Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049586.t1 | RHN67914.1 | 50.3 | 1170 | 253 | 12 | 1 | 858 | 734 | 1887 | 5.70E-266 | 927.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049586.t1 | A0A396IU65 | 50.3 | 1170 | 253 | 12 | 1 | 858 | 734 | 1887 | 4.1e-266 | 927.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049582 | MS.gene049586 | 0.809191 | 2.14E-50 | -1.69E-46 |
MS.gene049586 | MS.gene049592 | 0.801854 | 7.40E-49 | -1.69E-46 |
MS.gene049586 | MS.gene053147 | 0.835749 | 1.40E-56 | -1.69E-46 |
MS.gene049586 | MS.gene054467 | 0.80532 | 1.41E-49 | -1.69E-46 |
MS.gene049586 | MS.gene054468 | 0.81784 | 2.68E-52 | -1.69E-46 |
MS.gene049586 | MS.gene054581 | 0.834283 | 3.28E-56 | -1.69E-46 |
MS.gene049586 | MS.gene069326 | 0.803008 | 4.28E-49 | -1.69E-46 |
MS.gene049586 | MS.gene29848 | 0.801096 | 1.06E-48 | -1.69E-46 |
MS.gene049586 | MS.gene31282 | 0.808873 | 2.50E-50 | -1.69E-46 |
MS.gene049586 | MS.gene33228 | 0.800583 | 1.35E-48 | -1.69E-46 |
MS.gene049586 | MS.gene37481 | 0.802863 | 4.58E-49 | -1.69E-46 |
MS.gene049586 | MS.gene93172 | 0.800302 | 1.54E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049586.t1 | MTR_3g062320 | 50.000 | 958 | 332 | 23 | 1 | 858 | 696 | 1606 | 0.0 | 753 |
MS.gene049586.t1 | MTR_3g435040 | 69.043 | 533 | 126 | 6 | 1 | 504 | 403 | 925 | 0.0 | 719 |
MS.gene049586.t1 | MTR_3g435040 | 34.446 | 929 | 363 | 31 | 112 | 849 | 741 | 1614 | 5.20e-106 | 359 |
MS.gene049586.t1 | MTR_3g435040 | 69.043 | 533 | 126 | 6 | 1 | 504 | 403 | 925 | 0.0 | 717 |
MS.gene049586.t1 | MTR_3g435040 | 27.048 | 647 | 310 | 26 | 112 | 653 | 741 | 1330 | 1.92e-30 | 130 |
MS.gene049586.t1 | MTR_3g062090 | 70.713 | 519 | 123 | 6 | 1 | 494 | 703 | 1217 | 0.0 | 717 |
MS.gene049586.t1 | MTR_3g062090 | 28.120 | 633 | 289 | 25 | 184 | 681 | 1074 | 1675 | 1.97e-29 | 127 |
MS.gene049586.t1 | MTR_3g435040 | 69.043 | 533 | 126 | 6 | 1 | 504 | 403 | 925 | 0.0 | 717 |
MS.gene049586.t1 | MTR_3g435040 | 27.205 | 669 | 323 | 25 | 112 | 653 | 741 | 1372 | 1.98e-33 | 139 |
MS.gene049586.t1 | MTR_3g062090 | 70.713 | 519 | 123 | 6 | 1 | 494 | 703 | 1217 | 0.0 | 714 |
MS.gene049586.t1 | MTR_3g062090 | 28.326 | 639 | 290 | 26 | 184 | 685 | 1074 | 1681 | 2.55e-29 | 126 |
MS.gene049586.t1 | MTR_3g435040 | 68.785 | 535 | 126 | 7 | 1 | 504 | 403 | 927 | 0.0 | 714 |
MS.gene049586.t1 | MTR_3g435040 | 34.412 | 927 | 366 | 30 | 112 | 849 | 743 | 1616 | 5.97e-106 | 359 |
MS.gene049586.t1 | MTR_3g435040 | 68.785 | 535 | 126 | 7 | 1 | 504 | 618 | 1142 | 0.0 | 712 |
MS.gene049586.t1 | MTR_3g435040 | 34.446 | 929 | 363 | 31 | 112 | 849 | 958 | 1831 | 2.43e-105 | 358 |
MS.gene049586.t1 | MTR_3g435040 | 68.785 | 535 | 126 | 7 | 1 | 504 | 618 | 1142 | 0.0 | 712 |
MS.gene049586.t1 | MTR_3g435040 | 34.301 | 930 | 366 | 30 | 112 | 849 | 958 | 1834 | 5.06e-105 | 357 |
MS.gene049586.t1 | MTR_3g435040 | 68.785 | 535 | 126 | 7 | 1 | 504 | 403 | 927 | 0.0 | 712 |
MS.gene049586.t1 | MTR_3g435040 | 34.602 | 867 | 384 | 29 | 112 | 849 | 743 | 1555 | 3.67e-101 | 345 |
MS.gene049586.t1 | MTR_3g062420 | 71.947 | 524 | 116 | 6 | 1 | 500 | 713 | 1229 | 0.0 | 711 |
MS.gene049586.t1 | MTR_3g062420 | 32.455 | 949 | 376 | 35 | 112 | 856 | 1052 | 1939 | 1.63e-87 | 306 |
MS.gene049586.t1 | MTR_3g062140 | 73.819 | 508 | 89 | 3 | 1 | 502 | 693 | 1162 | 0.0 | 710 |
MS.gene049586.t1 | MTR_3g062140 | 32.207 | 829 | 369 | 27 | 112 | 828 | 999 | 1746 | 4.95e-79 | 280 |
MS.gene049586.t1 | MTR_3g435040 | 68.785 | 535 | 126 | 7 | 1 | 504 | 403 | 927 | 0.0 | 709 |
MS.gene049586.t1 | MTR_3g435040 | 25.818 | 550 | 289 | 22 | 112 | 579 | 743 | 1255 | 1.49e-20 | 98.2 |
MS.gene049586.t1 | MTR_3g063010 | 66.667 | 528 | 140 | 6 | 1 | 504 | 710 | 1225 | 0.0 | 679 |
MS.gene049586.t1 | MTR_3g063010 | 36.223 | 842 | 361 | 31 | 112 | 858 | 1042 | 1802 | 7.67e-102 | 348 |
MS.gene049586.t1 | MTR_3g062970 | 69.583 | 480 | 134 | 4 | 1 | 472 | 711 | 1186 | 0.0 | 658 |
MS.gene049586.t1 | MTR_3g467640 | 72.083 | 480 | 117 | 4 | 1 | 473 | 556 | 1025 | 0.0 | 650 |
MS.gene049586.t1 | MTR_3g466750 | 63.977 | 533 | 162 | 5 | 1 | 504 | 698 | 1229 | 0.0 | 641 |
MS.gene049586.t1 | MTR_3g466750 | 37.832 | 867 | 377 | 25 | 112 | 858 | 1044 | 1868 | 1.70e-126 | 419 |
MS.gene049586.t1 | MTR_3g452250 | 62.738 | 526 | 139 | 7 | 1 | 504 | 714 | 1204 | 0.0 | 625 |
MS.gene049586.t1 | MTR_3g452250 | 62.300 | 313 | 67 | 7 | 582 | 858 | 1582 | 1879 | 3.21e-96 | 332 |
MS.gene049586.t1 | MTR_3g452250 | 27.604 | 576 | 301 | 25 | 112 | 620 | 1024 | 1550 | 1.77e-23 | 107 |
MS.gene049586.t1 | MTR_3g451150 | 62.548 | 526 | 140 | 7 | 1 | 504 | 714 | 1204 | 0.0 | 624 |
MS.gene049586.t1 | MTR_3g451150 | 62.300 | 313 | 67 | 7 | 582 | 858 | 1582 | 1879 | 3.21e-96 | 332 |
MS.gene049586.t1 | MTR_3g451150 | 27.604 | 576 | 301 | 25 | 112 | 620 | 1024 | 1550 | 1.77e-23 | 107 |
MS.gene049586.t1 | MTR_3g062340 | 60.489 | 491 | 111 | 9 | 1 | 419 | 714 | 1193 | 5.52e-157 | 504 |
MS.gene049586.t1 | MTR_3g062340 | 66.295 | 359 | 85 | 4 | 535 | 858 | 1592 | 1949 | 2.56e-127 | 422 |
MS.gene049586.t1 | MTR_3g062340 | 27.985 | 804 | 354 | 30 | 47 | 702 | 882 | 1608 | 4.33e-47 | 183 |
MS.gene049586.t1 | MTR_3g062990 | 68.210 | 324 | 93 | 2 | 1 | 318 | 725 | 1044 | 1.41e-134 | 428 |
MS.gene049586.t1 | MTR_3g464840 | 50.200 | 500 | 184 | 13 | 1 | 487 | 695 | 1142 | 1.20e-125 | 416 |
MS.gene049586.t1 | MTR_3g464840 | 38.870 | 584 | 250 | 20 | 333 | 845 | 1168 | 1715 | 1.84e-84 | 296 |
MS.gene049586.t1 | MTR_3g464920 | 41.906 | 661 | 304 | 17 | 1 | 623 | 703 | 1321 | 1.44e-122 | 407 |
MS.gene049586.t1 | MTR_3g464920 | 44.893 | 421 | 148 | 13 | 503 | 858 | 1340 | 1741 | 8.71e-74 | 265 |
MS.gene049586.t1 | MTR_3g464950 | 39.716 | 705 | 289 | 19 | 1 | 623 | 698 | 1348 | 9.46e-119 | 396 |
MS.gene049586.t1 | MTR_3g464950 | 45.833 | 432 | 148 | 13 | 503 | 858 | 1367 | 1788 | 4.90e-78 | 277 |
MS.gene049586.t1 | MTR_3g062220 | 85.217 | 230 | 33 | 1 | 1 | 229 | 693 | 922 | 2.65e-118 | 381 |
MS.gene049586.t1 | MTR_3g048690 | 48.963 | 482 | 199 | 11 | 1 | 472 | 643 | 1087 | 1.29e-116 | 384 |
MS.gene049586.t1 | MTR_3g048690 | 55.556 | 180 | 39 | 2 | 584 | 763 | 1117 | 1255 | 1.96e-43 | 171 |
MS.gene049586.t1 | MTR_3g464870 | 45.506 | 534 | 199 | 15 | 1 | 512 | 703 | 1166 | 1.88e-113 | 379 |
MS.gene049586.t1 | MTR_3g464870 | 24.036 | 674 | 343 | 27 | 73 | 618 | 864 | 1496 | 2.16e-11 | 68.6 |
MS.gene049586.t1 | MTR_3g464870 | 45.506 | 534 | 199 | 15 | 1 | 512 | 703 | 1166 | 4.01e-113 | 381 |
MS.gene049586.t1 | MTR_3g464870 | 47.200 | 375 | 110 | 8 | 562 | 858 | 1513 | 1877 | 1.09e-75 | 270 |
MS.gene049586.t1 | MTR_3g464870 | 24.036 | 674 | 343 | 27 | 73 | 618 | 864 | 1496 | 1.98e-11 | 68.6 |
MS.gene049586.t1 | MTR_3g031750 | 47.166 | 441 | 181 | 7 | 90 | 504 | 988 | 1402 | 6.46e-110 | 372 |
MS.gene049586.t1 | MTR_3g031750 | 42.694 | 438 | 206 | 9 | 51 | 459 | 712 | 1133 | 1.96e-82 | 291 |
MS.gene049586.t1 | MTR_3g031750 | 35.714 | 196 | 89 | 7 | 496 | 662 | 1507 | 1694 | 1.28e-12 | 72.8 |
MS.gene049586.t1 | MTR_3g464810 | 46.080 | 523 | 204 | 17 | 1 | 480 | 698 | 1185 | 1.88e-108 | 367 |
MS.gene049586.t1 | MTR_3g464810 | 48.209 | 363 | 121 | 9 | 523 | 819 | 1496 | 1857 | 3.88e-74 | 266 |
MS.gene049586.t1 | MTR_3g464810 | 25.575 | 696 | 363 | 34 | 38 | 654 | 848 | 1467 | 3.96e-16 | 84.0 |
MS.gene049586.t1 | MTR_3g466710 | 45.929 | 479 | 168 | 10 | 1 | 477 | 702 | 1091 | 8.86e-105 | 350 |
MS.gene049586.t1 | MTR_3g027360 | 70.000 | 250 | 40 | 4 | 574 | 801 | 42 | 278 | 1.56e-104 | 324 |
MS.gene049586.t1 | MTR_7g026250 | 64.808 | 287 | 55 | 3 | 1 | 285 | 685 | 927 | 7.06e-103 | 340 |
MS.gene049586.t1 | MTR_3g062130 | 45.142 | 494 | 158 | 14 | 408 | 858 | 2 | 425 | 2.62e-100 | 318 |
MS.gene049586.t1 | MTR_4g027125 | 59.677 | 310 | 65 | 4 | 1 | 250 | 133 | 442 | 2.80e-97 | 311 |
MS.gene049586.t1 | MTR_3g062980 | 36.533 | 750 | 295 | 26 | 180 | 858 | 59 | 698 | 2.83e-95 | 314 |
MS.gene049586.t1 | MTR_4g027255 | 59.032 | 310 | 67 | 4 | 1 | 250 | 428 | 737 | 3.01e-94 | 312 |
MS.gene049586.t1 | MTR_0922s0020 | 63.877 | 227 | 53 | 3 | 646 | 858 | 1 | 212 | 4.79e-85 | 270 |
MS.gene049586.t1 | MTR_3g467340 | 50.464 | 323 | 139 | 6 | 1 | 314 | 705 | 1015 | 1.82e-82 | 286 |
MS.gene049586.t1 | MTR_0854s0010 | 47.059 | 323 | 149 | 6 | 1 | 313 | 178 | 488 | 2.21e-82 | 274 |
MS.gene049586.t1 | MTR_3g062010 | 38.278 | 546 | 224 | 17 | 335 | 858 | 790 | 1244 | 6.30e-82 | 287 |
MS.gene049586.t1 | MTR_3g062010 | 40.753 | 292 | 129 | 6 | 1 | 248 | 707 | 998 | 9.58e-48 | 184 |
MS.gene049586.t1 | MTR_3g062010 | 32.902 | 386 | 190 | 9 | 91 | 472 | 698 | 1018 | 1.74e-43 | 171 |
MS.gene049586.t1 | MTR_3g062020 | 57.812 | 256 | 65 | 1 | 1 | 256 | 559 | 771 | 7.46e-82 | 280 |
MS.gene049586.t1 | MTR_2g049960 | 58.300 | 247 | 77 | 2 | 638 | 858 | 77 | 323 | 2.04e-81 | 265 |
MS.gene049586.t1 | MTR_3g062180 | 36.469 | 606 | 244 | 21 | 323 | 828 | 64 | 628 | 2.02e-79 | 270 |
MS.gene049586.t1 | MTR_3g062400 | 53.791 | 277 | 63 | 4 | 633 | 858 | 30 | 292 | 1.76e-78 | 256 |
MS.gene049586.t1 | MTR_3g048607 | 48.615 | 325 | 142 | 7 | 1 | 313 | 755 | 1066 | 4.79e-75 | 266 |
MS.gene049586.t1 | MTR_3g466580 | 52.174 | 253 | 116 | 2 | 1 | 251 | 706 | 955 | 8.18e-72 | 255 |
MS.gene049586.t1 | MTR_3g062230 | 67.797 | 177 | 35 | 2 | 349 | 504 | 2 | 177 | 5.95e-66 | 234 |
MS.gene049586.t1 | MTR_3g062230 | 26.978 | 556 | 246 | 24 | 184 | 621 | 20 | 533 | 9.75e-25 | 110 |
MS.gene049586.t1 | MTR_0067s0070 | 54.852 | 237 | 105 | 1 | 1 | 235 | 707 | 943 | 2.58e-65 | 238 |
MS.gene049586.t1 | MTR_0067s0070 | 60.390 | 154 | 59 | 2 | 320 | 472 | 941 | 1093 | 1.18e-46 | 181 |
MS.gene049586.t1 | MTR_2g451270 | 49.798 | 247 | 70 | 3 | 638 | 858 | 33 | 251 | 7.61e-60 | 204 |
MS.gene049586.t1 | MTR_2g023000 | 35.356 | 478 | 175 | 14 | 367 | 808 | 31 | 410 | 3.30e-54 | 194 |
MS.gene049586.t1 | MTR_1344s0010 | 38.438 | 320 | 119 | 7 | 1 | 313 | 176 | 424 | 2.87e-47 | 175 |
MS.gene049586.t1 | MTR_3g069220 | 72.807 | 114 | 29 | 1 | 670 | 783 | 26 | 137 | 4.37e-47 | 165 |
MS.gene049586.t1 | MTR_3g451650 | 39.319 | 323 | 118 | 7 | 1 | 313 | 709 | 963 | 5.25e-47 | 182 |
MS.gene049586.t1 | MTR_7g026240 | 66.667 | 129 | 36 | 1 | 730 | 858 | 211 | 332 | 4.82e-46 | 168 |
MS.gene049586.t1 | MTR_3g466520 | 39.564 | 321 | 112 | 7 | 1 | 313 | 670 | 916 | 7.42e-46 | 178 |
MS.gene049586.t1 | MTR_1147s0010 | 53.801 | 171 | 56 | 3 | 676 | 846 | 13 | 160 | 5.13e-44 | 156 |
MS.gene049586.t1 | MTR_3g048603 | 55.147 | 136 | 52 | 3 | 339 | 472 | 1 | 129 | 1.04e-38 | 141 |
MS.gene049586.t1 | MTR_1236s0010 | 56.115 | 139 | 56 | 3 | 338 | 472 | 1 | 138 | 1.42e-38 | 141 |
MS.gene049586.t1 | MTR_3g466550 | 71.429 | 91 | 26 | 0 | 768 | 858 | 22 | 112 | 1.43e-37 | 136 |
MS.gene049586.t1 | MTR_3g063320 | 85.000 | 80 | 12 | 0 | 779 | 858 | 60 | 139 | 3.68e-37 | 136 |
MS.gene049586.t1 | MTR_3g466530 | 48.691 | 191 | 79 | 6 | 325 | 498 | 1 | 189 | 5.83e-37 | 149 |
MS.gene049586.t1 | MTR_3g062050 | 53.947 | 152 | 43 | 4 | 353 | 496 | 1 | 133 | 1.51e-36 | 142 |
MS.gene049586.t1 | MTR_2g450490 | 71.429 | 91 | 26 | 0 | 768 | 858 | 180 | 270 | 3.86e-36 | 138 |
MS.gene049586.t1 | MTR_5g092190 | 27.747 | 537 | 280 | 21 | 4 | 457 | 729 | 1240 | 1.45e-30 | 130 |
MS.gene049586.t1 | MTR_0836s0010 | 49.242 | 132 | 62 | 3 | 345 | 472 | 1 | 131 | 8.13e-30 | 116 |
MS.gene049586.t1 | MTR_5g085400 | 26.000 | 650 | 329 | 21 | 62 | 598 | 1005 | 1615 | 1.21e-28 | 124 |
MS.gene049586.t1 | MTR_5g085400 | 29.368 | 269 | 131 | 8 | 2 | 251 | 699 | 927 | 1.09e-18 | 92.4 |
MS.gene049586.t1 | MTR_5g085400 | 30.864 | 162 | 81 | 6 | 341 | 472 | 784 | 944 | 3.90e-11 | 67.8 |
MS.gene049586.t1 | MTR_1g031830 | 36.979 | 192 | 99 | 3 | 329 | 500 | 976 | 1165 | 1.85e-28 | 124 |
MS.gene049586.t1 | MTR_1g031830 | 35.102 | 245 | 143 | 4 | 1 | 229 | 764 | 1008 | 6.55e-27 | 119 |
MS.gene049586.t1 | MTR_3g055230 | 28.994 | 507 | 273 | 18 | 1 | 453 | 726 | 1199 | 2.72e-28 | 123 |
MS.gene049586.t1 | MTR_3g451630 | 46.212 | 132 | 66 | 3 | 345 | 472 | 1 | 131 | 3.31e-28 | 111 |
MS.gene049586.t1 | MTR_3g055230 | 28.994 | 507 | 273 | 18 | 1 | 453 | 726 | 1199 | 4.46e-28 | 122 |
MS.gene049586.t1 | MTR_3g055230 | 28.994 | 507 | 273 | 18 | 1 | 453 | 726 | 1199 | 4.68e-28 | 122 |
MS.gene049586.t1 | MTR_3g053200 | 27.237 | 514 | 276 | 21 | 1 | 453 | 714 | 1190 | 1.06e-27 | 121 |
MS.gene049586.t1 | MTR_3g055230 | 33.457 | 269 | 151 | 6 | 1 | 251 | 726 | 984 | 1.32e-25 | 114 |
MS.gene049586.t1 | MTR_3g466620 | 58.586 | 99 | 40 | 1 | 1 | 98 | 716 | 814 | 2.25e-24 | 110 |
MS.gene049586.t1 | MTR_3g464830 | 44.366 | 142 | 59 | 5 | 172 | 309 | 16 | 141 | 2.98e-24 | 100 |
MS.gene049586.t1 | MTR_3g055210 | 35.319 | 235 | 139 | 5 | 1 | 227 | 713 | 942 | 9.05e-24 | 108 |
MS.gene049586.t1 | MTR_3g053180 | 31.203 | 266 | 166 | 5 | 1 | 251 | 714 | 977 | 7.55e-22 | 102 |
MS.gene049586.t1 | MTR_3g053180 | 31.203 | 266 | 166 | 5 | 1 | 251 | 714 | 977 | 7.57e-22 | 102 |
MS.gene049586.t1 | MTR_8g464870 | 25.573 | 524 | 298 | 18 | 1 | 472 | 721 | 1204 | 1.76e-17 | 88.2 |
MS.gene049586.t1 | MTR_3g062060 | 40.000 | 130 | 46 | 2 | 511 | 608 | 3 | 132 | 4.37e-17 | 84.0 |
MS.gene049586.t1 | MTR_7g068110 | 26.250 | 160 | 116 | 1 | 699 | 856 | 59 | 218 | 2.33e-11 | 64.7 |
MS.gene049586.t1 | MTR_3g062390 | 32.161 | 199 | 83 | 7 | 408 | 575 | 2 | 179 | 2.91e-11 | 63.5 |
MS.gene049586.t1 | MTR_2g072150 | 23.413 | 504 | 316 | 17 | 28 | 487 | 773 | 1250 | 3.50e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 150 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTGACCTTTCTTAATTT+TGG | 0.060050 | 3.2:-58492287 | None:intergenic |
AAGAAGCCATCTTCCATTTC+TGG | 0.146104 | 3.2:+58491061 | MS.gene049586:CDS |
GCTCGACAGAATGGATAATT+TGG | 0.240679 | 3.2:+58490484 | MS.gene049586:CDS |
AAATGCATTGCAAAAGATAT+TGG | 0.248077 | 3.2:+58497058 | MS.gene049586:CDS |
GAGCAATTGGAATACATAAT+TGG | 0.256367 | 3.2:+58492320 | MS.gene049586:CDS |
GATAAGCTGAAATACATATT+TGG | 0.259042 | 3.2:+58490935 | MS.gene049586:CDS |
ACGCATCTCTTCAACTTCTT+TGG | 0.259257 | 3.2:-58497099 | None:intergenic |
ACAACACTGTTGGCAATAAC+TGG | 0.259872 | 3.2:+58492252 | MS.gene049586:CDS |
TGAAGATTTAAGTTCTTCTT+TGG | 0.267166 | 3.2:+58496713 | MS.gene049586:CDS |
GAAAGTCTCCGAAGCTGTTT+TGG | 0.282147 | 3.2:+58497172 | MS.gene049586:CDS |
TAAAACCCCATTGCTTTCTA+AGG | 0.291403 | 3.2:+58491183 | MS.gene049586:CDS |
GACATTGTACGATTACATTC+TGG | 0.306922 | 3.2:-58491028 | None:intergenic |
ATTCATATTGCCTTAACATA+TGG | 0.309524 | 3.2:+58492042 | MS.gene049586:CDS |
CCTACTGTCGTTGGAGAGAT+TGG | 0.310186 | 3.2:+58490691 | MS.gene049586:CDS |
AATGGAAGATGGCTTCTTAA+TGG | 0.310575 | 3.2:-58491056 | None:intergenic |
CAAATGTTTACAATACTTGA+TGG | 0.325827 | 3.2:-58490564 | None:intergenic |
TCTTTAGATTGAATAGGTTT+AGG | 0.327430 | 3.2:-58490607 | None:intergenic |
AGGCTCAATATTTCAGAAAC+TGG | 0.331699 | 3.2:+58490811 | MS.gene049586:CDS |
GCAGGAATTGAGTGGGAATA+TGG | 0.336326 | 3.2:+58494199 | MS.gene049586:intron |
TCATTCATCATTAGGTCAAT+TGG | 0.343060 | 3.2:+58496035 | MS.gene049586:CDS |
CTAACACATCCAACACACTA+TGG | 0.343716 | 3.2:-58496917 | None:intergenic |
AAAGTCTCCAACAACATTCT+TGG | 0.352015 | 3.2:-58492173 | None:intergenic |
GAACTTGTTGAAAATGTTCC+TGG | 0.359553 | 3.2:+58495448 | MS.gene049586:CDS |
AGTTAAAGTTTGTGAGCAAT+TGG | 0.360088 | 3.2:+58492307 | MS.gene049586:CDS |
TCAGCACCTCATTCATCATT+AGG | 0.360901 | 3.2:+58496027 | MS.gene049586:CDS |
CAATATATATTGCATTTGAT+TGG | 0.371765 | 3.2:-58491115 | None:intergenic |
AAATGTTGTGTGATATTGTT+TGG | 0.390087 | 3.2:-58492447 | None:intergenic |
TCATCTTCATCTTCCAGTAT+TGG | 0.391900 | 3.2:+58492379 | MS.gene049586:CDS |
TCAACCGCAGGACAATTTAA+TGG | 0.392830 | 3.2:+58491207 | MS.gene049586:CDS |
TAGCTCAGCTAGACAGTTGT+AGG | 0.394123 | 3.2:-58496877 | None:intergenic |
CATTGCTCCAAGAATGTTGT+TGG | 0.394132 | 3.2:+58492166 | MS.gene049586:CDS |
GGGAAAATGTCGATGAAATT+CGG | 0.397380 | 3.2:-58491007 | None:intergenic |
ATACCTTCAGAAGGCTTTGA+AGG | 0.406731 | 3.2:-58496597 | None:intergenic |
CTTCTTTGGTTACACACTGC+TGG | 0.407302 | 3.2:-58497085 | None:intergenic |
AGAACGAAGGCCTCCAATAC+TGG | 0.408085 | 3.2:-58492392 | None:intergenic |
TTCATATTGCCTTAACATAT+GGG | 0.412525 | 3.2:+58492043 | MS.gene049586:CDS |
TTCACCTTCATCATCATTAG+TGG | 0.413717 | 3.2:-58496410 | None:intergenic |
ACACACTCTTTAGATTGAAT+AGG | 0.414018 | 3.2:-58490613 | None:intergenic |
ACAAATGATACTTTCTACTT+TGG | 0.415861 | 3.2:-58494264 | None:intergenic |
ACATAATAGATGAAAGAAAA+GGG | 0.418797 | 3.2:+58490741 | MS.gene049586:CDS |
TACATAATAGATGAAAGAAA+AGG | 0.422807 | 3.2:+58490740 | MS.gene049586:CDS |
CTCGGAAGCATCTCCAGAAA+TGG | 0.423130 | 3.2:-58491074 | None:intergenic |
GGGAACCAAGCTGGACATCT+TGG | 0.431133 | 3.2:-58490958 | None:intergenic |
TCTTCATCTTCCAGTATTGG+AGG | 0.433725 | 3.2:+58492382 | MS.gene049586:CDS |
GTTGATCCTTAGAAAGCAAT+GGG | 0.439444 | 3.2:-58491189 | None:intergenic |
GATGTGGTTTCGATAAAGAT+TGG | 0.440119 | 3.2:+58496985 | MS.gene049586:CDS |
CATCCAACACACTATGGGTT+TGG | 0.445633 | 3.2:-58496911 | None:intergenic |
ATTGGTTCTGATTGTTCTTG+TGG | 0.449297 | 3.2:-58491097 | None:intergenic |
TTCTTTGGTTACACACTGCT+GGG | 0.455224 | 3.2:-58497084 | None:intergenic |
ACATTGTACGATTACATTCT+GGG | 0.456237 | 3.2:-58491027 | None:intergenic |
GAGCACGTTCCCATATGTTA+AGG | 0.459154 | 3.2:-58492052 | None:intergenic |
TGCTACCGTCAAACCTTCTC+AGG | 0.465275 | 3.2:+58495622 | MS.gene049586:CDS |
CATAGTGTGTTGGATGTGTT+AGG | 0.467513 | 3.2:+58496918 | MS.gene049586:CDS |
TCTTAGTATTAAGAAGTGTT+CGG | 0.468088 | 3.2:+58490838 | MS.gene049586:CDS |
ATCTGAGATGCAATTGAAAA+CGG | 0.473806 | 3.2:-58496573 | None:intergenic |
TTCTGATTGTTCTTGTGGCT+CGG | 0.476698 | 3.2:-58491092 | None:intergenic |
AATGTTGTGTGATATTGTTT+GGG | 0.481715 | 3.2:-58492446 | None:intergenic |
ATCATTCATACCTTGATCCA+TGG | 0.485606 | 3.2:-58490354 | None:intergenic |
GTCAAAAGTCTTCTCCAAGT+TGG | 0.489502 | 3.2:+58490451 | MS.gene049586:CDS |
TGATCCATGGGAACAATCCC+AGG | 0.490492 | 3.2:-58490341 | None:intergenic |
AAATGGATCTCAAAGTAAGC+TGG | 0.497107 | 3.2:-58490382 | None:intergenic |
CAACACTGTTGGCAATAACT+GGG | 0.497169 | 3.2:+58492253 | MS.gene049586:CDS |
ATCACAACTTTCAACTGTGA+TGG | 0.500775 | 3.2:-58490915 | None:intergenic |
GAGGCACTGTAATTGTGAAA+TGG | 0.502704 | 3.2:-58490399 | None:intergenic |
AACTTGAACTCAATAACTGC+AGG | 0.503626 | 3.2:+58492483 | MS.gene049586:CDS |
TTCTTCTTTGGTTGTCACAA+GGG | 0.506425 | 3.2:+58496725 | MS.gene049586:CDS |
ATTACATTATATTCCTGAGA+AGG | 0.507157 | 3.2:-58495635 | None:intergenic |
GAGAGCAAAGGCCACGATAG+TGG | 0.507230 | 3.2:+58495282 | MS.gene049586:CDS |
GCATCCCTTAAAAGAAATGA+AGG | 0.512863 | 3.2:-58496825 | None:intergenic |
AGGTGCTGAAGTTTCTGTCT+TGG | 0.515228 | 3.2:-58496013 | None:intergenic |
GAGACTCTCCAAAACAGCTT+CGG | 0.519316 | 3.2:-58497180 | None:intergenic |
TAAACTGTTCAGAGAGTCAA+AGG | 0.520089 | 3.2:-58490531 | None:intergenic |
GGACACATGCTGATTAAACT+TGG | 0.520994 | 3.2:-58492425 | None:intergenic |
GAGCTTTAGTACAACCAACT+TGG | 0.523462 | 3.2:-58490465 | None:intergenic |
CTAAAGAGTGTGTCATTGAA+AGG | 0.523542 | 3.2:+58490623 | MS.gene049586:CDS |
TGTCTTCCCAAAATTAAGAA+AGG | 0.524507 | 3.2:+58492280 | MS.gene049586:CDS |
TTCGATAAAGATTGGTTGGA+TGG | 0.530095 | 3.2:+58496993 | MS.gene049586:CDS |
GAAAGTAAGCTCGAATATTG+AGG | 0.531172 | 3.2:+58496548 | MS.gene049586:CDS |
TGGTTTCGATAAAGATTGGT+TGG | 0.531340 | 3.2:+58496989 | MS.gene049586:CDS |
TATAATGAGCAACGTCCACT+TGG | 0.531904 | 3.2:+58495590 | MS.gene049586:CDS |
TGTACTAAAGCTCGACAGAA+TGG | 0.532881 | 3.2:+58490475 | MS.gene049586:CDS |
AGATATTCTAATAGCCAAGA+GGG | 0.536495 | 3.2:-58497250 | None:intergenic |
ACTGTGATGGATTCTAGTGC+TGG | 0.537025 | 3.2:-58490902 | None:intergenic |
CAACAACATTCTTGGAGCAA+TGG | 0.537738 | 3.2:-58492165 | None:intergenic |
CCAACACACTATGGGTTTGG+AGG | 0.537807 | 3.2:-58496908 | None:intergenic |
GGGATTGTTCCCATGGATCA+AGG | 0.537833 | 3.2:+58490344 | MS.gene049586:CDS |
AGATCATGAGCATAGAGAAA+CGG | 0.538336 | 3.2:-58490878 | None:intergenic |
GCTGCTTTAAGTGCCCCTCT+TGG | 0.541688 | 3.2:+58497236 | MS.gene049586:CDS |
TTTGGCCAAGATGTCCAGCT+TGG | 0.543248 | 3.2:+58490953 | MS.gene049586:CDS |
TTACAAGATGTTCGCAGATG+TGG | 0.549714 | 3.2:+58496969 | MS.gene049586:CDS |
CATTTATTGCAGGAATTGAG+TGG | 0.553799 | 3.2:+58494191 | MS.gene049586:intron |
GATAATAACAGCACAAGTCA+AGG | 0.553831 | 3.2:+58490791 | MS.gene049586:CDS |
ATTTATTGCAGGAATTGAGT+GGG | 0.554762 | 3.2:+58494192 | MS.gene049586:intron |
TCTTGAGTTATCTCTACGCC+AGG | 0.556584 | 3.2:-58495466 | None:intergenic |
GTTCTTCTTTGGTTGTCACA+AGG | 0.556691 | 3.2:+58496724 | MS.gene049586:CDS |
TTCAGAGAGTCAAAGGAAAG+AGG | 0.557056 | 3.2:-58490524 | None:intergenic |
AGTTCATTATCTGTCTCTGA+TGG | 0.560308 | 3.2:-58495430 | None:intergenic |
TAACACATCCAACACACTAT+GGG | 0.560461 | 3.2:-58496916 | None:intergenic |
CCAATCTCTCCAACGACAGT+AGG | 0.562561 | 3.2:-58490691 | None:intergenic |
GAAGCAGAGGTTCTTAGACT+AGG | 0.563477 | 3.2:+58490287 | MS.gene049586:CDS |
CATACCTGGGATTGTTCCCA+TGG | 0.565611 | 3.2:+58490337 | MS.gene049586:CDS |
GAAACAGAGATATCAACATC+GGG | 0.567068 | 3.2:-58490649 | None:intergenic |
AACAATAAAATACCTTCAGA+AGG | 0.567414 | 3.2:-58496606 | None:intergenic |
ACATTCTTGGAGCAATGGAT+AGG | 0.572842 | 3.2:-58492160 | None:intergenic |
GGAGATCATGACAACACTGT+TGG | 0.573006 | 3.2:+58492242 | MS.gene049586:CDS |
GGTTGATCCTTAGAAAGCAA+TGG | 0.573909 | 3.2:-58491190 | None:intergenic |
GCATCTCCAGAAATGGAAGA+TGG | 0.574895 | 3.2:-58491067 | None:intergenic |
ATATTCCTGAGAAGGTTTGA+CGG | 0.576725 | 3.2:-58495627 | None:intergenic |
GTCGAAATAAGTGTTGAAGA+AGG | 0.579126 | 3.2:+58495973 | MS.gene049586:CDS |
ATTCCTTCAAAGCCTTCTGA+AGG | 0.579968 | 3.2:+58496594 | MS.gene049586:CDS |
TCATTCATACCTTGATCCAT+GGG | 0.579986 | 3.2:-58490353 | None:intergenic |
TAAAGATTGGTTGGATGGTG+TGG | 0.583005 | 3.2:+58496998 | MS.gene049586:CDS |
ATATTGCACAAGATATGTGA+TGG | 0.585415 | 3.2:-58492089 | None:intergenic |
AAATGCAATATATATTGTTG+TGG | 0.589892 | 3.2:+58491121 | MS.gene049586:CDS |
TGTCTTGGCATTAGCAGATG+CGG | 0.591144 | 3.2:-58495998 | None:intergenic |
CATAATAGATGAAAGAAAAG+GGG | 0.591738 | 3.2:+58490742 | MS.gene049586:CDS |
GCTTTCTAAGGATCAACCGC+AGG | 0.600299 | 3.2:+58491195 | MS.gene049586:CDS |
TGATGTTAGCCTACTGTCGT+TGG | 0.602978 | 3.2:+58490682 | MS.gene049586:CDS |
CTTAGACTAGGAAGAATCGA+GGG | 0.603883 | 3.2:+58490299 | MS.gene049586:CDS |
TTCACTAAGTAATAGATACA+AGG | 0.607781 | 3.2:+58496848 | MS.gene049586:CDS |
CCTCCAAACCCATAGTGTGT+TGG | 0.615763 | 3.2:+58496908 | MS.gene049586:CDS |
CACTGTGCTTAGTGTCAATG+AGG | 0.615852 | 3.2:-58490418 | None:intergenic |
CAGGGACGGTAAAATCATCA+AGG | 0.618571 | 3.2:+58492502 | MS.gene049586:CDS |
GAAATGAAGGATGCTTAACA+AGG | 0.624132 | 3.2:-58496812 | None:intergenic |
GTTACCACTAATGATGATGA+AGG | 0.626003 | 3.2:+58496406 | MS.gene049586:CDS |
AATTTGGAAGAATTGTGCAA+TGG | 0.628591 | 3.2:+58490500 | MS.gene049586:CDS |
AATAGATGAAAGAAAAGGGG+AGG | 0.628847 | 3.2:+58490745 | MS.gene049586:CDS |
TGGTATTGAAAATTCTCCAA+AGG | 0.633873 | 3.2:+58495302 | MS.gene049586:CDS |
ACTTGAACTCAATAACTGCA+GGG | 0.634739 | 3.2:+58492484 | MS.gene049586:CDS |
GAAGCACATTATAATAGACA+TGG | 0.635744 | 3.2:+58492220 | MS.gene049586:CDS |
GTATTGTATGCAAGAAGCAG+AGG | 0.638565 | 3.2:+58490274 | None:intergenic |
AAGATATTCTAATAGCCAAG+AGG | 0.641409 | 3.2:-58497251 | None:intergenic |
AGAAAAGGGGAGGAATCGAG+AGG | 0.641690 | 3.2:+58490755 | MS.gene049586:CDS |
GAACTCAATAACTGCAGGGA+CGG | 0.644494 | 3.2:+58492488 | MS.gene049586:CDS |
TGAAACAGAGATATCAACAT+CGG | 0.647089 | 3.2:-58490650 | None:intergenic |
AAGCACATTATAATAGACAT+GGG | 0.648129 | 3.2:+58492221 | MS.gene049586:CDS |
TCTTAGACTAGGAAGAATCG+AGG | 0.669449 | 3.2:+58490298 | MS.gene049586:CDS |
GTAGCATCAATTTCTCCAAG+TGG | 0.669767 | 3.2:-58495605 | None:intergenic |
CAATTACATGAAGAGAGCAA+AGG | 0.674437 | 3.2:+58495270 | MS.gene049586:CDS |
AACACTGTTGGCAATAACTG+GGG | 0.676567 | 3.2:+58492254 | MS.gene049586:CDS |
AATTGACCTAATGATGAATG+AGG | 0.678315 | 3.2:-58496033 | None:intergenic |
TGGCAGATTGTGAAGAACGA+AGG | 0.678446 | 3.2:-58492405 | None:intergenic |
GTTACCATTAAATTGTCCTG+CGG | 0.682827 | 3.2:-58491211 | None:intergenic |
GATATTCTAATAGCCAAGAG+GGG | 0.685829 | 3.2:-58497249 | None:intergenic |
AGATTGGAAATAAATGACTG+TGG | 0.685860 | 3.2:+58490707 | MS.gene049586:CDS |
TTAGACTAGGAAGAATCGAG+GGG | 0.696438 | 3.2:+58490300 | MS.gene049586:CDS |
ACAGATTGAGGAGTACCACA+AGG | 0.739952 | 3.2:+58491158 | MS.gene049586:CDS |
TAGACTAGGAAGAATCGAGG+GGG | 0.741535 | 3.2:+58490301 | MS.gene049586:CDS |
GATGAAGATGAATCTCAGTG+TGG | 0.742648 | 3.2:-58492367 | None:intergenic |
TTGATCCTTAGAAAGCAATG+GGG | 0.744604 | 3.2:-58491188 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 58490281 | 58497265 | 58490281 | ID=MS.gene049586 |
chr3.2 | mRNA | 58490281 | 58497265 | 58490281 | ID=MS.gene049586.t1;Parent=MS.gene049586 |
chr3.2 | exon | 58490281 | 58491228 | 58490281 | ID=MS.gene049586.t1.exon1;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58490281 | 58491228 | 58490281 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58492035 | 58492523 | 58492035 | ID=MS.gene049586.t1.exon2;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58492035 | 58492523 | 58492035 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58494203 | 58494275 | 58494203 | ID=MS.gene049586.t1.exon3;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58494203 | 58494275 | 58494203 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58495232 | 58495323 | 58495232 | ID=MS.gene049586.t1.exon4;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58495232 | 58495323 | 58495232 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58495415 | 58495489 | 58495415 | ID=MS.gene049586.t1.exon5;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58495415 | 58495489 | 58495415 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58495587 | 58495652 | 58495587 | ID=MS.gene049586.t1.exon6;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58495587 | 58495652 | 58495587 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58495970 | 58496083 | 58495970 | ID=MS.gene049586.t1.exon7;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58495970 | 58496083 | 58495970 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58496373 | 58496427 | 58496373 | ID=MS.gene049586.t1.exon8;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58496373 | 58496427 | 58496373 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58496523 | 58496615 | 58496523 | ID=MS.gene049586.t1.exon9;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58496523 | 58496615 | 58496523 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
chr3.2 | exon | 58496694 | 58497265 | 58496694 | ID=MS.gene049586.t1.exon10;Parent=MS.gene049586.t1 |
chr3.2 | CDS | 58496694 | 58497265 | 58496694 | ID=cds.MS.gene049586.t1;Parent=MS.gene049586.t1 |
Gene Sequence |
Protein sequence |