Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048425.t1 | AET03315.1 | 98.3 | 348 | 6 | 0 | 1 | 348 | 9 | 356 | 2.00E-193 | 684.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048425.t1 | Q38827 | 63.6 | 343 | 116 | 4 | 8 | 348 | 3 | 338 | 1.3e-113 | 411.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048425.t1 | B7FIH2 | 98.3 | 348 | 6 | 0 | 1 | 348 | 1 | 348 | 1.4e-193 | 684.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene048425.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048425 | MS.gene015771 | PPI |
| MS.gene048425 | MS.gene061505 | PPI |
| MS.gene048425 | MS.gene04738 | PPI |
| MS.gene048425 | MS.gene68989 | PPI |
| MS.gene048425 | MS.gene05894 | PPI |
| MS.gene048425 | MS.gene049100 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048425.t1 | MTR_8g067530 | 98.276 | 348 | 6 | 0 | 1 | 348 | 9 | 356 | 0.0 | 701 |
| MS.gene048425.t1 | MTR_5g030710 | 72.702 | 359 | 63 | 7 | 1 | 348 | 1 | 335 | 0.0 | 511 |
| MS.gene048425.t1 | MTR_5g067350 | 56.742 | 356 | 132 | 9 | 3 | 348 | 4 | 347 | 6.21e-125 | 362 |
| MS.gene048425.t1 | MTR_2g101500 | 49.704 | 338 | 125 | 10 | 39 | 348 | 6 | 326 | 2.97e-98 | 294 |
| MS.gene048425.t1 | MTR_6g488150 | 55.172 | 290 | 88 | 7 | 59 | 348 | 7 | 254 | 5.71e-98 | 290 |
| MS.gene048425.t1 | MTR_8g103030 | 50.804 | 311 | 106 | 9 | 56 | 348 | 12 | 293 | 4.14e-92 | 277 |
| MS.gene048425.t1 | MTR_5g067350 | 57.202 | 243 | 92 | 8 | 38 | 270 | 32 | 272 | 8.86e-73 | 227 |
| MS.gene048425.t1 | MTR_1g080860 | 45.548 | 292 | 96 | 8 | 67 | 348 | 15 | 253 | 9.84e-69 | 216 |
| MS.gene048425.t1 | MTR_7g096090 | 61.818 | 165 | 61 | 1 | 184 | 348 | 88 | 250 | 3.31e-68 | 214 |
| MS.gene048425.t1 | MTR_1g093240 | 64.596 | 161 | 53 | 2 | 190 | 348 | 78 | 236 | 8.52e-68 | 213 |
| MS.gene048425.t1 | MTR_1g070520 | 62.500 | 168 | 56 | 3 | 186 | 348 | 80 | 245 | 5.19e-66 | 209 |
| MS.gene048425.t1 | MTR_1g080860 | 44.128 | 281 | 94 | 8 | 67 | 337 | 15 | 242 | 3.60e-62 | 199 |
| MS.gene048425.t1 | MTR_1g093240 | 62.667 | 150 | 52 | 2 | 190 | 337 | 78 | 225 | 4.07e-60 | 193 |
| MS.gene048425.t1 | MTR_1g070830 | 40.000 | 280 | 87 | 10 | 58 | 337 | 4 | 202 | 7.85e-49 | 163 |
| MS.gene048425.t1 | MTR_6g488150 | 47.170 | 212 | 70 | 7 | 59 | 270 | 7 | 176 | 2.58e-48 | 161 |
| MS.gene048425.t1 | MTR_1g093240 | 61.240 | 129 | 46 | 2 | 190 | 316 | 78 | 204 | 1.30e-47 | 160 |
| MS.gene048425.t1 | MTR_1g040675 | 38.745 | 271 | 78 | 7 | 67 | 337 | 1 | 183 | 5.66e-46 | 155 |
| MS.gene048425.t1 | MTR_1g076270 | 46.591 | 176 | 65 | 5 | 164 | 336 | 29 | 178 | 1.28e-44 | 151 |
| MS.gene048425.t1 | MTR_1g093350 | 46.591 | 176 | 65 | 5 | 164 | 336 | 29 | 178 | 1.28e-44 | 151 |
| MS.gene048425.t1 | MTR_1g069495 | 41.304 | 184 | 75 | 4 | 194 | 344 | 81 | 264 | 2.46e-35 | 130 |
| MS.gene048425.t1 | MTR_1g040675 | 36.000 | 250 | 72 | 7 | 67 | 316 | 1 | 162 | 1.96e-34 | 124 |
| MS.gene048425.t1 | MTR_8g014520 | 38.579 | 197 | 99 | 5 | 155 | 332 | 67 | 260 | 3.22e-34 | 127 |
| MS.gene048425.t1 | MTR_8g014520 | 38.579 | 197 | 99 | 5 | 155 | 332 | 67 | 260 | 3.42e-34 | 127 |
| MS.gene048425.t1 | MTR_4g011880 | 49.333 | 150 | 45 | 5 | 193 | 340 | 52 | 172 | 1.46e-33 | 122 |
| MS.gene048425.t1 | MTR_2g100780 | 39.086 | 197 | 95 | 6 | 167 | 339 | 68 | 263 | 1.26e-29 | 115 |
| MS.gene048425.t1 | MTR_2g100780 | 39.267 | 191 | 87 | 6 | 167 | 332 | 68 | 254 | 1.89e-29 | 114 |
| MS.gene048425.t1 | MTR_2g102490 | 46.341 | 123 | 54 | 3 | 212 | 331 | 70 | 183 | 7.63e-29 | 110 |
| MS.gene048425.t1 | MTR_4g124300 | 33.987 | 153 | 72 | 5 | 182 | 331 | 56 | 182 | 1.11e-18 | 83.2 |
| MS.gene048425.t1 | MTR_3g106850 | 28.481 | 158 | 79 | 4 | 185 | 333 | 78 | 210 | 2.48e-16 | 77.4 |
| MS.gene048425.t1 | MTR_1g085750 | 38.182 | 110 | 53 | 2 | 227 | 336 | 82 | 176 | 3.71e-16 | 75.9 |
| MS.gene048425.t1 | MTR_7g110790 | 38.679 | 106 | 43 | 3 | 228 | 329 | 68 | 155 | 5.79e-15 | 72.0 |
| MS.gene048425.t1 | MTR_1g109510 | 30.769 | 143 | 78 | 4 | 188 | 329 | 46 | 168 | 5.85e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048425.t1 | AT5G65670 | 65.396 | 341 | 111 | 3 | 8 | 348 | 3 | 336 | 2.81e-151 | 429 |
| MS.gene048425.t1 | AT5G65670 | 65.015 | 343 | 111 | 4 | 8 | 348 | 3 | 338 | 1.82e-149 | 424 |
| MS.gene048425.t1 | AT2G22670 | 65.421 | 321 | 88 | 7 | 33 | 347 | 15 | 318 | 1.42e-139 | 399 |
| MS.gene048425.t1 | AT2G22670 | 65.421 | 321 | 88 | 7 | 33 | 347 | 15 | 318 | 1.42e-139 | 399 |
| MS.gene048425.t1 | AT2G22670 | 65.421 | 321 | 88 | 7 | 33 | 347 | 32 | 335 | 1.64e-139 | 399 |
| MS.gene048425.t1 | AT2G22670 | 64.798 | 321 | 88 | 8 | 33 | 347 | 15 | 316 | 1.62e-136 | 391 |
| MS.gene048425.t1 | AT2G22670 | 64.798 | 321 | 88 | 8 | 33 | 347 | 15 | 316 | 1.62e-136 | 391 |
| MS.gene048425.t1 | AT4G29080 | 48.328 | 329 | 120 | 8 | 39 | 348 | 8 | 305 | 2.36e-90 | 273 |
| MS.gene048425.t1 | AT4G14550 | 45.263 | 285 | 96 | 7 | 67 | 348 | 1 | 228 | 6.59e-70 | 218 |
| MS.gene048425.t1 | AT1G04250 | 44.876 | 283 | 95 | 8 | 67 | 348 | 7 | 229 | 4.89e-68 | 213 |
| MS.gene048425.t1 | AT3G04730 | 42.761 | 297 | 93 | 7 | 67 | 348 | 2 | 236 | 1.75e-66 | 209 |
| MS.gene048425.t1 | AT3G23050 | 42.662 | 293 | 102 | 9 | 67 | 348 | 6 | 243 | 4.56e-64 | 204 |
| MS.gene048425.t1 | AT4G14550 | 43.382 | 272 | 98 | 7 | 67 | 337 | 1 | 217 | 1.22e-62 | 200 |
| MS.gene048425.t1 | AT4G14550 | 41.270 | 252 | 88 | 7 | 67 | 315 | 1 | 195 | 9.99e-50 | 165 |
| MS.gene048425.t1 | AT1G04240 | 52.667 | 150 | 51 | 4 | 188 | 337 | 57 | 186 | 1.85e-45 | 154 |
| MS.gene048425.t1 | AT3G23050 | 38.846 | 260 | 94 | 8 | 67 | 316 | 6 | 210 | 2.37e-45 | 154 |
| MS.gene048425.t1 | AT1G04240 | 52.667 | 150 | 51 | 4 | 188 | 337 | 157 | 286 | 1.18e-44 | 155 |
| MS.gene048425.t1 | AT5G43700 | 50.318 | 157 | 54 | 5 | 181 | 337 | 50 | 182 | 3.46e-42 | 145 |
| MS.gene048425.t1 | AT3G23030 | 48.993 | 149 | 45 | 2 | 188 | 336 | 53 | 170 | 4.40e-40 | 139 |
| MS.gene048425.t1 | AT3G23030 | 48.993 | 149 | 45 | 2 | 188 | 336 | 140 | 257 | 1.85e-39 | 140 |
| MS.gene048425.t1 | AT3G15540 | 45.977 | 174 | 67 | 6 | 173 | 343 | 48 | 197 | 7.83e-37 | 132 |
| MS.gene048425.t1 | AT1G04550 | 43.575 | 179 | 70 | 5 | 187 | 343 | 61 | 230 | 3.26e-36 | 131 |
| MS.gene048425.t1 | AT1G52830 | 44.667 | 150 | 56 | 4 | 188 | 337 | 63 | 185 | 6.07e-36 | 129 |
| MS.gene048425.t1 | AT2G33310 | 44.022 | 184 | 69 | 6 | 183 | 342 | 63 | 236 | 1.07e-35 | 130 |
| MS.gene048425.t1 | AT2G33310 | 44.022 | 184 | 69 | 6 | 183 | 342 | 63 | 236 | 1.07e-35 | 130 |
| MS.gene048425.t1 | AT2G33310 | 40.976 | 205 | 83 | 7 | 162 | 342 | 47 | 237 | 7.65e-35 | 128 |
| MS.gene048425.t1 | AT1G15580 | 46.853 | 143 | 44 | 3 | 190 | 331 | 48 | 159 | 9.99e-35 | 125 |
| MS.gene048425.t1 | AT4G28640 | 42.353 | 170 | 70 | 4 | 188 | 337 | 81 | 242 | 3.27e-33 | 124 |
| MS.gene048425.t1 | AT4G14560 | 48.611 | 144 | 45 | 3 | 190 | 333 | 50 | 164 | 3.83e-33 | 121 |
| MS.gene048425.t1 | AT4G28640 | 42.262 | 168 | 69 | 4 | 188 | 335 | 81 | 240 | 6.60e-33 | 123 |
| MS.gene048425.t1 | AT4G28640 | 42.262 | 168 | 69 | 4 | 188 | 335 | 81 | 240 | 6.83e-32 | 122 |
| MS.gene048425.t1 | AT4G14550 | 37.255 | 204 | 74 | 6 | 67 | 269 | 1 | 151 | 1.47e-28 | 109 |
| MS.gene048425.t1 | AT3G16500 | 38.690 | 168 | 83 | 4 | 181 | 332 | 89 | 252 | 2.88e-28 | 111 |
| MS.gene048425.t1 | AT3G16500 | 38.690 | 168 | 83 | 4 | 181 | 332 | 89 | 252 | 3.16e-28 | 111 |
| MS.gene048425.t1 | AT1G04100 | 37.500 | 168 | 76 | 4 | 197 | 337 | 95 | 260 | 1.04e-27 | 109 |
| MS.gene048425.t1 | AT5G25890 | 38.356 | 146 | 68 | 2 | 194 | 339 | 47 | 170 | 2.67e-26 | 103 |
| MS.gene048425.t1 | AT1G51950 | 39.241 | 158 | 71 | 4 | 196 | 332 | 97 | 250 | 3.91e-25 | 102 |
| MS.gene048425.t1 | AT3G23050 | 34.742 | 213 | 76 | 7 | 67 | 269 | 6 | 165 | 1.24e-24 | 99.0 |
| MS.gene048425.t1 | AT3G17600 | 38.931 | 131 | 56 | 4 | 199 | 329 | 48 | 154 | 1.55e-22 | 92.8 |
| MS.gene048425.t1 | AT3G62100 | 39.423 | 104 | 48 | 2 | 226 | 329 | 80 | 168 | 7.61e-18 | 80.5 |
| MS.gene048425.t1 | AT2G46990 | 38.235 | 102 | 48 | 1 | 226 | 327 | 82 | 168 | 2.50e-17 | 79.0 |
| MS.gene048425.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 230 | 334 | 62 | 150 | 7.92e-14 | 68.9 |
| MS.gene048425.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 230 | 334 | 94 | 182 | 1.78e-13 | 68.6 |
| MS.gene048425.t1 | AT3G62100 | 38.462 | 91 | 41 | 2 | 226 | 316 | 80 | 155 | 8.01e-13 | 65.9 |
| MS.gene048425.t1 | AT2G46990 | 35.165 | 91 | 44 | 1 | 226 | 316 | 82 | 157 | 5.79e-12 | 63.5 |
| MS.gene048425.t1 | AT4G32280 | 30.693 | 101 | 50 | 2 | 229 | 329 | 118 | 198 | 1.79e-11 | 63.2 |
| MS.gene048425.t1 | AT2G01200 | 32.000 | 125 | 66 | 2 | 210 | 334 | 83 | 188 | 2.66e-11 | 62.4 |
| MS.gene048425.t1 | AT2G01200 | 32.000 | 125 | 66 | 2 | 210 | 334 | 83 | 188 | 2.66e-11 | 62.4 |
Find 89 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTGTCGCCTTCAAATTT+AGG | 0.166961 | 8.3:-35705991 | None:intergenic |
| CAAGGTCAGACGACAGTTTC+TGG | 0.185586 | 8.3:-35707056 | None:intergenic |
| CTCTCTTGTACCACCTTCTT+TGG | 0.201829 | 8.3:-35706487 | None:intergenic |
| TTGCTCTGCCCTTCCTCTTC+AGG | 0.229134 | 8.3:-35705815 | None:intergenic |
| TCCCAGAAGACTGTTGTTTC+AGG | 0.240495 | 8.3:+35706142 | MS.gene048425:CDS |
| TGCCTGAAACAACAGTCTTC+TGG | 0.283080 | 8.3:-35706144 | None:intergenic |
| CTGCTTTCGCCAAGACCTTC+TGG | 0.286943 | 8.3:+35706436 | MS.gene048425:CDS |
| GAGTTAAGGCTCGGACTTCC+TGG | 0.311938 | 8.3:+35706010 | MS.gene048425:CDS |
| AAAAGATCAAGATCCCTTTC+AGG | 0.324520 | 8.3:-35706043 | None:intergenic |
| GCCTGAAACAACAGTCTTCT+GGG | 0.362984 | 8.3:-35706143 | None:intergenic |
| GGCCTCCTATTAGATCATTT+AGG | 0.366841 | 8.3:+35706896 | MS.gene048425:CDS |
| TGGATGGCGCTCCTTATCTT+AGG | 0.388317 | 8.3:+35707004 | MS.gene048425:CDS |
| CCAGTTCCATTTGCTGTACA+AGG | 0.388892 | 8.3:-35706511 | None:intergenic |
| CCTTTGCTTCCTAGTAAAGA+TGG | 0.391162 | 8.3:+35706106 | MS.gene048425:CDS |
| AGCTGGTGCACTGCCACTGA+TGG | 0.394017 | 8.3:-35706539 | None:intergenic |
| TTCTTCTCTTTGCAGCTCCA+AGG | 0.402863 | 8.3:+35708894 | MS.gene048425:intron |
| CTTTCAGGCGACTGAGATCC+AGG | 0.408190 | 8.3:-35706028 | None:intergenic |
| TGTGGTTCGCATGGAGCTCC+AGG | 0.419336 | 8.3:+35707244 | MS.gene048425:CDS |
| GGCATTTCTTTAACTGTAGT+AGG | 0.421367 | 8.3:-35706466 | None:intergenic |
| GCGATGCAGGCAAAATATAC+TGG | 0.428432 | 8.3:+35706394 | MS.gene048425:intron |
| CGGTTTGTCTGATTGCTCAT+CGG | 0.435647 | 8.3:+35705922 | MS.gene048425:CDS |
| ATCTATCTAGCTCCTGCTCT+TGG | 0.438286 | 8.3:-35708930 | None:intergenic |
| TACGACAGAGCACAAGTTGT+TGG | 0.447586 | 8.3:+35706871 | MS.gene048425:intron |
| ATTTGAAGGCGACAGAGTTA+AGG | 0.448866 | 8.3:+35705996 | MS.gene048425:CDS |
| GGTTCTGATGCAATTGGCTT+AGG | 0.454909 | 8.3:+35708064 | MS.gene048425:CDS |
| GAGAGCCCTTGTACAGCAAA+TGG | 0.456009 | 8.3:+35706505 | MS.gene048425:CDS |
| ATGAAGGGTTCTGATGCAAT+TGG | 0.459012 | 8.3:+35708058 | MS.gene048425:CDS |
| TCTTCTCTTTGCAGCTCCAA+GGG | 0.460018 | 8.3:+35708895 | MS.gene048425:intron |
| AAAAGAGAACCTAAATTTGA+AGG | 0.461528 | 8.3:+35705982 | MS.gene048425:CDS |
| GAGCAGATTCCATCTTTACT+AGG | 0.464937 | 8.3:-35706115 | None:intergenic |
| CTTTGCAGCTCCAAGGGCCA+TGG | 0.469634 | 8.3:+35708901 | MS.gene048425:intron |
| ATCTGCATCTCCACAATCCT+TGG | 0.473964 | 8.3:+35705853 | MS.gene048425:CDS |
| GCTGGTGCACTGCCACTGAT+GGG | 0.475390 | 8.3:-35706538 | None:intergenic |
| GTTGAGTGAGAGCAAATTGA+AGG | 0.479532 | 8.3:+35707276 | MS.gene048425:CDS |
| TCACTCAACATTTCTCTCCC+TGG | 0.480300 | 8.3:-35707262 | None:intergenic |
| TTCGTCATTGTTCTTTGAAG+TGG | 0.480383 | 8.3:-35706935 | None:intergenic |
| GATGGTGACTGGATGCTTGT+AGG | 0.487607 | 8.3:+35707343 | MS.gene048425:CDS |
| CTGGATCTCAGTCGCCTGAA+AGG | 0.489384 | 8.3:+35706029 | MS.gene048425:CDS |
| TGGATCTCAGTCGCCTGAAA+GGG | 0.490957 | 8.3:+35706030 | MS.gene048425:CDS |
| GTCATTGTTCTTTGAAGTGG+TGG | 0.492137 | 8.3:-35706932 | None:intergenic |
| CCTTGTACAGCAAATGGAAC+TGG | 0.501475 | 8.3:+35706511 | MS.gene048425:CDS |
| TTTGTGAAGGTTAGCATGGA+TGG | 0.502534 | 8.3:+35706988 | MS.gene048425:CDS |
| CATCTTTACTAGGAAGCAAA+GGG | 0.502801 | 8.3:-35706105 | None:intergenic |
| GATGCAGATGCTACCGTTGA+GGG | 0.502971 | 8.3:-35705839 | None:intergenic |
| TCCTCTTCAGGAAGCAGCAG+TGG | 0.503885 | 8.3:-35705803 | None:intergenic |
| TTCCTAAATGATCTAATAGG+AGG | 0.509027 | 8.3:-35706898 | None:intergenic |
| GCCACTGCTGCTTCCTGAAG+AGG | 0.511534 | 8.3:+35705802 | MS.gene048425:CDS |
| AGATCAACCTTCCTAAGATA+AGG | 0.512174 | 8.3:-35707015 | None:intergenic |
| TGTTCTACTTACTTGGCAGC+TGG | 0.519150 | 8.3:-35706556 | None:intergenic |
| CAAAAGACTGAAAATCATGA+AGG | 0.520025 | 8.3:+35708042 | MS.gene048425:CDS |
| TTGAAAGAACGCAATTATCT+CGG | 0.521949 | 8.3:+35705902 | MS.gene048425:CDS |
| GTTGTTTCAGGCAACAAAAG+AGG | 0.523282 | 8.3:+35706154 | MS.gene048425:CDS |
| GGTTGAGCTCCAGAAGGTCT+TGG | 0.524873 | 8.3:-35706445 | None:intergenic |
| ACAAATAGTGCAGCTGCACC+AGG | 0.530129 | 8.3:-35706970 | None:intergenic |
| CCATCTTTACTAGGAAGCAA+AGG | 0.532897 | 8.3:-35706106 | None:intergenic |
| CCTGCATGGTTCTGAATATG+TGG | 0.554207 | 8.3:+35707303 | MS.gene048425:CDS |
| AGTTAAAGAAATGCCAAAGA+AGG | 0.560187 | 8.3:+35706474 | MS.gene048425:CDS |
| TGGCGCTCCTTATCTTAGGA+AGG | 0.560715 | 8.3:+35707008 | MS.gene048425:CDS |
| AAGAACAATGACGAAGTGGA+TGG | 0.561142 | 8.3:+35706943 | MS.gene048425:CDS |
| TCAGGTCAATGTGGTTCGCA+TGG | 0.563755 | 8.3:+35707235 | MS.gene048425:intron |
| ACAGAGCACAAGTTGTTGGT+TGG | 0.565232 | 8.3:+35706875 | MS.gene048425:intron |
| CTGCTGCTTCCTGAAGAGGA+AGG | 0.570185 | 8.3:+35705806 | MS.gene048425:CDS |
| CAGTTCCATTTGCTGTACAA+GGG | 0.574593 | 8.3:-35706510 | None:intergenic |
| GACGAAGTGGATGGAAAACC+TGG | 0.579600 | 8.3:+35706952 | MS.gene048425:CDS |
| TGCTGCTTCCTGAAGAGGAA+GGG | 0.582052 | 8.3:+35705807 | MS.gene048425:CDS |
| AACAGCTGAACATCTTCTCA+AGG | 0.587195 | 8.3:-35707074 | None:intergenic |
| ATGAAGATAAAGATGGTGAC+TGG | 0.592828 | 8.3:+35707332 | MS.gene048425:CDS |
| AAGGCGACAGAGTTAAGGCT+CGG | 0.594838 | 8.3:+35706001 | MS.gene048425:CDS |
| CCACATATTCAGAACCATGC+AGG | 0.602515 | 8.3:-35707303 | None:intergenic |
| TAAAGAAATGCCAAAGAAGG+TGG | 0.603403 | 8.3:+35706477 | MS.gene048425:CDS |
| TTCAAAGAACAATGACGAAG+TGG | 0.604897 | 8.3:+35706939 | MS.gene048425:CDS |
| TGCAGCTGCACTATTTGTGA+AGG | 0.608355 | 8.3:+35706975 | MS.gene048425:CDS |
| AAAAGACTGAAAATCATGAA+GGG | 0.608483 | 8.3:+35708043 | MS.gene048425:CDS |
| TCTTCAGGAAGCAGCAGTGG+CGG | 0.617802 | 8.3:-35705800 | None:intergenic |
| AGGAAACACTTCCAGTGTGT+CGG | 0.619955 | 8.3:-35706182 | None:intergenic |
| AAATTGAAGGACTTCCTGCA+TGG | 0.622375 | 8.3:+35707289 | MS.gene048425:CDS |
| GTCACTTATGAAGATAAAGA+TGG | 0.623567 | 8.3:+35707325 | MS.gene048425:CDS |
| CTAGGAAGCAAAGGGAAGAG+CGG | 0.624666 | 8.3:-35706097 | None:intergenic |
| AGATGCAGATGCTACCGTTG+AGG | 0.626765 | 8.3:-35705840 | None:intergenic |
| GTAGTAGGTTGAGCTCCAGA+AGG | 0.631684 | 8.3:-35706451 | None:intergenic |
| GCTTGTAGGAGATGTACCAT+GGG | 0.634513 | 8.3:+35707357 | MS.gene048425:CDS |
| AGGGCAGAGCAACCCCTCAA+CGG | 0.635822 | 8.3:+35705826 | MS.gene048425:CDS |
| ACTATTTGTGAAGGTTAGCA+TGG | 0.640434 | 8.3:+35706984 | MS.gene048425:CDS |
| GGAACTGGAGCTCCCATCAG+TGG | 0.641227 | 8.3:+35706526 | MS.gene048425:CDS |
| GTGGTTCGCATGGAGCTCCA+GGG | 0.655439 | 8.3:+35707245 | MS.gene048425:CDS |
| ATGCAGATGCTACCGTTGAG+GGG | 0.667822 | 8.3:-35705838 | None:intergenic |
| TGCTTGTAGGAGATGTACCA+TGG | 0.683935 | 8.3:+35707356 | MS.gene048425:CDS |
| CACACTGGAAGTGTTTCCTG+AGG | 0.707617 | 8.3:+35706186 | MS.gene048425:CDS |
| TGTACCTCATCAGGTCAATG+TGG | 0.718709 | 8.3:+35707226 | MS.gene048425:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAGTAACAAATTTAAA+AGG | - | chr8.3:35707693-35707712 | None:intergenic | 10.0% |
| !! | GTAAAATATATAGAAATAAT+CGG | + | chr8.3:35706612-35706631 | MS.gene048425:intron | 10.0% |
| !!! | TATTATTTTGATATAGTTTA+GGG | + | chr8.3:35706741-35706760 | MS.gene048425:intron | 10.0% |
| !!! | TTATTATTTTGATATAGTTT+AGG | + | chr8.3:35706740-35706759 | MS.gene048425:intron | 10.0% |
| !!! | TTTAAATTTGTTACTTAAAT+AGG | + | chr8.3:35707693-35707712 | MS.gene048425:intron | 10.0% |
| !!! | TTTTTTTATTCAAAATTGAT+AGG | - | chr8.3:35706327-35706346 | None:intergenic | 10.0% |
| !! | AATATATTAACTCTAGTAAA+AGG | - | chr8.3:35706230-35706249 | None:intergenic | 15.0% |
| !! | ATATATTAACACATTTCAAT+AGG | - | chr8.3:35707849-35707868 | None:intergenic | 15.0% |
| !! | TGAATAAAAAAAAGATCAAA+TGG | + | chr8.3:35706335-35706354 | MS.gene048425:intron | 15.0% |
| !!! | TACTAGAGTTAATATATTTT+TGG | + | chr8.3:35706232-35706251 | MS.gene048425:intron | 15.0% |
| !! | AAATAACACTTATAATGAGA+TGG | - | chr8.3:35708399-35708418 | None:intergenic | 20.0% |
| !! | AAATAGGAACATAAAAGTTT+AGG | + | chr8.3:35707709-35707728 | MS.gene048425:intron | 20.0% |
| !! | ACTTAAACATTAAACATATC+AGG | - | chr8.3:35708103-35708122 | None:intergenic | 20.0% |
| !! | ATAAAAGTTTAGGTATGTTA+TGG | + | chr8.3:35707719-35707738 | MS.gene048425:intron | 20.0% |
| !! | CAAAAAAAAAAGATACTACA+TGG | - | chr8.3:35707615-35707634 | None:intergenic | 20.0% |
| !! | TGTATATTAAATGGTAATTG+AGG | + | chr8.3:35707544-35707563 | MS.gene048425:intron | 20.0% |
| !!! | AAATTTCATACATGTTTTGA+AGG | + | chr8.3:35708214-35708233 | MS.gene048425:intron | 20.0% |
| !!! | CATGTAGTATCTTTTTTTTT+TGG | + | chr8.3:35707613-35707632 | MS.gene048425:intron | 20.0% |
| !!! | CTAATTAATATGGGTTTTTT+AGG | - | chr8.3:35708491-35708510 | None:intergenic | 20.0% |
| !!! | CTCATTATAAGTGTTATTTT+AGG | + | chr8.3:35708400-35708419 | MS.gene048425:intron | 20.0% |
| !!! | TAATTTAATAAGGGTATTGT+TGG | + | chr8.3:35708560-35708579 | MS.gene048425:intron | 20.0% |
| !!! | TGGGCTATTTAATTTAATAA+GGG | + | chr8.3:35708551-35708570 | MS.gene048425:intron | 20.0% |
| !!! | TTACTTATGTCTTTTCAATT+AGG | - | chr8.3:35707655-35707674 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAAATGATCTAAT+AGG | - | chr8.3:35706904-35706923 | None:intergenic | 20.0% |
| ! | AAAACCCATATTAATTAGAG+TGG | + | chr8.3:35708493-35708512 | MS.gene048425:intron | 25.0% |
| ! | AAAAGACTGAAAATCATGAA+GGG | + | chr8.3:35708043-35708062 | MS.gene048425:CDS | 25.0% |
| ! | AAAAGAGAACCTAAATTTGA+AGG | + | chr8.3:35705982-35706001 | MS.gene048425:CDS | 25.0% |
| ! | AAGTAGAACATTCTACATTA+AGG | + | chr8.3:35706569-35706588 | MS.gene048425:intron | 25.0% |
| ! | AATTTCCTTAAGTTACATAC+AGG | - | chr8.3:35708755-35708774 | None:intergenic | 25.0% |
| ! | ATATAGTTTAGGGACTAAAT+AGG | + | chr8.3:35706751-35706770 | MS.gene048425:intron | 25.0% |
| ! | ATTTGCAATTCATTCTTGTA+AGG | - | chr8.3:35707584-35707603 | None:intergenic | 25.0% |
| ! | GAAATTGAAAGTAGTAGTAA+AGG | + | chr8.3:35708518-35708537 | MS.gene048425:intron | 25.0% |
| ! | GTTTACTCAATACCTTAAAA+GGG | + | chr8.3:35706807-35706826 | MS.gene048425:intron | 25.0% |
| ! | TACCACAAGAAAACTATTAT+TGG | + | chr8.3:35708846-35708865 | MS.gene048425:intron | 25.0% |
| ! | TCAACCACTCTAATTAATAT+GGG | - | chr8.3:35708500-35708519 | None:intergenic | 25.0% |
| ! | TCATTCTTGTAAGGAATTTA+TGG | - | chr8.3:35707575-35707594 | None:intergenic | 25.0% |
| ! | TTCAACCACTCTAATTAATA+TGG | - | chr8.3:35708501-35708520 | None:intergenic | 25.0% |
| ! | TTCAATTAGGAAGGTTATTT+GGG | - | chr8.3:35707642-35707661 | None:intergenic | 25.0% |
| ! | TTTCAATTAGGAAGGTTATT+TGG | - | chr8.3:35707643-35707662 | None:intergenic | 25.0% |
| ! | TTTGAATATAATGATGCAGT+TGG | + | chr8.3:35708712-35708731 | MS.gene048425:intron | 25.0% |
| !! | ACATCAAAAAATCCCTTTTA+AGG | - | chr8.3:35706822-35706841 | None:intergenic | 25.0% |
| !! | GTGGGCTATTTAATTTAATA+AGG | + | chr8.3:35708550-35708569 | MS.gene048425:intron | 25.0% |
| !! | TAAGTTTATGTTGTTTACAC+AGG | + | chr8.3:35708169-35708188 | MS.gene048425:intron | 25.0% |
| !! | TACCAATAATAGTTTTCTTG+TGG | - | chr8.3:35708851-35708870 | None:intergenic | 25.0% |
| !! | TTATGTCTTTTCAATTAGGA+AGG | - | chr8.3:35707651-35707670 | None:intergenic | 25.0% |
| !!! | AAAGTTTAACTTTTTACCTC+AGG | - | chr8.3:35706205-35706224 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTCTTCGTTTG+TGG | - | chr8.3:35708691-35708710 | None:intergenic | 25.0% |
| AACACTTATAATGAGATGGA+TGG | - | chr8.3:35708395-35708414 | None:intergenic | 30.0% | |
| AATATATAAACTGTCCCCAA+AGG | - | chr8.3:35707525-35707544 | None:intergenic | 30.0% | |
| ACTCACAAAACACAACAATT+TGG | - | chr8.3:35708261-35708280 | None:intergenic | 30.0% | |
| ACTGAAATGTATCTTTGTTG+TGG | + | chr8.3:35707189-35707208 | MS.gene048425:intron | 30.0% | |
| AGTTAAAGAAATGCCAAAGA+AGG | + | chr8.3:35706474-35706493 | MS.gene048425:CDS | 30.0% | |
| ATATATAAACTGTCCCCAAA+GGG | - | chr8.3:35707524-35707543 | None:intergenic | 30.0% | |
| ATATATTGACAAGAGCTACT+AGG | + | chr8.3:35706649-35706668 | MS.gene048425:intron | 30.0% | |
| ATCATTTAGGAAAAACTCAC+TGG | + | chr8.3:35706909-35706928 | MS.gene048425:CDS | 30.0% | |
| CAAAAGACTGAAAATCATGA+AGG | + | chr8.3:35708042-35708061 | MS.gene048425:CDS | 30.0% | |
| GACACTTATAATGAGATAGA+GGG | + | chr8.3:35708643-35708662 | MS.gene048425:intron | 30.0% | |
| GATTTAAAAACTTACTCCCA+TGG | - | chr8.3:35707376-35707395 | None:intergenic | 30.0% | |
| GGTTTACTCAATACCTTAAA+AGG | + | chr8.3:35706806-35706825 | MS.gene048425:intron | 30.0% | |
| GTCACTTATGAAGATAAAGA+TGG | + | chr8.3:35707325-35707344 | MS.gene048425:CDS | 30.0% | |
| GTTTACACAGGCATAATATA+TGG | + | chr8.3:35708181-35708200 | MS.gene048425:intron | 30.0% | |
| TATATTGACAAGAGCTACTA+GGG | + | chr8.3:35706650-35706669 | MS.gene048425:intron | 30.0% | |
| TCAATTAGGAAGGTTATTTG+GGG | - | chr8.3:35707641-35707660 | None:intergenic | 30.0% | |
| TGAAACCTGTATGTAACTTA+AGG | + | chr8.3:35708747-35708766 | MS.gene048425:intron | 30.0% | |
| TGACACTTATAATGAGATAG+AGG | + | chr8.3:35708642-35708661 | MS.gene048425:intron | 30.0% | |
| TGTAGAATGTTCTACTTACT+TGG | - | chr8.3:35706566-35706585 | None:intergenic | 30.0% | |
| TTCCTAAATGATCTAATAGG+AGG | - | chr8.3:35706901-35706920 | None:intergenic | 30.0% | |
| TTGAAAGAACGCAATTATCT+CGG | + | chr8.3:35705902-35705921 | MS.gene048425:CDS | 30.0% | |
| ! | AATAGTTTTCTTGTGGTACA+AGG | - | chr8.3:35708844-35708863 | None:intergenic | 30.0% |
| ! | AGACGGATTTCATATAGTTT+AGG | + | chr8.3:35706680-35706699 | MS.gene048425:intron | 30.0% |
| ! | GACGGATTTCATATAGTTTA+GGG | + | chr8.3:35706681-35706700 | MS.gene048425:intron | 30.0% |
| ! | TTAGGTATGTTATGGTCTTA+TGG | + | chr8.3:35707727-35707746 | MS.gene048425:intron | 30.0% |
| !! | TGTTTTTGACAAAGTGTTCA+AGG | - | chr8.3:35707490-35707509 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTGTTGAGTTCAA+TGG | - | chr8.3:35706070-35706089 | None:intergenic | 30.0% |
| AAAAGATCAAGATCCCTTTC+AGG | - | chr8.3:35706046-35706065 | None:intergenic | 35.0% | |
| AAGTTGTAACAGATCACCTA+AGG | - | chr8.3:35707103-35707122 | None:intergenic | 35.0% | |
| ACAACCAATGAATCATCTCT+TGG | + | chr8.3:35708586-35708605 | MS.gene048425:intron | 35.0% | |
| ACGAGTGTTTAAGAGACTAT+AGG | + | chr8.3:35708290-35708309 | MS.gene048425:intron | 35.0% | |
| ACTATTTGTGAAGGTTAGCA+TGG | + | chr8.3:35706984-35707003 | MS.gene048425:CDS | 35.0% | |
| AGATCAACCTTCCTAAGATA+AGG | - | chr8.3:35707018-35707037 | None:intergenic | 35.0% | |
| ATATCCATGTTTGTACACCT+AGG | + | chr8.3:35707865-35707884 | MS.gene048425:intron | 35.0% | |
| ATGAAGATAAAGATGGTGAC+TGG | + | chr8.3:35707332-35707351 | MS.gene048425:CDS | 35.0% | |
| CAATTAGGAAGGTTATTTGG+GGG | - | chr8.3:35707640-35707659 | None:intergenic | 35.0% | |
| CATCTTTACTAGGAAGCAAA+GGG | - | chr8.3:35706108-35706127 | None:intergenic | 35.0% | |
| GGCATTTCTTTAACTGTAGT+AGG | - | chr8.3:35706469-35706488 | None:intergenic | 35.0% | |
| GTAGTAGTAAAGGAATAGCT+AGG | + | chr8.3:35708528-35708547 | MS.gene048425:intron | 35.0% | |
| TAAAGAAATGCCAAAGAAGG+TGG | + | chr8.3:35706477-35706496 | MS.gene048425:CDS | 35.0% | |
| TAAGTTAGACCATTGAGTCT+GGG | + | chr8.3:35708118-35708137 | MS.gene048425:intron | 35.0% | |
| TACACCAAGAGATGATTCAT+TGG | - | chr8.3:35708593-35708612 | None:intergenic | 35.0% | |
| TAGGGATTGTTGGAACTATA+GGG | + | chr8.3:35706292-35706311 | MS.gene048425:intron | 35.0% | |
| TAGTAAAGGAATAGCTAGGT+GGG | + | chr8.3:35708532-35708551 | MS.gene048425:intron | 35.0% | |
| TTAAGTTAGACCATTGAGTC+TGG | + | chr8.3:35708117-35708136 | MS.gene048425:intron | 35.0% | |
| TTACATGTGCGATAACATCA+TGG | - | chr8.3:35707454-35707473 | None:intergenic | 35.0% | |
| TTCAAAGAACAATGACGAAG+TGG | + | chr8.3:35706939-35706958 | MS.gene048425:CDS | 35.0% | |
| TTCTTAACAATATGCGATGC+AGG | + | chr8.3:35706381-35706400 | MS.gene048425:intron | 35.0% | |
| TTCTTCAACGACTAAAGTGA+TGG | + | chr8.3:35706785-35706804 | MS.gene048425:intron | 35.0% | |
| ! | CAGACATAGGAACTTGATTT+TGG | + | chr8.3:35707774-35707793 | MS.gene048425:intron | 35.0% |
| ! | TGTGGATTAAGTTCAAGACT+AGG | - | chr8.3:35708673-35708692 | None:intergenic | 35.0% |
| ! | TTCGTCATTGTTCTTTGAAG+TGG | - | chr8.3:35706938-35706957 | None:intergenic | 35.0% |
| ! | TTTTCTCATCAGACAAGCTT+GGG | - | chr8.3:35705964-35705983 | None:intergenic | 35.0% |
| ! | TTTTTCTCATCAGACAAGCT+TGG | - | chr8.3:35705965-35705984 | None:intergenic | 35.0% |
| !! | ATGTTCAGCTGTTTTACCTT+AGG | + | chr8.3:35707084-35707103 | MS.gene048425:CDS | 35.0% |
| !! | ATTATGATTGAAAGTGCCTC+TGG | + | chr8.3:35708772-35708791 | MS.gene048425:intron | 35.0% |
| !! | TGCAAATGATTTTAGTGCCT+AGG | + | chr8.3:35706260-35706279 | MS.gene048425:intron | 35.0% |
| AAATTGAAGGACTTCCTGCA+TGG | + | chr8.3:35707289-35707308 | MS.gene048425:CDS | 40.0% | |
| AACAGCTGAACATCTTCTCA+AGG | - | chr8.3:35707077-35707096 | None:intergenic | 40.0% | |
| AAGAACAATGACGAAGTGGA+TGG | + | chr8.3:35706943-35706962 | MS.gene048425:CDS | 40.0% | |
| AATCCCTAGGTTAACATCCT+AGG | - | chr8.3:35706280-35706299 | None:intergenic | 40.0% | |
| ACATATCAACCCAGACTCAA+TGG | - | chr8.3:35708130-35708149 | None:intergenic | 40.0% | |
| ACTCTGTCGCCTTCAAATTT+AGG | - | chr8.3:35705994-35706013 | None:intergenic | 40.0% | |
| ACTGTCAACTTGAAGACTGA+TGG | + | chr8.3:35707926-35707945 | MS.gene048425:intron | 40.0% | |
| AGTTTGAGAAAAACGGTCCA+AGG | - | chr8.3:35705873-35705892 | None:intergenic | 40.0% | |
| ATTTGAAGGCGACAGAGTTA+AGG | + | chr8.3:35705996-35706015 | MS.gene048425:CDS | 40.0% | |
| ATTTGCAACACTTAACGCCT+AGG | - | chr8.3:35707885-35707904 | None:intergenic | 40.0% | |
| CAGCTGCAGTTTGAGAAAAA+CGG | - | chr8.3:35705880-35705899 | None:intergenic | 40.0% | |
| CCATCTTTACTAGGAAGCAA+AGG | - | chr8.3:35706109-35706128 | None:intergenic | 40.0% | |
| CCTTTGCTTCCTAGTAAAGA+TGG | + | chr8.3:35706106-35706125 | MS.gene048425:CDS | 40.0% | |
| CTAGGGATTGTTGGAACTAT+AGG | + | chr8.3:35706291-35706310 | MS.gene048425:intron | 40.0% | |
| CTATAGTTCCAACAATCCCT+AGG | - | chr8.3:35706293-35706312 | None:intergenic | 40.0% | |
| GACAGGTGTCAGATAGTTTA+AGG | + | chr8.3:35706712-35706731 | MS.gene048425:intron | 40.0% | |
| GAGCAGATTCCATCTTTACT+AGG | - | chr8.3:35706118-35706137 | None:intergenic | 40.0% | |
| GATGTTAACCTAGGGATTGT+TGG | + | chr8.3:35706282-35706301 | MS.gene048425:intron | 40.0% | |
| GGCCTCCTATTAGATCATTT+AGG | + | chr8.3:35706896-35706915 | MS.gene048425:CDS | 40.0% | |
| GTAGTAAAGGAATAGCTAGG+TGG | + | chr8.3:35708531-35708550 | MS.gene048425:intron | 40.0% | |
| GTTGAGTGAGAGCAAATTGA+AGG | + | chr8.3:35707276-35707295 | MS.gene048425:CDS | 40.0% | |
| TCATTGCAGATGTAAACCAG+AGG | - | chr8.3:35708791-35708810 | None:intergenic | 40.0% | |
| TTTGTGAAGGTTAGCATGGA+TGG | + | chr8.3:35706988-35707007 | MS.gene048425:CDS | 40.0% | |
| ! | AGTTTAGGGACTAAGTTGAC+AGG | + | chr8.3:35706695-35706714 | MS.gene048425:intron | 40.0% |
| ! | ATGAAGGGTTCTGATGCAAT+TGG | + | chr8.3:35708058-35708077 | MS.gene048425:CDS | 40.0% |
| ! | GTTGTTTCAGGCAACAAAAG+AGG | + | chr8.3:35706154-35706173 | MS.gene048425:CDS | 40.0% |
| ! | GTTTTTCTCAAACTGCAGCT+GGG | + | chr8.3:35705879-35705898 | MS.gene048425:CDS | 40.0% |
| ! | TAGATGAAGAGTGCAGACAT+AGG | + | chr8.3:35707761-35707780 | MS.gene048425:intron | 40.0% |
| !! | CAGTTCCATTTGCTGTACAA+GGG | - | chr8.3:35706513-35706532 | None:intergenic | 40.0% |
| !! | GTCATTGTTCTTTGAAGTGG+TGG | - | chr8.3:35706935-35706954 | None:intergenic | 40.0% |
| AACATGCTTGTGCAACCCTT+TGG | + | chr8.3:35707506-35707525 | MS.gene048425:intron | 45.0% | |
| AACGCCTAGGTGTACAAACA+TGG | - | chr8.3:35707872-35707891 | None:intergenic | 45.0% | |
| ACAGAGCACAAGTTGTTGGT+TGG | + | chr8.3:35706875-35706894 | MS.gene048425:intron | 45.0% | |
| ACATGCTTGTGCAACCCTTT+GGG | + | chr8.3:35707507-35707526 | MS.gene048425:intron | 45.0% | |
| AGGAAACACTTCCAGTGTGT+CGG | - | chr8.3:35706185-35706204 | None:intergenic | 45.0% | |
| AGTGCCTAGGATGTTAACCT+AGG | + | chr8.3:35706273-35706292 | MS.gene048425:intron | 45.0% | |
| ATCTGCATCTCCACAATCCT+TGG | + | chr8.3:35705853-35705872 | MS.gene048425:CDS | 45.0% | |
| CCACATATTCAGAACCATGC+AGG | - | chr8.3:35707306-35707325 | None:intergenic | 45.0% | |
| CCATGGAAAAATCCAAGAGC+AGG | + | chr8.3:35708918-35708937 | MS.gene048425:CDS | 45.0% | |
| CCTTGTACAGCAAATGGAAC+TGG | + | chr8.3:35706511-35706530 | MS.gene048425:CDS | 45.0% | |
| CGGTTTGTCTGATTGCTCAT+CGG | + | chr8.3:35705922-35705941 | MS.gene048425:CDS | 45.0% | |
| CTCTCTTGTACCACCTTCTT+TGG | - | chr8.3:35706490-35706509 | None:intergenic | 45.0% | |
| GAAAAACGGTCCAAGGATTG+TGG | - | chr8.3:35705866-35705885 | None:intergenic | 45.0% | |
| GCCTGAAACAACAGTCTTCT+GGG | - | chr8.3:35706146-35706165 | None:intergenic | 45.0% | |
| GCGATGCAGGCAAAATATAC+TGG | + | chr8.3:35706394-35706413 | MS.gene048425:intron | 45.0% | |
| GCTACTAGGGAGTAAAGAGA+CGG | + | chr8.3:35706663-35706682 | MS.gene048425:intron | 45.0% | |
| GCTTGTAGGAGATGTACCAT+GGG | + | chr8.3:35707357-35707376 | MS.gene048425:CDS | 45.0% | |
| GTGCCTAGGATGTTAACCTA+GGG | + | chr8.3:35706274-35706293 | MS.gene048425:intron | 45.0% | |
| TACACTCGATGTACCTCATC+AGG | + | chr8.3:35707217-35707236 | MS.gene048425:intron | 45.0% | |
| TACGACAGAGCACAAGTTGT+TGG | + | chr8.3:35706871-35706890 | MS.gene048425:intron | 45.0% | |
| TCACTCAACATTTCTCTCCC+TGG | - | chr8.3:35707265-35707284 | None:intergenic | 45.0% | |
| TCTTCTCTTTGCAGCTCCAA+GGG | + | chr8.3:35708895-35708914 | MS.gene048425:intron | 45.0% | |
| TGCAGCTGCACTATTTGTGA+AGG | + | chr8.3:35706975-35706994 | MS.gene048425:CDS | 45.0% | |
| TGCCTGAAACAACAGTCTTC+TGG | - | chr8.3:35706147-35706166 | None:intergenic | 45.0% | |
| TGCTTGTAGGAGATGTACCA+TGG | + | chr8.3:35707356-35707375 | MS.gene048425:CDS | 45.0% | |
| TGTACCTCATCAGGTCAATG+TGG | + | chr8.3:35707226-35707245 | MS.gene048425:intron | 45.0% | |
| TGTTCTACTTACTTGGCAGC+TGG | - | chr8.3:35706559-35706578 | None:intergenic | 45.0% | |
| TTCTTCTCTTTGCAGCTCCA+AGG | + | chr8.3:35708894-35708913 | MS.gene048425:intron | 45.0% | |
| ! | CCTGCTCTTGGATTTTTCCA+TGG | - | chr8.3:35708921-35708940 | None:intergenic | 45.0% |
| ! | CGTTTTTCTCAAACTGCAGC+TGG | + | chr8.3:35705878-35705897 | MS.gene048425:CDS | 45.0% |
| ! | GGTTCTGATGCAATTGGCTT+AGG | + | chr8.3:35708064-35708083 | MS.gene048425:CDS | 45.0% |
| ! | TTGGATTTTTCCATGGCCCT+TGG | - | chr8.3:35708914-35708933 | None:intergenic | 45.0% |
| !! | CCAGTTCCATTTGCTGTACA+AGG | - | chr8.3:35706514-35706533 | None:intergenic | 45.0% |
| !! | CCTGCATGGTTCTGAATATG+TGG | + | chr8.3:35707303-35707322 | MS.gene048425:CDS | 45.0% |
| !! | TCCCAGAAGACTGTTGTTTC+AGG | + | chr8.3:35706142-35706161 | MS.gene048425:CDS | 45.0% |
| !! | TTTATATATTGTATATTAAA+TGG | + | chr8.3:35707535-35707554 | MS.gene048425:intron | 5.0% |
| AAGGCGACAGAGTTAAGGCT+CGG | + | chr8.3:35706001-35706020 | MS.gene048425:CDS | 50.0% | |
| ACAAATAGTGCAGCTGCACC+AGG | - | chr8.3:35706973-35706992 | None:intergenic | 50.0% | |
| AGATGCAGATGCTACCGTTG+AGG | - | chr8.3:35705843-35705862 | None:intergenic | 50.0% | |
| ATGCAGATGCTACCGTTGAG+GGG | - | chr8.3:35705841-35705860 | None:intergenic | 50.0% | |
| CAAGGTCAGACGACAGTTTC+TGG | - | chr8.3:35707059-35707078 | None:intergenic | 50.0% | |
| CATGCTTGTGCAACCCTTTG+GGG | + | chr8.3:35707508-35707527 | MS.gene048425:intron | 50.0% | |
| CGAACCACATTGACCTGATG+AGG | - | chr8.3:35707233-35707252 | None:intergenic | 50.0% | |
| CTAGGAAGCAAAGGGAAGAG+CGG | - | chr8.3:35706100-35706119 | None:intergenic | 50.0% | |
| GACGAAGTGGATGGAAAACC+TGG | + | chr8.3:35706952-35706971 | MS.gene048425:CDS | 50.0% | |
| GAGAGCCCTTGTACAGCAAA+TGG | + | chr8.3:35706505-35706524 | MS.gene048425:CDS | 50.0% | |
| GATGCAGATGCTACCGTTGA+GGG | - | chr8.3:35705842-35705861 | None:intergenic | 50.0% | |
| GATGGTGACTGGATGCTTGT+AGG | + | chr8.3:35707343-35707362 | MS.gene048425:CDS | 50.0% | |
| TCAGGTCAATGTGGTTCGCA+TGG | + | chr8.3:35707235-35707254 | MS.gene048425:intron | 50.0% | |
| TGGATCTCAGTCGCCTGAAA+GGG | + | chr8.3:35706030-35706049 | MS.gene048425:CDS | 50.0% | |
| TGGATGGCGCTCCTTATCTT+AGG | + | chr8.3:35707004-35707023 | MS.gene048425:CDS | 50.0% | |
| TGGCGCTCCTTATCTTAGGA+AGG | + | chr8.3:35707008-35707027 | MS.gene048425:CDS | 50.0% | |
| ! | AAGAGGTTTTGCCGACACAC+TGG | + | chr8.3:35706171-35706190 | MS.gene048425:CDS | 50.0% |
| ! | GTAGTAGGTTGAGCTCCAGA+AGG | - | chr8.3:35706454-35706473 | None:intergenic | 50.0% |
| ! | TGCTGCTTCCTGAAGAGGAA+GGG | + | chr8.3:35705807-35705826 | MS.gene048425:CDS | 50.0% |
| !! | CACACTGGAAGTGTTTCCTG+AGG | + | chr8.3:35706186-35706205 | MS.gene048425:CDS | 50.0% |
| CTGCTTTCGCCAAGACCTTC+TGG | + | chr8.3:35706436-35706455 | MS.gene048425:CDS | 55.0% | |
| CTGGATCTCAGTCGCCTGAA+AGG | + | chr8.3:35706029-35706048 | MS.gene048425:CDS | 55.0% | |
| CTTTCAGGCGACTGAGATCC+AGG | - | chr8.3:35706031-35706050 | None:intergenic | 55.0% | |
| GAGTTAAGGCTCGGACTTCC+TGG | + | chr8.3:35706010-35706029 | MS.gene048425:CDS | 55.0% | |
| GGTTGAGCTCCAGAAGGTCT+TGG | - | chr8.3:35706448-35706467 | None:intergenic | 55.0% | |
| TCCTCTTCAGGAAGCAGCAG+TGG | - | chr8.3:35705806-35705825 | None:intergenic | 55.0% | |
| TCTTCAGGAAGCAGCAGTGG+CGG | - | chr8.3:35705803-35705822 | None:intergenic | 55.0% | |
| TTGCTCTGCCCTTCCTCTTC+AGG | - | chr8.3:35705818-35705837 | None:intergenic | 55.0% | |
| ! | CTGCTGCTTCCTGAAGAGGA+AGG | + | chr8.3:35705806-35705825 | MS.gene048425:CDS | 55.0% |
| AGCTGGTGCACTGCCACTGA+TGG | - | chr8.3:35706542-35706561 | None:intergenic | 60.0% | |
| AGGGCAGAGCAACCCCTCAA+CGG | + | chr8.3:35705826-35705845 | MS.gene048425:CDS | 60.0% | |
| CTTTGCAGCTCCAAGGGCCA+TGG | + | chr8.3:35708901-35708920 | MS.gene048425:intron | 60.0% | |
| GCTGGTGCACTGCCACTGAT+GGG | - | chr8.3:35706541-35706560 | None:intergenic | 60.0% | |
| GGAACTGGAGCTCCCATCAG+TGG | + | chr8.3:35706526-35706545 | MS.gene048425:CDS | 60.0% | |
| GTGGTTCGCATGGAGCTCCA+GGG | + | chr8.3:35707245-35707264 | MS.gene048425:CDS | 60.0% | |
| TGTGGTTCGCATGGAGCTCC+AGG | + | chr8.3:35707244-35707263 | MS.gene048425:CDS | 60.0% | |
| ! | GCCACTGCTGCTTCCTGAAG+AGG | + | chr8.3:35705802-35705821 | MS.gene048425:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 35705794 | 35708946 | 35705794 | ID=MS.gene048425 |
| chr8.3 | mRNA | 35705794 | 35708946 | 35705794 | ID=MS.gene048425.t1;Parent=MS.gene048425 |
| chr8.3 | exon | 35705794 | 35706207 | 35705794 | ID=MS.gene048425.t1.exon1;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35705794 | 35706207 | 35705794 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| chr8.3 | exon | 35706403 | 35706566 | 35706403 | ID=MS.gene048425.t1.exon2;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35706403 | 35706566 | 35706403 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| chr8.3 | exon | 35706879 | 35707105 | 35706879 | ID=MS.gene048425.t1.exon3;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35706879 | 35707105 | 35706879 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| chr8.3 | exon | 35707239 | 35707380 | 35707239 | ID=MS.gene048425.t1.exon4;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35707239 | 35707380 | 35707239 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| chr8.3 | exon | 35708024 | 35708085 | 35708024 | ID=MS.gene048425.t1.exon5;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35708024 | 35708085 | 35708024 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| chr8.3 | exon | 35708909 | 35708946 | 35708909 | ID=MS.gene048425.t1.exon6;Parent=MS.gene048425.t1 |
| chr8.3 | CDS | 35708909 | 35708946 | 35708909 | ID=cds.MS.gene048425.t1;Parent=MS.gene048425.t1 |
| Gene Sequence |
| Protein sequence |
