Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052378.t1 | XP_003625397.2 | 96.9 | 480 | 15 | 0 | 1 | 480 | 27 | 506 | 2.00E-268 | 934.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052378.t1 | Q8RY79 | 73.2 | 477 | 128 | 0 | 1 | 477 | 12 | 488 | 1.6e-210 | 733.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052378.t1 | G7KYF4 | 96.9 | 480 | 15 | 0 | 1 | 480 | 27 | 506 | 1.4e-268 | 934.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052169 | MS.gene052378 | 0.826841 | 2.17E-54 | -1.69E-46 |
| MS.gene052378 | MS.gene08402 | 0.808672 | 2.76E-50 | -1.69E-46 |
| MS.gene052378 | MS.gene23416 | 0.893778 | 4.58E-75 | -1.69E-46 |
| MS.gene052378 | MS.gene33912 | 0.804242 | 2.37E-49 | -1.69E-46 |
| MS.gene052378 | MS.gene48428 | 0.80317 | 3.96E-49 | -1.69E-46 |
| MS.gene052378 | MS.gene60041 | 0.811611 | 6.42E-51 | -1.69E-46 |
| MS.gene052378 | MS.gene68832 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene052378 | MS.gene75179 | 0.803246 | 3.82E-49 | -1.69E-46 |
| MS.gene052378 | MS.gene75365 | 0.800931 | 1.14E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052378.t1 | MTR_7g098730 | 96.875 | 480 | 15 | 0 | 1 | 480 | 27 | 506 | 0.0 | 964 |
| MS.gene052378.t1 | MTR_7g098700 | 93.542 | 480 | 31 | 0 | 1 | 480 | 53 | 532 | 0.0 | 932 |
| MS.gene052378.t1 | MTR_7g058700 | 55.040 | 496 | 205 | 3 | 1 | 478 | 4 | 499 | 0.0 | 582 |
| MS.gene052378.t1 | MTR_2g029430 | 52.827 | 513 | 207 | 3 | 1 | 478 | 4 | 516 | 0.0 | 569 |
| MS.gene052378.t1 | MTR_2g029450 | 52.827 | 513 | 207 | 3 | 1 | 478 | 4 | 516 | 0.0 | 569 |
| MS.gene052378.t1 | MTR_8g028060 | 54.141 | 495 | 192 | 5 | 1 | 477 | 20 | 497 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052378.t1 | AT2G20340 | 73.166 | 477 | 128 | 0 | 1 | 477 | 12 | 488 | 0.0 | 757 |
| MS.gene052378.t1 | AT2G20340 | 67.925 | 477 | 126 | 1 | 1 | 477 | 12 | 461 | 0.0 | 686 |
| MS.gene052378.t1 | AT4G28680 | 66.458 | 480 | 157 | 1 | 1 | 476 | 60 | 539 | 0.0 | 681 |
| MS.gene052378.t1 | AT4G28680 | 66.390 | 482 | 156 | 2 | 1 | 476 | 60 | 541 | 0.0 | 678 |
| MS.gene052378.t1 | AT4G28680 | 66.183 | 482 | 157 | 2 | 1 | 476 | 60 | 541 | 0.0 | 677 |
| MS.gene052378.t1 | AT4G28680 | 66.183 | 482 | 157 | 2 | 1 | 476 | 51 | 532 | 0.0 | 677 |
| MS.gene052378.t1 | AT4G28680 | 62.549 | 510 | 157 | 3 | 1 | 476 | 51 | 560 | 0.0 | 662 |
| MS.gene052378.t1 | AT4G28680 | 69.139 | 337 | 98 | 2 | 1 | 331 | 51 | 387 | 2.36e-173 | 494 |
| MS.gene052378.t1 | AT4G28680 | 69.497 | 318 | 91 | 2 | 1 | 312 | 51 | 368 | 1.23e-163 | 468 |
Find 102 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATATGCAAAATAATT+AGG | 0.126930 | 7.4:-11778690 | None:intergenic |
| AAAACATGTTGTAATGATTC+AGG | 0.217610 | 7.4:-11778025 | None:intergenic |
| TACGGTAGCACATAAGAAAA+AGG | 0.229362 | 7.4:-11779596 | None:intergenic |
| GACTTAATCCAGAGCTTTGC+AGG | 0.261975 | 7.4:+11779482 | MS.gene052378:CDS |
| TTAACATGAATGCACATAAA+TGG | 0.263676 | 7.4:+11780714 | MS.gene052378:CDS |
| TGCCATTATCTTCAGAGTTC+AGG | 0.285544 | 7.4:-11781950 | None:intergenic |
| ACTTCGACTGTTCAGTGCTT+TGG | 0.295923 | 7.4:+11780747 | MS.gene052378:CDS |
| CTGTTCAGTGCTTTGGGTTA+AGG | 0.296887 | 7.4:+11780754 | MS.gene052378:CDS |
| CCATCCAATAGTAGCATTGC+TGG | 0.305954 | 7.4:+11778711 | MS.gene052378:CDS |
| CTTCGACTGTTCAGTGCTTT+GGG | 0.316341 | 7.4:+11780748 | MS.gene052378:CDS |
| TCCAGTTCTTAGCCAAGTTC+AGG | 0.329752 | 7.4:+11777869 | MS.gene052378:CDS |
| TGCTCTATTAGAGAGTTTAT+AGG | 0.332521 | 7.4:+11782224 | MS.gene052378:CDS |
| GAAAATATGCAAAATAATTA+GGG | 0.352501 | 7.4:-11778689 | None:intergenic |
| AAAACCAGCAATGCTACTAT+TGG | 0.365257 | 7.4:-11778715 | None:intergenic |
| ATTGGTAGACAAACAACATT+TGG | 0.372666 | 7.4:+11780603 | MS.gene052378:intron |
| AAATATGTGCAGGTTCTATC+AGG | 0.375823 | 7.4:+11782111 | MS.gene052378:intron |
| TGGATGGTGATGCGACTCTA+TGG | 0.384269 | 7.4:+11781590 | MS.gene052378:CDS |
| TTTGTAAAGAAGAGTGTGTT+TGG | 0.402840 | 7.4:-11779184 | None:intergenic |
| AGCTGTACTAGTTGTATTGT+TGG | 0.403825 | 7.4:+11779091 | MS.gene052378:CDS |
| CTCAGTTGCTCAGCATCCAT+TGG | 0.409027 | 7.4:-11777786 | None:intergenic |
| CATGTGGATGCTGCTTATGC+TGG | 0.419701 | 7.4:+11780629 | MS.gene052378:CDS |
| CTCGATGCAGTAAATTCAAC+GGG | 0.432752 | 7.4:+11781993 | MS.gene052378:CDS |
| GTTTCTTGTTGTAGATGTAC+AGG | 0.433454 | 7.4:+11778632 | MS.gene052378:intron |
| ACCTGAACTTGGCTAAGAAC+TGG | 0.433619 | 7.4:-11777870 | None:intergenic |
| TTAAGCAACCTGCAAAGCTC+TGG | 0.434822 | 7.4:-11779490 | None:intergenic |
| ATGCGACTCTATGGATTAGA+AGG | 0.437596 | 7.4:+11781599 | MS.gene052378:CDS |
| GCCATTATCTTCAGAGTTCA+GGG | 0.442627 | 7.4:-11781949 | None:intergenic |
| ATTGCTTCAGAAAGTACATC+AGG | 0.443381 | 7.4:-11779544 | None:intergenic |
| AGTGCTGGTCTCAACATTGT+GGG | 0.444926 | 7.4:+11778753 | MS.gene052378:CDS |
| TCAATGAAGTGGCGGTACTC+TGG | 0.451337 | 7.4:-11780668 | None:intergenic |
| GATGCATACGTCACAAGCTT+AGG | 0.454688 | 7.4:-11779158 | None:intergenic |
| CCCCTGAACTCTGAAGATAA+TGG | 0.456710 | 7.4:+11781948 | MS.gene052378:CDS |
| GGATGAGTAGGAGCAGAATC+TGG | 0.480705 | 7.4:-11778004 | None:intergenic |
| TCAGTCGCTGTCTACAAATC+CGG | 0.481571 | 7.4:+11780902 | MS.gene052378:CDS |
| GCTTTGCAGGTTGCTTAAAA+CGG | 0.482137 | 7.4:+11779495 | MS.gene052378:CDS |
| TTAGGAGAGATGCTTAGTGC+TGG | 0.489284 | 7.4:+11778738 | MS.gene052378:CDS |
| TGGTCATAGATTACAAAGAT+TGG | 0.494250 | 7.4:+11781190 | MS.gene052378:CDS |
| TTGAATTTGCAGGCCTCTCA+AGG | 0.498341 | 7.4:+11781162 | MS.gene052378:intron |
| ATATGTATATTGCAGGGCAA+GGG | 0.499593 | 7.4:+11779039 | MS.gene052378:intron |
| TGGTCAAGACTCAAGGTTCA+AGG | 0.500593 | 7.4:+11781679 | MS.gene052378:CDS |
| CTGAACAGTCGAAGTTAGTA+AGG | 0.502263 | 7.4:-11780739 | None:intergenic |
| GAGTACCGCCACTTCATTGA+CGG | 0.503745 | 7.4:+11780671 | MS.gene052378:CDS |
| GTTTCGAGTTCAGTTGCAGC+AGG | 0.505363 | 7.4:-11778795 | None:intergenic |
| TATGACCATGTTTCCTTGAG+AGG | 0.517750 | 7.4:-11781175 | None:intergenic |
| AGGGGAAAGCGCAAAACTTG+TGG | 0.519943 | 7.4:-11779524 | None:intergenic |
| GACAAGATCCTGCAAAAGGT+TGG | 0.522548 | 7.4:+11779122 | MS.gene052378:CDS |
| CTACATTGGCGAAAGTCGCT+AGG | 0.525601 | 7.4:+11780218 | MS.gene052378:CDS |
| ATAGAAAGAGAACCTGAACT+TGG | 0.527971 | 7.4:-11777881 | None:intergenic |
| CCGTGACAAGATCCTGCAAA+AGG | 0.531362 | 7.4:+11779118 | MS.gene052378:CDS |
| TTACTGCATCGAGTAGATCA+TGG | 0.533227 | 7.4:-11781983 | None:intergenic |
| TCAACATTGTGGGATTCAGC+TGG | 0.534978 | 7.4:+11778763 | MS.gene052378:CDS |
| TAGTGCTGGTCTCAACATTG+TGG | 0.535988 | 7.4:+11778752 | MS.gene052378:CDS |
| AAAGATTGGCAAATTCCGCT+TGG | 0.536599 | 7.4:+11781204 | MS.gene052378:CDS |
| AAACAACATTTGGTTTCATG+TGG | 0.538678 | 7.4:+11780613 | MS.gene052378:CDS |
| CTTTGCCAATGTGTCACCCC+TGG | 0.538800 | 7.4:-11778666 | None:intergenic |
| TCGAAACGATTGTCCTCGAC+TGG | 0.546298 | 7.4:+11778811 | MS.gene052378:CDS |
| TGTTGATCCTCTGCCTACAT+TGG | 0.549550 | 7.4:+11780204 | MS.gene052378:CDS |
| AGCTTGTTGGTCAAGACTCA+AGG | 0.551024 | 7.4:+11781672 | MS.gene052378:CDS |
| CAGATCATTAAAACTGTGGA+TGG | 0.552349 | 7.4:+11781574 | MS.gene052378:intron |
| CCAGCAATGCTACTATTGGA+TGG | 0.552967 | 7.4:-11778711 | None:intergenic |
| CAAACTAAAGAGAATGTTCG+AGG | 0.559012 | 7.4:-11781909 | None:intergenic |
| CACCTAAAACGACGTCCAAG+CGG | 0.563542 | 7.4:-11781219 | None:intergenic |
| ATCAACAGCTGTTGATGAAG+TGG | 0.568304 | 7.4:-11780188 | None:intergenic |
| TACTACCAGGGGTGACACAT+TGG | 0.575038 | 7.4:+11778661 | MS.gene052378:CDS |
| TGTCCTCGACTGGCTTGCCA+AGG | 0.575415 | 7.4:+11778821 | MS.gene052378:CDS |
| AGATCCTGCAAAAGGTTGGA+AGG | 0.578086 | 7.4:+11779126 | MS.gene052378:CDS |
| GTGCCTTGGCAAGCCAGTCG+AGG | 0.578549 | 7.4:-11778824 | None:intergenic |
| TTCCACTAACCATACCTGGC+AGG | 0.580400 | 7.4:-11779210 | None:intergenic |
| TTGAGGCAGAAGGAGTGCCT+TGG | 0.581573 | 7.4:-11778838 | None:intergenic |
| ACTCGATGCAGTAAATTCAA+CGG | 0.582615 | 7.4:+11781992 | MS.gene052378:CDS |
| TGTAATGATTCAGGATGAGT+AGG | 0.583821 | 7.4:-11778016 | None:intergenic |
| AAAAGAAATCTTGAGGCAGA+AGG | 0.584604 | 7.4:-11778848 | None:intergenic |
| CTTCAACTCCGTCAATGAAG+TGG | 0.585468 | 7.4:-11780679 | None:intergenic |
| CATACGTCACAAGCTTAGGA+AGG | 0.585801 | 7.4:-11779154 | None:intergenic |
| TACATTGGCGAAAGTCGCTA+GGG | 0.587511 | 7.4:+11780219 | MS.gene052378:CDS |
| GTACAGGAAAAGATACTACC+AGG | 0.587605 | 7.4:+11778648 | MS.gene052378:CDS |
| GAGAGAGCAAGGTCATAAGA+TGG | 0.589776 | 7.4:+11777806 | MS.gene052378:CDS |
| TACATTCTACGTTTCGCAGT+AGG | 0.591077 | 7.4:+11782138 | MS.gene052378:CDS |
| ACATGCGTCACTTCTGTCAA+CGG | 0.592399 | 7.4:-11782165 | None:intergenic |
| GGTTTCTTATGTGAGTTCGC+AGG | 0.595345 | 7.4:-11781622 | None:intergenic |
| TATGTATATTGCAGGGCAAG+GGG | 0.603563 | 7.4:+11779040 | MS.gene052378:intron |
| GCTGAGCAACTGAGAGAGCA+AGG | 0.603666 | 7.4:+11777795 | MS.gene052378:CDS |
| GCAGGCCTCTCAAGGAAACA+TGG | 0.612434 | 7.4:+11781170 | MS.gene052378:intron |
| ACTTTCGCCAATGTAGGCAG+AGG | 0.614654 | 7.4:-11780211 | None:intergenic |
| TTGCTTCAGAAAGTACATCA+GGG | 0.615964 | 7.4:-11779543 | None:intergenic |
| CCATTATCTTCAGAGTTCAG+GGG | 0.617926 | 7.4:-11781948 | None:intergenic |
| CTAGCGACTTTCGCCAATGT+AGG | 0.622497 | 7.4:-11780217 | None:intergenic |
| CATAAGAAACCACATTGCAA+TGG | 0.646274 | 7.4:+11781634 | MS.gene052378:CDS |
| ATTTCAAATGACATTGCGAG+TGG | 0.648090 | 7.4:+11779565 | MS.gene052378:CDS |
| CCAGTTGAAAAGAAATCTTG+AGG | 0.651671 | 7.4:-11778855 | None:intergenic |
| TAAACTCTCTAATAGAGCAG+TGG | 0.652342 | 7.4:-11782220 | None:intergenic |
| TGCTTCAGAAAGTACATCAG+GGG | 0.653948 | 7.4:-11779542 | None:intergenic |
| ATGTATATTGCAGGGCAAGG+GGG | 0.662334 | 7.4:+11779041 | MS.gene052378:intron |
| TTATCTTCAGAGTTCAGGGG+AGG | 0.662860 | 7.4:-11781945 | None:intergenic |
| CAACTCCGTCAATGAAGTGG+CGG | 0.669512 | 7.4:-11780676 | None:intergenic |
| ATACGTCACAAGCTTAGGAA+GGG | 0.670528 | 7.4:-11779153 | None:intergenic |
| GCTCCAGATCATTAAAACTG+TGG | 0.675518 | 7.4:+11781570 | MS.gene052378:intron |
| TACAGGAAAAGATACTACCA+GGG | 0.676952 | 7.4:+11778649 | MS.gene052378:CDS |
| TGACGCATGTCAGTGCGGCG+TGG | 0.682187 | 7.4:+11782178 | MS.gene052378:CDS |
| AATAAGCAGCCATTGCAATG+TGG | 0.697849 | 7.4:-11781643 | None:intergenic |
| AGAAGTGACGCATGTCAGTG+CGG | 0.706512 | 7.4:+11782173 | MS.gene052378:CDS |
| ACAGGAAAAGATACTACCAG+GGG | 0.774613 | 7.4:+11778650 | MS.gene052378:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGTAAATGCATTTATA+CGG | + | chr7.4:11778464-11778483 | MS.gene052378:intron | 15.0% |
| !! | ATCATGATTATAATATTTCT+TGG | + | chr7.4:11781393-11781412 | MS.gene052378:intron | 15.0% |
| !! | ATTTATTAATCAGATGAAAA+TGG | - | chr7.4:11777907-11777926 | None:intergenic | 15.0% |
| !! | GAAAATATGCAAAATAATTA+GGG | - | chr7.4:11778692-11778711 | None:intergenic | 15.0% |
| !!! | AATTATCTTTTGATTTTCAT+TGG | + | chr7.4:11779449-11779468 | MS.gene052378:intron | 15.0% |
| !!! | TAATATTTCTTGGATTTTTA+TGG | + | chr7.4:11781403-11781422 | MS.gene052378:intron | 15.0% |
| !! | AAAAACAAATCTTATAGACA+TGG | + | chr7.4:11780432-11780451 | MS.gene052378:intron | 20.0% |
| !! | ACAAAATGGATAATAAACAT+TGG | + | chr7.4:11780009-11780028 | MS.gene052378:intron | 20.0% |
| !! | ACTAGTAAGATGAAATTAAA+AGG | - | chr7.4:11779734-11779753 | None:intergenic | 20.0% |
| !! | AGGCATATGAAATATTTATT+AGG | + | chr7.4:11778997-11779016 | MS.gene052378:intron | 20.0% |
| !! | ATATGAATCTTATAATTCCA+AGG | - | chr7.4:11781509-11781528 | None:intergenic | 20.0% |
| !! | CAAAATGGATAATAAACATT+GGG | + | chr7.4:11780010-11780029 | MS.gene052378:intron | 20.0% |
| !! | GAATTAATTATTCTAGCATT+TGG | + | chr7.4:11781342-11781361 | MS.gene052378:intron | 20.0% |
| !! | GACGTTTAGAAATATATTAT+GGG | - | chr7.4:11780782-11780801 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAATCGATATA+AGG | - | chr7.4:11779713-11779732 | None:intergenic | 20.0% |
| !! | GGAAAATATGCAAAATAATT+AGG | - | chr7.4:11778693-11778712 | None:intergenic | 20.0% |
| !! | TAAAATAACAATAGATCAGA+AGG | - | chr7.4:11779252-11779271 | None:intergenic | 20.0% |
| !! | TAATCATGATTACATCAAAA+TGG | - | chr7.4:11781383-11781402 | None:intergenic | 20.0% |
| !! | TATTGTAAATGCATTTATAC+GGG | + | chr7.4:11778465-11778484 | MS.gene052378:intron | 20.0% |
| !! | TGACGTTTAGAAATATATTA+TGG | - | chr7.4:11780783-11780802 | None:intergenic | 20.0% |
| !!! | AAACAATATCAATTTTCTGT+TGG | - | chr7.4:11780545-11780564 | None:intergenic | 20.0% |
| !!! | AAATATTTCATATGCCTTTT+GGG | - | chr7.4:11778994-11779013 | None:intergenic | 20.0% |
| !!! | ACATACTTCTTTTAACTATT+TGG | - | chr7.4:11780314-11780333 | None:intergenic | 20.0% |
| !!! | ATATTTTGAGTCATATATTG+AGG | + | chr7.4:11781047-11781066 | MS.gene052378:intron | 20.0% |
| !!! | CACATATTTTTTATCATCAA+CGG | - | chr7.4:11782100-11782119 | None:intergenic | 20.0% |
| !!! | GATTTGTTTTTATATTCCAT+AGG | - | chr7.4:11780423-11780442 | None:intergenic | 20.0% |
| !!! | TAAATATTTCATATGCCTTT+TGG | - | chr7.4:11778995-11779014 | None:intergenic | 20.0% |
| !!! | TCATTACAACATGTTTTAAA+TGG | + | chr7.4:11778031-11778050 | MS.gene052378:CDS | 20.0% |
| !!! | TTTCTTTGTTTAGTGTTTAT+GGG | + | chr7.4:11779845-11779864 | MS.gene052378:intron | 20.0% |
| ! | AAAACATGTTGTAATGATTC+AGG | - | chr7.4:11778028-11778047 | None:intergenic | 25.0% |
| ! | AAAATATCTTGATGTTCGTT+TGG | + | chr7.4:11778215-11778234 | MS.gene052378:intron | 25.0% |
| ! | AAATGACTTAGTTTAACAGT+TGG | - | chr7.4:11780463-11780482 | None:intergenic | 25.0% |
| ! | AATAAAAACACAAGAAGCAA+AGG | - | chr7.4:11778097-11778116 | None:intergenic | 25.0% |
| ! | AATCTGAAGATTGTACAAAA+TGG | + | chr7.4:11779995-11780014 | MS.gene052378:intron | 25.0% |
| ! | ACAATCTGATATTGTCTTAT+TGG | + | chr7.4:11780585-11780604 | MS.gene052378:intron | 25.0% |
| ! | ACTATGATATGTATATTGCA+GGG | + | chr7.4:11779033-11779052 | MS.gene052378:intron | 25.0% |
| ! | ATAAGACATGCATCATTATT+TGG | - | chr7.4:11781811-11781830 | None:intergenic | 25.0% |
| ! | ATCTAATCTCATCTAATCTA+AGG | - | chr7.4:11781467-11781486 | None:intergenic | 25.0% |
| ! | CAAATATACATGTTTGTATG+TGG | + | chr7.4:11781290-11781309 | MS.gene052378:intron | 25.0% |
| ! | CTTTATATTACCAAGAATTG+CGG | + | chr7.4:11778154-11778173 | MS.gene052378:intron | 25.0% |
| ! | GAATATCTGAAAAATAAGGT+AGG | + | chr7.4:11780924-11780943 | MS.gene052378:intron | 25.0% |
| ! | GAGTCTTAGATTTGAAAAAT+AGG | + | chr7.4:11779337-11779356 | MS.gene052378:intron | 25.0% |
| ! | TAAATCTCCATAATAGCTTA+TGG | + | chr7.4:11778364-11778383 | MS.gene052378:intron | 25.0% |
| ! | TACTATGATATGTATATTGC+AGG | + | chr7.4:11779032-11779051 | MS.gene052378:intron | 25.0% |
| ! | TGATGATAAAAAATATGTGC+AGG | + | chr7.4:11782101-11782120 | MS.gene052378:intron | 25.0% |
| ! | TTAACATGAATGCACATAAA+TGG | + | chr7.4:11780714-11780733 | MS.gene052378:CDS | 25.0% |
| ! | TTATCAACCAAATTCATTCA+TGG | - | chr7.4:11778962-11778981 | None:intergenic | 25.0% |
| ! | TTTCATCTTACTAGTAAGTT+TGG | + | chr7.4:11779739-11779758 | MS.gene052378:intron | 25.0% |
| !! | AAATGTTTTCATTACACACT+CGG | + | chr7.4:11782016-11782035 | MS.gene052378:CDS | 25.0% |
| !! | AATTAATTCAAGTTTCCAGT+AGG | - | chr7.4:11781331-11781350 | None:intergenic | 25.0% |
| !! | CATGACTTTTATTAAATCCT+TGG | + | chr7.4:11781489-11781508 | MS.gene052378:intron | 25.0% |
| !! | GTTTCTTTGTTTAGTGTTTA+TGG | + | chr7.4:11779844-11779863 | MS.gene052378:intron | 25.0% |
| !! | TCAGAAGACTTTTATTCTTA+CGG | - | chr7.4:11779617-11779636 | None:intergenic | 25.0% |
| !! | TTATGGATTTATGTATCGAT+TGG | + | chr7.4:11781420-11781439 | MS.gene052378:intron | 25.0% |
| !! | TTGAAAAATAGGTCTTTTCA+TGG | + | chr7.4:11779348-11779367 | MS.gene052378:intron | 25.0% |
| !!! | ACCTTATTTTTCAGATATTC+CGG | - | chr7.4:11780924-11780943 | None:intergenic | 25.0% |
| !!! | CATTCTCTTTAGTTTGTTTT+CGG | + | chr7.4:11781916-11781935 | MS.gene052378:CDS | 25.0% |
| !!! | GATAATTATTTCTGTGAGTT+TGG | + | chr7.4:11778888-11778907 | MS.gene052378:intron | 25.0% |
| !!! | TAAGCTGTTTTAAGCTAATT+TGG | + | chr7.4:11778339-11778358 | MS.gene052378:intron | 25.0% |
| AACAAGCTCTCTTATATTCA+TGG | + | chr7.4:11779311-11779330 | MS.gene052378:intron | 30.0% | |
| ACAAGCTCTCTTATATTCAT+GGG | + | chr7.4:11779312-11779331 | MS.gene052378:intron | 30.0% | |
| ATTATGCAATTTGTCCTAGA+AGG | - | chr7.4:11781712-11781731 | None:intergenic | 30.0% | |
| ATTGGTAGACAAACAACATT+TGG | + | chr7.4:11780603-11780622 | MS.gene052378:intron | 30.0% | |
| CCAAAAATAAAAACATCTGC+TGG | - | chr7.4:11778589-11778608 | None:intergenic | 30.0% | |
| CCATAATAGCTTATGGAAAT+AGG | + | chr7.4:11778371-11778390 | MS.gene052378:intron | 30.0% | |
| CCTATTTCCATAAGCTATTA+TGG | - | chr7.4:11778374-11778393 | None:intergenic | 30.0% | |
| GATAAAACTAAGAACCCAAA+AGG | + | chr7.4:11778977-11778996 | MS.gene052378:intron | 30.0% | |
| GGTAATATAAAGCGAGTTTA+TGG | - | chr7.4:11778146-11778165 | None:intergenic | 30.0% | |
| TACTACACCATGAATGAATT+TGG | + | chr7.4:11778952-11778971 | MS.gene052378:intron | 30.0% | |
| TCCGGAATATCTGAAAAATA+AGG | + | chr7.4:11780920-11780939 | MS.gene052378:CDS | 30.0% | |
| TGAGTATTCACATCAAATTG+AGG | + | chr7.4:11780108-11780127 | MS.gene052378:intron | 30.0% | |
| TGCAACAAAACTATATACAC+AGG | + | chr7.4:11781878-11781897 | MS.gene052378:intron | 30.0% | |
| TGCTCTATTAGAGAGTTTAT+AGG | + | chr7.4:11782224-11782243 | MS.gene052378:CDS | 30.0% | |
| TGGATTAATAAGCTCATGTT+AGG | - | chr7.4:11778557-11778576 | None:intergenic | 30.0% | |
| TGGTCATAGATTACAAAGAT+TGG | + | chr7.4:11781190-11781209 | MS.gene052378:CDS | 30.0% | |
| TTATCCCTTGATCTAATGAT+CGG | - | chr7.4:11779792-11779811 | None:intergenic | 30.0% | |
| TTCATTCATGGTGTAGTATA+AGG | - | chr7.4:11778950-11778969 | None:intergenic | 30.0% | |
| TTCTACCAACTAAAACTCTA+TGG | + | chr7.4:11780035-11780054 | MS.gene052378:intron | 30.0% | |
| ! | AAAAGAAGTATGTGACTCAT+AGG | + | chr7.4:11780321-11780340 | MS.gene052378:intron | 30.0% |
| ! | AAACAACATTTGGTTTCATG+TGG | + | chr7.4:11780613-11780632 | MS.gene052378:CDS | 30.0% |
| ! | AGATTTCTTTTCAACTGGTA+AGG | + | chr7.4:11778860-11778879 | MS.gene052378:intron | 30.0% |
| ! | ATGAGAAGTTTTCGAACTTT+TGG | + | chr7.4:11780987-11781006 | MS.gene052378:intron | 30.0% |
| ! | CTGTATTTCTTGTTGATGAA+TGG | + | chr7.4:11780076-11780095 | MS.gene052378:intron | 30.0% |
| ! | CTTGTCTAATTGTGTTCTTT+TGG | + | chr7.4:11781137-11781156 | MS.gene052378:intron | 30.0% |
| ! | GGTATGCATAAATTAACTTG+AGG | + | chr7.4:11782037-11782056 | MS.gene052378:intron | 30.0% |
| ! | TTTGTAAAGAAGAGTGTGTT+TGG | - | chr7.4:11779187-11779206 | None:intergenic | 30.0% |
| ! | TTTTCTGTTGGTCATTTCAT+AGG | - | chr7.4:11780533-11780552 | None:intergenic | 30.0% |
| !! | CATCAAAATGGATTAGAACT+AGG | - | chr7.4:11781371-11781390 | None:intergenic | 30.0% |
| !! | TCTTTTGGTATTGAATTTGC+AGG | + | chr7.4:11781152-11781171 | MS.gene052378:intron | 30.0% |
| !! | TTTGATTTTCATTGGCAGAT+AGG | + | chr7.4:11779457-11779476 | MS.gene052378:intron | 30.0% |
| !!! | CCAGCAGATGTTTTTATTTT+TGG | + | chr7.4:11778586-11778605 | MS.gene052378:intron | 30.0% |
| !!! | GTATCGATTGGTTTTTTATG+AGG | + | chr7.4:11781432-11781451 | MS.gene052378:intron | 30.0% |
| AAAACCAGCAATGCTACTAT+TGG | - | chr7.4:11778718-11778737 | None:intergenic | 35.0% | |
| AAAAGAAATCTTGAGGCAGA+AGG | - | chr7.4:11778851-11778870 | None:intergenic | 35.0% | |
| AAATATGTGCAGGTTCTATC+AGG | + | chr7.4:11782111-11782130 | MS.gene052378:intron | 35.0% | |
| ACGGAAAGAACATATTACGT+AGG | - | chr7.4:11782081-11782100 | None:intergenic | 35.0% | |
| ACGGTAGCACATAAGAAAAA+GGG | - | chr7.4:11779598-11779617 | None:intergenic | 35.0% | |
| ACTCGATGCAGTAAATTCAA+CGG | + | chr7.4:11781992-11782011 | MS.gene052378:CDS | 35.0% | |
| AGCTGTACTAGTTGTATTGT+TGG | + | chr7.4:11779091-11779110 | MS.gene052378:CDS | 35.0% | |
| AGTATAGTTTCACGACACTA+AGG | - | chr7.4:11779895-11779914 | None:intergenic | 35.0% | |
| ATAGAAAGAGAACCTGAACT+TGG | - | chr7.4:11777884-11777903 | None:intergenic | 35.0% | |
| ATATGTATATTGCAGGGCAA+GGG | + | chr7.4:11779039-11779058 | MS.gene052378:intron | 35.0% | |
| ATATTGATGCATGTCGATAC+AGG | + | chr7.4:11780863-11780882 | MS.gene052378:intron | 35.0% | |
| ATCTTGATGTTCGTTTGGAT+TGG | + | chr7.4:11778220-11778239 | MS.gene052378:intron | 35.0% | |
| ATTGAGGAACAGAGTCATTT+GGG | + | chr7.4:11781063-11781082 | MS.gene052378:intron | 35.0% | |
| ATTTCAAATGACATTGCGAG+TGG | + | chr7.4:11779565-11779584 | MS.gene052378:CDS | 35.0% | |
| CAAACTAAAGAGAATGTTCG+AGG | - | chr7.4:11781912-11781931 | None:intergenic | 35.0% | |
| CAAGCTCTCTTATATTCATG+GGG | + | chr7.4:11779313-11779332 | MS.gene052378:intron | 35.0% | |
| CAGATCATTAAAACTGTGGA+TGG | + | chr7.4:11781574-11781593 | MS.gene052378:intron | 35.0% | |
| CATAAGAAACCACATTGCAA+TGG | + | chr7.4:11781634-11781653 | MS.gene052378:CDS | 35.0% | |
| CCAGTTGAAAAGAAATCTTG+AGG | - | chr7.4:11778858-11778877 | None:intergenic | 35.0% | |
| CTTCTACAACAACATGAAGA+AGG | - | chr7.4:11779820-11779839 | None:intergenic | 35.0% | |
| GATCTTAAACTATGCATGCT+AGG | + | chr7.4:11779921-11779940 | MS.gene052378:intron | 35.0% | |
| GGTTAACACTTGCATGAAAA+TGG | + | chr7.4:11778392-11778411 | MS.gene052378:intron | 35.0% | |
| GTATTCACATCAAATTGAGG+TGG | + | chr7.4:11780111-11780130 | MS.gene052378:intron | 35.0% | |
| TAAACTCTCTAATAGAGCAG+TGG | - | chr7.4:11782223-11782242 | None:intergenic | 35.0% | |
| TACAGGAAAAGATACTACCA+GGG | + | chr7.4:11778649-11778668 | MS.gene052378:CDS | 35.0% | |
| TACGGTAGCACATAAGAAAA+AGG | - | chr7.4:11779599-11779618 | None:intergenic | 35.0% | |
| TACTACGTGTGTCATCTTAA+TGG | - | chr7.4:11779291-11779310 | None:intergenic | 35.0% | |
| TAGCGTAAAACTCTAATACC+AGG | - | chr7.4:11781756-11781775 | None:intergenic | 35.0% | |
| TATTCAAATCTCTCTCCTAC+TGG | + | chr7.4:11781313-11781332 | MS.gene052378:intron | 35.0% | |
| TATTGAGGAACAGAGTCATT+TGG | + | chr7.4:11781062-11781081 | MS.gene052378:intron | 35.0% | |
| TGTAATGATTCAGGATGAGT+AGG | - | chr7.4:11778019-11778038 | None:intergenic | 35.0% | |
| TTCACTACATTTATGCATGC+AGG | + | chr7.4:11780159-11780178 | MS.gene052378:intron | 35.0% | |
| TTTAACTGTCAGAGCTTAGA+TGG | - | chr7.4:11780495-11780514 | None:intergenic | 35.0% | |
| ! | ATTGCTTCAGAAAGTACATC+AGG | - | chr7.4:11779547-11779566 | None:intergenic | 35.0% |
| ! | CCTCAAGATTTCTTTTCAAC+TGG | + | chr7.4:11778855-11778874 | MS.gene052378:CDS | 35.0% |
| ! | GTTTCTTGTTGTAGATGTAC+AGG | + | chr7.4:11778632-11778651 | MS.gene052378:intron | 35.0% |
| ! | TGAGGTGGCTATTAACTTTT+CGG | + | chr7.4:11780126-11780145 | MS.gene052378:intron | 35.0% |
| ! | TGATCTTTCTTTGTGTTGCT+TGG | + | chr7.4:11779381-11779400 | MS.gene052378:intron | 35.0% |
| ! | TTCAAGGTATTCTTCCTTCT+AGG | + | chr7.4:11781695-11781714 | MS.gene052378:intron | 35.0% |
| ! | TTGCTTCAGAAAGTACATCA+GGG | - | chr7.4:11779546-11779565 | None:intergenic | 35.0% |
| !! | ACTGACCATAGAGTTTTAGT+TGG | - | chr7.4:11780043-11780062 | None:intergenic | 35.0% |
| !! | AGAAGCTTTTCAAGATAACC+TGG | - | chr7.4:11777983-11778002 | None:intergenic | 35.0% |
| !! | CATCCACAGTTTTAATGATC+TGG | - | chr7.4:11781576-11781595 | None:intergenic | 35.0% |
| !!! | AGTAGCATTGCTGGTTTTTT+AGG | + | chr7.4:11778720-11778739 | MS.gene052378:CDS | 35.0% |
| !!! | GTTTTAACTGTGTGTGAATG+TGG | + | chr7.4:11781017-11781036 | MS.gene052378:intron | 35.0% |
| AAAGATTGGCAAATTCCGCT+TGG | + | chr7.4:11781204-11781223 | MS.gene052378:CDS | 40.0% | |
| AAAGCTGCAACCATGATTTG+TGG | - | chr7.4:11778518-11778537 | None:intergenic | 40.0% | |
| AATAAGCAGCCATTGCAATG+TGG | - | chr7.4:11781646-11781665 | None:intergenic | 40.0% | |
| ACAGGAAAAGATACTACCAG+GGG | + | chr7.4:11778650-11778669 | MS.gene052378:CDS | 40.0% | |
| ACCATCCGATCATTAGATCA+AGG | + | chr7.4:11779784-11779803 | MS.gene052378:intron | 40.0% | |
| ATACGTCACAAGCTTAGGAA+GGG | - | chr7.4:11779156-11779175 | None:intergenic | 40.0% | |
| CCATCCGATCATTAGATCAA+GGG | + | chr7.4:11779785-11779804 | MS.gene052378:intron | 40.0% | |
| CCATTATCTTCAGAGTTCAG+GGG | - | chr7.4:11781951-11781970 | None:intergenic | 40.0% | |
| CGAGGAGATAACAATACCTA+TGG | + | chr7.4:11780404-11780423 | MS.gene052378:intron | 40.0% | |
| CTAAGTTTGACCGCAATTCT+TGG | - | chr7.4:11778167-11778186 | None:intergenic | 40.0% | |
| CTACATTTATGCATGCAGGT+TGG | + | chr7.4:11780163-11780182 | MS.gene052378:intron | 40.0% | |
| CTCGATGCAGTAAATTCAAC+GGG | + | chr7.4:11781993-11782012 | MS.gene052378:CDS | 40.0% | |
| CTGAACAGTCGAAGTTAGTA+AGG | - | chr7.4:11780742-11780761 | None:intergenic | 40.0% | |
| GATATGTATATTGCAGGGCA+AGG | + | chr7.4:11779038-11779057 | MS.gene052378:intron | 40.0% | |
| GCCATTATCTTCAGAGTTCA+GGG | - | chr7.4:11781952-11781971 | None:intergenic | 40.0% | |
| GCTCCAGATCATTAAAACTG+TGG | + | chr7.4:11781570-11781589 | MS.gene052378:intron | 40.0% | |
| GCTTCTGTTTACATGCTTGT+AGG | + | chr7.4:11780946-11780965 | MS.gene052378:intron | 40.0% | |
| GCTTTGCAGGTTGCTTAAAA+CGG | + | chr7.4:11779495-11779514 | MS.gene052378:CDS | 40.0% | |
| GTACAGGAAAAGATACTACC+AGG | + | chr7.4:11778648-11778667 | MS.gene052378:CDS | 40.0% | |
| GTATGTGACTCATAGGAACT+AGG | + | chr7.4:11780328-11780347 | MS.gene052378:intron | 40.0% | |
| TACATTCTACGTTTCGCAGT+AGG | + | chr7.4:11782138-11782157 | MS.gene052378:CDS | 40.0% | |
| TATGACCATGTTTCCTTGAG+AGG | - | chr7.4:11781178-11781197 | None:intergenic | 40.0% | |
| TATGTATATTGCAGGGCAAG+GGG | + | chr7.4:11779040-11779059 | MS.gene052378:intron | 40.0% | |
| TCATACGTACAACTGTAACC+TGG | + | chr7.4:11781735-11781754 | MS.gene052378:intron | 40.0% | |
| TGCCATTATCTTCAGAGTTC+AGG | - | chr7.4:11781953-11781972 | None:intergenic | 40.0% | |
| TGCCTCCTGTTTAAGAAACA+TGG | - | chr7.4:11781089-11781108 | None:intergenic | 40.0% | |
| TTACTGCATCGAGTAGATCA+TGG | - | chr7.4:11781986-11782005 | None:intergenic | 40.0% | |
| TTCTTTACAAAAAGCCTGCC+AGG | + | chr7.4:11779196-11779215 | MS.gene052378:CDS | 40.0% | |
| TTGGGCCATGTTTCTTAAAC+AGG | + | chr7.4:11781081-11781100 | MS.gene052378:intron | 40.0% | |
| ! | ATCAACAGCTGTTGATGAAG+TGG | - | chr7.4:11780191-11780210 | None:intergenic | 40.0% |
| ! | CTTTTCAACTGGTAAGGTCT+TGG | + | chr7.4:11778866-11778885 | MS.gene052378:intron | 40.0% |
| ! | GATGTTCGTTTGGATTGGAT+TGG | + | chr7.4:11778225-11778244 | MS.gene052378:intron | 40.0% |
| ! | GATTTTCATTGGCAGATAGG+AGG | + | chr7.4:11779460-11779479 | MS.gene052378:intron | 40.0% |
| ! | TGCTTCAGAAAGTACATCAG+GGG | - | chr7.4:11779545-11779564 | None:intergenic | 40.0% |
| !! | ATGCGACTCTATGGATTAGA+AGG | + | chr7.4:11781599-11781618 | MS.gene052378:CDS | 40.0% |
| !!! | GCTTATTTTGAGGAGCTTGT+TGG | + | chr7.4:11781659-11781678 | MS.gene052378:CDS | 40.0% |
| !!! | TGCAATGGCTGCTTATTTTG+AGG | + | chr7.4:11781649-11781668 | MS.gene052378:CDS | 40.0% |
| AAGATCAGAAACGACTCTGC+CGG | + | chr7.4:11780369-11780388 | MS.gene052378:intron | 45.0% | |
| ACATGCGTCACTTCTGTCAA+CGG | - | chr7.4:11782168-11782187 | None:intergenic | 45.0% | |
| ACCTGAACTTGGCTAAGAAC+TGG | - | chr7.4:11777873-11777892 | None:intergenic | 45.0% | |
| ACTTCGACTGTTCAGTGCTT+TGG | + | chr7.4:11780747-11780766 | MS.gene052378:CDS | 45.0% | |
| AGATCCTGCAAAAGGTTGGA+AGG | + | chr7.4:11779126-11779145 | MS.gene052378:CDS | 45.0% | |
| AGGCAAGGTTACACATGTGT+TGG | - | chr7.4:11781535-11781554 | None:intergenic | 45.0% | |
| ATGTATATTGCAGGGCAAGG+GGG | + | chr7.4:11779041-11779060 | MS.gene052378:intron | 45.0% | |
| CACGACACTAAGGTTGTTAC+CGG | - | chr7.4:11779885-11779904 | None:intergenic | 45.0% | |
| CATACGTCACAAGCTTAGGA+AGG | - | chr7.4:11779157-11779176 | None:intergenic | 45.0% | |
| CCAGCAATGCTACTATTGGA+TGG | - | chr7.4:11778714-11778733 | None:intergenic | 45.0% | |
| CCATCCAATAGTAGCATTGC+TGG | + | chr7.4:11778711-11778730 | MS.gene052378:CDS | 45.0% | |
| CCCTTGATCTAATGATCGGA+TGG | - | chr7.4:11779788-11779807 | None:intergenic | 45.0% | |
| CTCCTCGAGTTTCTAACTTC+CGG | - | chr7.4:11780391-11780410 | None:intergenic | 45.0% | |
| CTTCAACTCCGTCAATGAAG+TGG | - | chr7.4:11780682-11780701 | None:intergenic | 45.0% | |
| CTTCGACTGTTCAGTGCTTT+GGG | + | chr7.4:11780748-11780767 | MS.gene052378:CDS | 45.0% | |
| CTTGCCTGTTAACCTACACT+GGG | + | chr7.4:11781548-11781567 | MS.gene052378:intron | 45.0% | |
| GAAGTTCCACTAACCATACC+TGG | - | chr7.4:11779217-11779236 | None:intergenic | 45.0% | |
| GACAAGATCCTGCAAAAGGT+TGG | + | chr7.4:11779122-11779141 | MS.gene052378:CDS | 45.0% | |
| GACTTAATCCAGAGCTTTGC+AGG | + | chr7.4:11779482-11779501 | MS.gene052378:CDS | 45.0% | |
| GAGAGAGCAAGGTCATAAGA+TGG | + | chr7.4:11777806-11777825 | MS.gene052378:CDS | 45.0% | |
| GATGCATACGTCACAAGCTT+AGG | - | chr7.4:11779161-11779180 | None:intergenic | 45.0% | |
| GGCCATGTTTCTTAAACAGG+AGG | + | chr7.4:11781084-11781103 | MS.gene052378:intron | 45.0% | |
| GGTTTCTTATGTGAGTTCGC+AGG | - | chr7.4:11781625-11781644 | None:intergenic | 45.0% | |
| TACAAAAAGCCTGCCAGGTA+TGG | + | chr7.4:11779201-11779220 | MS.gene052378:intron | 45.0% | |
| TACATTGGCGAAAGTCGCTA+GGG | + | chr7.4:11780219-11780238 | MS.gene052378:CDS | 45.0% | |
| TCAACATTGTGGGATTCAGC+TGG | + | chr7.4:11778763-11778782 | MS.gene052378:CDS | 45.0% | |
| TCAGTCGCTGTCTACAAATC+CGG | + | chr7.4:11780902-11780921 | MS.gene052378:CDS | 45.0% | |
| TCCAAACGCACCACAAATCA+TGG | + | chr7.4:11778505-11778524 | MS.gene052378:intron | 45.0% | |
| TCCAGTTCTTAGCCAAGTTC+AGG | + | chr7.4:11777869-11777888 | MS.gene052378:CDS | 45.0% | |
| TGGTCAAGACTCAAGGTTCA+AGG | + | chr7.4:11781679-11781698 | MS.gene052378:CDS | 45.0% | |
| TGTTGATCCTCTGCCTACAT+TGG | + | chr7.4:11780204-11780223 | MS.gene052378:CDS | 45.0% | |
| TTAAGCAACCTGCAAAGCTC+TGG | - | chr7.4:11779493-11779512 | None:intergenic | 45.0% | |
| TTAGGAGAGATGCTTAGTGC+TGG | + | chr7.4:11778738-11778757 | MS.gene052378:CDS | 45.0% | |
| TTATCTTCAGAGTTCAGGGG+AGG | - | chr7.4:11781948-11781967 | None:intergenic | 45.0% | |
| TTGAATTTGCAGGCCTCTCA+AGG | + | chr7.4:11781162-11781181 | MS.gene052378:intron | 45.0% | |
| ! | ACATCTGCTGGTTAGAGAGA+TGG | - | chr7.4:11778577-11778596 | None:intergenic | 45.0% |
| ! | ACCATGATTTGTGGTGCGTT+TGG | - | chr7.4:11778509-11778528 | None:intergenic | 45.0% |
| ! | CATTCCTTCCAACCTTTTGC+AGG | - | chr7.4:11779133-11779152 | None:intergenic | 45.0% |
| ! | CCCCTGAACTCTGAAGATAA+TGG | + | chr7.4:11781948-11781967 | MS.gene052378:CDS | 45.0% |
| ! | CCTTTTGCAGGATCTTGTCA+CGG | - | chr7.4:11779121-11779140 | None:intergenic | 45.0% |
| ! | CTGTTCAGTGCTTTGGGTTA+AGG | + | chr7.4:11780754-11780773 | MS.gene052378:CDS | 45.0% |
| ! | CTTTTGCAGGATCTTGTCAC+GGG | - | chr7.4:11779120-11779139 | None:intergenic | 45.0% |
| !! | AGCTTGTTGGTCAAGACTCA+AGG | + | chr7.4:11781672-11781691 | MS.gene052378:CDS | 45.0% |
| !! | AGTGCTGGTCTCAACATTGT+GGG | + | chr7.4:11778753-11778772 | MS.gene052378:CDS | 45.0% |
| !! | CGTCGTTTTAGGTGTCTCTT+TGG | + | chr7.4:11781228-11781247 | MS.gene052378:intron | 45.0% |
| !! | TAGTGCTGGTCTCAACATTG+TGG | + | chr7.4:11778752-11778771 | MS.gene052378:CDS | 45.0% |
| AAGATAACCTGGCTGCAACG+AGG | - | chr7.4:11777972-11777991 | None:intergenic | 50.0% | |
| ACTTTCGCCAATGTAGGCAG+AGG | - | chr7.4:11780214-11780233 | None:intergenic | 50.0% | |
| AGAAGTGACGCATGTCAGTG+CGG | + | chr7.4:11782173-11782192 | MS.gene052378:CDS | 50.0% | |
| AGATAACCTGGCTGCAACGA+GGG | - | chr7.4:11777971-11777990 | None:intergenic | 50.0% | |
| CAACTCCGTCAATGAAGTGG+CGG | - | chr7.4:11780679-11780698 | None:intergenic | 50.0% | |
| CAAGGGGGTGGAGTTATACA+GGG | + | chr7.4:11779056-11779075 | MS.gene052378:CDS | 50.0% | |
| CACCTAAAACGACGTCCAAG+CGG | - | chr7.4:11781222-11781241 | None:intergenic | 50.0% | |
| CCAGTGTAGGTTAACAGGCA+AGG | - | chr7.4:11781550-11781569 | None:intergenic | 50.0% | |
| CCGTGACAAGATCCTGCAAA+AGG | + | chr7.4:11779118-11779137 | MS.gene052378:CDS | 50.0% | |
| CCTTGCCTGTTAACCTACAC+TGG | + | chr7.4:11781547-11781566 | MS.gene052378:intron | 50.0% | |
| CTACATTGGCGAAAGTCGCT+AGG | + | chr7.4:11780218-11780237 | MS.gene052378:CDS | 50.0% | |
| CTAGCGACTTTCGCCAATGT+AGG | - | chr7.4:11780220-11780239 | None:intergenic | 50.0% | |
| GGATGAGTAGGAGCAGAATC+TGG | - | chr7.4:11778007-11778026 | None:intergenic | 50.0% | |
| TACTACCAGGGGTGACACAT+TGG | + | chr7.4:11778661-11778680 | MS.gene052378:CDS | 50.0% | |
| TCAATGAAGTGGCGGTACTC+TGG | - | chr7.4:11780671-11780690 | None:intergenic | 50.0% | |
| TCGAAACGATTGTCCTCGAC+TGG | + | chr7.4:11778811-11778830 | MS.gene052378:CDS | 50.0% | |
| TGCCGGAAGTTAGAAACTCG+AGG | + | chr7.4:11780386-11780405 | MS.gene052378:intron | 50.0% | |
| TTCCACTAACCATACCTGGC+AGG | - | chr7.4:11779213-11779232 | None:intergenic | 50.0% | |
| ! | AATGATCTGGAGCCCAGTGT+AGG | - | chr7.4:11781563-11781582 | None:intergenic | 50.0% |
| ! | AGGGGAAAGCGCAAAACTTG+TGG | - | chr7.4:11779527-11779546 | None:intergenic | 50.0% |
| ! | CATGTGGATGCTGCTTATGC+TGG | + | chr7.4:11780629-11780648 | MS.gene052378:CDS | 50.0% |
| ! | GAGTACCGCCACTTCATTGA+CGG | + | chr7.4:11780671-11780690 | MS.gene052378:CDS | 50.0% |
| ! | TGGATGGTGATGCGACTCTA+TGG | + | chr7.4:11781590-11781609 | MS.gene052378:CDS | 50.0% |
| !! | GTTTCGAGTTCAGTTGCAGC+AGG | - | chr7.4:11778798-11778817 | None:intergenic | 50.0% |
| !! | TTCCGCTTGGACGTCGTTTT+AGG | + | chr7.4:11781217-11781236 | MS.gene052378:CDS | 50.0% |
| AGCCTGCCAGGTATGGTTAG+TGG | + | chr7.4:11779208-11779227 | MS.gene052378:intron | 55.0% | |
| ATGGGACACAGACGTCGTTC+CGG | + | chr7.4:11779863-11779882 | MS.gene052378:intron | 55.0% | |
| CTTTGCCAATGTGTCACCCC+TGG | - | chr7.4:11778669-11778688 | None:intergenic | 55.0% | |
| GCAAGGGGGTGGAGTTATAC+AGG | + | chr7.4:11779055-11779074 | MS.gene052378:CDS | 55.0% | |
| GCAGGCCTCTCAAGGAAACA+TGG | + | chr7.4:11781170-11781189 | MS.gene052378:intron | 55.0% | |
| GCTGAGCAACTGAGAGAGCA+AGG | + | chr7.4:11777795-11777814 | MS.gene052378:CDS | 55.0% | |
| GGAGCCCAGTGTAGGTTAAC+AGG | - | chr7.4:11781555-11781574 | None:intergenic | 55.0% | |
| TATATTGCAGGGCAAGGGGG+TGG | + | chr7.4:11779044-11779063 | MS.gene052378:intron | 55.0% | |
| ! | CATTTTCCCTCGTTGCAGCC+AGG | + | chr7.4:11777962-11777981 | MS.gene052378:intron | 55.0% |
| !! | TTGAGGCAGAAGGAGTGCCT+TGG | - | chr7.4:11778841-11778860 | None:intergenic | 55.0% |
| !! | TGTCCTCGACTGGCTTGCCA+AGG | + | chr7.4:11778821-11778840 | MS.gene052378:CDS | 60.0% |
| GTGCCTTGGCAAGCCAGTCG+AGG | - | chr7.4:11778827-11778846 | None:intergenic | 65.0% | |
| TGACGCATGTCAGTGCGGCG+TGG | + | chr7.4:11782178-11782197 | MS.gene052378:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 11777789 | 11782245 | 11777789 | ID=MS.gene052378 |
| chr7.4 | mRNA | 11777789 | 11782245 | 11777789 | ID=MS.gene052378.t1;Parent=MS.gene052378 |
| chr7.4 | exon | 11777789 | 11777890 | 11777789 | ID=MS.gene052378.t1.exon1;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11777789 | 11777890 | 11777789 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11777980 | 11778052 | 11777980 | ID=MS.gene052378.t1.exon2;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11777980 | 11778052 | 11777980 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11778646 | 11778876 | 11778646 | ID=MS.gene052378.t1.exon3;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11778646 | 11778876 | 11778646 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11779054 | 11779217 | 11779054 | ID=MS.gene052378.t1.exon4;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11779054 | 11779217 | 11779054 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11779475 | 11779615 | 11779475 | ID=MS.gene052378.t1.exon5;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11779475 | 11779615 | 11779475 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11780181 | 11780240 | 11780181 | ID=MS.gene052378.t1.exon6;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11780181 | 11780240 | 11780181 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11780611 | 11780775 | 11780611 | ID=MS.gene052378.t1.exon7;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11780611 | 11780775 | 11780611 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11780885 | 11780941 | 11780885 | ID=MS.gene052378.t1.exon8;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11780885 | 11780941 | 11780885 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11781174 | 11781238 | 11781174 | ID=MS.gene052378.t1.exon9;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11781174 | 11781238 | 11781174 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11781577 | 11781700 | 11781577 | ID=MS.gene052378.t1.exon10;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11781577 | 11781700 | 11781577 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11781900 | 11782037 | 11781900 | ID=MS.gene052378.t1.exon11;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11781900 | 11782037 | 11781900 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| chr7.4 | exon | 11782123 | 11782245 | 11782123 | ID=MS.gene052378.t1.exon12;Parent=MS.gene052378.t1 |
| chr7.4 | CDS | 11782123 | 11782245 | 11782123 | ID=cds.MS.gene052378.t1;Parent=MS.gene052378.t1 |
| Gene Sequence |
| Protein sequence |
