | 4.1:-213230 | MS.gene047043:CDS |
| GTTAGATCACATGATGATAG+GGG | 0.637701 | 4.1:-215623 | MS.gene047043:CDS |
| TGACATGAAAGAATACAAGC+AGG | 0.639443 | 4.1:-213681 | MS.gene047043:intron |
| TACAAGTGGTTGAAACCTGG+AGG | 0.640796 | 4.1:-213794 | MS.gene047043:CDS |
| AATTGCTCTCGAGAGCCAGA+AGG | 0.643480 | 4.1:-213382 | MS.gene047043:CDS |
| TCCCACAAGAGAAAGCTCAA+AGG | 0.646932 | 4.1:+215815 | None:intergenic |
| AAAGTACTGGATGTTGGTTG+TGG | 0.647499 | 4.1:-214503 | MS.gene047043:CDS |
| TCCCTGCTACCAGAATATGA+AGG | 0.647755 | 4.1:-217446 | MS.gene047043:CDS |
| GCTGAATACATCAAGGAAGG+AGG | 0.652193 | 4.1:-213716 | MS.gene047043:CDS |
| TTCTTGGGCAGAAACGACAA+AGG | 0.658742 | 4.1:-214561 | MS.gene047043:intron |
| TTACAATCCTACTCACTACA+GGG | 0.660434 | 4.1:-216365 | MS.gene047043:CDS |
| GGGAAATCACATTTATGGAG+AGG | 0.665644 | 4.1:+214420 | None:intergenic |
| TGGAAGGCGAAGCAGATCAG+GGG | 0.665972 | 4.1:-213214 | MS.gene047043:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTAAAACATATTGAT+TGG | - | chr4.1:215644-215663 | MS.gene047043:CDS | 10.0% |
| !!! | ATTATCATTACATTTTATTT+TGG | - | chr4.1:215383-215402 | MS.gene047043:intron | 10.0% |
| !!! | TTTTTTTTTTCTTTTCAATT+CGG | - | chr4.1:213612-213631 | MS.gene047043:intron | 10.0% |
| !! | GTAAATAAAAAAATCAACTT+TGG | - | chr4.1:213715-213734 | MS.gene047043:CDS | 15.0% |
| !! | TAAAATGATCTAAATAATGT+TGG | + | chr4.1:216805-216824 | None:intergenic | 15.0% |
| !! | TTTGTTTAATCTCAATTATT+GGG | - | chr4.1:213867-213886 | MS.gene047043:intron | 15.0% |
| !!! | AATCAAAGCTTTTAAATTAA+GGG | + | chr4.1:217348-217367 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATACTTTATTTT+AGG | - | chr4.1:217313-217332 | MS.gene047043:intron | 15.0% |
| !!! | TTTTGTTTAATCTCAATTAT+TGG | - | chr4.1:213866-213885 | MS.gene047043:intron | 15.0% |
| !!! | TTTTTAATCAAACAATAATC+TGG | + | chr4.1:214336-214355 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAACCAAGTA+TGG | + | chr4.1:215979-215998 | None:intergenic | 20.0% |
| !! | AATAACATTTACGAGTAATA+AGG | + | chr4.1:216546-216565 | None:intergenic | 20.0% |
| !! | AATGAAAAGGTAGAAAATAT+TGG | + | chr4.1:215332-215351 | None:intergenic | 20.0% |
| !! | AATTATTATGTAATTGTACC+TGG | - | chr4.1:215506-215525 | MS.gene047043:intron | 20.0% |
| !! | ACTAGAATAATTATTTGCAA+TGG | + | chr4.1:213835-213854 | None:intergenic | 20.0% |
| !! | TTAACATGTTCTTAAATTCA+CGG | + | chr4.1:213779-213798 | None:intergenic | 20.0% |
| !! | TTGTTTAATCTCAATTATTG+GGG | - | chr4.1:213868-213887 | MS.gene047043:intron | 20.0% |
| !!! | AGCTGTTTTATTTAATCAAA+AGG | + | chr4.1:214419-214438 | None:intergenic | 20.0% |
| !!! | ATTTTGATCAATCATTTTGT+TGG | - | chr4.1:216645-216664 | MS.gene047043:intron | 20.0% |
| !!! | CAATCAAAGCTTTTAAATTA+AGG | + | chr4.1:217349-217368 | None:intergenic | 20.0% |
| !!! | TATTTAGATCATTTTACAAG+TGG | - | chr4.1:216809-216828 | MS.gene047043:intron | 20.0% |
| !!! | TCATATAATTTTTTAGAGCA+TGG | - | chr4.1:215823-215842 | MS.gene047043:CDS | 20.0% |
| !!! | TCATTGGATTATATTTTGTA+AGG | - | chr4.1:214643-214662 | MS.gene047043:intron | 20.0% |
| !!! | TGTGTACAATAATATTTTCA+TGG | - | chr4.1:214945-214964 | MS.gene047043:intron | 20.0% |
| ! | AAAAAGATTGACATCAACTT+TGG | - | chr4.1:214353-214372 | MS.gene047043:CDS | 25.0% |
| ! | AAAAGATTGACATCAACTTT+GGG | - | chr4.1:214354-214373 | MS.gene047043:CDS | 25.0% |
| ! | AAATAAGAAGAATCAAAACC+AGG | - | chr4.1:214851-214870 | MS.gene047043:intron | 25.0% |
| ! | AACAATAACAATTCTCAGAA+TGG | + | chr4.1:213323-213342 | None:intergenic | 25.0% |
| ! | ACATGTTTGAACCTAATTAA+CGG | - | chr4.1:214444-214463 | MS.gene047043:CDS | 25.0% |
| ! | AGTGTATGATTTCTATCTTA+TGG | - | chr4.1:214385-214404 | MS.gene047043:CDS | 25.0% |
| ! | CAAATTATAAGTGTATAGTG+TGG | + | chr4.1:214050-214069 | None:intergenic | 25.0% |
| ! | CACAAACAAATATATCCATT+TGG | - | chr4.1:215856-215875 | MS.gene047043:CDS | 25.0% |
| ! | CACACTATACACTTATAATT+TGG | - | chr4.1:214048-214067 | MS.gene047043:intron | 25.0% |
| ! | CATTACACGATAATTATAAG+AGG | + | chr4.1:215466-215485 | None:intergenic | 25.0% |
| ! | TAAAAGAATACCTAAACTCT+AGG | - | chr4.1:216492-216511 | MS.gene047043:intron | 25.0% |
| ! | TAAGAGGAAGAATAATCAAA+TGG | + | chr4.1:215450-215469 | None:intergenic | 25.0% |
| ! | TACAAAGTACAGACATAAAA+AGG | + | chr4.1:216682-216701 | None:intergenic | 25.0% |
| ! | TAGCAAAAAGAATGATGAAA+TGG | - | chr4.1:214161-214180 | MS.gene047043:intron | 25.0% |
| ! | TTAACAAAACATGACTTAGT+TGG | - | chr4.1:214087-214106 | MS.gene047043:intron | 25.0% |
| ! | TTGCAAGCAAATTAAACTAT+TGG | - | chr4.1:216584-216603 | MS.gene047043:intron | 25.0% |
| ! | TTGTACTAAATAGCATATTG+CGG | - | chr4.1:213998-214017 | MS.gene047043:intron | 25.0% |
| !! | AATAACTTCATTGTTACTTG+TGG | - | chr4.1:217179-217198 | MS.gene047043:CDS | 25.0% |
| !! | TCGTAAATGTTATTCCTTTT+CGG | - | chr4.1:216552-216571 | MS.gene047043:intron | 25.0% |
| !! | TCTAACATGTTAATTTGAAG+CGG | + | chr4.1:215142-215161 | None:intergenic | 25.0% |
| !! | TTGATGTGATTTTCTCAAAT+TGG | - | chr4.1:213515-213534 | MS.gene047043:intron | 25.0% |
| !! | TTTTCTACCTTTTCATTCTT+TGG | - | chr4.1:215335-215354 | MS.gene047043:intron | 25.0% |
| !!! | CTTTTCAATTTTCAAGCTAT+TGG | - | chr4.1:215603-215622 | MS.gene047043:CDS | 25.0% |
| !!! | TAAAAGCTTTGATTGTTTTC+AGG | - | chr4.1:217354-217373 | MS.gene047043:CDS | 25.0% |
| AAAAGAACTTAACCTTGATC+AGG | + | chr4.1:216021-216040 | None:intergenic | 30.0% | |
| AAAGAGAGTAAGACAACAAA+CGG | + | chr4.1:216963-216982 | None:intergenic | 30.0% | |
| AACATTTACGAGTAATAAGG+TGG | + | chr4.1:216543-216562 | None:intergenic | 30.0% | |
| ACAAACCTTTGTGTAAAATC+TGG | + | chr4.1:214281-214300 | None:intergenic | 30.0% | |
| ACATGTATACATCAGTCAAT+TGG | + | chr4.1:214928-214947 | None:intergenic | 30.0% | |
| ATCAAAGTTACCAAACCAAA+AGG | + | chr4.1:214678-214697 | None:intergenic | 30.0% | |
| ATGATGAAATGGTTGAAAGA+TGG | - | chr4.1:214172-214191 | MS.gene047043:intron | 30.0% | |
| ATGTATGATTGTATGAACTG+TGG | - | chr4.1:213654-213673 | MS.gene047043:intron | 30.0% | |
| ATTATAAGTGTATAGTGTGG+CGG | + | chr4.1:214047-214066 | None:intergenic | 30.0% | |
| ATTTCAAGATACGATCCAAA+TGG | + | chr4.1:215874-215893 | None:intergenic | 30.0% | |
| CAAACCTTTGTGTAAAATCT+GGG | + | chr4.1:214280-214299 | None:intergenic | 30.0% | |
| CATGTTTGAACCTAATTAAC+GGG | - | chr4.1:214445-214464 | MS.gene047043:CDS | 30.0% | |
| CTATATTAAGTGATAAGCAG+CGG | + | chr4.1:215912-215931 | None:intergenic | 30.0% | |
| CTCTCAATTAAGAAGAATTC+TGG | - | chr4.1:216616-216635 | MS.gene047043:intron | 30.0% | |
| GATGTATCTTTCAGATAATG+AGG | - | chr4.1:213543-213562 | MS.gene047043:CDS | 30.0% | |
| TTAAATACCTGCATGAACAA+AGG | + | chr4.1:214750-214769 | None:intergenic | 30.0% | |
| TTAAGTTACTAAGCAAAGCA+TGG | - | chr4.1:213795-213814 | MS.gene047043:CDS | 30.0% | |
| ! | AATTAAACTATTGGTCTCGT+TGG | - | chr4.1:216593-216612 | MS.gene047043:intron | 30.0% |
| ! | GTAAGGCAAATAATACCTTT+TGG | - | chr4.1:214660-214679 | MS.gene047043:intron | 30.0% |
| ! | TATTCAGCAAATTCTGAAGA+TGG | + | chr4.1:216889-216908 | None:intergenic | 30.0% |
| ! | TCTAGTAATTACAAGGTGTT+AGG | - | chr4.1:215214-215233 | MS.gene047043:intron | 30.0% |
| !! | AATTTTGATGTTGAGGTTGT+TGG | - | chr4.1:216168-216187 | MS.gene047043:intron | 30.0% |
| !! | ACTGATTTTCCTTCATATTC+TGG | + | chr4.1:213183-213202 | None:intergenic | 30.0% |
| !! | AGAATTTGCTGAATACATCA+AGG | - | chr4.1:216894-216913 | MS.gene047043:intron | 30.0% |
| !! | CAATCATTTTGTTGGCTAAA+GGG | - | chr4.1:216653-216672 | MS.gene047043:intron | 30.0% |
| !! | GCAAATAATACCTTTTGGTT+TGG | - | chr4.1:214665-214684 | MS.gene047043:intron | 30.0% |
| !! | GTTTGAGTTGCTTAATTCTT+GGG | - | chr4.1:216041-216060 | MS.gene047043:intron | 30.0% |
| !! | TCAATCATTTTGTTGGCTAA+AGG | - | chr4.1:216652-216671 | MS.gene047043:intron | 30.0% |
| !! | TGTTTGAGTTGCTTAATTCT+TGG | - | chr4.1:216040-216059 | MS.gene047043:intron | 30.0% |
| !!! | CTTCTCAGGATATGTTTTTT+TGG | + | chr4.1:216283-216302 | None:intergenic | 30.0% |
| !!! | GGTTGCTTTTCCAAATTTTA+CGG | - | chr4.1:214505-214524 | MS.gene047043:CDS | 30.0% |
| !!! | TTTAATCCTGCTTTTTTACC+TGG | + | chr4.1:214872-214891 | None:intergenic | 30.0% |
| ACAAAACACTCCCGTTAATT+AGG | + | chr4.1:214458-214477 | None:intergenic | 35.0% | |
| ACAATGAAATTGTGGAGAGA+TGG | - | chr4.1:217383-217402 | MS.gene047043:CDS | 35.0% | |
| ACGAGTGTAGATTACATCAT+AGG | + | chr4.1:216307-216326 | None:intergenic | 35.0% | |
| AGAATCTATCATCCTGATCA+AGG | - | chr4.1:216006-216025 | MS.gene047043:intron | 35.0% | |
| AGGTTAGATCACATGATGAT+AGG | - | chr4.1:214992-215011 | MS.gene047043:intron | 35.0% | |
| AGTGTCAGCTGAAATCAAAT+GGG | + | chr4.1:216988-217007 | None:intergenic | 35.0% | |
| AGTTAATGTTGAGCACTCAT+TGG | - | chr4.1:214627-214646 | MS.gene047043:intron | 35.0% | |
| ATACTTCAATACTAGCAACC+AGG | + | chr4.1:215527-215546 | None:intergenic | 35.0% | |
| ATCAGTGATTTCAGCAATGT+GGG | - | chr4.1:217266-217285 | MS.gene047043:intron | 35.0% | |
| ATGAAATGGTTGAAAGATGG+TGG | - | chr4.1:214175-214194 | MS.gene047043:intron | 35.0% | |
| ATGATATGTTGCTCTTAGAC+TGG | - | chr4.1:215940-215959 | MS.gene047043:intron | 35.0% | |
| ATTACAATCCTACTCACTAC+AGG | - | chr4.1:214251-214270 | MS.gene047043:intron | 35.0% | |
| ATTACATCATAGGTCTTCTC+AGG | + | chr4.1:216297-216316 | None:intergenic | 35.0% | |
| ATTCCAAGCAATTGTTACAG+AGG | + | chr4.1:216473-216492 | None:intergenic | 35.0% | |
| ATTGAAGTTACCAAACCAAC+AGG | + | chr4.1:214718-214737 | None:intergenic | 35.0% | |
| CAACAATGAGTATCAAAGCT+AGG | + | chr4.1:215741-215760 | None:intergenic | 35.0% | |
| CAACTCTATCTAAGAACTTC+TGG | + | chr4.1:215023-215042 | None:intergenic | 35.0% | |
| CCATGCTATACATCAAAGTA+AGG | - | chr4.1:216331-216350 | MS.gene047043:intron | 35.0% | |
| CCTTACTTTGATGTATAGCA+TGG | + | chr4.1:216334-216353 | None:intergenic | 35.0% | |
| GAGTACATTGCAGAATACAA+AGG | + | chr4.1:216762-216781 | None:intergenic | 35.0% | |
| GCGGAGAAAGGAAAATATAA+AGG | + | chr4.1:215123-215142 | None:intergenic | 35.0% | |
| GCTTGTATTCTTTCATGTCA+TGG | + | chr4.1:216936-216955 | None:intergenic | 35.0% | |
| GGAAAATCAGTTATTGAGCT+TGG | - | chr4.1:213192-213211 | MS.gene047043:CDS | 35.0% | |
| GGATGACTACAATGAAATTG+TGG | - | chr4.1:217375-217394 | MS.gene047043:CDS | 35.0% | |
| GGTTAGATCACATGATGATA+GGG | - | chr4.1:214993-215012 | MS.gene047043:intron | 35.0% | |
| GTAACTGTAAGCATGAATGA+AGG | - | chr4.1:216421-216440 | MS.gene047043:CDS | 35.0% | |
| GTTAGATCACATGATGATAG+GGG | - | chr4.1:214994-215013 | MS.gene047043:intron | 35.0% | |
| TACCTGGTCTAGTAATTACA+AGG | - | chr4.1:215207-215226 | MS.gene047043:intron | 35.0% | |
| TAGTGTCAGCTGAAATCAAA+TGG | + | chr4.1:216989-217008 | None:intergenic | 35.0% | |
| TATCTTCTATCAGTGCTTTG+TGG | - | chr4.1:213750-213769 | MS.gene047043:CDS | 35.0% | |
| TCAAAACCAGGTAAAAAAGC+AGG | - | chr4.1:214863-214882 | MS.gene047043:intron | 35.0% | |
| TCAAAGCTAGGCATTTCAAA+AGG | + | chr4.1:215729-215748 | None:intergenic | 35.0% | |
| TCACTTTCAACCTAGAGTTT+AGG | + | chr4.1:216505-216524 | None:intergenic | 35.0% | |
| TGACATGAAAGAATACAAGC+AGG | - | chr4.1:216936-216955 | MS.gene047043:intron | 35.0% | |
| TGGATTTGATGTCATTGTTG+AGG | - | chr4.1:217077-217096 | MS.gene047043:CDS | 35.0% | |
| TTACAATCCTACTCACTACA+GGG | - | chr4.1:214252-214271 | MS.gene047043:intron | 35.0% | |
| TTACTGTCAATTGGAACCAT+GGG | + | chr4.1:213688-213707 | None:intergenic | 35.0% | |
| TTGAAGTTACCAAACCAACA+GGG | + | chr4.1:214717-214736 | None:intergenic | 35.0% | |
| TTGTAGTTATCTCTATCCCT+TGG | - | chr4.1:214304-214323 | MS.gene047043:CDS | 35.0% | |
| TTGTATTCTGCAATGTACTC+TGG | - | chr4.1:216762-216781 | MS.gene047043:intron | 35.0% | |
| TTTACGAGTAATAAGGTGGA+TGG | + | chr4.1:216539-216558 | None:intergenic | 35.0% | |
| TTTACTGTCAATTGGAACCA+TGG | + | chr4.1:213689-213708 | None:intergenic | 35.0% | |
| TTTCCCAATGCTGTTAAACA+CGG | - | chr4.1:213905-213924 | MS.gene047043:intron | 35.0% | |
| TTTGCTGAATACATCAAGGA+AGG | - | chr4.1:216898-216917 | MS.gene047043:intron | 35.0% | |
| ! | ACAGCTTGTTTACTGTCAAT+TGG | + | chr4.1:213697-213716 | None:intergenic | 35.0% |
| ! | ACTCTAGGTTGAAAGTGATT+TGG | - | chr4.1:216507-216526 | MS.gene047043:intron | 35.0% |
| ! | ATCAGGTTTGTTTGATCCTT+TGG | - | chr4.1:217109-217128 | MS.gene047043:CDS | 35.0% |
| ! | CAAATAATACCCTGTTGGTT+TGG | - | chr4.1:214705-214724 | MS.gene047043:intron | 35.0% |
| ! | CATTGAGAGTGCAATAAAGA+AGG | - | chr4.1:213281-213300 | MS.gene047043:intron | 35.0% |
| ! | GCTTTTCCAAATTTTACGGT+TGG | - | chr4.1:214509-214528 | MS.gene047043:CDS | 35.0% |
| ! | GTTTGGTAACTTTGATCTGT+AGG | - | chr4.1:214682-214701 | MS.gene047043:intron | 35.0% |
| ! | TGTTAATTTGAAGCGGAGAA+AGG | + | chr4.1:215135-215154 | None:intergenic | 35.0% |
| ! | TGTTTTGTGATGGTAAAGGT+GGG | - | chr4.1:214470-214489 | MS.gene047043:CDS | 35.0% |
| ! | TTTTACAAGTGGTTGAAACC+TGG | - | chr4.1:216820-216839 | MS.gene047043:intron | 35.0% |
| !! | CTGTAGAACGAAAGCATTAA+CGG | - | chr4.1:213421-213440 | MS.gene047043:intron | 35.0% |
| !! | CTTTTCATTCTTTGGTGACT+GGG | - | chr4.1:215343-215362 | MS.gene047043:intron | 35.0% |
| !! | GGCTGAAAATTTTGATGTTG+AGG | - | chr4.1:216161-216180 | MS.gene047043:intron | 35.0% |
| !! | TTTTCATTCTTTGGTGACTG+GGG | - | chr4.1:215344-215363 | MS.gene047043:intron | 35.0% |
| !!! | ACTGCTGTGTTTTTAGGTAA+GGG | + | chr4.1:215246-215265 | None:intergenic | 35.0% |
| !!! | CTAACCTTTTGTTTTTCCCT+TGG | - | chr4.1:214120-214139 | MS.gene047043:intron | 35.0% |
| AAAGGAACTTGTAGCTAAGC+TGG | - | chr4.1:216074-216093 | MS.gene047043:intron | 40.0% | |
| AATAATCTGGCAGAGACCAA+GGG | + | chr4.1:214323-214342 | None:intergenic | 40.0% | |
| AATCCTGTTTCCACCAATCT+GGG | - | chr4.1:214215-214234 | MS.gene047043:intron | 40.0% | |
| ACGTGTGCACAAGAAATAGT+TGG | - | chr4.1:215306-215325 | MS.gene047043:intron | 40.0% | |
| ACTATAGCACTGTTGTGTAG+TGG | + | chr4.1:213950-213969 | None:intergenic | 40.0% | |
| AGCACCAAGGGAAAAACAAA+AGG | + | chr4.1:214127-214146 | None:intergenic | 40.0% | |
| AGCACGGGAAATCACATTTA+TGG | + | chr4.1:216205-216224 | None:intergenic | 40.0% | |
| AGCATATTGCGGAACAATAG+TGG | - | chr4.1:214009-214028 | MS.gene047043:intron | 40.0% | |
| ATTGGTGGAAACAGGATTCT+CGG | + | chr4.1:214213-214232 | None:intergenic | 40.0% | |
| CAAGCAATTGTTACAGAGGA+AGG | + | chr4.1:216469-216488 | None:intergenic | 40.0% | |
| CACCTTGTAATTACTAGACC+AGG | + | chr4.1:215212-215231 | None:intergenic | 40.0% | |
| CATCAGTGATTTCAGCAATG+TGG | - | chr4.1:217265-217284 | MS.gene047043:intron | 40.0% | |
| CATTGCAGAATACAAAGGTC+AGG | + | chr4.1:216757-216776 | None:intergenic | 40.0% | |
| CCAGTCACCAAAGAATGAAA+AGG | + | chr4.1:215345-215364 | None:intergenic | 40.0% | |
| CCTTCAGAAACATCCATCTT+TGG | + | chr4.1:213490-213509 | None:intergenic | 40.0% | |
| CTAGACCAGGTAAATGACAA+CGG | + | chr4.1:215199-215218 | None:intergenic | 40.0% | |
| CTTACAGTTACATACACCTG+GGG | + | chr4.1:216412-216431 | None:intergenic | 40.0% | |
| CTTCCTCTGTAACAATTGCT+TGG | - | chr4.1:216467-216486 | MS.gene047043:CDS | 40.0% | |
| CTTGTGGGATGTAAATGCAT+TGG | - | chr4.1:214816-214835 | MS.gene047043:intron | 40.0% | |
| GAGACACCAACCGTAAAATT+TGG | + | chr4.1:214518-214537 | None:intergenic | 40.0% | |
| GCCATATGAGTGATATCTCT+GGG | - | chr4.1:214775-214794 | MS.gene047043:intron | 40.0% | |
| GCTTACAGTTACATACACCT+GGG | + | chr4.1:216413-216432 | None:intergenic | 40.0% | |
| GGGAAATCACATTTATGGAG+AGG | + | chr4.1:216200-216219 | None:intergenic | 40.0% | |
| GTAATTAGAAGTTGACCTCC+AGG | + | chr4.1:216841-216860 | None:intergenic | 40.0% | |
| GTAGGCAAATAATACCCTGT+TGG | - | chr4.1:214700-214719 | MS.gene047043:intron | 40.0% | |
| GTTCTACAGAACGTTATGAG+TGG | + | chr4.1:213410-213429 | None:intergenic | 40.0% | |
| TACCAAGCAAACTAGACCAA+AGG | + | chr4.1:217128-217147 | None:intergenic | 40.0% | |
| TACCCGTGTTTAACAGCATT+GGG | + | chr4.1:213911-213930 | None:intergenic | 40.0% | |
| TCCCAGAGATATCACTCATA+TGG | + | chr4.1:214779-214798 | None:intergenic | 40.0% | |
| TCCGGTAAATCTTCCAATAC+CGG | + | chr4.1:213220-213239 | None:intergenic | 40.0% | |
| TCCTTCATATTCTGGTAGCA+GGG | + | chr4.1:213175-213194 | None:intergenic | 40.0% | |
| TCCTTTGAGCTTTCTCTTGT+GGG | - | chr4.1:214801-214820 | MS.gene047043:intron | 40.0% | |
| TGAAATTGTGGAGAGATGGA+AGG | - | chr4.1:217387-217406 | MS.gene047043:CDS | 40.0% | |
| TGCAAGTGTAAGAACCGAAA+AGG | + | chr4.1:216569-216588 | None:intergenic | 40.0% | |
| TGCATGAACAAAGGAGAAGA+CGG | + | chr4.1:214741-214760 | None:intergenic | 40.0% | |
| TGCATGTATGATGCCATACT+TGG | - | chr4.1:215963-215982 | MS.gene047043:intron | 40.0% | |
| TGCCATATGAGTGATATCTC+TGG | - | chr4.1:214774-214793 | MS.gene047043:intron | 40.0% | |
| TGCTTACAGTTACATACACC+TGG | + | chr4.1:216414-216433 | None:intergenic | 40.0% | |
| TGGAAGATTTACCGGAGAAT+TGG | - | chr4.1:213224-213243 | MS.gene047043:CDS | 40.0% | |
| TTCCCAATGCTGTTAAACAC+GGG | - | chr4.1:213906-213925 | MS.gene047043:intron | 40.0% | |
| TTCCTTCATATTCTGGTAGC+AGG | + | chr4.1:213176-213195 | None:intergenic | 40.0% | |
| TTCCTTTGAGCTTTCTCTTG+TGG | - | chr4.1:214800-214819 | MS.gene047043:intron | 40.0% | |
| TTCTCTTTGAATCCCCAGAT+TGG | + | chr4.1:214231-214250 | None:intergenic | 40.0% | |
| ! | ACTGATTACTGCAAAAGTGC+TGG | - | chr4.1:216859-216878 | MS.gene047043:intron | 40.0% |
| ! | AGAAACATCCATCTTTGGAG+AGG | + | chr4.1:213485-213504 | None:intergenic | 40.0% |
| ! | ATGTTCCGTTGTCATTTACC+TGG | - | chr4.1:215191-215210 | MS.gene047043:intron | 40.0% |
| ! | CAGCAGATTTAGAACACAAG+GGG | + | chr4.1:217040-217059 | None:intergenic | 40.0% |
| ! | CCAAAGATGGATGTTTCTGA+AGG | - | chr4.1:213487-213506 | MS.gene047043:intron | 40.0% |
| ! | GCAGCAGATTTAGAACACAA+GGG | + | chr4.1:217041-217060 | None:intergenic | 40.0% |
| ! | GGAACCCAGATTTTACACAA+AGG | - | chr4.1:214273-214292 | MS.gene047043:intron | 40.0% |
| ! | GTGTTTTGTGATGGTAAAGG+TGG | - | chr4.1:214469-214488 | MS.gene047043:CDS | 40.0% |
| ! | TGCAGCAGATTTAGAACACA+AGG | + | chr4.1:217042-217061 | None:intergenic | 40.0% |
| ! | TTTATTAGCACTGGAGGACT+TGG | - | chr4.1:215093-215112 | MS.gene047043:intron | 40.0% |
| ! | TTTTCATGGTGCAGATTTGC+TGG | - | chr4.1:214959-214978 | MS.gene047043:intron | 40.0% |
| !! | AAAGTACTGGATGTTGGTTG+TGG | - | chr4.1:216114-216133 | MS.gene047043:intron | 40.0% |
| !! | ATCCTTTGGTCTAGTTTGCT+TGG | - | chr4.1:217123-217142 | MS.gene047043:CDS | 40.0% |
| !! | ATGTACTCTGGATTTGTTGC+AGG | - | chr4.1:216774-216793 | MS.gene047043:intron | 40.0% |
| !! | CCTTTTCATTCTTTGGTGAC+TGG | - | chr4.1:215342-215361 | MS.gene047043:intron | 40.0% |
| !! | GATTTGCTGGATATGGCAAA+AGG | - | chr4.1:214972-214991 | MS.gene047043:intron | 40.0% |
| !! | GGAGTGTTTTGTGATGGTAA+AGG | - | chr4.1:214466-214485 | MS.gene047043:CDS | 40.0% |
| !!! | GACTGCTGTGTTTTTAGGTA+AGG | + | chr4.1:215247-215266 | None:intergenic | 40.0% |
| !!! | TTAACGGGAGTGTTTTGTGA+TGG | - | chr4.1:214460-214479 | MS.gene047043:CDS | 40.0% |
| AACTGTGGAGTAATTGCCCA+TGG | - | chr4.1:213669-213688 | MS.gene047043:intron | 45.0% | |
| ACATCCAGTACTTTCTGACC+AGG | + | chr4.1:216108-216127 | None:intergenic | 45.0% | |
| ATCCTGTTTCCACCAATCTG+GGG | - | chr4.1:214216-214235 | MS.gene047043:intron | 45.0% | |
| ATGCTGTTAAACACGGGTAG+TGG | - | chr4.1:213912-213931 | MS.gene047043:intron | 45.0% | |
| CAATAATCTGGCAGAGACCA+AGG | + | chr4.1:214324-214343 | None:intergenic | 45.0% | |
| CGATAGCACGTTCAATAGCA+CGG | + | chr4.1:216221-216240 | None:intergenic | 45.0% | |
| CTACCCGTGTTTAACAGCAT+TGG | + | chr4.1:213912-213931 | None:intergenic | 45.0% | |
| CTCCAGTGCTAATAAAGCCT+TGG | + | chr4.1:215089-215108 | None:intergenic | 45.0% | |
| GAATCCTGTTTCCACCAATC+TGG | - | chr4.1:214214-214233 | MS.gene047043:intron | 45.0% | |
| GACATCAGCGCACAAAAACT+TGG | + | chr4.1:213461-213480 | None:intergenic | 45.0% | |
| GATAAGCAGCGGTGAATCTT+TGG | + | chr4.1:215901-215920 | None:intergenic | 45.0% | |
| GATAGCACGTTCAATAGCAC+GGG | + | chr4.1:216220-216239 | None:intergenic | 45.0% | |
| GCTGAATACATCAAGGAAGG+AGG | - | chr4.1:216901-216920 | MS.gene047043:intron | 45.0% | |
| GTCTTCTCCTTTGTTCATGC+AGG | - | chr4.1:214740-214759 | MS.gene047043:intron | 45.0% | |
| GTTTGTGAAAACACTGCAGC+AGG | - | chr4.1:217208-217227 | MS.gene047043:intron | 45.0% | |
| TACAAGTGGTTGAAACCTGG+AGG | - | chr4.1:216823-216842 | MS.gene047043:intron | 45.0% | |
| TACATACACCTGGGGCTAAA+AGG | + | chr4.1:216404-216423 | None:intergenic | 45.0% | |
| TCAGTTATTGAGCTTGGAGC+CGG | - | chr4.1:213198-213217 | MS.gene047043:CDS | 45.0% | |
| TCCCACAAGAGAAAGCTCAA+AGG | + | chr4.1:214805-214824 | None:intergenic | 45.0% | |
| TCCCTGCTACCAGAATATGA+AGG | - | chr4.1:213171-213190 | MS.gene047043:CDS | 45.0% | |
| TCTAAATCTGCTGCAGATGC+TGG | - | chr4.1:217047-217066 | MS.gene047043:intron | 45.0% | |
| TCTTTGAATCCCCAGATTGG+TGG | + | chr4.1:214228-214247 | None:intergenic | 45.0% | |
| TGATGTCACCTCTCCAAAGA+TGG | - | chr4.1:213474-213493 | MS.gene047043:intron | 45.0% | |
| TGTTGAGGATCGAACTGATC+AGG | - | chr4.1:217092-217111 | MS.gene047043:CDS | 45.0% | |
| TTACGATATGAGCGCGTGTA+TGG | - | chr4.1:215063-215082 | MS.gene047043:intron | 45.0% | |
| TTCTTGGGCAGAAACGACAA+AGG | - | chr4.1:216056-216075 | MS.gene047043:intron | 45.0% | |
| ! | AAAGCCTGGTCAGAAAGTAC+TGG | - | chr4.1:216101-216120 | MS.gene047043:intron | 45.0% |
| ! | ATTCTCAACCTGAAGCACCA+AGG | + | chr4.1:214140-214159 | None:intergenic | 45.0% |
| ! | CAGCATTGGGAAATACTACG+CGG | + | chr4.1:213898-213917 | None:intergenic | 45.0% |
| ! | CGTGCTATTGAACGTGCTAT+CGG | - | chr4.1:216219-216238 | MS.gene047043:intron | 45.0% |
| ! | GCCGGTATTGGAAGATTTAC+CGG | - | chr4.1:213216-213235 | MS.gene047043:CDS | 45.0% |
| ! | GGTTGAAAGTGATTTGGCAG+TGG | - | chr4.1:216513-216532 | MS.gene047043:intron | 45.0% |
| ! | GTGTATAGTGTGGCGGAATT+TGG | + | chr4.1:214040-214059 | None:intergenic | 45.0% |
| ! | TTCTCAACCTGAAGCACCAA+GGG | + | chr4.1:214139-214158 | None:intergenic | 45.0% |
| !! | AAAGGTGGGCTATAGGTCAT+GGG | - | chr4.1:214484-214503 | MS.gene047043:CDS | 45.0% |
| !! | AGCTTTATCCTTTTAGCCCC+AGG | - | chr4.1:216393-216412 | MS.gene047043:CDS | 45.0% |
| !! | CAAGGCTTTATTAGCACTGG+AGG | - | chr4.1:215087-215106 | MS.gene047043:intron | 45.0% |
| !! | GGTCAGAAAGTACTGGATGT+TGG | - | chr4.1:216108-216127 | MS.gene047043:intron | 45.0% |
| !! | TAAAGGTGGGCTATAGGTCA+TGG | - | chr4.1:214483-214502 | MS.gene047043:CDS | 45.0% |
| !! | TGATGGTAAAGGTGGGCTAT+AGG | - | chr4.1:214477-214496 | MS.gene047043:CDS | 45.0% |
| !! | TGGTGCAGATTTGCTGGATA+TGG | - | chr4.1:214965-214984 | MS.gene047043:intron | 45.0% |
| !!! | TGTTTTTCCCTTGGTGCTTC+AGG | - | chr4.1:214129-214148 | MS.gene047043:intron | 45.0% |
| AATTGCTCTCGAGAGCCAGA+AGG | - | chr4.1:217235-217254 | MS.gene047043:intron | 50.0% | |
| AGCTTTCAGCGCCAATTCTC+CGG | + | chr4.1:213238-213257 | None:intergenic | 50.0% | |
| ATCCCCAGATTGGTGGAAAC+AGG | + | chr4.1:214221-214240 | None:intergenic | 50.0% | |
| ATGGAAGGCGAAGCAGATCA+GGG | - | chr4.1:217402-217421 | MS.gene047043:CDS | 50.0% | |
| ATTGAGCTTGGAGCCGGTAT+TGG | - | chr4.1:213204-213223 | MS.gene047043:CDS | 50.0% | |
| CACTGATGAAGTCGTCCTTC+TGG | + | chr4.1:217253-217272 | None:intergenic | 50.0% | |
| GCTAAGCTGGAACTAAAGCC+TGG | - | chr4.1:216087-216106 | MS.gene047043:intron | 50.0% | |
| GCTGAAAGCTGGTCAATTGC+TGG | - | chr4.1:213248-213267 | MS.gene047043:intron | 50.0% | |
| TGGCGGAGGTGATTTCTACA+TGG | - | chr4.1:216140-216159 | MS.gene047043:intron | 50.0% | |
| ! | CTGGATGTTGGTTGTGGTGT+TGG | - | chr4.1:216120-216139 | MS.gene047043:intron | 50.0% |
| ! | GATGTTGGTTGTGGTGTTGG+CGG | - | chr4.1:216123-216142 | MS.gene047043:intron | 50.0% |
| ! | GCTGCGACTGCTGTGTTTTT+AGG | + | chr4.1:215252-215271 | None:intergenic | 50.0% |
| !! | GGCCAAGGCTTTATTAGCAC+TGG | - | chr4.1:215084-215103 | MS.gene047043:intron | 50.0% |
| AAGCAGATCAGGGGTGAACG+AGG | - | chr4.1:217412-217431 | MS.gene047043:CDS | 55.0% | |
| AGCAGATCAGGGGTGAACGA+GGG | - | chr4.1:217413-217432 | MS.gene047043:CDS | 55.0% | |
| CTGCAGATGCTGGAGAATGC+TGG | - | chr4.1:217057-217076 | MS.gene047043:intron | 55.0% | |
| CTGGGTTCCCTGTAGTGAGT+AGG | + | chr4.1:214262-214281 | None:intergenic | 55.0% | |
| GATGGAAGGCGAAGCAGATC+AGG | - | chr4.1:217401-217420 | MS.gene047043:CDS | 55.0% | |
| TATGAGCGCGTGTATGGCCA+AGG | - | chr4.1:215069-215088 | MS.gene047043:intron | 55.0% | |
| TGAACGAGGGGAGCAGAAGT+GGG | - | chr4.1:217426-217445 | MS.gene047043:CDS | 55.0% | |
| TGGAAGGCGAAGCAGATCAG+GGG | - | chr4.1:217403-217422 | MS.gene047043:CDS | 55.0% | |
| ! | AGCTGGTCAATTGCTGGCTG+TGG | - | chr4.1:213254-213273 | MS.gene047043:intron | 55.0% |
| ! | GGAGAATTGGCGCTGAAAGC+TGG | - | chr4.1:213237-213256 | MS.gene047043:CDS | 55.0% |
| ! | TCAGCGAGAAGCGTGTGATC+AGG | - | chr4.1:215674-215693 | MS.gene047043:intron | 55.0% |
| GAACGAGGGGAGCAGAAGTG+GGG | - | chr4.1:217427-217446 | MS.gene047043:CDS | 60.0% | |
| GCAGATCAGGGGTGAACGAG+GGG | - | chr4.1:217414-217433 | MS.gene047043:CDS | 60.0% | |
| GTGAACGAGGGGAGCAGAAG+TGG | - | chr4.1:217425-217444 | MS.gene047043:CDS | 60.0% | |
| !! | GTTGGTTGTGGTGTTGGCGG+AGG | - | chr4.1:216126-216145 | MS.gene047043:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 213165 | 217474 | 213165 | ID=MS.gene047043 |
| chr4.1 | mRNA | 213165 | 217474 | 213165 | ID=MS.gene047043.t1;Parent=MS.gene047043 |
| chr4.1 | exon | 217337 | 217474 | 217337 | ID=MS.gene047043.t1.exon1;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 217337 | 217474 | 217337 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 217075 | 217212 | 217075 | ID=MS.gene047043.t1.exon2;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 217075 | 217212 | 217075 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 216345 | 216488 | 216345 | ID=MS.gene047043.t1.exon3;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 216345 | 216488 | 216345 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 215767 | 215877 | 215767 | ID=MS.gene047043.t1.exon4;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 215767 | 215877 | 215767 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 215525 | 215666 | 215525 | ID=MS.gene047043.t1.exon5;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 215525 | 215666 | 215525 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 214292 | 214572 | 214292 | ID=MS.gene047043.t1.exon6;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 214292 | 214572 | 214292 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 213682 | 213843 | 213682 | ID=MS.gene047043.t1.exon7;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 213682 | 213843 | 213682 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 213526 | 213576 | 213526 | ID=MS.gene047043.t1.exon8;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 213526 | 213576 | 213526 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 213356 | 213430 | 213356 | ID=MS.gene047043.t1.exon9;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 213356 | 213430 | 213356 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| chr4.1 | exon | 213165 | 213263 | 213165 | ID=MS.gene047043.t1.exon10;Parent=MS.gene047043.t1 |
| chr4.1 | CDS | 213165 | 213263 | 213165 | ID=cds.MS.gene047043.t1;Parent=MS.gene047043.t1 |
| Gene Sequence |
| Protein sequence |
