Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066974.t1 | XP_003619836.1 | 97.2 | 497 | 14 | 0 | 1 | 497 | 1 | 497 | 2.20E-286 | 994.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066974.t1 | Q9M571 | 72.6 | 493 | 135 | 0 | 4 | 496 | 1 | 493 | 5.0e-215 | 748.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066974.t1 | G7KPT7 | 97.2 | 497 | 14 | 0 | 1 | 497 | 1 | 497 | 1.6e-286 | 994.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene066974 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene066974 | 0.816391 | 5.67E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene066974 | 0.805213 | 1.49E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene066974 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene050787 | MS.gene066974 | 0.8641 | 1.55E-64 | -1.69E-46 |
| MS.gene051173 | MS.gene066974 | 0.814407 | 1.57E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene066974 | 0.825728 | 4.00E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene066974 | 0.819507 | 1.12E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene066974 | 0.80653 | 7.87E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene066974 | 0.832303 | 1.02E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene066974 | 0.836934 | 6.99E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene066974 | 0.849612 | 2.89E-60 | -1.69E-46 |
| MS.gene055356 | MS.gene066974 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene066974 | 0.821768 | 3.39E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene066974 | 0.815107 | 1.09E-51 | -1.69E-46 |
| MS.gene058792 | MS.gene066974 | 0.819737 | 9.92E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene066974 | -0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene066974 | -0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene066974 | -0.805445 | 1.33E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042859 | MS.gene066974 | PPI |
| MS.gene82097 | MS.gene066974 | PPI |
| MS.gene040109 | MS.gene066974 | PPI |
| MS.gene047043 | MS.gene066974 | PPI |
| MS.gene066974 | MS.gene042859 | PPI |
| MS.gene93748 | MS.gene066974 | PPI |
| MS.gene047006 | MS.gene066974 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066974.t1 | MTR_6g069600 | 97.183 | 497 | 14 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1010 |
| MS.gene066974.t1 | MTR_8g107370 | 79.839 | 496 | 97 | 2 | 1 | 496 | 1 | 493 | 0.0 | 800 |
| MS.gene066974.t1 | MTR_8g107370 | 80.992 | 484 | 91 | 1 | 13 | 496 | 5 | 487 | 0.0 | 800 |
| MS.gene066974.t1 | MTR_8g107370 | 79.741 | 464 | 91 | 2 | 1 | 464 | 1 | 461 | 0.0 | 746 |
| MS.gene066974.t1 | MTR_8g107370 | 80.638 | 439 | 82 | 2 | 1 | 439 | 1 | 436 | 0.0 | 716 |
| MS.gene066974.t1 | MTR_1g014690 | 32.075 | 106 | 70 | 1 | 290 | 393 | 75 | 180 | 2.68e-12 | 68.2 |
| MS.gene066974.t1 | MTR_1g014690 | 32.075 | 106 | 70 | 1 | 290 | 393 | 130 | 235 | 3.29e-12 | 68.2 |
| MS.gene066974.t1 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 86 | 201 | 1.51e-11 | 66.2 |
| MS.gene066974.t1 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 43 | 158 | 1.68e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066974.t1 | AT1G73600 | 71.281 | 484 | 139 | 0 | 13 | 496 | 20 | 503 | 0.0 | 748 |
| MS.gene066974.t1 | AT1G73600 | 71.281 | 484 | 139 | 0 | 13 | 496 | 6 | 489 | 0.0 | 748 |
| MS.gene066974.t1 | AT3G18000 | 70.612 | 490 | 144 | 0 | 7 | 496 | 1 | 490 | 0.0 | 743 |
| MS.gene066974.t1 | AT1G48600 | 71.399 | 486 | 139 | 0 | 12 | 497 | 6 | 491 | 0.0 | 743 |
| MS.gene066974.t1 | AT1G48600 | 71.941 | 474 | 133 | 0 | 24 | 497 | 2 | 475 | 0.0 | 725 |
| MS.gene066974.t1 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 5.23e-13 | 70.5 |
| MS.gene066974.t1 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 5.23e-13 | 70.5 |
| MS.gene066974.t1 | AT1G64970 | 29.808 | 104 | 71 | 1 | 292 | 393 | 130 | 233 | 4.52e-11 | 64.7 |
Find 85 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTCTATGAACATGTTTA+TGG | 0.176357 | 6.4:+47744313 | MS.gene066974:CDS |
| CCTTACTTTGATGTGTAATA+AGG | 0.238801 | 6.4:-47744992 | None:intergenic |
| TGCTGTTGATCAAACCAATT+TGG | 0.240782 | 6.4:+47745751 | MS.gene066974:CDS |
| AGCTAGAGAAATCATGTTTA+TGG | 0.260404 | 6.4:-47744863 | None:intergenic |
| TCCTTTGAGCTTTCTCTTGT+GGG | 0.294619 | 6.4:+47744034 | MS.gene066974:CDS |
| TCATTCATATATGGCTAGTT+TGG | 0.295245 | 6.4:+47740762 | None:intergenic |
| GTGTAGCTGGTGAGCAGATA+TGG | 0.296797 | 6.4:+47746457 | MS.gene066974:CDS |
| AGGGAAATTGTGGCAAAGTT+AGG | 0.296952 | 6.4:+47744736 | MS.gene066974:CDS |
| CTAGATGTTGGTTGTGGTAT+TGG | 0.308873 | 6.4:+47744781 | MS.gene066974:CDS |
| ACATGAACTTGACATTCTTT+TGG | 0.312965 | 6.4:-47743082 | None:intergenic |
| TCATGCAGATTTGTTGGATA+TGG | 0.335290 | 6.4:+47744215 | MS.gene066974:intron |
| TTGCAGAATGAAAATACTAA+TGG | 0.336708 | 6.4:+47743056 | MS.gene066974:intron |
| CCTTCAGAAATATGCAAGTT+TGG | 0.339863 | 6.4:-47743122 | None:intergenic |
| TGGAAGATTTACAACTGAAT+TGG | 0.343234 | 6.4:+47742683 | MS.gene066974:CDS |
| AATACAATCCAACTCACTAT+AGG | 0.347505 | 6.4:+47743644 | MS.gene066974:CDS |
| GAATCTTGTTTCCACCAATC+TGG | 0.358429 | 6.4:+47743607 | MS.gene066974:CDS |
| TCTTTGTCATGCAGATTTGT+TGG | 0.362351 | 6.4:+47744209 | MS.gene066974:intron |
| GTTAAATCACAAGATGATAG+AGG | 0.369519 | 6.4:+47744244 | MS.gene066974:CDS |
| GTCTCTCTTCTTTGTCGAGA+TGG | 0.371915 | 6.4:-47741086 | None:intergenic |
| CTCCTTTGAGCTTTCTCTTG+TGG | 0.372126 | 6.4:+47744033 | MS.gene066974:CDS |
| TTGGTTACTCATGTATCTTT+CGG | 0.382805 | 6.4:+47743169 | MS.gene066974:CDS |
| ATACAATCCAACTCACTATA+GGG | 0.384922 | 6.4:+47743645 | MS.gene066974:CDS |
| GAGTGTGTGACAAACCAAAT+TGG | 0.399779 | 6.4:-47745765 | None:intergenic |
| CAAACCTTAGTGTAAAATCT+TGG | 0.404604 | 6.4:-47743670 | None:intergenic |
| TTAGAGCTTGGAGCAGGTAT+TGG | 0.405980 | 6.4:+47742663 | MS.gene066974:CDS |
| GTTCTTGAAAACTCTACAAA+TGG | 0.411827 | 6.4:+47745856 | MS.gene066974:intron |
| GTCAAATGGTTAAATGTTGA+TGG | 0.412539 | 6.4:+47743568 | MS.gene066974:CDS |
| TGACATGAAAGCATATTATC+AGG | 0.414876 | 6.4:+47745237 | MS.gene066974:CDS |
| TCTCTCTTCTTTGTCGAGAT+GGG | 0.418673 | 6.4:-47741085 | None:intergenic |
| ACTGAATTGGCTCAGAAAGC+TGG | 0.429992 | 6.4:+47742696 | MS.gene066974:CDS |
| GTGAAGTGCAGAGAAGTTAC+TGG | 0.432592 | 6.4:+47741007 | MS.gene066974:CDS |
| TCACAGATGCTTGAGAATGC+TGG | 0.438992 | 6.4:+47745713 | MS.gene066974:intron |
| TTCTCTTTGAATCTCCAGAT+TGG | 0.440419 | 6.4:-47743621 | None:intergenic |
| CATAGAGTAAGATATCCTTA+TGG | 0.446251 | 6.4:-47744300 | None:intergenic |
| GGGAAATTGTGGCAAAGTTA+GGG | 0.450059 | 6.4:+47744737 | MS.gene066974:CDS |
| TTTGTGAGCACAGGAGGACT+TGG | 0.457900 | 6.4:+47744343 | MS.gene066974:CDS |
| TGTAGCTGGTGAGCAGATAT+GGG | 0.458742 | 6.4:+47746458 | MS.gene066974:CDS |
| TAAAATGATCTGAACAATGT+TGG | 0.463358 | 6.4:-47745103 | None:intergenic |
| TATCTGAAAGGATGGTCAAA+TGG | 0.473842 | 6.4:+47743554 | MS.gene066974:CDS |
| ATAATGAAATTGTTGAAAGA+TGG | 0.474872 | 6.4:+47746415 | MS.gene066974:CDS |
| TCTTTGAATCTCCAGATTGG+TGG | 0.475051 | 6.4:-47743618 | None:intergenic |
| AAATAAGAAGAATCAAAATC+AGG | 0.476569 | 6.4:+47744084 | MS.gene066974:CDS |
| GTCATATGAGTGATGGTAAT+GGG | 0.483689 | 6.4:+47744008 | MS.gene066974:CDS |
| CTGAATTGGCTCAGAAAGCT+GGG | 0.489249 | 6.4:+47742697 | MS.gene066974:CDS |
| TTTGTCGAGATGGGAGGCGT+TGG | 0.492887 | 6.4:-47741076 | None:intergenic |
| TCTCTATTACCATCATATGA+AGG | 0.495751 | 6.4:+47742630 | MS.gene066974:CDS |
| CTTGGTTCCCTATAGTGAGT+TGG | 0.500725 | 6.4:-47743652 | None:intergenic |
| TATGAACATGTTTATGGTCA+AGG | 0.501805 | 6.4:+47744319 | MS.gene066974:CDS |
| GATAATATGCTTTCATGTCA+TGG | 0.509905 | 6.4:-47745234 | None:intergenic |
| AATCAACCTTCTTGTTCTCA+AGG | 0.512925 | 6.4:-47745889 | None:intergenic |
| ACTGACTATTGCAAAAGTGT+TGG | 0.520445 | 6.4:+47745160 | MS.gene066974:CDS |
| CTAGCTATCGAACGTGCCAT+CGG | 0.524887 | 6.4:+47744880 | MS.gene066974:CDS |
| AAGCAGATGAGAGGTGTAGC+TGG | 0.525626 | 6.4:+47746444 | MS.gene066974:CDS |
| CCAAACTTGCATATTTCTGA+AGG | 0.528360 | 6.4:+47743122 | MS.gene066974:CDS |
| GGTCAAGGCTTTGTGAGCAC+AGG | 0.534562 | 6.4:+47744334 | MS.gene066974:CDS |
| CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 6.4:+47742740 | MS.gene066974:CDS |
| TAGTGTTGAGTATAACCATA+AGG | 0.541790 | 6.4:+47744285 | MS.gene066974:CDS |
| GTAATTAAAAGTGTACCTCC+AGG | 0.542732 | 6.4:-47745139 | None:intergenic |
| AGCTGGGCAATTGCTTGCTG+TGG | 0.543614 | 6.4:+47742713 | MS.gene066974:CDS |
| CTCTTCTTTGTCGAGATGGG+AGG | 0.545903 | 6.4:-47741082 | None:intergenic |
| GTTGGTTGTGGTATTGGAGG+AGG | 0.549538 | 6.4:+47744787 | MS.gene066974:CDS |
| CTTGTGGGATGCAAATGCAT+TGG | 0.550546 | 6.4:+47744049 | MS.gene066974:CDS |
| CAAGGCTTTGTGAGCACAGG+AGG | 0.555847 | 6.4:+47744337 | MS.gene066974:CDS |
| GATGTTGGTTGTGGTATTGG+AGG | 0.557635 | 6.4:+47744784 | MS.gene066974:CDS |
| ATCAACCTTCTTGTTCTCAA+GGG | 0.563447 | 6.4:-47745888 | None:intergenic |
| TTAAATCACAAGATGATAGA+GGG | 0.564358 | 6.4:+47744245 | MS.gene066974:CDS |
| AGAAACAACAAGGGAAATTG+TGG | 0.570096 | 6.4:+47744726 | MS.gene066974:intron |
| TAGTGCATATTTGAGTCCGA+TGG | 0.573475 | 6.4:-47744896 | None:intergenic |
| CATGTATCTTTCGGATGAAG+AGG | 0.574088 | 6.4:+47743178 | MS.gene066974:CDS |
| ATTCTTGAGCAGAAACAACA+AGG | 0.575658 | 6.4:+47744716 | MS.gene066974:intron |
| TGAAATTGTTGAAAGATGGA+AGG | 0.578969 | 6.4:+47746419 | MS.gene066974:CDS |
| AAATGCCCTTGAGAACAAGA+AGG | 0.581850 | 6.4:+47745883 | MS.gene066974:CDS |
| TGTCATATGAGTGATGGTAA+TGG | 0.587135 | 6.4:+47744007 | MS.gene066974:CDS |
| AAAGAGTGTCATATGAGTGA+TGG | 0.594358 | 6.4:+47744001 | MS.gene066974:CDS |
| AAAGTACTAGATGTTGGTTG+TGG | 0.613287 | 6.4:+47744775 | MS.gene066974:CDS |
| GCAAAGTTAGGGCTAAAGCC+AGG | 0.617210 | 6.4:+47744748 | MS.gene066974:CDS |
| GAGAAATCATGTTTATGGAG+AGG | 0.618544 | 6.4:-47744858 | None:intergenic |
| AAGATGATAGAGGGTTTCAA+CGG | 0.629674 | 6.4:+47744254 | MS.gene066974:CDS |
| TGGAAGGCTAAGCAGATGAG+AGG | 0.635467 | 6.4:+47746435 | MS.gene066974:CDS |
| TTCTTGAGCAGAAACAACAA+GGG | 0.645125 | 6.4:+47744717 | MS.gene066974:intron |
| AGTTTGGAAGCAATGAAACA+AGG | 0.646586 | 6.4:+47740778 | MS.gene066974:CDS |
| TCCCACAAGAGAAAGCTCAA+AGG | 0.650134 | 6.4:-47744035 | None:intergenic |
| TATAAGTGGTTGAAGCCTGG+AGG | 0.668799 | 6.4:+47745124 | MS.gene066974:CDS |
| GTAGCTGGTGAGCAGATATG+GGG | 0.669642 | 6.4:+47746459 | MS.gene066974:CDS |
| TTTCATTGATGATTTCTCTG+AGG | 0.680525 | 6.4:+47745910 | MS.gene066974:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATAAAATAAAAT+AGG | + | chr6.4:47742990-47743009 | MS.gene066974:intron | 0.0% |
| !! | AATAAGTTAAAAAATATGAT+AGG | - | chr6.4:47742388-47742407 | None:intergenic | 10.0% |
| !! | AATTTGATATGTAATAATTT+AGG | + | chr6.4:47745337-47745356 | MS.gene066974:intron | 10.0% |
| !! | ATTTGATATGTAATAATTTA+GGG | + | chr6.4:47745338-47745357 | MS.gene066974:intron | 10.0% |
| !! | CATAAATATACATTTAAATT+GGG | - | chr6.4:47741625-47741644 | None:intergenic | 10.0% |
| !!! | AAAAAAGTGTATTTTTTTTA+AGG | - | chr6.4:47741203-47741222 | None:intergenic | 10.0% |
| !!! | ATGAATAATTAGATTTTAAT+CGG | - | chr6.4:47743290-47743309 | None:intergenic | 10.0% |
| !!! | TGATTTTTTCAAATTATTAA+TGG | - | chr6.4:47745468-47745487 | None:intergenic | 10.0% |
| !!! | TTTTAATGGTAAATATTAAT+AGG | - | chr6.4:47741309-47741328 | None:intergenic | 10.0% |
| !! | AAATAATGTATTATATTGCA+TGG | + | chr6.4:47740892-47740911 | MS.gene066974:intron | 15.0% |
| !! | AATGTTCAATGAATTTATAT+AGG | + | chr6.4:47745075-47745094 | MS.gene066974:intron | 15.0% |
| !! | AATTTAAAAAATGTTCCTAA+AGG | - | chr6.4:47744404-47744423 | None:intergenic | 15.0% |
| !! | ACAACTTGTATTAAATATAA+AGG | + | chr6.4:47741783-47741802 | MS.gene066974:intron | 15.0% |
| !! | ATATAATTACAATAACAAGA+AGG | - | chr6.4:47745270-47745289 | None:intergenic | 15.0% |
| !! | ATATATAATTCATTTCCTTT+AGG | + | chr6.4:47744386-47744405 | MS.gene066974:intron | 15.0% |
| !! | ATTAGATTATACATAGATTA+AGG | + | chr6.4:47740929-47740948 | MS.gene066974:intron | 15.0% |
| !! | CAAAATAAATGTAGAAAATA+AGG | - | chr6.4:47743930-47743949 | None:intergenic | 15.0% |
| !! | CAACTTGTATTAAATATAAA+GGG | + | chr6.4:47741784-47741803 | MS.gene066974:intron | 15.0% |
| !! | CCAATTTAAATGTATATTTA+TGG | + | chr6.4:47741623-47741642 | MS.gene066974:intron | 15.0% |
| !! | CCATAAATATACATTTAAAT+TGG | - | chr6.4:47741626-47741645 | None:intergenic | 15.0% |
| !! | TAATAGTAATCAATAATTAC+AGG | - | chr6.4:47742517-47742536 | None:intergenic | 15.0% |
| !! | TAGTATAAAACAAAGTAATA+AGG | - | chr6.4:47745790-47745809 | None:intergenic | 15.0% |
| !! | TATGTAAGAATTCTAATAAA+TGG | - | chr6.4:47744508-47744527 | None:intergenic | 15.0% |
| !! | TGATTCAAAAAAAATACAAA+TGG | - | chr6.4:47744651-47744670 | None:intergenic | 15.0% |
| !! | TGTTATTATTATATTCTAAG+TGG | + | chr6.4:47742482-47742501 | MS.gene066974:intron | 15.0% |
| !! | TTTCTCAAATTATTACTATT+AGG | + | chr6.4:47742890-47742909 | MS.gene066974:intron | 15.0% |
| !!! | AATATTTTGTTTTACTACTA+CGG | + | chr6.4:47743203-47743222 | MS.gene066974:intron | 15.0% |
| !!! | ATCAATTTTAAATTACATGT+AGG | + | chr6.4:47742602-47742621 | MS.gene066974:intron | 15.0% |
| !!! | CTCATATTTAACTTTTTTTT+TGG | + | chr6.4:47742353-47742372 | MS.gene066974:intron | 15.0% |
| !!! | TAATAGGTTAATTTTTTGAA+GGG | - | chr6.4:47741293-47741312 | None:intergenic | 15.0% |
| !!! | TCTTTTATGTTGTTAATTAT+AGG | + | chr6.4:47742068-47742087 | MS.gene066974:intron | 15.0% |
| !!! | TTAATAGGTTAATTTTTTGA+AGG | - | chr6.4:47741294-47741313 | None:intergenic | 15.0% |
| !!! | TTAGAATTTACTTTTTATGA+TGG | + | chr6.4:47742229-47742248 | MS.gene066974:intron | 15.0% |
| !!! | TTGATTTGATATTTTCAAAT+TGG | + | chr6.4:47743150-47743169 | MS.gene066974:CDS | 15.0% |
| !!! | TTTCTTTTCTTTCTATATAA+AGG | + | chr6.4:47741233-47741252 | MS.gene066974:intron | 15.0% |
| !!! | TTTTTATAAACTCTGAAAAT+TGG | + | chr6.4:47746080-47746099 | MS.gene066974:intron | 15.0% |
| !!! | TTTTTGAAATCTTCATTTTT+AGG | + | chr6.4:47746386-47746405 | MS.gene066974:intron | 15.0% |
| !! | AAATAAGAAGAATCAAAATC+AGG | + | chr6.4:47744084-47744103 | MS.gene066974:CDS | 20.0% |
| !! | AAATTAGACACATACATTAA+GGG | - | chr6.4:47743440-47743459 | None:intergenic | 20.0% |
| !! | AACAACATAAAAGAAAATTG+TGG | - | chr6.4:47742062-47742081 | None:intergenic | 20.0% |
| !! | ACAACATAAAAGAAAATTGT+GGG | - | chr6.4:47742061-47742080 | None:intergenic | 20.0% |
| !! | ACTAACAGAATTATGTTTAT+GGG | + | chr6.4:47742286-47742305 | MS.gene066974:intron | 20.0% |
| !! | AGAAAAAAAATTAGAAGTGA+AGG | - | chr6.4:47742335-47742354 | None:intergenic | 20.0% |
| !! | AGGAAATGAATTATATATCA+TGG | - | chr6.4:47744384-47744403 | None:intergenic | 20.0% |
| !! | AGGTTAAAAATTTATCTGAA+AGG | + | chr6.4:47743542-47743561 | MS.gene066974:intron | 20.0% |
| !! | ATAATGAAATTGTTGAAAGA+TGG | + | chr6.4:47746415-47746434 | MS.gene066974:CDS | 20.0% |
| !! | ATCGAATTTCAAATAGAAAT+TGG | - | chr6.4:47743316-47743335 | None:intergenic | 20.0% |
| !! | ATTATTAAAATCGAGAGTTT+AGG | - | chr6.4:47746166-47746185 | None:intergenic | 20.0% |
| !! | ATTCTGCAAAAATATTGTAA+AGG | - | chr6.4:47743045-47743064 | None:intergenic | 20.0% |
| !! | CAAAAAAGGAAAAAACAATT+TGG | - | chr6.4:47745039-47745058 | None:intergenic | 20.0% |
| !! | CAATATGAATCCAATATTTA+TGG | + | chr6.4:47741490-47741509 | MS.gene066974:intron | 20.0% |
| !! | CATAAATATTGGATTCATAT+TGG | - | chr6.4:47741492-47741511 | None:intergenic | 20.0% |
| !! | GAAAAACACAGATAATAAAA+TGG | - | chr6.4:47745815-47745834 | None:intergenic | 20.0% |
| !! | GAAATGAATTATATATCATG+GGG | - | chr6.4:47744382-47744401 | None:intergenic | 20.0% |
| !! | GAATAGTTAGTTAGTTATAT+AGG | - | chr6.4:47741146-47741165 | None:intergenic | 20.0% |
| !! | GGAAATGAATTATATATCAT+GGG | - | chr6.4:47744383-47744402 | None:intergenic | 20.0% |
| !! | GTGCTACATAAATATTTATA+CGG | - | chr6.4:47742787-47742806 | None:intergenic | 20.0% |
| !! | TAAAAATTTATCTGAAAGGA+TGG | + | chr6.4:47743546-47743565 | MS.gene066974:CDS | 20.0% |
| !! | TAAATTAGACACATACATTA+AGG | - | chr6.4:47743441-47743460 | None:intergenic | 20.0% |
| !! | TACATCAAAATTTAAGAGTT+TGG | - | chr6.4:47746332-47746351 | None:intergenic | 20.0% |
| !! | TGCTACATAAATATTTATAC+GGG | - | chr6.4:47742786-47742805 | None:intergenic | 20.0% |
| !! | TTAAATACCTACATGAAAAA+GGG | - | chr6.4:47743983-47744002 | None:intergenic | 20.0% |
| !! | TTAGTTAGTTATATAGGATT+AGG | - | chr6.4:47741140-47741159 | None:intergenic | 20.0% |
| !! | TTCTGCAAAAATATTGTAAA+GGG | - | chr6.4:47743044-47743063 | None:intergenic | 20.0% |
| !! | TTTAAATACCTACATGAAAA+AGG | - | chr6.4:47743984-47744003 | None:intergenic | 20.0% |
| !! | TTTCAAATTATTAATGGTGT+CGG | - | chr6.4:47745462-47745481 | None:intergenic | 20.0% |
| !!! | AAGTAAGGGATATTTTTATT+TGG | + | chr6.4:47745007-47745026 | MS.gene066974:intron | 20.0% |
| !!! | AGATCTACATTTTACTAATT+TGG | + | chr6.4:47742025-47742044 | MS.gene066974:intron | 20.0% |
| !!! | AGTACACACATTTTTTTTAA+TGG | - | chr6.4:47741323-47741342 | None:intergenic | 20.0% |
| !!! | ATCTACATTTTACTAATTTG+GGG | + | chr6.4:47742027-47742046 | MS.gene066974:intron | 20.0% |
| !!! | ATTAAAGGATAAGATTTTGT+CGG | + | chr6.4:47741821-47741840 | MS.gene066974:intron | 20.0% |
| !!! | GACTTTTCTTTTTATCATTA+TGG | + | chr6.4:47745290-47745309 | MS.gene066974:intron | 20.0% |
| !!! | GATCTACATTTTACTAATTT+GGG | + | chr6.4:47742026-47742045 | MS.gene066974:intron | 20.0% |
| !!! | TTTAAATTGGGTTTTTTAGT+AGG | - | chr6.4:47741613-47741632 | None:intergenic | 20.0% |
| !!! | TTTTAACCTGAAATTAATCA+AGG | - | chr6.4:47743531-47743550 | None:intergenic | 20.0% |
| ! | AACATAAAAGAAAATTGTGG+GGG | - | chr6.4:47742059-47742078 | None:intergenic | 25.0% |
| ! | ATATTTATGGTGAGTTTGAT+CGG | + | chr6.4:47741636-47741655 | MS.gene066974:intron | 25.0% |
| ! | ATGGTAAAGACATGTTATAA+GGG | + | chr6.4:47743861-47743880 | MS.gene066974:intron | 25.0% |
| ! | CAACATAAAAGAAAATTGTG+GGG | - | chr6.4:47742060-47742079 | None:intergenic | 25.0% |
| ! | CACATCTTCAATATAAAGTT+TGG | - | chr6.4:47742809-47742828 | None:intergenic | 25.0% |
| ! | CACTAACAGAATTATGTTTA+TGG | + | chr6.4:47742285-47742304 | MS.gene066974:intron | 25.0% |
| ! | CATAAACATAATTCTGTTAG+TGG | - | chr6.4:47742287-47742306 | None:intergenic | 25.0% |
| ! | CATGTATATGTAGAAATTAC+TGG | + | chr6.4:47740955-47740974 | MS.gene066974:intron | 25.0% |
| ! | CCTATACAGATATTTGAAAA+CGG | - | chr6.4:47746245-47746264 | None:intergenic | 25.0% |
| ! | CTTATTACACATCAAAGTAA+GGG | + | chr6.4:47744993-47745012 | MS.gene066974:intron | 25.0% |
| ! | GAATCCAATATTTATGGATT+TGG | + | chr6.4:47741496-47741515 | MS.gene066974:intron | 25.0% |
| ! | TAAAATGATCTGAACAATGT+TGG | - | chr6.4:47745106-47745125 | None:intergenic | 25.0% |
| ! | TAGAAAATAAGGCTTATGAA+GGG | - | chr6.4:47743919-47743938 | None:intergenic | 25.0% |
| ! | TAGTGAAATCGAAATTTCAA+CGG | + | chr6.4:47743337-47743356 | MS.gene066974:intron | 25.0% |
| ! | TATCCAATTGTTATAATCGA+TGG | - | chr6.4:47744471-47744490 | None:intergenic | 25.0% |
| ! | TGATCCAAATCCATAAATAT+TGG | - | chr6.4:47741503-47741522 | None:intergenic | 25.0% |
| ! | TTAAATCACAAGATGATAGA+GGG | + | chr6.4:47744245-47744264 | MS.gene066974:CDS | 25.0% |
| ! | TTACTCTATGAACATGTTTA+TGG | + | chr6.4:47744313-47744332 | MS.gene066974:CDS | 25.0% |
| ! | TTATGCAAGTTTACAATTGT+TGG | + | chr6.4:47746019-47746038 | MS.gene066974:intron | 25.0% |
| ! | TTCAAATTATTAATGGTGTC+GGG | - | chr6.4:47745461-47745480 | None:intergenic | 25.0% |
| ! | TTCATTGTAATTACATGTGT+CGG | + | chr6.4:47745493-47745512 | MS.gene066974:intron | 25.0% |
| ! | TTGCAGAATGAAAATACTAA+TGG | + | chr6.4:47743056-47743075 | MS.gene066974:intron | 25.0% |
| !! | AAACCATCGATTATAACAAT+TGG | + | chr6.4:47744465-47744484 | MS.gene066974:intron | 25.0% |
| !! | CCAATTTTATCCTGTTTTAT+CGG | + | chr6.4:47741587-47741606 | MS.gene066974:intron | 25.0% |
| !! | TGTTCAGATCATTTTATAAG+TGG | + | chr6.4:47745110-47745129 | MS.gene066974:CDS | 25.0% |
| !! | TTTTTGCCTTGATTAATTTC+AGG | + | chr6.4:47743522-47743541 | MS.gene066974:intron | 25.0% |
| !!! | ATTACTGGAATGATTTTTTC+AGG | + | chr6.4:47740970-47740989 | MS.gene066974:intron | 25.0% |
| AAAGCCTTAACAAAAAGTGA+TGG | - | chr6.4:47743500-47743519 | None:intergenic | 30.0% | |
| AAATATAAAGGGTCGTATTG+TGG | + | chr6.4:47741795-47741814 | MS.gene066974:intron | 30.0% | |
| AAATTAGTAGCACATACTTC+GGG | - | chr6.4:47741111-47741130 | None:intergenic | 30.0% | |
| AATACAATCCAACTCACTAT+AGG | + | chr6.4:47743644-47743663 | MS.gene066974:CDS | 30.0% | |
| AGCTAGAGAAATCATGTTTA+TGG | - | chr6.4:47744866-47744885 | None:intergenic | 30.0% | |
| ATAATCGACATGAAATCAGA+CGG | - | chr6.4:47744606-47744625 | None:intergenic | 30.0% | |
| ATACAATCCAACTCACTATA+GGG | + | chr6.4:47743645-47743664 | MS.gene066974:CDS | 30.0% | |
| CAAACCTTAGTGTAAAATCT+TGG | - | chr6.4:47743673-47743692 | None:intergenic | 30.0% | |
| CATACATTAAGGGACAAAAA+CGG | - | chr6.4:47743430-47743449 | None:intergenic | 30.0% | |
| CATAGAGTAAGATATCCTTA+TGG | - | chr6.4:47744303-47744322 | None:intergenic | 30.0% | |
| CATGCCAATTATATTTGGAT+GGG | + | chr6.4:47741402-47741421 | MS.gene066974:intron | 30.0% | |
| CCGATAAAACAGGATAAAAT+TGG | - | chr6.4:47741590-47741609 | None:intergenic | 30.0% | |
| CCTTACTTTGATGTGTAATA+AGG | - | chr6.4:47744995-47745014 | None:intergenic | 30.0% | |
| CCTTATTACACATCAAAGTA+AGG | + | chr6.4:47744992-47745011 | MS.gene066974:intron | 30.0% | |
| GAAATTAGTAGCACATACTT+CGG | - | chr6.4:47741112-47741131 | None:intergenic | 30.0% | |
| GATAATATGCTTTCATGTCA+TGG | - | chr6.4:47745237-47745256 | None:intergenic | 30.0% | |
| GATGGTAAAGACATGTTATA+AGG | + | chr6.4:47743860-47743879 | MS.gene066974:intron | 30.0% | |
| GCAGAGTATATAAAAAAGAG+AGG | + | chr6.4:47745202-47745221 | MS.gene066974:CDS | 30.0% | |
| GCTAAAATGAAACAATGAGA+CGG | - | chr6.4:47746223-47746242 | None:intergenic | 30.0% | |
| GTAGAAAATAAGGCTTATGA+AGG | - | chr6.4:47743920-47743939 | None:intergenic | 30.0% | |
| GTCAAATGGTTAAATGTTGA+TGG | + | chr6.4:47743568-47743587 | MS.gene066974:CDS | 30.0% | |
| GTCGTATTGTGGTTTATTAA+AGG | + | chr6.4:47741806-47741825 | MS.gene066974:intron | 30.0% | |
| GTTAAATCACAAGATGATAG+AGG | + | chr6.4:47744244-47744263 | MS.gene066974:CDS | 30.0% | |
| GTTCTTGAAAACTCTACAAA+TGG | + | chr6.4:47745856-47745875 | MS.gene066974:intron | 30.0% | |
| TACACCATGCCAATTATATT+TGG | + | chr6.4:47741397-47741416 | MS.gene066974:intron | 30.0% | |
| TATATTCTAAGTGGAGAACA+AGG | + | chr6.4:47742491-47742510 | MS.gene066974:intron | 30.0% | |
| TATGAACATGTTTATGGTCA+AGG | + | chr6.4:47744319-47744338 | MS.gene066974:CDS | 30.0% | |
| TCTCTATTACCATCATATGA+AGG | + | chr6.4:47742630-47742649 | MS.gene066974:CDS | 30.0% | |
| TGAAATTGTTGAAAGATGGA+AGG | + | chr6.4:47746419-47746438 | MS.gene066974:CDS | 30.0% | |
| TGGAAGATTTACAACTGAAT+TGG | + | chr6.4:47742683-47742702 | MS.gene066974:CDS | 30.0% | |
| TTGGTTACTCATGTATCTTT+CGG | + | chr6.4:47743169-47743188 | MS.gene066974:CDS | 30.0% | |
| ! | ACATGAACTTGACATTCTTT+TGG | - | chr6.4:47743085-47743104 | None:intergenic | 30.0% |
| ! | ATCAAAAAGTACAACGTTGT+TGG | + | chr6.4:47740854-47740873 | MS.gene066974:intron | 30.0% |
| ! | ATTACATCGAATGTTTTCTC+AGG | - | chr6.4:47744958-47744977 | None:intergenic | 30.0% |
| ! | CATGTTGTTTGTATTGTGTT+TGG | + | chr6.4:47742913-47742932 | MS.gene066974:intron | 30.0% |
| ! | CCGTTTTCAAATATCTGTAT+AGG | + | chr6.4:47746242-47746261 | MS.gene066974:intron | 30.0% |
| ! | TAAAGGTTGATTGATACATG+CGG | + | chr6.4:47741250-47741269 | MS.gene066974:intron | 30.0% |
| ! | TACATTTTACTAATTTGGGG+TGG | + | chr6.4:47742030-47742049 | MS.gene066974:intron | 30.0% |
| ! | TAGTGTTGAGTATAACCATA+AGG | + | chr6.4:47744285-47744304 | MS.gene066974:CDS | 30.0% |
| ! | TCAAATTATTAATGGTGTCG+GGG | - | chr6.4:47745460-47745479 | None:intergenic | 30.0% |
| ! | TGACATGAAAGCATATTATC+AGG | + | chr6.4:47745237-47745256 | MS.gene066974:CDS | 30.0% |
| ! | TTTAATCGGTTCAAATGTGT+TGG | - | chr6.4:47743276-47743295 | None:intergenic | 30.0% |
| ! | TTTCATTGATGATTTCTCTG+AGG | + | chr6.4:47745910-47745929 | MS.gene066974:CDS | 30.0% |
| !! | ACTGATTTTCCTTCATATGA+TGG | - | chr6.4:47742642-47742661 | None:intergenic | 30.0% |
| !!! | ACTACATGGTATTTTGACAA+TGG | + | chr6.4:47743383-47743402 | MS.gene066974:intron | 30.0% |
| AAAGACATGTTATAAGGGCA+TGG | + | chr6.4:47743866-47743885 | MS.gene066974:intron | 35.0% | |
| AAGATGATAGAGGGTTTCAA+CGG | + | chr6.4:47744254-47744273 | MS.gene066974:CDS | 35.0% | |
| AATCAACCTTCTTGTTCTCA+AGG | - | chr6.4:47745892-47745911 | None:intergenic | 35.0% | |
| AGAAACAACAAGGGAAATTG+TGG | + | chr6.4:47744726-47744745 | MS.gene066974:intron | 35.0% | |
| AGTGGGGACATTAATAAAGT+TGG | - | chr6.4:47742110-47742129 | None:intergenic | 35.0% | |
| AGTTTGGAAGCAATGAAACA+AGG | + | chr6.4:47740778-47740797 | MS.gene066974:CDS | 35.0% | |
| ATAAAATTGGATGCCCGTTT+AGG | - | chr6.4:47741577-47741596 | None:intergenic | 35.0% | |
| ATACCTACATGAAAAAGGGA+AGG | - | chr6.4:47743979-47743998 | None:intergenic | 35.0% | |
| ATCAACCTTCTTGTTCTCAA+GGG | - | chr6.4:47745891-47745910 | None:intergenic | 35.0% | |
| ATTCTTGAGCAGAAACAACA+AGG | + | chr6.4:47744716-47744735 | MS.gene066974:intron | 35.0% | |
| CCAAAGAGGATGAGAAATAA+TGG | - | chr6.4:47742001-47742020 | None:intergenic | 35.0% | |
| CCAACCCATCCAAATATAAT+TGG | - | chr6.4:47741409-47741428 | None:intergenic | 35.0% | |
| CCAATTATATTTGGATGGGT+TGG | + | chr6.4:47741406-47741425 | MS.gene066974:intron | 35.0% | |
| CCATCCAAATATAATTGGCA+TGG | - | chr6.4:47741404-47741423 | None:intergenic | 35.0% | |
| CCATGCCAATTATATTTGGA+TGG | + | chr6.4:47741401-47741420 | MS.gene066974:intron | 35.0% | |
| CCTTCAGAAATATGCAAGTT+TGG | - | chr6.4:47743125-47743144 | None:intergenic | 35.0% | |
| CTACTACGGCATAGAATATA+CGG | + | chr6.4:47743217-47743236 | MS.gene066974:intron | 35.0% | |
| CTTAACAAAAAGTGATGGCA+AGG | - | chr6.4:47743495-47743514 | None:intergenic | 35.0% | |
| GAGAAATCATGTTTATGGAG+AGG | - | chr6.4:47744861-47744880 | None:intergenic | 35.0% | |
| GATATGGTTGTGAACTTTGA+TGG | + | chr6.4:47743842-47743861 | MS.gene066974:intron | 35.0% | |
| GTCATATGAGTGATGGTAAT+GGG | + | chr6.4:47744008-47744027 | MS.gene066974:CDS | 35.0% | |
| GTGGGGACATTAATAAAGTT+GGG | - | chr6.4:47742109-47742128 | None:intergenic | 35.0% | |
| TATCCAACGATCGTTATTGA+TGG | + | chr6.4:47744526-47744545 | MS.gene066974:intron | 35.0% | |
| TATCTGAAAGGATGGTCAAA+TGG | + | chr6.4:47743554-47743573 | MS.gene066974:CDS | 35.0% | |
| TCTTTGTCATGCAGATTTGT+TGG | + | chr6.4:47744209-47744228 | MS.gene066974:intron | 35.0% | |
| TGAAGTGACGATTATGTCAT+CGG | + | chr6.4:47743819-47743838 | MS.gene066974:intron | 35.0% | |
| TGCTGTTGATCAAACCAATT+TGG | + | chr6.4:47745751-47745770 | MS.gene066974:CDS | 35.0% | |
| TGTCATATGAGTGATGGTAA+TGG | + | chr6.4:47744007-47744026 | MS.gene066974:CDS | 35.0% | |
| TGTTCAATGAAGCACAGATA+CGG | + | chr6.4:47745401-47745420 | MS.gene066974:intron | 35.0% | |
| TTCTCTTTGAATCTCCAGAT+TGG | - | chr6.4:47743624-47743643 | None:intergenic | 35.0% | |
| TTCTTGAGCAGAAACAACAA+GGG | + | chr6.4:47744717-47744736 | MS.gene066974:intron | 35.0% | |
| TTGAAGATGTGATCGATATC+AGG | + | chr6.4:47742818-47742837 | MS.gene066974:intron | 35.0% | |
| ! | AAAGGTTGATTGATACATGC+GGG | + | chr6.4:47741251-47741270 | MS.gene066974:intron | 35.0% |
| ! | AAAGTACTAGATGTTGGTTG+TGG | + | chr6.4:47744775-47744794 | MS.gene066974:CDS | 35.0% |
| ! | ACTGACTATTGCAAAAGTGT+TGG | + | chr6.4:47745160-47745179 | MS.gene066974:CDS | 35.0% |
| ! | CATTGAGAGTGCAATAAAGA+AGG | + | chr6.4:47742740-47742759 | MS.gene066974:CDS | 35.0% |
| ! | CCAAACTTGCATATTTCTGA+AGG | + | chr6.4:47743122-47743141 | MS.gene066974:CDS | 35.0% |
| ! | CCATTATTTCTCATCCTCTT+TGG | + | chr6.4:47741998-47742017 | MS.gene066974:intron | 35.0% |
| ! | CTTTTCTTTTGGTCAAGAGA+CGG | - | chr6.4:47742435-47742454 | None:intergenic | 35.0% |
| ! | GGAACCAAGATTTTACACTA+AGG | + | chr6.4:47743666-47743685 | MS.gene066974:CDS | 35.0% |
| ! | GTAATTAAAAGTGTACCTCC+AGG | - | chr6.4:47745142-47745161 | None:intergenic | 35.0% |
| ! | TAGTCAGTGTGAATGTCTTT+TGG | + | chr6.4:47742575-47742594 | MS.gene066974:intron | 35.0% |
| ! | TCGTTATTGATGGTTCACTA+TGG | + | chr6.4:47744536-47744555 | MS.gene066974:intron | 35.0% |
| ! | TTTTAGTAGGCCGATAAAAC+AGG | - | chr6.4:47741600-47741619 | None:intergenic | 35.0% |
| ! | TTTTATAAGTGGTTGAAGCC+TGG | + | chr6.4:47745121-47745140 | MS.gene066974:CDS | 35.0% |
| ! | TTTTTGTCTTGTCCAACAAG+CGG | + | chr6.4:47741737-47741756 | MS.gene066974:intron | 35.0% |
| !! | AAAGAGTGTCATATGAGTGA+TGG | + | chr6.4:47744001-47744020 | MS.gene066974:CDS | 35.0% |
| !! | ACATCTAGTACTTTTTGACC+TGG | - | chr6.4:47744769-47744788 | None:intergenic | 35.0% |
| !! | CTATTTTGAACCAGCCTAAA+CGG | + | chr6.4:47741560-47741579 | MS.gene066974:intron | 35.0% |
| !! | GGCTGAAAATTTTGATGTTG+AGG | + | chr6.4:47744822-47744841 | MS.gene066974:CDS | 35.0% |
| !! | GGTCAAAAAGTACTAGATGT+TGG | + | chr6.4:47744769-47744788 | MS.gene066974:CDS | 35.0% |
| !! | TATCCTTCCCTTTTTCATGT+AGG | + | chr6.4:47743973-47743992 | MS.gene066974:intron | 35.0% |
| !! | TATTTTGAACCAGCCTAAAC+GGG | + | chr6.4:47741561-47741580 | MS.gene066974:intron | 35.0% |
| !! | TCATGCAGATTTGTTGGATA+TGG | + | chr6.4:47744215-47744234 | MS.gene066974:intron | 35.0% |
| !! | TTTAGCTTGATTCGCAAAAG+TGG | + | chr6.4:47744427-47744446 | MS.gene066974:intron | 35.0% |
| !! | TTTGAGACAGCCTTTTCTTT+TGG | - | chr6.4:47742446-47742465 | None:intergenic | 35.0% |
| !!! | ACTGGAATGATTTTTTCAGG+TGG | + | chr6.4:47740973-47740992 | MS.gene066974:intron | 35.0% |
| !!! | CTTGCCATCACTTTTTGTTA+AGG | + | chr6.4:47743493-47743512 | MS.gene066974:intron | 35.0% |
| !!! | GGAAAATCAGTTTTAGAGCT+TGG | + | chr6.4:47742651-47742670 | MS.gene066974:CDS | 35.0% |
| AAATGCCCTTGAGAACAAGA+AGG | + | chr6.4:47745883-47745902 | MS.gene066974:CDS | 40.0% | |
| AAGGCTTATGAAGGGCAATT+TGG | - | chr6.4:47743911-47743930 | None:intergenic | 40.0% | |
| ACGATTATGTCATCGGGATA+TGG | + | chr6.4:47743826-47743845 | MS.gene066974:intron | 40.0% | |
| AGGGAAATTGTGGCAAAGTT+AGG | + | chr6.4:47744736-47744755 | MS.gene066974:CDS | 40.0% | |
| ATGTAGATCTGTCACCAAAG+AGG | - | chr6.4:47742015-47742034 | None:intergenic | 40.0% | |
| CAACACATGACAAACTTTCG+AGG | + | chr6.4:47741703-47741722 | MS.gene066974:intron | 40.0% | |
| CATGTATCTTTCGGATGAAG+AGG | + | chr6.4:47743178-47743197 | MS.gene066974:CDS | 40.0% | |
| CGGCATAGAATATACGGATT+TGG | + | chr6.4:47743223-47743242 | MS.gene066974:intron | 40.0% | |
| CGTCTCTTGACCAAAAGAAA+AGG | + | chr6.4:47742433-47742452 | MS.gene066974:intron | 40.0% | |
| CTTCGTTAGGTTCATGTAGT+GGG | - | chr6.4:47742127-47742146 | None:intergenic | 40.0% | |
| GAACCATCAATAACGATCGT+TGG | - | chr6.4:47744532-47744551 | None:intergenic | 40.0% | |
| GAAGTGACGATTATGTCATC+GGG | + | chr6.4:47743820-47743839 | MS.gene066974:intron | 40.0% | |
| GAGTGTGTGACAAACCAAAT+TGG | - | chr6.4:47745768-47745787 | None:intergenic | 40.0% | |
| GATTCAACGTGCTAACTACA+TGG | + | chr6.4:47743369-47743388 | MS.gene066974:intron | 40.0% | |
| GGGAAATTGTGGCAAAGTTA+GGG | + | chr6.4:47744737-47744756 | MS.gene066974:CDS | 40.0% | |
| GGTGAGCTTCTTATATGCTT+TGG | + | chr6.4:47745931-47745950 | MS.gene066974:intron | 40.0% | |
| GTCATTCTATATGTCGTGTC+CGG | - | chr6.4:47745436-47745455 | None:intergenic | 40.0% | |
| TAGTGCATATTTGAGTCCGA+TGG | - | chr6.4:47744899-47744918 | None:intergenic | 40.0% | |
| TCCTTTGAGCTTTCTCTTGT+GGG | + | chr6.4:47744034-47744053 | MS.gene066974:CDS | 40.0% | |
| TCTCTCTTCTTTGTCGAGAT+GGG | - | chr6.4:47741088-47741107 | None:intergenic | 40.0% | |
| TCTTTGAATCTCCAGATTGG+TGG | - | chr6.4:47743621-47743640 | None:intergenic | 40.0% | |
| TTCGTTAGGTTCATGTAGTG+GGG | - | chr6.4:47742126-47742145 | None:intergenic | 40.0% | |
| TTGTTGAGATGAGCTTCGTT+AGG | - | chr6.4:47742140-47742159 | None:intergenic | 40.0% | |
| ! | CTAGATGTTGGTTGTGGTAT+TGG | + | chr6.4:47744781-47744800 | MS.gene066974:CDS | 40.0% |
| ! | GAATCTTGTTTCCACCAATC+TGG | + | chr6.4:47743607-47743626 | MS.gene066974:CDS | 40.0% |
| AGAGACGGTTATGAGCTTTG+AGG | - | chr6.4:47742420-47742439 | None:intergenic | 45.0% | |
| AGTTTGATCGGCTAAACGGT+AGG | + | chr6.4:47741648-47741667 | MS.gene066974:intron | 45.0% | |
| ATCGGCTAAACGGTAGGTAT+TGG | + | chr6.4:47741654-47741673 | MS.gene066974:intron | 45.0% | |
| CTCCTTTGAGCTTTCTCTTG+TGG | + | chr6.4:47744033-47744052 | MS.gene066974:CDS | 45.0% | |
| CTTGGTTCCCTATAGTGAGT+TGG | - | chr6.4:47743655-47743674 | None:intergenic | 45.0% | |
| CTTGTGGGATGCAAATGCAT+TGG | + | chr6.4:47744049-47744068 | MS.gene066974:CDS | 45.0% | |
| GCTTCGTTAGGTTCATGTAG+TGG | - | chr6.4:47742128-47742147 | None:intergenic | 45.0% | |
| GGTGAGTTTGATCGGCTAAA+CGG | + | chr6.4:47741644-47741663 | MS.gene066974:intron | 45.0% | |
| GTCTCTCTTCTTTGTCGAGA+TGG | - | chr6.4:47741089-47741108 | None:intergenic | 45.0% | |
| GTGAAGTGCAGAGAAGTTAC+TGG | + | chr6.4:47741007-47741026 | MS.gene066974:CDS | 45.0% | |
| TATAAGTGGTTGAAGCCTGG+AGG | + | chr6.4:47745124-47745143 | MS.gene066974:CDS | 45.0% | |
| TCACAGATGCTTGAGAATGC+TGG | + | chr6.4:47745713-47745732 | MS.gene066974:intron | 45.0% | |
| TCCCACAAGAGAAAGCTCAA+AGG | - | chr6.4:47744038-47744057 | None:intergenic | 45.0% | |
| TGTAGCTGGTGAGCAGATAT+GGG | + | chr6.4:47746458-47746477 | MS.gene066974:CDS | 45.0% | |
| TTAGAGCTTGGAGCAGGTAT+TGG | + | chr6.4:47742663-47742682 | MS.gene066974:CDS | 45.0% | |
| ! | ACTGAATTGGCTCAGAAAGC+TGG | + | chr6.4:47742696-47742715 | MS.gene066974:CDS | 45.0% |
| ! | ATCTTTTGTCCACCGCTTGT+TGG | - | chr6.4:47741752-47741771 | None:intergenic | 45.0% |
| ! | CTGAATTGGCTCAGAAAGCT+GGG | + | chr6.4:47742697-47742716 | MS.gene066974:CDS | 45.0% |
| ! | GATGTTGGTTGTGGTATTGG+AGG | + | chr6.4:47744784-47744803 | MS.gene066974:CDS | 45.0% |
| ! | TGGAGGAGGTGACTTTTACA+TGG | + | chr6.4:47744801-47744820 | MS.gene066974:CDS | 45.0% |
| ! | TTGATTCGCAAAAGTGGACG+TGG | + | chr6.4:47744433-47744452 | MS.gene066974:intron | 45.0% |
| !!! | TCAGTTTTAGAGCTTGGAGC+AGG | + | chr6.4:47742657-47742676 | MS.gene066974:CDS | 45.0% |
| AATTAGGCGTGTCCCAGTGT+CGG | - | chr6.4:47745549-47745568 | None:intergenic | 50.0% | |
| AATTGGATGCCCGTTTAGGC+TGG | - | chr6.4:47741573-47741592 | None:intergenic | 50.0% | |
| ACAGATACGGACACAGACAC+CGG | + | chr6.4:47745414-47745433 | MS.gene066974:intron | 50.0% | |
| CAAAAGTGGACGTGGTTCTC+TGG | + | chr6.4:47744441-47744460 | MS.gene066974:intron | 50.0% | |
| CTAGCTATCGAACGTGCCAT+CGG | + | chr6.4:47744880-47744899 | MS.gene066974:CDS | 50.0% | |
| CTCTTCTTTGTCGAGATGGG+AGG | - | chr6.4:47741085-47741104 | None:intergenic | 50.0% | |
| GCAAAGTTAGGGCTAAAGCC+AGG | + | chr6.4:47744748-47744767 | MS.gene066974:CDS | 50.0% | |
| GCACAGACACTCCTCGAATT+AGG | - | chr6.4:47745565-47745584 | None:intergenic | 50.0% | |
| GTAGCTGGTGAGCAGATATG+GGG | + | chr6.4:47746459-47746478 | MS.gene066974:CDS | 50.0% | |
| GTGTAGCTGGTGAGCAGATA+TGG | + | chr6.4:47746457-47746476 | MS.gene066974:CDS | 50.0% | |
| TGGAAGGCTAAGCAGATGAG+AGG | + | chr6.4:47746435-47746454 | MS.gene066974:CDS | 50.0% | |
| TTGTCTTGTCCAACAAGCGG+TGG | + | chr6.4:47741740-47741759 | MS.gene066974:intron | 50.0% | |
| TTTGTGAGCACAGGAGGACT+TGG | + | chr6.4:47744343-47744362 | MS.gene066974:CDS | 50.0% | |
| ! | AAGCAGATGAGAGGTGTAGC+TGG | + | chr6.4:47746444-47746463 | MS.gene066974:CDS | 50.0% |
| ! | GTTGGTTGTGGTATTGGAGG+AGG | + | chr6.4:47744787-47744806 | MS.gene066974:CDS | 50.0% |
| ! | TGTCGGTATCGTGTCGATGT+TGG | + | chr6.4:47745510-47745529 | MS.gene066974:intron | 50.0% |
| ACTGGGACACGCCTAATTCG+AGG | + | chr6.4:47745551-47745570 | MS.gene066974:intron | 55.0% | |
| ! | AGCTGGGCAATTGCTTGCTG+TGG | + | chr6.4:47742713-47742732 | MS.gene066974:CDS | 55.0% |
| ! | CAAGGCTTTGTGAGCACAGG+AGG | + | chr6.4:47744337-47744356 | MS.gene066974:CDS | 55.0% |
| ! | GGTCAAGGCTTTGTGAGCAC+AGG | + | chr6.4:47744334-47744353 | MS.gene066974:CDS | 55.0% |
| ! | TTTGTCGAGATGGGAGGCGT+TGG | - | chr6.4:47741079-47741098 | None:intergenic | 55.0% |
| ACACGACACGTGTCCGACAC+TGG | + | chr6.4:47745533-47745552 | MS.gene066974:intron | 60.0% | |
| CACGACACGTGTCCGACACT+GGG | + | chr6.4:47745534-47745553 | MS.gene066974:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47740772 | 47746506 | 47740772 | ID=MS.gene066974 |
| chr6.4 | mRNA | 47740772 | 47746506 | 47740772 | ID=MS.gene066974.t1;Parent=MS.gene066974 |
| chr6.4 | exon | 47740772 | 47740799 | 47740772 | ID=MS.gene066974.t1.exon1;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47740772 | 47740799 | 47740772 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47740992 | 47741113 | 47740992 | ID=MS.gene066974.t1.exon2;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47740992 | 47741113 | 47740992 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47742624 | 47742761 | 47742624 | ID=MS.gene066974.t1.exon3;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47742624 | 47742761 | 47742624 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47743062 | 47743199 | 47743062 | ID=MS.gene066974.t1.exon4;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47743062 | 47743199 | 47743062 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47743544 | 47743687 | 47743544 | ID=MS.gene066974.t1.exon5;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47743544 | 47743687 | 47743544 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47743995 | 47744105 | 47743995 | ID=MS.gene066974.t1.exon6;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47743995 | 47744105 | 47743995 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47744223 | 47744364 | 47744223 | ID=MS.gene066974.t1.exon7;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47744223 | 47744364 | 47744223 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47744728 | 47745008 | 47744728 | ID=MS.gene066974.t1.exon8;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47744728 | 47745008 | 47744728 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47745097 | 47745258 | 47745097 | ID=MS.gene066974.t1.exon9;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47745097 | 47745258 | 47745097 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47745719 | 47745772 | 47745719 | ID=MS.gene066974.t1.exon10;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47745719 | 47745772 | 47745719 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47745857 | 47745931 | 47745857 | ID=MS.gene066974.t1.exon11;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47745857 | 47745931 | 47745857 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| chr6.4 | exon | 47746408 | 47746506 | 47746408 | ID=MS.gene066974.t1.exon12;Parent=MS.gene066974.t1 |
| chr6.4 | CDS | 47746408 | 47746506 | 47746408 | ID=cds.MS.gene066974.t1;Parent=MS.gene066974.t1 |
| Gene Sequence |
| Protein sequence |
