AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048935

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048935.t1 MTR_8g099550 99.508 610 3 0 1 610 1 610 0.0 1248
MS.gene048935.t1 MTR_5g009150 89.853 611 61 1 1 610 1 611 0.0 1152
MS.gene048935.t1 MTR_8g027675 83.553 608 99 1 1 608 1 607 0.0 1077
MS.gene048935.t1 MTR_4g098920 67.541 610 193 2 1 609 1 606 0.0 897
MS.gene048935.t1 MTR_8g105580 66.505 618 191 4 1 608 4 615 0.0 890
MS.gene048935.t1 MTR_7g451010 67.974 612 192 2 1 608 4 615 0.0 887
MS.gene048935.t1 MTR_8g009510 66.139 632 190 2 1 608 4 635 0.0 887
MS.gene048935.t1 MTR_1g032550 67.047 613 195 2 1 608 4 614 0.0 887
MS.gene048935.t1 MTR_8g105580 67.474 578 172 4 1 568 4 575 0.0 840
MS.gene048935.t1 MTR_8g009510 65.465 527 161 1 103 608 2 528 0.0 734
MS.gene048935.t1 MTR_2g009690 39.596 495 278 6 4 489 24 506 6.61e-106 338
MS.gene048935.t1 MTR_4g093750 38.742 493 281 5 4 487 15 495 9.74e-101 322
MS.gene048935.t1 MTR_4g093750 38.259 494 286 4 4 488 15 498 4.56e-100 321
MS.gene048935.t1 MTR_4g030140 29.808 520 318 12 1 495 4 501 1.48e-58 211
MS.gene048935.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.86e-58 208
MS.gene048935.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 1.24e-57 208
MS.gene048935.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.47e-57 207
MS.gene048935.t1 MTR_4g134680 33.333 201 134 0 295 495 1 201 1.12e-32 133
MS.gene048935.t1 MTR_8g087770 42.632 190 99 3 34 219 68 251 4.84e-32 132
MS.gene048935.t1 MTR_8g087750 33.546 313 190 8 34 340 71 371 8.30e-31 128
MS.gene048935.t1 MTR_8g463270 26.331 338 217 6 9 326 31 356 1.25e-18 90.5
MS.gene048935.t1 MTR_4g094300 27.723 202 135 5 21 214 28 226 1.43e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048935.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene048935.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene048935.t1 AT5G42080 85.902 610 80 1 1 610 1 604 0.0 1107
MS.gene048935.t1 AT3G61760 82.651 611 104 2 1 610 1 610 0.0 1071
MS.gene048935.t1 AT3G61760 83.831 569 90 2 1 568 1 568 0.0 1010
MS.gene048935.t1 AT3G60190 67.690 619 189 2 1 608 4 622 0.0 910
MS.gene048935.t1 AT1G14830 68.791 612 185 3 1 608 4 613 0.0 907
MS.gene048935.t1 AT2G44590 63.948 613 217 3 1 610 1 612 0.0 852
MS.gene048935.t1 AT2G44590 61.375 611 215 4 1 608 1 593 0.0 808
MS.gene048935.t1 AT2G44590 61.275 612 215 5 1 608 1 594 0.0 804
MS.gene048935.t1 AT5G42080 88.345 429 50 0 1 429 1 429 0.0 804
MS.gene048935.t1 AT3G61760 84.270 445 68 2 1 444 1 444 0.0 795
MS.gene048935.t1 AT2G14120 36.273 499 293 7 3 487 20 507 1.35e-93 304
MS.gene048935.t1 AT2G14120 36.128 501 295 7 3 489 20 509 4.15e-93 303
MS.gene048935.t1 AT2G14120 36.273 499 293 7 3 487 20 507 4.51e-93 303
MS.gene048935.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.23e-92 303
MS.gene048935.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.36e-92 303
MS.gene048935.t1 AT2G14120 34.659 528 291 9 3 487 20 536 9.88e-89 293
MS.gene048935.t1 AT1G59610 30.561 517 315 14 1 495 4 498 1.22e-61 220
MS.gene048935.t1 AT1G10290 30.250 519 314 13 1 495 4 498 8.56e-61 218
MS.gene048935.t1 AT1G60500 29.810 473 284 14 34 483 65 512 2.37e-39 154
MS.gene048935.t1 AT1G60530 46.524 187 96 3 34 219 62 245 3.09e-39 146
MS.gene048935.t1 AT1G53140 31.651 218 120 5 9 214 47 247 1.77e-18 90.1

Find 150 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTTCATTCGCTATTAA+AGG 0.155423 4.2:-4338143 MS.gene048935:intron
AGGAAAAGATTCACCGATTT+TGG 0.158213 4.2:-4343375 MS.gene048935:intron
GCAGCCGAACTGTATAATTT+TGG 0.190369 4.2:-4341017 MS.gene048935:intron
GAATGAGGATCCTGCAATTA+TGG 0.256115 4.2:-4336039 MS.gene048935:CDS
AAGCCTGTTGCAGCTGATGC+TGG 0.280429 4.2:-4339126 MS.gene048935:CDS
TGAAACCGAACTGGCTCGTT+TGG 0.280984 4.2:-4339151 MS.gene048935:CDS
CTGGTTTACGGGCTGAGGTT+GGG 0.283613 4.2:-4336850 MS.gene048935:CDS
GTCGTTGGTGGCCAGAGTTC+TGG 0.296472 4.2:-4343613 MS.gene048935:CDS
TTAGCTAGGTGTTTATATTC+AGG 0.300523 4.2:+4339397 None:intergenic
CTAAGGCGGTGCAAGCTCTT+TGG 0.312942 4.2:+4343695 None:intergenic
TTTGACGAAGATTGATCTAA+TGG 0.319005 4.2:-4340651 MS.gene048935:CDS
ATCTGACGGTTGATTTCTTT+CGG 0.331884 4.2:-4336745 MS.gene048935:CDS
TGAAGCAATACCCTGGTTTA+CGG 0.336223 4.2:-4336862 MS.gene048935:CDS
CAGAATGGGGTCTGAGCATC+TGG 0.343447 4.2:-4339374 MS.gene048935:CDS
TAGTGCACTCCCTACTCTTT+GGG 0.348707 4.2:-4343656 MS.gene048935:CDS
CTAGTGCACTCCCTACTCTT+TGG 0.351916 4.2:-4343657 MS.gene048935:CDS
GATATAATGATTCTTATCTA+AGG 0.354606 4.2:-4336667 MS.gene048935:CDS
AGGGACAGTTGAAATTTGTT+TGG 0.356007 4.2:+4343029 None:intergenic
GAATATATGCTAAGATGAAT+AGG 0.359659 4.2:+4343009 None:intergenic
TGTGCATGACATTGAGAATA+TGG 0.365705 4.2:-4341895 MS.gene048935:CDS
GCATCAACAGCTGCCTCGGC+AGG 0.374032 4.2:+4338484 None:intergenic
AGCTTTCAATGGAAAATATA+AGG 0.374495 4.2:-4338606 MS.gene048935:CDS
AGACTGAATGCCTGGAATCT+TGG 0.385851 4.2:+4339200 None:intergenic
TTGACACTCATCGATCTTCC+TGG 0.386900 4.2:-4342070 MS.gene048935:CDS
TGGTTTACGGGCTGAGGTTG+GGG 0.387468 4.2:-4336849 MS.gene048935:CDS
GAAGCAATACCCTGGTTTAC+GGG 0.387693 4.2:-4336861 MS.gene048935:CDS
CCTGGTTTACGGGCTGAGGT+TGG 0.394247 4.2:-4336851 MS.gene048935:CDS
AACTGCATCTATTTCAGCTT+GGG 0.397169 4.2:+4335971 None:intergenic
AAAAGAAAAGTTACCAAAAT+CGG 0.399826 4.2:+4343362 None:intergenic
AATCCACTCTAGTTACAATC+AGG 0.400990 4.2:-4338510 MS.gene048935:CDS
GTTTGACAAGCAGCTTTCAA+TGG 0.401921 4.2:-4338617 MS.gene048935:CDS
CAAAGAGCTTGCACCGCCTT+AGG 0.402102 4.2:-4343694 MS.gene048935:CDS
AACATTACAACTGGTCGATA+TGG 0.402322 4.2:-4336777 MS.gene048935:CDS
GAAACCGAACTGGCTCGTTT+GGG 0.407691 4.2:-4339150 MS.gene048935:CDS
CTAATTAGAGACTGAATGCC+TGG 0.416975 4.2:+4339192 None:intergenic
GATTTCTTACCTCGTGGATC+AGG 0.421686 4.2:-4343556 MS.gene048935:intron
AAACACCTAGCTAACAGAAT+GGG 0.429971 4.2:-4339388 MS.gene048935:CDS
CTTTCCCAAACGAGCCAGTT+CGG 0.441013 4.2:+4339146 None:intergenic
ACCCCAGCATCAGCTGCAAC+AGG 0.443010 4.2:+4339123 None:intergenic
ATATTCAAAGACCATCTTGA+TGG 0.447318 4.2:-4338809 MS.gene048935:CDS
CCATTGTTTATTGTCAAGTA+CGG 0.448290 4.2:-4336291 MS.gene048935:CDS
CAAAGCTGTTAGTGAGACTC+TGG 0.449716 4.2:-4338110 MS.gene048935:intron
GAATGAGAGATGAAAGCAAA+AGG 0.450845 4.2:-4336802 MS.gene048935:CDS
CACTAACAGCTTTGTGAACC+AGG 0.457295 4.2:+4338119 None:intergenic
CCTGCTATCGCCGTCGTTGG+TGG 0.458671 4.2:-4343625 MS.gene048935:CDS
TTCTGGAAAATCCTCCGTAT+TGG 0.463410 4.2:-4343596 MS.gene048935:CDS
AGCCTGTTGCAGCTGATGCT+GGG 0.466361 4.2:-4339125 MS.gene048935:CDS
CCAACCTCAGCCCGTAAACC+AGG 0.468070 4.2:+4336851 None:intergenic
CAGACCCCATTCTGTTAGCT+AGG 0.470784 4.2:+4339383 None:intergenic
TCCGTATTGGAGAGTGTTGT+CGG 0.471538 4.2:-4343583 MS.gene048935:CDS
AATATATGCTAAGATGAATA+GGG 0.472521 4.2:+4343010 None:intergenic
AGCTCCCTGCTGCTCTGAAA+AGG 0.472526 4.2:-4338645 MS.gene048935:CDS
CATATAGGTTAAAGTTCCCT+TGG 0.473662 4.2:-4339513 MS.gene048935:CDS
AAATGAAATTGAAACCGAAC+TGG 0.477658 4.2:-4339160 MS.gene048935:CDS
GAAGGAAATTCAAGATGAAA+CGG 0.484800 4.2:-4343070 MS.gene048935:CDS
CTGAAATAGATGCAGTTGCT+TGG 0.485487 4.2:-4335965 MS.gene048935:CDS
CAAAAGGGCAACATTACAAC+TGG 0.486257 4.2:-4336786 MS.gene048935:CDS
CAACTGGTCGATATGGAGTC+TGG 0.487914 4.2:-4336770 MS.gene048935:CDS
TGAAATTTGTTTGGATCGAC+CGG 0.492583 4.2:+4343038 None:intergenic
TTGCTTGCTCAGATGTTGGA+AGG 0.493499 4.2:-4339541 MS.gene048935:intron
AGACGACGGTATCCTTGCTC+TGG 0.498380 4.2:+4338538 None:intergenic
CTACGACGTTCCATAATTGC+AGG 0.498628 4.2:+4336029 None:intergenic
GTAATCAAGTCCAAGATTCC+AGG 0.501222 4.2:-4339210 MS.gene048935:CDS
CAACTGCATCTATTTCAGCT+TGG 0.501627 4.2:+4335970 None:intergenic
TTTGTCCTCATTACTGAATG+AGG 0.502603 4.2:-4336054 MS.gene048935:CDS
TATTTGTAGGGATCGTTACT+CGG 0.504045 4.2:-4343470 MS.gene048935:intron
ATAGCCAAAATTATACAGTT+CGG 0.504975 4.2:+4341013 None:intergenic
ATACCCTGGTTTACGGGCTG+AGG 0.506554 4.2:-4336855 MS.gene048935:CDS
CCACCAACGACGGCGATAGC+AGG 0.509781 4.2:+4343625 None:intergenic
CATTGTTTATTGTCAAGTAC+GGG 0.511383 4.2:-4336290 MS.gene048935:CDS
TACCGGTAGGATCCACTTCA+CGG 0.512959 4.2:+4340942 None:intergenic
TGTTGGAAGGGAGAGCATAT+AGG 0.515104 4.2:-4339528 MS.gene048935:CDS
CTGAGTTTCTTCACCTTCCG+AGG 0.516849 4.2:-4343395 MS.gene048935:CDS
GATTCTTATCTAAGGCGAAT+CGG 0.517945 4.2:-4336659 MS.gene048935:intron
GATGAAACGGATAGAGAAAC+CGG 0.518246 4.2:-4343057 MS.gene048935:CDS
TGCTTGCTCAGATGTTGGAA+GGG 0.521748 4.2:-4339540 MS.gene048935:intron
CCACCCTTGTCCACATCTTG+AGG 0.522131 4.2:+4336716 None:intergenic
AATTAAAATTTCCCGTGAAG+TGG 0.523008 4.2:-4340954 MS.gene048935:CDS
TAAACACCTAGCTAACAGAA+TGG 0.524545 4.2:-4339389 MS.gene048935:CDS
GGGCAAGTTATATGCAATCA+TGG 0.524553 4.2:-4338855 MS.gene048935:CDS
TAGTGGCCTTGCAAAGAGAC+TGG 0.526892 4.2:-4336009 MS.gene048935:CDS
TCAATTTCCTACAGGCGACC+TGG 0.527613 4.2:-4338700 MS.gene048935:intron
ATGTCATGCACAATACTCTC+AGG 0.527874 4.2:+4341906 None:intergenic
GGAAGAGAATCCCAAAGAGT+AGG 0.528008 4.2:+4343646 None:intergenic
AGATTCACCGTGGTCACCTA+AGG 0.530232 4.2:+4343678 None:intergenic
TTGTGTAGCTGCGGTGAGGA+AGG 0.537663 4.2:-4343088 MS.gene048935:intron
TGACACTCATCGATCTTCCT+GGG 0.537665 4.2:-4342069 MS.gene048935:CDS
CAGTAATGAGGACAAACGCT+TGG 0.541024 4.2:+4336061 None:intergenic
GTTGCAATATCTTGATTAGC+CGG 0.541684 4.2:+4340986 None:intergenic
GCCGACAACACTCTCCAATA+CGG 0.542785 4.2:+4343582 None:intergenic
GAAGAGAATCCCAAAGAGTA+GGG 0.542886 4.2:+4343647 None:intergenic
CTATTTCAGCTTGGGCACTT+CGG 0.542999 4.2:+4335979 None:intergenic
CTTCCTGCTATCGCCGTCGT+TGG 0.543291 4.2:-4343628 MS.gene048935:CDS
GAACATTACCTTCTCAATGT+AGG 0.549204 4.2:+4341866 None:intergenic
CATCAACAGCTGCCTCGGCA+GGG 0.550496 4.2:+4338485 None:intergenic
CAGCTTCACAAGAGTGATGA+GGG 0.550682 4.2:-4343432 MS.gene048935:CDS
TACTGCATCAACAGCTGCCT+CGG 0.554965 4.2:+4338480 None:intergenic
TCATTCGCTATTAAAGGACC+TGG 0.558428 4.2:-4338137 MS.gene048935:CDS
AGGTTAAAGTTCCCTTGGAT+CGG 0.560301 4.2:-4339508 MS.gene048935:CDS
AATGAGAGATGAAAGCAAAA+GGG 0.561742 4.2:-4336801 MS.gene048935:CDS
AAACTTATTACAGAAGCTGA+TGG 0.561888 4.2:-4338583 MS.gene048935:CDS
TACAATCAGGGGCCCTGCCG+AGG 0.565034 4.2:-4338497 MS.gene048935:CDS
CATCTTATTGCTCCAGAGCA+AGG 0.566493 4.2:-4338550 MS.gene048935:CDS
TCGGAAGCTTCCTCAAGATG+TGG 0.572910 4.2:-4336726 MS.gene048935:CDS
CTGTTCACAACACCGATCCA+AGG 0.576821 4.2:+4339496 None:intergenic
CGATCTTCCTGGGCTTACGA+AGG 0.578446 4.2:-4342059 MS.gene048935:CDS
CTGGAGCAATAAGATGAGGT+TGG 0.582750 4.2:+4338557 None:intergenic
TGACAATAAACAATGGACTT+CGG 0.583582 4.2:+4336298 None:intergenic
AGGATCCTCATTCAGTAATG+AGG 0.586057 4.2:+4336049 None:intergenic
GGCAAAGATTTCTTACCTCG+TGG 0.586975 4.2:-4343562 MS.gene048935:CDS
CTTAGCATATATTCTCCCAA+TGG 0.587409 4.2:-4343000 MS.gene048935:intron
TCCCGTGAAGTGGATCCTAC+CGG 0.593357 4.2:-4340944 MS.gene048935:intron
TTGTGAAGCTGCAAAACAAG+TGG 0.596364 4.2:+4343444 None:intergenic
AATCTTCGTCAAAACTCCAA+TGG 0.598241 4.2:+4340661 None:intergenic
GCCCCTGATTGTAACTAGAG+TGG 0.598316 4.2:+4338507 None:intergenic
GCAGCTTCACAAGAGTGATG+AGG 0.600736 4.2:-4343433 MS.gene048935:CDS
ACAGCGACCTTCGTAAGCCC+AGG 0.603913 4.2:+4342052 None:intergenic
ATCCACTCTAGTTACAATCA+GGG 0.605709 4.2:-4338509 MS.gene048935:CDS
ACCGGTAGGATCCACTTCAC+GGG 0.605810 4.2:+4340943 None:intergenic
GCTTCCTCAAGATGTGGACA+AGG 0.607803 4.2:-4336720 MS.gene048935:CDS
ACACATACACGCCATCAAGA+TGG 0.610251 4.2:+4338798 None:intergenic
AGAACTCTGGCCACCAACGA+CGG 0.610611 4.2:+4343615 None:intergenic
GCCTGTTGCAGCTGATGCTG+GGG 0.614544 4.2:-4339124 MS.gene048935:intron
TATGGAGTCTGGCTATCTGA+CGG 0.622814 4.2:-4336759 MS.gene048935:CDS
ACAACTCCAGTCTCTTTGCA+AGG 0.623060 4.2:+4336003 None:intergenic
TGCTCTGGAGCAATAAGATG+AGG 0.624218 4.2:+4338553 None:intergenic
CCGTACTTGACAATAAACAA+TGG 0.625270 4.2:+4336291 None:intergenic
CAGGATTTGAAGCAATACCC+TGG 0.628775 4.2:-4336869 MS.gene048935:CDS
GGGCTTACGAAGGTCGCTGT+AGG 0.630278 4.2:-4342049 MS.gene048935:intron
TGTTCACAACACCGATCCAA+GGG 0.632790 4.2:+4339497 None:intergenic
GGTTCGCTCCTACATTGAGA+AGG 0.633877 4.2:-4341874 MS.gene048935:intron
TCTGGCGAAGATGCTCTCAA+AGG 0.634471 4.2:-4339356 MS.gene048935:intron
TCCACTCTAGTTACAATCAG+GGG 0.638669 4.2:-4338508 MS.gene048935:CDS
TGGACTTACATCAACAGCAT+CGG 0.640860 4.2:+4340619 None:intergenic
AACACCTAGCTAACAGAATG+GGG 0.640990 4.2:-4339387 MS.gene048935:CDS
GCAATTATGGAACGTCGTAG+TGG 0.642760 4.2:-4336026 MS.gene048935:CDS
TGTTTATTGTCAAGTACGGG+AGG 0.645558 4.2:-4336287 MS.gene048935:CDS
CCTCAAGATGTGGACAAGGG+TGG 0.645800 4.2:-4336716 MS.gene048935:CDS
GAAGATTGATCTAATGGACA+AGG 0.654022 4.2:-4340645 MS.gene048935:CDS
TTCACCGTGGTCACCTAAGG+CGG 0.656734 4.2:+4343681 None:intergenic
CAACCTCAGCCCGTAAACCA+GGG 0.671483 4.2:+4336852 None:intergenic
TGCACCGCCTTAGGTGACCA+CGG 0.675185 4.2:-4343685 MS.gene048935:CDS
TAATTTGTGTAGCTGCGGTG+AGG 0.676029 4.2:-4343092 MS.gene048935:intron
ATTTCCTACAGGCGACCTGG+AGG 0.691883 4.2:-4338697 MS.gene048935:intron
GACAACACTCTCCAATACGG+AGG 0.703245 4.2:+4343585 None:intergenic
CTTCCTCAAGATGTGGACAA+GGG 0.710629 4.2:-4336719 MS.gene048935:CDS
GAGTGGATTCAATGAGACGA+CGG 0.714501 4.2:+4338524 None:intergenic
AAGATTGATCTAATGGACAA+GGG 0.722186 4.2:-4340644 MS.gene048935:CDS
ATGTTGACATGATTGCTGCA+AGG 0.728270 4.2:-4339450 MS.gene048935:CDS
GGAGTGCACTAGATTCACCG+TGG 0.804143 4.2:+4343668 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 4335956 4343749 4335956 ID=MS.gene048935
chr4.2 mRNA 4335956 4343749 4335956 ID=MS.gene048935.t1;Parent=MS.gene048935
chr4.2 exon 4343557 4343749 4343557 ID=MS.gene048935.t1.exon1;Parent=MS.gene048935.t1
chr4.2 CDS 4343557 4343749 4343557 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4343376 4343483 4343376 ID=MS.gene048935.t1.exon2;Parent=MS.gene048935.t1
chr4.2 CDS 4343376 4343483 4343376 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4343001 4343102 4343001 ID=MS.gene048935.t1.exon3;Parent=MS.gene048935.t1
chr4.2 CDS 4343001 4343102 4343001 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4342050 4342100 4342050 ID=MS.gene048935.t1.exon4;Parent=MS.gene048935.t1
chr4.2 CDS 4342050 4342100 4342050 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4341875 4341936 4341875 ID=MS.gene048935.t1.exon5;Parent=MS.gene048935.t1
chr4.2 CDS 4341875 4341936 4341875 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4340945 4341035 4340945 ID=MS.gene048935.t1.exon6;Parent=MS.gene048935.t1
chr4.2 CDS 4340945 4341035 4340945 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4340628 4340692 4340628 ID=MS.gene048935.t1.exon7;Parent=MS.gene048935.t1
chr4.2 CDS 4340628 4340692 4340628 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4339357 4339551 4339357 ID=MS.gene048935.t1.exon8;Parent=MS.gene048935.t1
chr4.2 CDS 4339357 4339551 4339357 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4339125 4339244 4339125 ID=MS.gene048935.t1.exon9;Parent=MS.gene048935.t1
chr4.2 CDS 4339125 4339244 4339125 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4338806 4338876 4338806 ID=MS.gene048935.t1.exon10;Parent=MS.gene048935.t1
chr4.2 CDS 4338806 4338876 4338806 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4338483 4338708 4338483 ID=MS.gene048935.t1.exon11;Parent=MS.gene048935.t1
chr4.2 CDS 4338483 4338708 4338483 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4338111 4338161 4338111 ID=MS.gene048935.t1.exon12;Parent=MS.gene048935.t1
chr4.2 CDS 4338111 4338161 4338111 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4336660 4336888 4336660 ID=MS.gene048935.t1.exon13;Parent=MS.gene048935.t1
chr4.2 CDS 4336660 4336888 4336660 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4336237 4336376 4336237 ID=MS.gene048935.t1.exon14;Parent=MS.gene048935.t1
chr4.2 CDS 4336237 4336376 4336237 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
chr4.2 exon 4335956 4336084 4335956 ID=MS.gene048935.t1.exon15;Parent=MS.gene048935.t1
chr4.2 CDS 4335956 4336084 4335956 ID=cds.MS.gene048935.t1;Parent=MS.gene048935.t1
Gene Sequence

>MS.gene048935

ATGGAAAACCTAATCTCATTAGTCAACAAAATCCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACTCTTTGGGATTCTCTTCCTGCTATCGCCGTCGTTGGTGGCCAGAGTTCTGGAAAATCCTCCGTATTGGAGAGTGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGTATTTTTTTTTATACAATTGGGGATTGTGAATTGTGATTTGAAATTTGTTCATAATTGATGCGTATTTGTAGGGATCGTTACTCGGAGACCACTTGTTTTGCAGCTTCACAAGAGTGATGAGGGAACAAGAGAATATGCTGAGTTTCTTCACCTTCCGAGGAAAAGATTCACCGATTTTGGTAACTTTTCTTTTGTCACTCTAATCTTCGCGTTTTTTCCCCCATTGATTTTACTGATTTGAATGTTATTGACTCTATTTGACCATTTTCAAAATGTTTCTATATATGTATGAGTTTTTGTGTTTTTTTTTTTCTTCTTTTTCTCATTGCTATTTAGTAAATGATCGTGCTATTTAGATTTTACTGATTCAAATGTTTTTGACTCTATTTGACCGATTTTGAAATGTTTCCATGTATGTATGGATGGTAACGGTGATGGTTTAATTTGTGTAGCTGCGGTGAGGAAGGAAATTCAAGATGAAACGGATAGAGAAACCGGTCGATCCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCAATGGTACGTTTGATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAGGAGGGATCCATTGACTCCAAGAGTAAGTTTAATGACTTACTCCTAATCTTGGTCATTGATTTTAATATTAATTAATGGTTGTGATTAACTACTAATGACCTATATGGTAAGATTTTTCCTGCACCATCTCCCTAAAACAACCTACAAGGCTTCTTTGAGATGGAACAACGCCGAAACCACCTATATTTTCATCGGTTTTTTTGCTGACTAATCGAGATGATTTAGCTTGATATGTTTGAACAATGGAAATAATTTTGATTTGGTTTGGTGATAATTGGTATTGGATAATTAATTGTAAGTTATCAATTTATAAAGCAACCCTAATTCAAGAAAGTACATACTGGGACAAATTGGTACAAATTAGTTTAGCTTCATCTGCCCACAATTAAATCAAAGTAAGTTATGGATTGATAATGTGTAAGTATCATGTGTTTTCTTTCAAAACTGGTTGTCGCAAAAGTGCAGCCTCAAAGGTTGTTTTAGGGATAATGTTTTAGGGAGAAGGTGCAGAAAAATCATACCATATAGATCATTAGTAATTAATCACAACCATTAATTAATATTAAAATCAATGGCCAGGATTGGGAGTAAGTCATTAAACTTACTCTTGGAGCCAATGGATCCCTCCTCTATATATATATATATATATATTTTATTATCTATTGTTGTACTGCATCCCTTATTCTTATATATAATATGTAGATCTGTCGGTAACAATGCTTAAGTACAGAAGCATCATCTTGTGGTCTATTTGTTTGCTCATTTTATTCAAGTGTTGAATTATGGGTGACCTTTTGTGACTCTTGCAGTTGTTAACTTGACACTCATCGATCTTCCTGGGCTTACGAAGGTCGCTGTAGGTATGCAATCAATTGACATGTCTTTCCTGTACACGGTTTTAAGGCTATTTAGTGTGAATTTTATTTTCGTAATGATGTACGAGATGCTCATAGATATTTTTGCATAACTGTAGATGGGCAACCTGAGAGTATTGTGCATGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGGTAATGTTCATTTAAGTACTAAAGCTTTTAATAGGAAATAAAATATTTTCAGGATCAACTTATATGGTTTAATTTTTAAAAATAAATAACTAAGAAAAATATGGAGTGTAAGATCGTTTGAATTGTAGGATTCCCACAAATAGACAAAATTATAGAGATAAATAACTGAGAAAAATAACCTTTACATAATCATCCTATAGAAACATAACTTTTATCACTGATTTAATCATAAACATGAGAGGTTGACCGAAACAAATATAGATTTTTTTTTTATTAATTCCTACCACCGAATGATAATTGCATAGATTAAGAAGTTCCCAAGTTTGGAAGTAATTTCTCAACTAAAACCCAAGTCCCTGTATTTAAATAAAAACCCCACCGAGTCCCATAAAAAAAGTCCAAGTTCAGTGCATCCCTTTATGCAATGAAAAAACAGATCAACTTTCGAGTCAAAAAACAAAACCCAGGTTGTAAAGGTGTGAGTTGTTTGGGTCAAAAACGGTTCACCATGGGAAACCAACACTAGAGAAAACGCTGCCCCCGATTCAACGATTTTCCTCTGCGTGCTTACCACTCCGGTTTCTTCAACGATTTTCATGGTTGGAGGGAGAAAAACACGTGAGATCTAATGATATCACAATCTTAATCGTGCTCTTAACAACCATTCTAGAAAGTTTATCTTGCAAAGTTCTCTGATGTGCAAAAATGACGTGCTTACCTTGTATTATGTATGAACATCATTAATTTCAAAAACTGTGGCAAGTTCTTGGTATAACATTTGTGTAAAAATTAGGCCCATGTACGAAAAGCAGTATGCTGAAATTGATGTTATTTTGCAGCCGAACTGTATAATTTTGGCTATTTCACCGGCTAATCAAGATATTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGTACTTTCAATATTTCCTTTTCTTTGGCTTTTAGCGTTTCCCATTTTGAATGCATTTAACGAATCTTTTTATGGTTTGTTGAGAATCAATAATTCAATATTTCAATATGTTGTATATTTACACCGCAGATTTAACCATTATTCTAACTTTTTGCACTGTTGATTTTTGGAGAACAAGCTGACTGAATTGGGCAACATTAAGTAAATAGTTTGATGGTTTTCTAATCATTGGTTTATTTGTTTCAACTTTTAGGCGAAAGAACCATTGGAGTTTTGACGAAGATTGATCTAATGGACAAGGGTACCGATGCTGTTGATGTAAGTCCAATTATTTTTTTTATTTTAATATAATAGCATGCAAACATGGTTATAGTTTGTTACAAGGTCAAAACAATGGAAAAGGGGTCGAAGATCTTGCATATGTCTACTATTATTATTATTGTTGTTGTTATTATTATTACTATCATCATCATCATCATCATTATTATCTGTGAACTCTGCAACTTAGTGTTAGAATGTTGGGTCCATAATCCCAATTATGTATATCTATATAAATTGATCTAATGGACAAGGGTACCGATGCTGTTGATGTAAGTCCAATTATTTTTTTTATTTTAATATAATAGCATGCAAACATGGTTATAGTTTGTTACAAGGTCAAAACAATGGAAAAGGGGTCGAAGATCTTGCATATGTCTACTATTATTATTATTGTTGTTGTTATTATTATTACTATCATCATCATCATCATCATTATTATCTGTGAACTCTGCAACTTAGTGTTAGAATGTTGGGTCCATAATCCCAATTATGTATATCTATATAACCTTGTAAATACTCATTCTTTGCAAGTAGTAAAATATAATACATACAATTTTACATGGTTCATCCGCCTCCATCAAGTCAGGCTCCTTGGTTGAGTTAGTGCTAAGGTTGGGTATCATTCTATGGCATTGGTCACCTATGACTAATGAGCTTATCTGGATCAAGCAGCTAACTGATGAGTAGAAATTTACAGAGGTCTCTCATATGAAGTTGCTTTTTGATAATTATTAGTTGCTCTGTCAAAATAACTGTTAGCCTTCCATATTGAGGATATGGGCCTGATTTCAATTGACCTGCATTCTTATTTATTCTCTATGAGAATAACTTGTTAAGTATAGAATCTAGACATAGTTTCATATTTATAAGAACTAAGGAGTTGGGTGAATTGTTCATAAAGCTTGAAATTTCTCGTGTTAAAGTGTCTTTCTGCCTCAAACCGATTAATCCTTGCTCACCCCCTCGAGTTTATAGCATAACCCTGATAATGATCAGTTGTTTTATTCTAAGAAGCTATAAAAGTAAATACTTGATTCTGTACTGATCCATGATATATACTTTTGCTTGCTCAGATGTTGGAAGGGAGAGCATATAGGTTAAAGTTCCCTTGGATCGGTGTTGTGAACAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATAGTACTCCTGAATATAAACACCTAGCTAACAGAATGGGGTCTGAGCATCTGGCGAAGATGCTCTCAAAGGTACATCAAAAACAATATATAGCATCATTTGCTGAAATATTAGGTGTTCATTTTTATGTAAATCTGTTTTAGTAGCTTCCAACAACTAAAGTCATATTGATTTTTATATCAGCATTTGGAGACAGTAATCAAGTCCAAGATTCCAGGCATTCAGTCTCTAATTAGCAAAACAATAAATGAAATTGAAACCGAACTGGCTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGTAAGTTTGCTCTTATTTTCTAGCCATTTTAAATTCTCTGTTCCAAAACCATTGGTTACCTTGTCTTTCCCTCCAGACTTCTGTCATTTGTGTGTGTTTATACGGGCATTCGTCCCACATAATATCCATTTATTTTGATGAACTTAAATATTGATGTGGTGATGATTGGATAATATGACACTCCATTTTCAGGGATCCTTATTAAGTGTTTTCATGTTGACTAATGACTGCTTTGCCATCACATGCAGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTCAAAGACCATCTTGATGGCGTGTATGTGTTATACTTTTCTGATTGAAGTTAACATTTTACTGTGCAATTCGTTTGTTTTTTCATGCTGTATTTCCTTATTTGTGTCAATTTCCTACAGGCGACCTGGAGGTGATAAAATTTATAACGTCTTTGACAACCAGCTCCCTGCTGCTCTGAAAAGGTTGCAGTTTGACAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGATACCAACCTCATCTTATTGCTCCAGAGCAAGGATACCGTCGTCTCATTGAATCCACTCTAGTTACAATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCAGTATGTTTTTCACAAGAGAATTATCAATAGCAATTGAAATTTTGTACCCAATTTTTTTGAGAACTTATGTGGTAGTGGTGGTGTGCTATAAAGAATGTGTTGAAATAAAATACTTGATTAAAGAGAAAAAAAAAAAAAAAACTTTAGCCTCAAACATCAACCCTGTCTAAAAGCTGTAAATTAGTGATTTTTCTAATTGGATACTTTTTTATGTATTATGTGTTTTTGTCTTGGTTAATCTACTTAAGCATTCAGCTTTAATCTTTTGCTGATCTCTTTGGTCATACTCATTGAATTCTTGTTTTGAATTGATTCTTCCAGGTTCATTCGCTATTAAAGGACCTGGTTCACAAAGCTGTTAGTGAGACTCTGGTTTGTTCCTGGGACTTCTCATTTTACATTCCAGTTTTATTTCTTGCTGCTATATTTGTTCTAAATAAATTGTATAATTGCTGGTGCTCTTATTTCGCCGGGGAATTCTAGTGACAATGTTCATTTGGAAACAGCATTTGAATGGCTTCAATTTTAGAAGTTGAAATGTGCAGAGCTTTCGGGTTTTCTTTGATTGAGTATTAAGATATTTGTTCTAACTATCCCTCTGTATTTGCTTTGAGAATTCTAGAAGTGTTTGAGATAAAGGGTTTTCTTTCGGGTTTTCTTCGATTTTTTGTCCCTATAAATTTTCTGCTTTCAACTTCAGTACCTGCTTTTTTTACAAAAGTTCATGTTTTGTGTTCCAAATGACTTTTTTTAAGGTCTTATCAGTGATATGTCATCAAAAAAAGTCGCTTGGAACATGAAACGTGAACTTTTGTAAAAAACAGGAATTGAAATTGAAACCAGAAATTTAGAGGACCAAAAATCAAAGGAGAATTTTGGAGGGACGAAAACTGAAAGTTGGTATACTTAGAGGGGAGTAAAAACAATTTTAACACTACAAAATATAACCCATTCATATATTTACTTCTATTTTCTATTTATGGAATTATCATATAACCTGTACTTGTGAAAAGTCCATTTGACTAAACAATGATAATTATATTTTGTTACATGATAAGGGCCAGTATGAATTGAGCTTATCTACTGTCATAAGTTTTATGAGACTGTTTGGGGGAACATATGGAAACAGCTTATGACATTTTTCATAAGCTTATTTTAATTAGTTCTCCAAGATAGCTTATGAAAACAACTTATATCATATCCAAAAACAATTTAACTGCATTTTATCTTCTGCTATAGAAATAGCATATGTAAGCTTATACATACGTGCTTATCATAATAAGCAGTTGTGACATAAGCTGCAAATAAGCTGTTTATCCAAACAGGGCCTAAATCTGTTCATTATTGAGTTCAAGTGTTAAAATAAAATATGTAACTGAAATAGTGATGTAGGTTATCTTTTTGTAATGCTATGGGCATTGGCAATGACTTTTGGCCTCTGTTCTGCTGTTTCATTGCTACTTTCTTGCAGTTCTTCTGCACAGGTTTACTTGCCCTTTTTGTAATAGTTGTTCATGATTAAATTAATACAATTGGAACCTGGTTTTCATTTACTGGCAATTTTCTCATCAATACTGGCTTTGTTTATTCTCAGGATTTGAAGCAATACCCTGGTTTACGGGCTGAGGTTGGGGCTGCAGCTATTGATTCGTTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACATTACAACTGGTCGATATGGAGTCTGGCTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGACAAGGGTGGCAACCCCACTCATTCAATTTTTGATAGATATAATGATTCTTATCTAAGGCGAATCGGTATGTCTTATTAAAAGTAGTCTCAAACTTGAACGGACAGTATATGGTTGCTCTCATAGTTTAATACTCCCTCCGGTCATTATTATAAGCAAAACTTCACTTTTTAGATACATTGAATAATTAATGTATCTAGTCTTTATTATAAACTAGATACATTAATTATCCAATATATTTAAAAAGTGAAGTTTTGCTTATAATAGTGACCGGAGGGAGTATAGTATATCATCTGTCATTGTTAAATGGAACTTAAAACTGACTGTTCAATCTCACTCTGCGTATTCAGGAACAACAATTTTGTCATATGTCAATATGGTCTGCGCTACTCTACGACATTCAATTCCGAAGTCCATTGTTTATTGTCAAGTACGGGAGGCAAAAAGAAGCCTACTTGATCACTTTTTCACTGAGCTAGGAAAAATGGAGGTGAGAATAAATTTGCCTCTCCAAGTTTCCTGATTATACTTTTCATTTATTCAAAAAACTTGCTTAAAAGCAAAAAATTATTGAGCTGCTTTTAATTTAGTTTTTAAAGTTAAATAAATTAAGCGTTGTCTGCCTGTATATACTCTTTGCAGACCAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGCAAAGAGACTGGAGTTGTACCGAAGTGCCCAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAA
Protein sequence

>MS.gene048935.t1

MENLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTINEIETELARLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK