AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75365

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75365.t1 MTR_4g010650 98.886 808 9 0 1 808 1 808 0.0 1667
MS.gene75365.t1 MTR_2g103730 85.290 809 118 1 1 808 1 809 0.0 1454
MS.gene75365.t1 MTR_3g107360 64.140 831 266 11 1 808 1 822 0.0 1082
MS.gene75365.t1 MTR_3g107320 63.101 832 268 10 6 808 5 826 0.0 1065
MS.gene75365.t1 MTR_7g075910 46.424 825 388 17 6 796 299 1103 0.0 730
MS.gene75365.t1 MTR_8g033080 47.421 795 380 15 26 796 258 1038 0.0 724
MS.gene75365.t1 MTR_5g011050 47.724 769 365 14 50 796 90 843 0.0 722
MS.gene75365.t1 MTR_5g011060 45.543 819 399 17 6 796 38 837 0.0 715
MS.gene75365.t1 MTR_5g023050 45.963 805 371 14 50 808 86 872 0.0 706
MS.gene75365.t1 MTR_8g088690 47.595 790 364 16 50 808 72 842 0.0 706
MS.gene75365.t1 MTR_3g114840 46.801 797 368 19 50 808 73 851 0.0 694
MS.gene75365.t1 MTR_2g100250 42.222 810 403 19 6 808 5 756 0.0 613
MS.gene75365.t1 MTR_3g114840 45.788 736 335 19 50 738 73 791 0.0 602
MS.gene75365.t1 MTR_8g016160 40.814 811 399 21 6 808 8 745 0.0 572
MS.gene75365.t1 MTR_8g033080 46.735 582 279 11 26 589 258 826 5.36e-171 515
MS.gene75365.t1 MTR_1g083620 32.636 239 124 10 497 725 477 688 3.73e-21 99.8
MS.gene75365.t1 MTR_1g083620 28.270 237 110 9 211 426 127 324 1.08e-15 82.0
MS.gene75365.t1 MTR_1g083620 32.636 239 124 10 497 725 737 948 5.83e-21 99.4
MS.gene75365.t1 MTR_1g083620 28.692 237 109 10 211 426 387 584 7.86e-16 82.8
MS.gene75365.t1 MTR_5g023040 54.930 71 29 1 324 394 806 873 1.04e-18 91.7
MS.gene75365.t1 MTR_2g435560 30.924 249 132 9 456 692 600 820 2.28e-18 90.9
MS.gene75365.t1 MTR_2g435560 27.155 232 119 8 211 426 253 450 3.01e-15 80.9
MS.gene75365.t1 MTR_2g435560 30.924 249 132 9 456 692 735 955 3.39e-18 90.5
MS.gene75365.t1 MTR_2g435560 27.155 232 119 8 211 426 388 585 2.69e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75365.t1 AT3G15730 81.852 810 145 2 1 808 1 810 0.0 1422
MS.gene75365.t1 AT1G52570 81.481 810 148 2 1 808 1 810 0.0 1415
MS.gene75365.t1 AT1G52570 81.481 810 148 2 1 808 1 810 0.0 1415
MS.gene75365.t1 AT1G52570 81.481 810 148 2 1 808 1 810 0.0 1415
MS.gene75365.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1034
MS.gene75365.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1034
MS.gene75365.t1 AT5G25370 61.576 825 290 10 3 808 4 820 0.0 1034
MS.gene75365.t1 AT5G25370 64.334 743 257 6 72 808 5 745 0.0 999
MS.gene75365.t1 AT2G42010 45.388 824 395 17 6 796 271 1072 0.0 730
MS.gene75365.t1 AT2G42010 44.326 846 397 17 6 796 271 1097 0.0 723
MS.gene75365.t1 AT4G11840 45.157 826 404 15 6 796 44 855 0.0 716
MS.gene75365.t1 AT4G00240 45.386 791 394 14 26 796 144 916 0.0 715
MS.gene75365.t1 AT4G00240 46.415 767 378 13 50 796 11 764 0.0 715
MS.gene75365.t1 AT4G00240 46.415 767 378 13 50 796 128 881 0.0 714
MS.gene75365.t1 AT4G11830 44.928 828 403 15 6 796 34 845 0.0 714
MS.gene75365.t1 AT4G11830 46.323 775 372 13 50 796 55 813 0.0 713
MS.gene75365.t1 AT4G11850 45.200 823 404 16 6 796 40 847 0.0 702
MS.gene75365.t1 AT4G11840 44.606 825 380 15 6 796 44 825 0.0 694
MS.gene75365.t1 AT4G35790 46.491 798 368 17 50 808 80 857 0.0 677
MS.gene75365.t1 AT4G35790 46.106 809 366 18 50 808 80 868 0.0 670
MS.gene75365.t1 AT1G55180 40.678 767 402 17 50 808 19 740 0.0 586
MS.gene75365.t1 AT1G55180 39.286 812 427 18 5 808 9 762 0.0 586
MS.gene75365.t1 AT4G35790 46.242 612 282 12 50 626 80 679 1.12e-173 517
MS.gene75365.t1 AT4G11830 43.669 616 307 11 6 596 34 634 1.57e-169 504
MS.gene75365.t1 AT4G11830 43.907 599 296 11 6 579 34 617 5.15e-165 493
MS.gene75365.t1 AT3G05630 30.932 236 126 8 499 724 714 922 3.61e-20 96.7
MS.gene75365.t1 AT3G05630 27.329 322 155 14 131 426 304 572 2.95e-15 80.9
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.41e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.21e-15 82.0
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.41e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.21e-15 82.0
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.75e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.25e-15 82.0
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.79e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.17e-15 82.0
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.79e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.17e-15 82.0
MS.gene75365.t1 AT3G16785 32.283 254 122 11 456 692 710 930 3.83e-19 93.6
MS.gene75365.t1 AT3G16785 30.942 223 104 9 220 426 389 577 1.13e-15 82.4

Find 239 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGGTGGGTGGAAATTT+TGG 0.132980 4.2:+89728677 MS.gene75365:CDS
TTGATGGTGGGGCTGCTTTC+GGG 0.141624 4.2:+89729717 MS.gene75365:CDS
GCTTGAACCGATGCACTTTC+TGG 0.142366 4.2:-89730043 None:intergenic
GCAGCATCTTCAGGAGTTTC+TGG 0.186898 4.2:-89729743 None:intergenic
GCCACCAGAAAGTGGTATTT+TGG 0.188452 4.2:-89728898 None:intergenic
ATCGGTTGGTTTGTTGAAAA+AGG 0.188851 4.2:+89729142 MS.gene75365:CDS
CGTTCTTCTGCCTCGGTAAT+CGG 0.218124 4.2:+89730167 MS.gene75365:CDS
TCCATCCCCGGTAACATTTC+CGG 0.219913 4.2:+89729655 MS.gene75365:CDS
ATTGATGGTGGGGCTGCTTT+CGG 0.239201 4.2:+89729716 MS.gene75365:CDS
TCGCTCCGTCCATTGATCTT+TGG 0.259842 4.2:-89730464 None:intergenic
ATCCCCAAAATACCACTTTC+TGG 0.262299 4.2:+89728894 MS.gene75365:CDS
TTTCCTTGGTGAGGGATTCT+AGG 0.266899 4.2:+89729021 MS.gene75365:CDS
ACCAGATTGCTGACAAATAT+TGG 0.280067 4.2:+89730655 MS.gene75365:CDS
AGGATTTACTTGTCTCTCTA+AGG 0.282625 4.2:+89729609 MS.gene75365:CDS
CCAGCTCTCGCAGCATCTTC+AGG 0.308289 4.2:-89729752 None:intergenic
AAAAGTCTAGTGAAGGTGTT+AGG 0.315711 4.2:+89729090 MS.gene75365:CDS
ACTCTATGCTACCATTGATT+TGG 0.326580 4.2:+89728458 MS.gene75365:CDS
CCTGTTGGAGCAACTTTAAT+CGG 0.329996 4.2:+89728609 MS.gene75365:CDS
TCACTTGAGCACGACCTTCC+TGG 0.343592 4.2:+89730696 MS.gene75365:CDS
CTTGAACCGATGCACTTTCT+GGG 0.343605 4.2:-89730042 None:intergenic
GTGAAAAGACTCGTACCATT+TGG 0.347746 4.2:-89728532 None:intergenic
ATCTTAAGTGAAAGTTCCTT+TGG 0.350014 4.2:-89729950 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 4.2:-89730656 None:intergenic
ATCCCTCACCAAGGAAATTT+CGG 0.354270 4.2:-89729015 None:intergenic
TTTCATCAACCTAACTTTCC+AGG 0.354896 4.2:+89729464 MS.gene75365:CDS
GACACCAAGGCTCGGATTCT+CGG 0.360309 4.2:+89730795 MS.gene75365:CDS
ACCACCATCATCAGGATTGC+GGG 0.363530 4.2:-89729240 None:intergenic
TGCATCGGTTCAAGCAATAT+TGG 0.369787 4.2:+89730051 MS.gene75365:CDS
CTCTGTGAGAAGAAAGTATA+CGG 0.369951 4.2:-89728819 None:intergenic
TCACATTTACTGTGCTCATA+TGG 0.370819 4.2:+89728551 MS.gene75365:CDS
TGAAAAGACTCGTACCATTT+GGG 0.379443 4.2:-89728531 None:intergenic
CCGATTAAAGTTGCTCCAAC+AGG 0.380987 4.2:-89728609 None:intergenic
TCGTAATCTGAATCAGGTTC+TGG 0.383287 4.2:-89730229 None:intergenic
TTCTAGGAGGCCAAAGGCTG+GGG 0.387473 4.2:+89729037 MS.gene75365:CDS
GCCTTGAAGGACCGATCGCT+TGG 0.387667 4.2:+89729540 MS.gene75365:CDS
CTGGCTGTCTTGCAGCTAAA+TGG 0.393197 4.2:-89730524 None:intergenic
ATTGAGGAAACTGTTGGTCT+TGG 0.395386 4.2:+89728420 MS.gene75365:CDS
TGTCCACAACCACAATCTTC+TGG 0.398916 4.2:-89729307 None:intergenic
ATGTCACGAAAGACCGCAGC+TGG 0.399882 4.2:+89728760 MS.gene75365:CDS
AGAATCCGAGCCTTGGTGTC+GGG 0.406985 4.2:-89730792 None:intergenic
GTTCTTCTGCCTCGGTAATC+GGG 0.408625 4.2:+89730168 MS.gene75365:CDS
CAGCATCTTCAGGAGTTTCT+GGG 0.410189 4.2:-89729742 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 4.2:-89729920 None:intergenic
ATTGCAGCACCTGGAAAGTT+AGG 0.413190 4.2:-89729473 None:intergenic
AAACTTACCTATCATCATCT+TGG 0.413744 4.2:-89730293 None:intergenic
TGATGGTGGTAGCATCATTC+AGG 0.414188 4.2:+89729253 MS.gene75365:CDS
CCTGAAGATGCTGCGAGAGC+TGG 0.415758 4.2:+89729752 MS.gene75365:CDS
ATTCAAAGCGCTAAATTTCC+TGG 0.415896 4.2:+89728792 MS.gene75365:CDS
ATGGCACAAATTCATCTTCA+TGG 0.419518 4.2:+89727307 MS.gene75365:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 4.2:+89730656 MS.gene75365:CDS
CAGCTGTTTAGATCTATTGA+TGG 0.419716 4.2:+89729701 MS.gene75365:CDS
TGATCATCCGGAAATGTTAC+CGG 0.420713 4.2:-89729662 None:intergenic
CAGCAATCTGGTTCACCTTA+CGG 0.421232 4.2:-89730644 None:intergenic
GGGACACCCTCTGGCCACAT+TGG 0.421738 4.2:-89730022 None:intergenic
GGACACCCTCTGGCCACATT+GGG 0.423065 4.2:-89730021 None:intergenic
ATTGAAAATCAGTATTTCCT+TGG 0.426891 4.2:+89729863 MS.gene75365:CDS
ATGCATATATTAATGCTATT+CGG 0.428019 4.2:+89729819 MS.gene75365:CDS
CATGAAACGTCGGGACTGTT+GGG 0.428061 4.2:-89730257 None:intergenic
GATGTACAAGGATATCGTTC+TGG 0.435578 4.2:+89730099 MS.gene75365:CDS
GTTCATACCAAGATGATGAT+AGG 0.435880 4.2:+89730286 MS.gene75365:CDS
TCTTCGAACCCTCTTGTATC+GGG 0.436117 4.2:-89728713 None:intergenic
TGAATCAGGTTCTGGTTGTT+CGG 0.437834 4.2:-89730221 None:intergenic
TCCGGAAATGTTACCGGGGA+TGG 0.438701 4.2:-89729656 None:intergenic
AGCTAAATGGTAGGGCTGAT+AGG 0.439308 4.2:-89730511 None:intergenic
TTCCATGTCTCGTGATCATC+CGG 0.441115 4.2:-89729674 None:intergenic
TCTTAAGTGAAAGTTCCTTT+GGG 0.441263 4.2:-89729949 None:intergenic
CGCTTATCCGACCCTCCACC+AGG 0.441994 4.2:-89729338 None:intergenic
TGTTTAGATCTATTGATGGT+GGG 0.446034 4.2:+89729705 MS.gene75365:CDS
TCATGAAACGTCGGGACTGT+TGG 0.446105 4.2:-89730258 None:intergenic
CTGTCTTGCAGCTAAATGGT+AGG 0.447434 4.2:-89730520 None:intergenic
GACATTCATTCCCGCCTTGA+AGG 0.449178 4.2:+89729527 MS.gene75365:CDS
ATCTTCGAACCCTCTTGTAT+CGG 0.455754 4.2:-89728714 None:intergenic
AAACACATGATATACATTAC+CGG 0.460467 4.2:+89728978 MS.gene75365:CDS
GCACTTTCTGGGACACCCTC+TGG 0.462871 4.2:-89730031 None:intergenic
AAAGTCTAGTGAAGGTGTTA+GGG 0.463222 4.2:+89729091 MS.gene75365:CDS
GAAACCGCACAGTTCTTTGA+AGG 0.467829 4.2:+89729191 MS.gene75365:CDS
GATTCTAGGAGGCCAAAGGC+TGG 0.467985 4.2:+89729035 MS.gene75365:CDS
GCCGCCGAGAATCCGAGCCT+TGG 0.470752 4.2:-89730799 None:intergenic
TGTTTATACCGAAATTTCCT+TGG 0.471207 4.2:+89729007 MS.gene75365:CDS
TATCCGGCACATGAGAATCT+TGG 0.471426 4.2:-89728866 None:intergenic
GCGAGAGCTGGGCTTATTAG+TGG 0.471776 4.2:+89729764 MS.gene75365:CDS
CACTTGCTTCGCTATCCGAT+TGG 0.472419 4.2:+89730720 MS.gene75365:CDS
TCACCAGAAGATTGTGGTTG+TGG 0.472585 4.2:+89729304 MS.gene75365:CDS
GCTCTCTCGTAATCTGAATC+AGG 0.473696 4.2:-89730235 None:intergenic
TTCGGTATAAACAGACCAAC+CGG 0.477585 4.2:-89728997 None:intergenic
ATTCTAGGAGGCCAAAGGCT+GGG 0.483116 4.2:+89729036 MS.gene75365:CDS
CTGAAGATGCTGCGAGAGCT+GGG 0.483144 4.2:+89729753 MS.gene75365:CDS
TTATGAGCCTCATCGGTGTT+GGG 0.483969 4.2:+89728926 MS.gene75365:CDS
AACTAAGTAGTAAGGATAGG+AGG 0.484222 4.2:-89730837 None:intergenic
CCTTGAAGGACCGATCGCTT+GGG 0.484290 4.2:+89729541 MS.gene75365:CDS
CTCACAGAGGAAAGGATGTA+AGG 0.488198 4.2:+89728833 MS.gene75365:CDS
CTTATGAGCCTCATCGGTGT+TGG 0.488671 4.2:+89728925 MS.gene75365:CDS
CCCAAGCGATCGGTCCTTCA+AGG 0.490151 4.2:-89729541 None:intergenic
TTACCAAGATTCTCATGTGC+CGG 0.490601 4.2:+89728863 MS.gene75365:CDS
GGAGATGTCACACAGCTGCC+TGG 0.492596 4.2:+89730756 MS.gene75365:CDS
CCAGGTGCTGCAATCACAAA+AGG 0.496013 4.2:+89729482 MS.gene75365:CDS
CCATTCAAGACCTCCTCGAC+AGG 0.496478 4.2:-89728645 None:intergenic
CATTGATCTTTGGTTGATGT+TGG 0.498653 4.2:-89730454 None:intergenic
AGGATATCGTTCTGGCACTC+AGG 0.498950 4.2:+89730107 MS.gene75365:CDS
TACCGAAATTTCCTTGGTGA+GGG 0.498969 4.2:+89729013 MS.gene75365:CDS
TTCTATTATTCCTCCATCCC+CGG 0.504693 4.2:+89729643 MS.gene75365:CDS
TCAGGTTCTGGTTGTTCGGA+AGG 0.504977 4.2:-89730217 None:intergenic
CTGTTTAGATCTATTGATGG+TGG 0.506397 4.2:+89729704 MS.gene75365:CDS
ATTATGAGTAAGATTGAAGC+CGG 0.506694 4.2:+89729971 MS.gene75365:CDS
CAATCACAAAAGGCGGTCCA+AGG 0.512335 4.2:+89729492 MS.gene75365:CDS
CGTTCTGGCACTCAGGGCAA+AGG 0.513948 4.2:+89730114 MS.gene75365:CDS
CCTTCACTAGCAACTCCAAT+CGG 0.513962 4.2:-89730735 None:intergenic
ATGATGCTACCACCATCATC+AGG 0.514375 4.2:-89729248 None:intergenic
GAAACTGTTGGTCTTGGAAA+GGG 0.514436 4.2:+89728426 MS.gene75365:CDS
GATCATCCGGAAATGTTACC+GGG 0.516686 4.2:-89729661 None:intergenic
AAGCTTAATGCTGGTGGTGG+AGG 0.521498 4.2:+89727361 MS.gene75365:CDS
TGGTGAGGAAATTGATAGGT+GGG 0.528326 4.2:+89728665 MS.gene75365:CDS
AAGCAATATTGGACTGGCAG+AGG 0.531832 4.2:+89730062 MS.gene75365:CDS
AACATAGATCATGAAACGTC+GGG 0.533395 4.2:-89730266 None:intergenic
ATGTCATGCCAAGGTTCCCT+TGG 0.535392 4.2:-89729509 None:intergenic
AGCGATCGGTCCTTCAAGGC+GGG 0.535565 4.2:-89729537 None:intergenic
GAGAATCCGAGCCTTGGTGT+CGG 0.538506 4.2:-89730793 None:intergenic
TCCAAGCAAAAGAGCTTCCA+AGG 0.539099 4.2:-89729880 None:intergenic
TAAGTCTTGCCACCAGAAAG+TGG 0.539707 4.2:-89728906 None:intergenic
CCATGGACTTGACCACGTGC+TGG 0.539957 4.2:-89730543 None:intergenic
TATTTGACGTTCTTCTGCCT+CGG 0.540130 4.2:+89730160 MS.gene75365:CDS
AAGAAAGTATACGGAACTCC+AGG 0.540377 4.2:-89728810 None:intergenic
GTTTAGATCTATTGATGGTG+GGG 0.540703 4.2:+89729706 MS.gene75365:CDS
CAAAATATTGCAGCTTCACA+TGG 0.543780 4.2:-89728737 None:intergenic
TCTTGCCTTCTCCAAATCAA+TGG 0.546831 4.2:-89728469 None:intergenic
ACTAAGTAGTAAGGATAGGA+GGG 0.550130 4.2:-89730836 None:intergenic
CCAAACTAAGTAGTAAGGAT+AGG 0.550288 4.2:-89730840 None:intergenic
TGATTTGGAGAAGGCAAGAG+TGG 0.552030 4.2:+89728473 MS.gene75365:CDS
AAGGCGGTCCAAGGGAACCT+TGG 0.552221 4.2:+89729501 MS.gene75365:CDS
GTGAAAGATGATAATCCTGT+TGG 0.552822 4.2:+89728594 MS.gene75365:CDS
CCAGCACGTGGTCAAGTCCA+TGG 0.552842 4.2:+89730543 MS.gene75365:CDS
ATGAGCATACTAATCCCAAA+TGG 0.553693 4.2:+89728517 MS.gene75365:CDS
GTTCTGGCACTCAGGGCAAA+GGG 0.553846 4.2:+89730115 MS.gene75365:CDS
TGCTACCATTGATTTGGAGA+AGG 0.554396 4.2:+89728464 MS.gene75365:CDS
GGATTTACTTGTCTCTCTAA+GGG 0.554563 4.2:+89729610 MS.gene75365:CDS
CAAAACATTGAGGAAACTGT+TGG 0.557099 4.2:+89728414 MS.gene75365:CDS
GGAAACTGTTGGTCTTGGAA+AGG 0.558000 4.2:+89728425 MS.gene75365:CDS
CAACATCAACCAAAGATCAA+TGG 0.560182 4.2:+89730455 MS.gene75365:CDS
TGAATGGTGAGGAAATTGAT+AGG 0.560352 4.2:+89728661 MS.gene75365:CDS
TTCCGGATGATCACGAGACA+TGG 0.561317 4.2:+89729672 MS.gene75365:CDS
GATATTAAGCCTGAAGACAT+TGG 0.562253 4.2:+89729911 MS.gene75365:CDS
GACAGTGAATTACCTGGTGG+AGG 0.562424 4.2:+89729326 MS.gene75365:CDS
TCTTCATGCTACTATCTATG+AGG 0.563357 4.2:+89727333 MS.gene75365:CDS
GATGACGAATACATAATCGT+TGG 0.564804 4.2:+89730426 MS.gene75365:CDS
ATACCGAAATTTCCTTGGTG+AGG 0.565309 4.2:+89729012 MS.gene75365:CDS
AACGATGGAGGAAGCAAGGT+GGG 0.565356 4.2:+89729585 MS.gene75365:CDS
AAAGACCGCAGCTGGGCTCG+AGG 0.565566 4.2:+89728768 MS.gene75365:CDS
GGATATCGTTCTGGCACTCA+GGG 0.565745 4.2:+89730108 MS.gene75365:CDS
CGGTTCAAGCAATATTGGAC+TGG 0.566255 4.2:+89730056 MS.gene75365:CDS
TTATGAGTAAGATTGAAGCC+GGG 0.567721 4.2:+89729972 MS.gene75365:CDS
TGGGATGATAGAACATCGGT+TGG 0.573109 4.2:+89729128 MS.gene75365:CDS
TGTCTTGCAGCTAAATGGTA+GGG 0.573776 4.2:-89730519 None:intergenic
ACTTTCTTCTCACAGAGGAA+AGG 0.574250 4.2:+89728825 MS.gene75365:CDS
TACTCATCACCAGAAGATTG+TGG 0.574698 4.2:+89729298 MS.gene75365:CDS
GAATGCCTCGAGCCCAGCTG+CGG 0.576491 4.2:-89728773 None:intergenic
GGATAGCGAAGCAAGTGTCC+AGG 0.581630 4.2:-89730714 None:intergenic
CCTGTCGAGGAGGTCTTGAA+TGG 0.582151 4.2:+89728645 MS.gene75365:CDS
AGCTGGGCTTATTAGTGGAA+AGG 0.583055 4.2:+89729769 MS.gene75365:CDS
TGCTTTGCATCTCATCCCAA+AGG 0.583132 4.2:+89729934 MS.gene75365:CDS
GAATCCGAGCCTTGGTGTCG+GGG 0.583277 4.2:-89730791 None:intergenic
GCAAGACTTATGAGCCTCAT+CGG 0.583714 4.2:+89728919 MS.gene75365:CDS
TAGGTTGATGAAAATCATCA+TGG 0.587769 4.2:-89729454 None:intergenic
ACAGATCAGGCAAAACATTG+AGG 0.589416 4.2:+89728404 MS.gene75365:intron
AAGTAGTAAGGATAGGAGGG+AGG 0.592783 4.2:-89730833 None:intergenic
AAAGATCAATGGACGGAGCG+AGG 0.593749 4.2:+89730466 MS.gene75365:CDS
CCACCATCATCAGGATTGCG+GGG 0.594046 4.2:-89729239 None:intergenic
GAGGGACTCTGAGATAGCGA+TGG 0.594266 4.2:+89730485 MS.gene75365:CDS
ATGGAGGAAGCAAGGTGGGA+AGG 0.595810 4.2:+89729589 MS.gene75365:CDS
TACCACCATCATCAGGATTG+CGG 0.597814 4.2:-89729241 None:intergenic
GGAAATGTTACCGGGGATGG+AGG 0.599535 4.2:-89729653 None:intergenic
AGGGACTCTGAGATAGCGAT+GGG 0.600455 4.2:+89730486 MS.gene75365:CDS
GATAAGCTTAATGCTGGTGG+TGG 0.603160 4.2:+89727358 MS.gene75365:CDS
GAGGTTGATAAGCTTAATGC+TGG 0.603431 4.2:+89727352 MS.gene75365:CDS
AAATCAAGAATGTATCCGTA+AGG 0.604233 4.2:+89730629 MS.gene75365:CDS
ACATGATATACATTACCGGT+TGG 0.606826 4.2:+89728982 MS.gene75365:CDS
CATCATGGTGTGCTGTGTCG+AGG 0.610829 4.2:-89729439 None:intergenic
CCGATTGGAGTTGCTAGTGA+AGG 0.611060 4.2:+89730735 MS.gene75365:CDS
ATCATGGTGTGCTGTGTCGA+GGG 0.611472 4.2:-89729438 None:intergenic
TATGAGTAAGATTGAAGCCG+GGG 0.612358 4.2:+89729973 MS.gene75365:CDS
CCTTGGTGAGGGATTCTAGG+AGG 0.613168 4.2:+89729024 MS.gene75365:CDS
AAGATCAATGGACGGAGCGA+GGG 0.613208 4.2:+89730467 MS.gene75365:CDS
TGTTTAACTTTGAGCAACGA+TGG 0.613445 4.2:+89729570 MS.gene75365:CDS
CGGGAATGAATGTCATGCCA+AGG 0.614171 4.2:-89729518 None:intergenic
AACAACACATCCCAAGCGAT+CGG 0.615121 4.2:-89729551 None:intergenic
GATTTGGAGAAGGCAAGAGT+GGG 0.615789 4.2:+89728474 MS.gene75365:CDS
AATCACAAAAGGCGGTCCAA+GGG 0.616469 4.2:+89729493 MS.gene75365:CDS
TGAATTACCTGGTGGAGGGT+CGG 0.616742 4.2:+89729331 MS.gene75365:CDS
GAGCAACGATGGAGGAAGCA+AGG 0.617826 4.2:+89729581 MS.gene75365:CDS
TGGAGAAGGCAAGAGTGGGA+AGG 0.621315 4.2:+89728478 MS.gene75365:CDS
TGGAGGAAATTTCCTCAGCA+TGG 0.621349 4.2:+89727378 MS.gene75365:CDS
AGGGAATCGAGGAAGATCCT+CGG 0.622355 4.2:+89730134 MS.gene75365:CDS
TCTAGGAGGCCAAAGGCTGG+GGG 0.624607 4.2:+89729038 MS.gene75365:CDS
AGCATATGTGCCTGTCGAGG+AGG 0.627896 4.2:+89728635 MS.gene75365:CDS
AACAATGGAGATGATGTACA+AGG 0.631124 4.2:+89730087 MS.gene75365:CDS
GAACATAGATCATGAAACGT+CGG 0.633210 4.2:-89730267 None:intergenic
TGTTGTCCCAATGTGGCCAG+AGG 0.634138 4.2:+89730015 MS.gene75365:CDS
GAGGGATTCTAGGAGGCCAA+AGG 0.637811 4.2:+89729031 MS.gene75365:CDS
CTTCTGGTGATGAGTAAACA+TGG 0.641961 4.2:-89729291 None:intergenic
CGAGGAGGTCTTGAATGGTG+AGG 0.642464 4.2:+89728650 MS.gene75365:CDS
TGAGGAAATTGATAGGTGGG+TGG 0.645001 4.2:+89728668 MS.gene75365:CDS
GCATTATGGTATGAGCACCT+TGG 0.646788 4.2:+89730576 MS.gene75365:CDS
CACCATCATCAGGATTGCGG+GGG 0.647197 4.2:-89729238 None:intergenic
TGAGCCTCATCGGTGTTGGG+AGG 0.651132 4.2:+89728929 MS.gene75365:CDS
AGGAGTCATGAAGCATGCCA+AGG 0.651697 4.2:-89730593 None:intergenic
GTTGTCCCAATGTGGCCAGA+GGG 0.653005 4.2:+89730016 MS.gene75365:CDS
AAGAGCATATGTGCCTGTCG+AGG 0.653021 4.2:+89728632 MS.gene75365:CDS
AATCGGGAAGTAAAGAAACA+AGG 0.653307 4.2:+89730184 MS.gene75365:CDS
TATCATATCTTCCATCACAA+AGG 0.653464 4.2:-89729391 None:intergenic
ATCAACCAAAGATCAATGGA+CGG 0.654662 4.2:+89730459 MS.gene75365:CDS
CGTATACTTTCTTCTCACAG+AGG 0.655571 4.2:+89728820 MS.gene75365:CDS
AGCGAAGCAAGTGTCCAGGA+AGG 0.657401 4.2:-89730710 None:intergenic
AATAAAACAGTACCATGCTG+AGG 0.661732 4.2:-89727390 None:intergenic
GGGTGTCCCAGAAAGTGCAT+CGG 0.663109 4.2:+89730036 MS.gene75365:CDS
CAACGATGGAGGAAGCAAGG+TGG 0.668752 4.2:+89729584 MS.gene75365:CDS
ACAGTGAATTACCTGGTGGA+GGG 0.669519 4.2:+89729327 MS.gene75365:CDS
AAGAACGTCAAATAATTCCG+AGG 0.670151 4.2:-89730151 None:intergenic
AAGCGATCGGTCCTTCAAGG+CGG 0.671322 4.2:-89729538 None:intergenic
GGTGCTGCAATCACAAAAGG+CGG 0.672665 4.2:+89729485 MS.gene75365:CDS
ACTCAGGGCAAAGGGAATCG+AGG 0.672681 4.2:+89730123 MS.gene75365:CDS
ATGGTGAGGAAATTGATAGG+TGG 0.675988 4.2:+89728664 MS.gene75365:CDS
TCTTTACTTCCCGATTACCG+AGG 0.680953 4.2:-89730177 None:intergenic
ATATCCTCCCAACACCGATG+AGG 0.682280 4.2:-89728933 None:intergenic
TGTTTGGGATGATAGAACAT+CGG 0.683265 4.2:+89729124 MS.gene75365:CDS
CCCAAAATACCACTTTCTGG+TGG 0.685081 4.2:+89728897 MS.gene75365:CDS
TGTACGTTGTTGTCCCAATG+TGG 0.686098 4.2:+89730008 MS.gene75365:CDS
GCTGCAAGACAGCCAGCACG+TGG 0.687862 4.2:+89730531 MS.gene75365:CDS
TGTCACGAAAGACCGCAGCT+GGG 0.688731 4.2:+89728761 MS.gene75365:CDS
GTTGATAAGCTTAATGCTGG+TGG 0.689428 4.2:+89727355 MS.gene75365:CDS
ACCAAGGCTCGGATTCTCGG+CGG 0.691037 4.2:+89730798 MS.gene75365:CDS
ATAATGCCATGCGAAAACCA+TGG 0.691651 4.2:-89730560 None:intergenic
GTTGTGGACAGTGAATTACC+TGG 0.700680 4.2:+89729320 MS.gene75365:CDS
ATCATCCGGAAATGTTACCG+GGG 0.705073 4.2:-89729660 None:intergenic
CCCCGCAATCCTGATGATGG+TGG 0.710398 4.2:+89729239 MS.gene75365:CDS
TTAACTTTGAGCAACGATGG+AGG 0.710551 4.2:+89729573 MS.gene75365:CDS
CCTCCTAGAATCCCTCACCA+AGG 0.715713 4.2:-89729024 None:intergenic
GGACTGGCAGAGGAGAACAA+TGG 0.727822 4.2:+89730072 MS.gene75365:CDS
AGTACCTTCAAAGAACTGTG+CGG 0.748352 4.2:-89729195 None:intergenic
CTGGTGATGAGTAAACATGG+TGG 0.787330 4.2:-89729288 None:intergenic
GTGGACAGTGAATTACCTGG+TGG 0.804441 4.2:+89729323 MS.gene75365:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTGTTTTATTAATTTATTT+TGG + chr4.2:89727402-89727421 MS.gene75365:intron 10.0%
!! ATAAGTATAAGCAAATAAAT+AGG - chr4.2:89728384-89728403 None:intergenic 15.0%
!! TAAGTATAAGCAAATAAATA+GGG - chr4.2:89728383-89728402 None:intergenic 15.0%
!!! AAAAAAAAAGAATATTTTGG+TGG + chr4.2:89727536-89727555 MS.gene75365:intron 15.0%
!!! ATTTTTAGATTTCATGTTTT+TGG + chr4.2:89727454-89727473 MS.gene75365:intron 15.0%
!! AAATTACTGTCTTAAATTAC+AGG + chr4.2:89730318-89730337 MS.gene75365:intron 20.0%
!! ATGCATATATTAATGCTATT+CGG + chr4.2:89729819-89729838 MS.gene75365:CDS 20.0%
!! GATAAAGTTAATGATTATTC+AGG - chr4.2:89728092-89728111 None:intergenic 20.0%
!!! TAATTTGTTTGATTTAGCTT+TGG - chr4.2:89728260-89728279 None:intergenic 20.0%
!!! TTAATTTATTTTGGCCTATT+TGG + chr4.2:89727411-89727430 MS.gene75365:intron 20.0%
! AAACACATGATATACATTAC+CGG + chr4.2:89728978-89728997 MS.gene75365:CDS 25.0%
! AATAGGGTCATTAATAATGA+AGG - chr4.2:89728367-89728386 None:intergenic 25.0%
! ATTGAAAATCAGTATTTCCT+TGG + chr4.2:89729863-89729882 MS.gene75365:CDS 25.0%
! TGTTTATACATACATTCACA+TGG + chr4.2:89728294-89728313 MS.gene75365:intron 25.0%
! TTGAATCATTAGATCCAAAT+AGG - chr4.2:89727428-89727447 None:intergenic 25.0%
!! AATATTGATAATTGACCAAC+AGG - chr4.2:89727777-89727796 None:intergenic 25.0%
!!! AAAAAAGAATATTTTGGTGG+TGG + chr4.2:89727539-89727558 MS.gene75365:intron 25.0%
!!! AAAAAGAATATTTTGGTGGT+GGG + chr4.2:89727540-89727559 MS.gene75365:intron 25.0%
AAACGCAAAACTAAAGAAAC+TGG - chr4.2:89728334-89728353 None:intergenic 30.0%
AAACTTACCTATCATCATCT+TGG - chr4.2:89730296-89730315 None:intergenic 30.0%
AAAGCAAAATCCAATGAGTA+AGG - chr4.2:89728176-89728195 None:intergenic 30.0%
AAATCAAGAATGTATCCGTA+AGG + chr4.2:89730629-89730648 MS.gene75365:CDS 30.0%
ATCTTAAGTGAAAGTTCCTT+TGG - chr4.2:89729953-89729972 None:intergenic 30.0%
ATTATGAGTAAGATTGAAGC+CGG + chr4.2:89729971-89729990 MS.gene75365:CDS 30.0%
CTAAAGAAAAAGTCTAGTGA+AGG + chr4.2:89729083-89729102 MS.gene75365:CDS 30.0%
TACATTGCACATACATACAT+AGG + chr4.2:89728211-89728230 MS.gene75365:intron 30.0%
TATCATATCTTCCATCACAA+AGG - chr4.2:89729394-89729413 None:intergenic 30.0%
TCTTAAGTGAAAGTTCCTTT+GGG - chr4.2:89729952-89729971 None:intergenic 30.0%
TGCTTATACTTATACAGATC+AGG + chr4.2:89728391-89728410 MS.gene75365:intron 30.0%
TGTTTATACCGAAATTTCCT+TGG + chr4.2:89729007-89729026 MS.gene75365:CDS 30.0%
! ATTCTTGATTTTCTGGATGA+AGG - chr4.2:89730620-89730639 None:intergenic 30.0%
! GTATATCATGTGTTTTGCAT+TGG - chr4.2:89728973-89728992 None:intergenic 30.0%
! TGTTTAGATCTATTGATGGT+GGG + chr4.2:89729705-89729724 MS.gene75365:CDS 30.0%
! TTGGATTTTGCTTTCGTTAT+TGG + chr4.2:89728182-89728201 MS.gene75365:intron 30.0%
!! ATTTTGGGGATGAAATTATC+CGG - chr4.2:89728885-89728904 None:intergenic 30.0%
!! TAGGTTGATGAAAATCATCA+TGG - chr4.2:89729457-89729476 None:intergenic 30.0%
!! TGATTTAGCTTTGGTTATTC+AGG - chr4.2:89728251-89728270 None:intergenic 30.0%
!!! AAAAGAATATTTTGGTGGTG+GGG + chr4.2:89727541-89727560 MS.gene75365:intron 30.0%
!!! AAGAATTGTGAGTTTTGTTG+GGG + chr4.2:89729361-89729380 MS.gene75365:CDS 30.0%
!!! GAAGAATTGTGAGTTTTGTT+GGG + chr4.2:89729360-89729379 MS.gene75365:CDS 30.0%
AACAATGGAGATGATGTACA+AGG + chr4.2:89730087-89730106 MS.gene75365:CDS 35.0%
AACATAGATCATGAAACGTC+GGG - chr4.2:89730269-89730288 None:intergenic 35.0%
AAGAACGTCAAATAATTCCG+AGG - chr4.2:89730154-89730173 None:intergenic 35.0%
AATAAAACAGTACCATGCTG+AGG - chr4.2:89727393-89727412 None:intergenic 35.0%
AATCGGGAAGTAAAGAAACA+AGG + chr4.2:89730184-89730203 MS.gene75365:CDS 35.0%
ACATGATATACATTACCGGT+TGG + chr4.2:89728982-89729001 MS.gene75365:CDS 35.0%
ACCAGATTGCTGACAAATAT+TGG + chr4.2:89730655-89730674 MS.gene75365:CDS 35.0%
AGATCAGTTGAATGAACACA+AGG - chr4.2:89728065-89728084 None:intergenic 35.0%
AGGATTTACTTGTCTCTCTA+AGG + chr4.2:89729609-89729628 MS.gene75365:CDS 35.0%
ATCAACCAAAGATCAATGGA+CGG + chr4.2:89730459-89730478 MS.gene75365:CDS 35.0%
ATGAGCATACTAATCCCAAA+TGG + chr4.2:89728517-89728536 MS.gene75365:CDS 35.0%
ATGGCACAAATTCATCTTCA+TGG + chr4.2:89727307-89727326 MS.gene75365:CDS 35.0%
CAAAACATTGAGGAAACTGT+TGG + chr4.2:89728414-89728433 MS.gene75365:CDS 35.0%
CAAAATATTGCAGCTTCACA+TGG - chr4.2:89728740-89728759 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG + chr4.2:89730455-89730474 MS.gene75365:CDS 35.0%
CACAAGGTAGTTTCAATTGA+AGG - chr4.2:89728049-89728068 None:intergenic 35.0%
CAGCTGTTTAGATCTATTGA+TGG + chr4.2:89729701-89729720 MS.gene75365:CDS 35.0%
CATCTGTTACAAATTAGGCA+TGG - chr4.2:89727875-89727894 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG + chr4.2:89730656-89730675 MS.gene75365:CDS 35.0%
CTGTTTAGATCTATTGATGG+TGG + chr4.2:89729704-89729723 MS.gene75365:CDS 35.0%
GAAAAAAACCCGATACAAGA+GGG + chr4.2:89728705-89728724 MS.gene75365:CDS 35.0%
GAACATAGATCATGAAACGT+CGG - chr4.2:89730270-89730289 None:intergenic 35.0%
GATATTAAGCCTGAAGACAT+TGG + chr4.2:89729911-89729930 MS.gene75365:CDS 35.0%
GATGACGAATACATAATCGT+TGG + chr4.2:89730426-89730445 MS.gene75365:CDS 35.0%
GGATTTACTTGTCTCTCTAA+GGG + chr4.2:89729610-89729629 MS.gene75365:CDS 35.0%
GTGAAAGATGATAATCCTGT+TGG + chr4.2:89728594-89728613 MS.gene75365:CDS 35.0%
GTTCATACCAAGATGATGAT+AGG + chr4.2:89730286-89730305 MS.gene75365:CDS 35.0%
TCACATTTACTGTGCTCATA+TGG + chr4.2:89728551-89728570 MS.gene75365:CDS 35.0%
TCTTCATGCTACTATCTATG+AGG + chr4.2:89727333-89727352 MS.gene75365:CDS 35.0%
TGAAAAAAACCCGATACAAG+AGG + chr4.2:89728704-89728723 MS.gene75365:CDS 35.0%
TGAAAAGACTCGTACCATTT+GGG - chr4.2:89728534-89728553 None:intergenic 35.0%
TGAATGGTGAGGAAATTGAT+AGG + chr4.2:89728661-89728680 MS.gene75365:CDS 35.0%
TTATGAGTAAGATTGAAGCC+GGG + chr4.2:89729972-89729991 MS.gene75365:CDS 35.0%
TTTCATCAACCTAACTTTCC+AGG + chr4.2:89729464-89729483 MS.gene75365:CDS 35.0%
! ACTCTATGCTACCATTGATT+TGG + chr4.2:89728458-89728477 MS.gene75365:CDS 35.0%
! ATTCAAAGCGCTAAATTTCC+TGG + chr4.2:89728792-89728811 MS.gene75365:CDS 35.0%
! CATGCCTAATTTGTAACAGA+TGG + chr4.2:89727873-89727892 MS.gene75365:intron 35.0%
! CATTGATCTTTGGTTGATGT+TGG - chr4.2:89730457-89730476 None:intergenic 35.0%
! CCTAATTTGTAACAGATGGT+GGG + chr4.2:89727877-89727896 MS.gene75365:intron 35.0%
! CGGATACATTCTTGATTTTC+TGG - chr4.2:89730627-89730646 None:intergenic 35.0%
! CTAATTTGTAACAGATGGTG+GGG + chr4.2:89727878-89727897 MS.gene75365:intron 35.0%
! CTCTGTGAGAAGAAAGTATA+CGG - chr4.2:89728822-89728841 None:intergenic 35.0%
! TGTTTAACTTTGAGCAACGA+TGG + chr4.2:89729570-89729589 MS.gene75365:CDS 35.0%
! TGTTTGGGATGATAGAACAT+CGG + chr4.2:89729124-89729143 MS.gene75365:CDS 35.0%
! TTGATTTTCTGGATGAAGGA+AGG - chr4.2:89730616-89730635 None:intergenic 35.0%
! TTTAAGGTGGCTCAAAATGA+CGG + chr4.2:89727910-89727929 MS.gene75365:intron 35.0%
!! AAAAGTCTAGTGAAGGTGTT+AGG + chr4.2:89729090-89729109 MS.gene75365:CDS 35.0%
!! AAAGTCTAGTGAAGGTGTTA+GGG + chr4.2:89729091-89729110 MS.gene75365:CDS 35.0%
!! ATCGGTTGGTTTGTTGAAAA+AGG + chr4.2:89729142-89729161 MS.gene75365:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+TGG + chr4.2:89729359-89729378 MS.gene75365:CDS 35.0%
!! GTTCTAAAAAGTGAGTGGAA+TGG - chr4.2:89729419-89729438 None:intergenic 35.0%
!! GTTGGTTTGTTGAAAAAGGA+TGG + chr4.2:89729146-89729165 MS.gene75365:CDS 35.0%
!! GTTTAGATCTATTGATGGTG+GGG + chr4.2:89729706-89729725 MS.gene75365:CDS 35.0%
!! TAGGGTTTTGATGCTTGTTT+GGG + chr4.2:89729109-89729128 MS.gene75365:CDS 35.0%
!! TTAGGGTTTTGATGCTTGTT+TGG + chr4.2:89729108-89729127 MS.gene75365:CDS 35.0%
!!! AGAATTGTGAGTTTTGTTGG+GGG + chr4.2:89729362-89729381 MS.gene75365:CDS 35.0%
AAGTCTCATCACAGATTCAC+TGG - chr4.2:89727683-89727702 None:intergenic 40.0%
ACAGATCAGGCAAAACATTG+AGG + chr4.2:89728404-89728423 MS.gene75365:intron 40.0%
ACAGATCCTAAAAGCAAGCA+GGG - chr4.2:89727589-89727608 None:intergenic 40.0%
ACTTTCTTCTCACAGAGGAA+AGG + chr4.2:89728825-89728844 MS.gene75365:CDS 40.0%
AGTACCTTCAAAGAACTGTG+CGG - chr4.2:89729198-89729217 None:intergenic 40.0%
ATAATGCCATGCGAAAACCA+TGG - chr4.2:89730563-89730582 None:intergenic 40.0%
ATACCGAAATTTCCTTGGTG+AGG + chr4.2:89729012-89729031 MS.gene75365:CDS 40.0%
ATCCCCAAAATACCACTTTC+TGG + chr4.2:89728894-89728913 MS.gene75365:CDS 40.0%
ATCCCTCACCAAGGAAATTT+CGG - chr4.2:89729018-89729037 None:intergenic 40.0%
ATCTTCGAACCCTCTTGTAT+CGG - chr4.2:89728717-89728736 None:intergenic 40.0%
ATGGTGAGGAAATTGATAGG+TGG + chr4.2:89728664-89728683 MS.gene75365:CDS 40.0%
CCCAATATTTGTCAGCAATC+TGG - chr4.2:89730659-89730678 None:intergenic 40.0%
CCCACCATCTGTTACAAATT+AGG - chr4.2:89727880-89727899 None:intergenic 40.0%
CCTGTTGGAGCAACTTTAAT+CGG + chr4.2:89728609-89728628 MS.gene75365:CDS 40.0%
CGTATACTTTCTTCTCACAG+AGG + chr4.2:89728820-89728839 MS.gene75365:CDS 40.0%
GATGTACAAGGATATCGTTC+TGG + chr4.2:89730099-89730118 MS.gene75365:CDS 40.0%
GTGAAAAGACTCGTACCATT+TGG - chr4.2:89728535-89728554 None:intergenic 40.0%
TACCGAAATTTCCTTGGTGA+GGG + chr4.2:89729013-89729032 MS.gene75365:CDS 40.0%
TACTCATCACCAGAAGATTG+TGG + chr4.2:89729298-89729317 MS.gene75365:CDS 40.0%
TATGAGTAAGATTGAAGCCG+GGG + chr4.2:89729973-89729992 MS.gene75365:CDS 40.0%
TATTTGACGTTCTTCTGCCT+CGG + chr4.2:89730160-89730179 MS.gene75365:CDS 40.0%
TCGGGGAAAAATTCAAATCC+AGG - chr4.2:89730777-89730796 None:intergenic 40.0%
TCGTAATCTGAATCAGGTTC+TGG - chr4.2:89730232-89730251 None:intergenic 40.0%
TCTTGCCTTCTCCAAATCAA+TGG - chr4.2:89728472-89728491 None:intergenic 40.0%
TGAGCCACCTTAAAACTACA+TGG - chr4.2:89727904-89727923 None:intergenic 40.0%
TGATCATCCGGAAATGTTAC+CGG - chr4.2:89729665-89729684 None:intergenic 40.0%
TGGTGAGGAAATTGATAGGT+GGG + chr4.2:89728665-89728684 MS.gene75365:CDS 40.0%
TGTCTTGCAGCTAAATGGTA+GGG - chr4.2:89730522-89730541 None:intergenic 40.0%
TTAACTTTGAGCAACGATGG+AGG + chr4.2:89729573-89729592 MS.gene75365:CDS 40.0%
TTACAAATTAGGCATGGCAG+TGG - chr4.2:89727869-89727888 None:intergenic 40.0%
TTACCAAGATTCTCATGTGC+CGG + chr4.2:89728863-89728882 MS.gene75365:CDS 40.0%
TTCGGTATAAACAGACCAAC+CGG - chr4.2:89729000-89729019 None:intergenic 40.0%
TTCTATTATTCCTCCATCCC+CGG + chr4.2:89729643-89729662 MS.gene75365:CDS 40.0%
! AAGAAAGTATACGGAACTCC+AGG - chr4.2:89728813-89728832 None:intergenic 40.0%
! ATGGTTTTCGCATGGCATTA+TGG + chr4.2:89730562-89730581 MS.gene75365:CDS 40.0%
! ATTGAGGAAACTGTTGGTCT+TGG + chr4.2:89728420-89728439 MS.gene75365:CDS 40.0%
! CACCAGAAAGTGGTATTTTG+GGG - chr4.2:89728899-89728918 None:intergenic 40.0%
! CCACCAGAAAGTGGTATTTT+GGG - chr4.2:89728900-89728919 None:intergenic 40.0%
! CTTCTGGTGATGAGTAAACA+TGG - chr4.2:89729294-89729313 None:intergenic 40.0%
! GCCTAATTTGTAACAGATGG+TGG + chr4.2:89727876-89727895 MS.gene75365:intron 40.0%
! GTTGATAAGCTTAATGCTGG+TGG + chr4.2:89727355-89727374 MS.gene75365:CDS 40.0%
! TCAGTGTTATCGATTGCAGA+TGG - chr4.2:89727961-89727980 None:intergenic 40.0%
! TGAATCAGGTTCTGGTTGTT+CGG - chr4.2:89730224-89730243 None:intergenic 40.0%
! TGATAGGTGGGTGGAAATTT+TGG + chr4.2:89728677-89728696 MS.gene75365:CDS 40.0%
!! CATGTGTTTTGCATTGGTGA+TGG - chr4.2:89728967-89728986 None:intergenic 40.0%
!! GAAACTGTTGGTCTTGGAAA+GGG + chr4.2:89728426-89728445 MS.gene75365:CDS 40.0%
!! GAGGTTGATAAGCTTAATGC+TGG + chr4.2:89727352-89727371 MS.gene75365:CDS 40.0%
!! GTTGAAAAAGGATGGACTGA+TGG + chr4.2:89729154-89729173 MS.gene75365:CDS 40.0%
!! TGCATCGGTTCAAGCAATAT+TGG + chr4.2:89730051-89730070 MS.gene75365:CDS 40.0%
!! TGCTACCATTGATTTGGAGA+AGG + chr4.2:89728464-89728483 MS.gene75365:CDS 40.0%
AACAACACATCCCAAGCGAT+CGG - chr4.2:89729554-89729573 None:intergenic 45.0%
AAGTAGTAAGGATAGGAGGG+AGG - chr4.2:89730836-89730855 None:intergenic 45.0%
AATCACAAAAGGCGGTCCAA+GGG + chr4.2:89729493-89729512 MS.gene75365:CDS 45.0%
ACAGTGAATTACCTGGTGGA+GGG + chr4.2:89729327-89729346 MS.gene75365:CDS 45.0%
AGCTAAATGGTAGGGCTGAT+AGG - chr4.2:89730514-89730533 None:intergenic 45.0%
AGCTGGGCTTATTAGTGGAA+AGG + chr4.2:89729769-89729788 MS.gene75365:CDS 45.0%
ATCATCCGGAAATGTTACCG+GGG - chr4.2:89729663-89729682 None:intergenic 45.0%
ATGATGCTACCACCATCATC+AGG - chr4.2:89729251-89729270 None:intergenic 45.0%
ATTGCAGCACCTGGAAAGTT+AGG - chr4.2:89729476-89729495 None:intergenic 45.0%
CACAGATCCTAAAAGCAAGC+AGG - chr4.2:89727590-89727609 None:intergenic 45.0%
CAGCATCTTCAGGAGTTTCT+GGG - chr4.2:89729745-89729764 None:intergenic 45.0%
CCAACAGGTTTGCGAATGAT+CGG - chr4.2:89727762-89727781 None:intergenic 45.0%
CCCAAAATACCACTTTCTGG+TGG + chr4.2:89728897-89728916 MS.gene75365:CDS 45.0%
CCGATTAAAGTTGCTCCAAC+AGG - chr4.2:89728612-89728631 None:intergenic 45.0%
CCTTCACTAGCAACTCCAAT+CGG - chr4.2:89730738-89730757 None:intergenic 45.0%
CGGTTCAAGCAATATTGGAC+TGG + chr4.2:89730056-89730075 MS.gene75365:CDS 45.0%
CTCACAGAGGAAAGGATGTA+AGG + chr4.2:89728833-89728852 MS.gene75365:CDS 45.0%
CTGTCTTGCAGCTAAATGGT+AGG - chr4.2:89730523-89730542 None:intergenic 45.0%
CTTGAACCGATGCACTTTCT+GGG - chr4.2:89730045-89730064 None:intergenic 45.0%
GAAACCGCACAGTTCTTTGA+AGG + chr4.2:89729191-89729210 MS.gene75365:CDS 45.0%
GATAAGCTTAATGCTGGTGG+TGG + chr4.2:89727358-89727377 MS.gene75365:CDS 45.0%
GATCATCCGGAAATGTTACC+GGG - chr4.2:89729664-89729683 None:intergenic 45.0%
GATTTGGAGAAGGCAAGAGT+GGG + chr4.2:89728474-89728493 MS.gene75365:CDS 45.0%
GCAAGACTTATGAGCCTCAT+CGG + chr4.2:89728919-89728938 MS.gene75365:CDS 45.0%
GCATTATGGTATGAGCACCT+TGG + chr4.2:89730576-89730595 MS.gene75365:CDS 45.0%
GCTCTCTCGTAATCTGAATC+AGG - chr4.2:89730238-89730257 None:intergenic 45.0%
GGATCACTGATGCATCAAAG+TGG + chr4.2:89727562-89727581 MS.gene75365:intron 45.0%
GTTGTGGACAGTGAATTACC+TGG + chr4.2:89729320-89729339 MS.gene75365:CDS 45.0%
TAAGTCTTGCCACCAGAAAG+TGG - chr4.2:89728909-89728928 None:intergenic 45.0%
TACCACCATCATCAGGATTG+CGG - chr4.2:89729244-89729263 None:intergenic 45.0%
TATCCGGCACATGAGAATCT+TGG - chr4.2:89728869-89728888 None:intergenic 45.0%
TCACCAGAAGATTGTGGTTG+TGG + chr4.2:89729304-89729323 MS.gene75365:CDS 45.0%
TCCAAGCAAAAGAGCTTCCA+AGG - chr4.2:89729883-89729902 None:intergenic 45.0%
TCTTCGAACCCTCTTGTATC+GGG - chr4.2:89728716-89728735 None:intergenic 45.0%
TCTTTACTTCCCGATTACCG+AGG - chr4.2:89730180-89730199 None:intergenic 45.0%
TGAGGAAATTGATAGGTGGG+TGG + chr4.2:89728668-89728687 MS.gene75365:CDS 45.0%
TGCTTCAGCACCTTACTCAT+TGG + chr4.2:89728163-89728182 MS.gene75365:intron 45.0%
TGCTTTGCATCTCATCCCAA+AGG + chr4.2:89729934-89729953 MS.gene75365:CDS 45.0%
TGGAGGAAATTTCCTCAGCA+TGG + chr4.2:89727378-89727397 MS.gene75365:CDS 45.0%
TGGGATGATAGAACATCGGT+TGG + chr4.2:89729128-89729147 MS.gene75365:CDS 45.0%
TGTACGTTGTTGTCCCAATG+TGG + chr4.2:89730008-89730027 MS.gene75365:CDS 45.0%
TGTCCACAACCACAATCTTC+TGG - chr4.2:89729310-89729329 None:intergenic 45.0%
TTCCATGTCTCGTGATCATC+CGG - chr4.2:89729677-89729696 None:intergenic 45.0%
TTTCCTTGGTGAGGGATTCT+AGG + chr4.2:89729021-89729040 MS.gene75365:CDS 45.0%
! CAGCAATCTGGTTCACCTTA+CGG - chr4.2:89730647-89730666 None:intergenic 45.0%
! CTGGTGATGAGTAAACATGG+TGG - chr4.2:89729291-89729310 None:intergenic 45.0%
! GCCACCAGAAAGTGGTATTT+TGG - chr4.2:89728901-89728920 None:intergenic 45.0%
! GTACACAGTGAACTTTTCCC+CGG - chr4.2:89729993-89730012 None:intergenic 45.0%
! GTGTTATCGATTGCAGATGG+CGG - chr4.2:89727958-89727977 None:intergenic 45.0%
! TCAAGTCCATGGTTTTCGCA+TGG + chr4.2:89730554-89730573 MS.gene75365:CDS 45.0%
! TCCTTGGAAGCTCTTTTGCT+TGG + chr4.2:89729879-89729898 MS.gene75365:CDS 45.0%
! TGAATTTTTCCCCGACACCA+AGG + chr4.2:89730782-89730801 MS.gene75365:CDS 45.0%
! TGATTTGGAGAAGGCAAGAG+TGG + chr4.2:89728473-89728492 MS.gene75365:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG - chr4.2:89729923-89729942 None:intergenic 45.0%
! TTATGAGCCTCATCGGTGTT+GGG + chr4.2:89728926-89728945 MS.gene75365:CDS 45.0%
!! AAGCAATATTGGACTGGCAG+AGG + chr4.2:89730062-89730081 MS.gene75365:CDS 45.0%
!! CGAGGGTTCTAAAAAGTGAG+TGG - chr4.2:89729424-89729443 None:intergenic 45.0%
!! GGAAACTGTTGGTCTTGGAA+AGG + chr4.2:89728425-89728444 MS.gene75365:CDS 45.0%
!! TGATGGTGGTAGCATCATTC+AGG + chr4.2:89729253-89729272 MS.gene75365:CDS 45.0%
!!! GGACTTTTGGCTTTCTACCA+TGG + chr4.2:89727931-89727950 MS.gene75365:intron 45.0%
!!! GGCTCAAAATGACGGACTTT+TGG + chr4.2:89727918-89727937 MS.gene75365:intron 45.0%
!!! AAAAAAAAAAAAGAATATTT+TGG + chr4.2:89727533-89727552 MS.gene75365:intron 5.0%
AAAGATCAATGGACGGAGCG+AGG + chr4.2:89730466-89730485 MS.gene75365:CDS 50.0%
AACGATGGAGGAAGCAAGGT+GGG + chr4.2:89729585-89729604 MS.gene75365:CDS 50.0%
AAGATCAATGGACGGAGCGA+GGG + chr4.2:89730467-89730486 MS.gene75365:CDS 50.0%
ACCACCATCATCAGGATTGC+GGG - chr4.2:89729243-89729262 None:intergenic 50.0%
AGGAGTCATGAAGCATGCCA+AGG - chr4.2:89730596-89730615 None:intergenic 50.0%
AGGATATCGTTCTGGCACTC+AGG + chr4.2:89730107-89730126 MS.gene75365:CDS 50.0%
AGGGAATCGAGGAAGATCCT+CGG + chr4.2:89730134-89730153 MS.gene75365:CDS 50.0%
AGTGGCCAAAATATCCGCCA+TGG - chr4.2:89727851-89727870 None:intergenic 50.0%
ATATCCTCCCAACACCGATG+AGG - chr4.2:89728936-89728955 None:intergenic 50.0%
ATCATGGTGTGCTGTGTCGA+GGG - chr4.2:89729441-89729460 None:intergenic 50.0%
ATGTCATGCCAAGGTTCCCT+TGG - chr4.2:89729512-89729531 None:intergenic 50.0%
CAATCACAAAAGGCGGTCCA+AGG + chr4.2:89729492-89729511 MS.gene75365:CDS 50.0%
CACTTGCTTCGCTATCCGAT+TGG + chr4.2:89730720-89730739 MS.gene75365:CDS 50.0%
CATGAAACGTCGGGACTGTT+GGG - chr4.2:89730260-89730279 None:intergenic 50.0%
CCGATCATTCGCAAACCTGT+TGG + chr4.2:89727759-89727778 MS.gene75365:intron 50.0%
CCGATTGGAGTTGCTAGTGA+AGG + chr4.2:89730735-89730754 MS.gene75365:CDS 50.0%
CGGGAATGAATGTCATGCCA+AGG - chr4.2:89729521-89729540 None:intergenic 50.0%
CGTTCTTCTGCCTCGGTAAT+CGG + chr4.2:89730167-89730186 MS.gene75365:CDS 50.0%
CTGGCTGTCTTGCAGCTAAA+TGG - chr4.2:89730527-89730546 None:intergenic 50.0%
CTTATGAGCCTCATCGGTGT+TGG + chr4.2:89728925-89728944 MS.gene75365:CDS 50.0%
GACAGTGAATTACCTGGTGG+AGG + chr4.2:89729326-89729345 MS.gene75365:CDS 50.0%
GACATTCATTCCCGCCTTGA+AGG + chr4.2:89729527-89729546 MS.gene75365:CDS 50.0%
GCAGCATCTTCAGGAGTTTC+TGG - chr4.2:89729746-89729765 None:intergenic 50.0%
GCTTGAACCGATGCACTTTC+TGG - chr4.2:89730046-89730065 None:intergenic 50.0%
GGATATCGTTCTGGCACTCA+GGG + chr4.2:89730108-89730127 MS.gene75365:CDS 50.0%
GTGGACAGTGAATTACCTGG+TGG + chr4.2:89729323-89729342 MS.gene75365:CDS 50.0%
GTTCTTCTGCCTCGGTAATC+GGG + chr4.2:89730168-89730187 MS.gene75365:CDS 50.0%
TCATGAAACGTCGGGACTGT+TGG - chr4.2:89730261-89730280 None:intergenic 50.0%
TCCATCCCCGGTAACATTTC+CGG + chr4.2:89729655-89729674 MS.gene75365:CDS 50.0%
TCGCTCCGTCCATTGATCTT+TGG - chr4.2:89730467-89730486 None:intergenic 50.0%
TGAATTACCTGGTGGAGGGT+CGG + chr4.2:89729331-89729350 MS.gene75365:CDS 50.0%
TTCCGGATGATCACGAGACA+TGG + chr4.2:89729672-89729691 MS.gene75365:CDS 50.0%
! AAGAGCATATGTGCCTGTCG+AGG + chr4.2:89728632-89728651 MS.gene75365:CDS 50.0%
! ATTCTAGGAGGCCAAAGGCT+GGG + chr4.2:89729036-89729055 MS.gene75365:CDS 50.0%
! CCAGGTGCTGCAATCACAAA+AGG + chr4.2:89729482-89729501 MS.gene75365:CDS 50.0%
! CCTTTTGTGATTGCAGCACC+TGG - chr4.2:89729485-89729504 None:intergenic 50.0%
! CTCTTTTGCTTGGAGTGGTG+AGG + chr4.2:89729889-89729908 MS.gene75365:CDS 50.0%
! GGAAGCTCTTTTGCTTGGAG+TGG + chr4.2:89729884-89729903 MS.gene75365:CDS 50.0%
! GGTGCTGCAATCACAAAAGG+CGG + chr4.2:89729485-89729504 MS.gene75365:CDS 50.0%
! TCAGGTTCTGGTTGTTCGGA+AGG - chr4.2:89730220-89730239 None:intergenic 50.0%
!! AAGCTTAATGCTGGTGGTGG+AGG + chr4.2:89727361-89727380 MS.gene75365:CDS 50.0%
!! AGGGACTCTGAGATAGCGAT+GGG + chr4.2:89730486-89730505 MS.gene75365:CDS 50.0%
!! AGTGGACCCTGCTTGCTTTT+AGG + chr4.2:89727580-89727599 MS.gene75365:intron 50.0%
!! ATTGATGGTGGGGCTGCTTT+CGG + chr4.2:89729716-89729735 MS.gene75365:CDS 50.0%
!! GGTGGGGCCATGTAGTTTTA+AGG + chr4.2:89727894-89727913 MS.gene75365:intron 50.0%
!!! GGGGCCATGTAGTTTTAAGG+TGG + chr4.2:89727897-89727916 MS.gene75365:intron 50.0%
AAGCGATCGGTCCTTCAAGG+CGG - chr4.2:89729541-89729560 None:intergenic 55.0%
ACTCAGGGCAAAGGGAATCG+AGG + chr4.2:89730123-89730142 MS.gene75365:CDS 55.0%
AGCATATGTGCCTGTCGAGG+AGG + chr4.2:89728635-89728654 MS.gene75365:CDS 55.0%
AGCGAAGCAAGTGTCCAGGA+AGG - chr4.2:89730713-89730732 None:intergenic 55.0%
ATGGAGGAAGCAAGGTGGGA+AGG + chr4.2:89729589-89729608 MS.gene75365:CDS 55.0%
ATGTCACGAAAGACCGCAGC+TGG + chr4.2:89728760-89728779 MS.gene75365:CDS 55.0%
CAACGATGGAGGAAGCAAGG+TGG + chr4.2:89729584-89729603 MS.gene75365:CDS 55.0%
CACCATCATCAGGATTGCGG+GGG - chr4.2:89729241-89729260 None:intergenic 55.0%
CATCATGGTGTGCTGTGTCG+AGG - chr4.2:89729442-89729461 None:intergenic 55.0%
CCACCATCATCAGGATTGCG+GGG - chr4.2:89729242-89729261 None:intergenic 55.0%
CCATTCAAGACCTCCTCGAC+AGG - chr4.2:89728648-89728667 None:intergenic 55.0%
CCTCCTAGAATCCCTCACCA+AGG - chr4.2:89729027-89729046 None:intergenic 55.0%
CCTGTCGAGGAGGTCTTGAA+TGG + chr4.2:89728645-89728664 MS.gene75365:CDS 55.0%
CCTTGAAGGACCGATCGCTT+GGG + chr4.2:89729541-89729560 MS.gene75365:CDS 55.0%
CCTTGGTGAGGGATTCTAGG+AGG + chr4.2:89729024-89729043 MS.gene75365:CDS 55.0%
CGAGGAGGTCTTGAATGGTG+AGG + chr4.2:89728650-89728669 MS.gene75365:CDS 55.0%
CTGAAGATGCTGCGAGAGCT+GGG + chr4.2:89729753-89729772 MS.gene75365:CDS 55.0%
GACACCAAGGCTCGGATTCT+CGG + chr4.2:89730795-89730814 MS.gene75365:CDS 55.0%
GAGCAACGATGGAGGAAGCA+AGG + chr4.2:89729581-89729600 MS.gene75365:CDS 55.0%
GCGAGAGCTGGGCTTATTAG+TGG + chr4.2:89729764-89729783 MS.gene75365:CDS 55.0%
GCTGGGGGAGACACAACAAT+TGG + chr4.2:89729053-89729072 MS.gene75365:CDS 55.0%
GGAAATGTTACCGGGGATGG+AGG - chr4.2:89729656-89729675 None:intergenic 55.0%
GGATAGCGAAGCAAGTGTCC+AGG - chr4.2:89730717-89730736 None:intergenic 55.0%
GGGGGTCTTGACCTTTGTGA+TGG + chr4.2:89729380-89729399 MS.gene75365:CDS 55.0%
GTTCTGGCACTCAGGGCAAA+GGG + chr4.2:89730115-89730134 MS.gene75365:CDS 55.0%
GTTGTCCCAATGTGGCCAGA+GGG + chr4.2:89730016-89730035 MS.gene75365:CDS 55.0%
TCACTTGAGCACGACCTTCC+TGG + chr4.2:89730696-89730715 MS.gene75365:CDS 55.0%
TCCGGAAATGTTACCGGGGA+TGG - chr4.2:89729659-89729678 None:intergenic 55.0%
TGGAGAAGGCAAGAGTGGGA+AGG + chr4.2:89728478-89728497 MS.gene75365:CDS 55.0%
TGTCACGAAAGACCGCAGCT+GGG + chr4.2:89728761-89728780 MS.gene75365:CDS 55.0%
TGTTGTCCCAATGTGGCCAG+AGG + chr4.2:89730015-89730034 MS.gene75365:CDS 55.0%
! GAGAATCCGAGCCTTGGTGT+CGG - chr4.2:89730796-89730815 None:intergenic 55.0%
! GAGGGATTCTAGGAGGCCAA+AGG + chr4.2:89729031-89729050 MS.gene75365:CDS 55.0%
! GATTCTAGGAGGCCAAAGGC+TGG + chr4.2:89729035-89729054 MS.gene75365:CDS 55.0%
! GGACTGGCAGAGGAGAACAA+TGG + chr4.2:89730072-89730091 MS.gene75365:CDS 55.0%
! GGGTGTCCCAGAAAGTGCAT+CGG + chr4.2:89730036-89730055 MS.gene75365:CDS 55.0%
! TTCTAGGAGGCCAAAGGCTG+GGG + chr4.2:89729037-89729056 MS.gene75365:CDS 55.0%
! TTTTCCCCGACACCAAGGCT+CGG + chr4.2:89730787-89730806 MS.gene75365:CDS 55.0%
!! AGAATCCGAGCCTTGGTGTC+GGG - chr4.2:89730795-89730814 None:intergenic 55.0%
!! GAGGGACTCTGAGATAGCGA+TGG + chr4.2:89730485-89730504 MS.gene75365:CDS 55.0%
!! TTGATGGTGGGGCTGCTTTC+GGG + chr4.2:89729717-89729736 MS.gene75365:CDS 55.0%
!!! CAGCGCCATGGCGGATATTT+TGG + chr4.2:89727843-89727862 MS.gene75365:intron 55.0%
AAGGCGGTCCAAGGGAACCT+TGG + chr4.2:89729501-89729520 MS.gene75365:CDS 60.0%
ACCAAGGCTCGGATTCTCGG+CGG + chr4.2:89730798-89730817 MS.gene75365:CDS 60.0%
AGCGATCGGTCCTTCAAGGC+GGG - chr4.2:89729540-89729559 None:intergenic 60.0%
CCAGCACGTGGTCAAGTCCA+TGG + chr4.2:89730543-89730562 MS.gene75365:CDS 60.0%
CCAGCTCTCGCAGCATCTTC+AGG - chr4.2:89729755-89729774 None:intergenic 60.0%
CCATGGACTTGACCACGTGC+TGG - chr4.2:89730546-89730565 None:intergenic 60.0%
CCCAAGCGATCGGTCCTTCA+AGG - chr4.2:89729544-89729563 None:intergenic 60.0%
CCTGAAGATGCTGCGAGAGC+TGG + chr4.2:89729752-89729771 MS.gene75365:CDS 60.0%
CGTTCTGGCACTCAGGGCAA+AGG + chr4.2:89730114-89730133 MS.gene75365:CDS 60.0%
GCCTTGAAGGACCGATCGCT+TGG + chr4.2:89729540-89729559 MS.gene75365:CDS 60.0%
GGACACCCTCTGGCCACATT+GGG - chr4.2:89730024-89730043 None:intergenic 60.0%
GGAGATGTCACACAGCTGCC+TGG + chr4.2:89730756-89730775 MS.gene75365:CDS 60.0%
GTTGTGTCTCCCCCAGCCTT+TGG - chr4.2:89729050-89729069 None:intergenic 60.0%
TATCCGCCATGGCGCTGCTA+TGG - chr4.2:89727840-89727859 None:intergenic 60.0%
TCTAGGAGGCCAAAGGCTGG+GGG + chr4.2:89729038-89729057 MS.gene75365:CDS 60.0%
TGCCCCCGCAATCCTGATGA+TGG + chr4.2:89729236-89729255 MS.gene75365:CDS 60.0%
TGTCTGCCATAGCAGCGCCA+TGG + chr4.2:89727831-89727850 MS.gene75365:intron 60.0%
!! CCCCGCAATCCTGATGATGG+TGG + chr4.2:89729239-89729258 MS.gene75365:CDS 60.0%
!! CGATTGCAGATGGCGGACCA+TGG - chr4.2:89727951-89727970 None:intergenic 60.0%
!! GAATCCGAGCCTTGGTGTCG+GGG - chr4.2:89730794-89730813 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+TGG - chr4.2:89730034-89730053 None:intergenic 60.0%
!! TGAGCCTCATCGGTGTTGGG+AGG + chr4.2:89728929-89728948 MS.gene75365:CDS 60.0%
AAAGACCGCAGCTGGGCTCG+AGG + chr4.2:89728768-89728787 MS.gene75365:CDS 65.0%
CGCTTATCCGACCCTCCACC+AGG - chr4.2:89729341-89729360 None:intergenic 65.0%
CTGCCATAGCAGCGCCATGG+CGG + chr4.2:89727834-89727853 MS.gene75365:intron 65.0%
GAATGCCTCGAGCCCAGCTG+CGG - chr4.2:89728776-89728795 None:intergenic 65.0%
GCTGCAAGACAGCCAGCACG+TGG + chr4.2:89730531-89730550 MS.gene75365:CDS 65.0%
GGGACACCCTCTGGCCACAT+TGG - chr4.2:89730025-89730044 None:intergenic 65.0%
GCCGCCGAGAATCCGAGCCT+TGG - chr4.2:89730802-89730821 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 89727307 89730857 89727307 ID=MS.gene75365
chr4.2 mRNA 89727307 89730857 89727307 ID=MS.gene75365.t1;Parent=MS.gene75365
chr4.2 exon 89727307 89727399 89727307 ID=MS.gene75365.t1.exon1;Parent=MS.gene75365.t1
chr4.2 CDS 89727307 89727399 89727307 ID=cds.MS.gene75365.t1;Parent=MS.gene75365.t1
chr4.2 exon 89728408 89730307 89728408 ID=MS.gene75365.t1.exon2;Parent=MS.gene75365.t1
chr4.2 CDS 89728408 89730307 89728408 ID=cds.MS.gene75365.t1;Parent=MS.gene75365.t1
chr4.2 exon 89730424 89730857 89730424 ID=MS.gene75365.t1.exon3;Parent=MS.gene75365.t1
chr4.2 CDS 89730424 89730857 89730424 ID=cds.MS.gene75365.t1;Parent=MS.gene75365.t1
Gene Sequence

>MS.gene75365

ATGGCACAAATTCATCTTCATGGTACTCTTCATGCTACTATCTATGAGGTTGATAAGCTTAATGCTGGTGGTGGAGGAAATTTCCTCAGCATGGTACTGTTTTATTAATTTATTTTGGCCTATTTGGATCTAATGATTCAATTGTTGATTTTTAGATTTCATGTTTTTGGATTTTGTAATTTTAAGTGCATGTGATTTCATTTGTTTTTGCAAATGATTGAATTAAAAAAAAAAAAAAGAATATTTTGGTGGTGGGGATCACTGATGCATCAAAGTGGACCCTGCTTGCTTTTAGGATCTGTGATCTGTTTCATTATTTTATATTGTACTATATTAATTAATAAATAAAAAGTTCTATTGATTTTTTTTTCTTCCAGTGAATCTGTGATGAGACTTACATTTCTAATCTGATCTTAAATTATGTAGCAACATGCATCATTTTTCTGATACTACCGATCATTCGCAAACCTGTTGGTCAATTATCAATATTAATAACAATGTTAATCTATATCAGTTTTGTCAAATGTCTGCCATAGCAGCGCCATGGCGGATATTTTGGCCACTGCCATGCCTAATTTGTAACAGATGGTGGGGCCATGTAGTTTTAAGGTGGCTCAAAATGACGGACTTTTGGCTTTCTACCATGGTCCGCCATCTGCAATCGATAACACTGATCTATATTAGTGATTGTTGTCATGTTGTAATTTAATTGTTTGCTTGACATGATTCAAGATTGTCGCCTTCAATTGAAACTACCTTGTGTTCATTCAACTGATCTTTTACCTGAATAATCATTAACTTTATCTTATGCATCTTTTGTAACACATATGCAATGTTTTAGTAAAAAAATTGTGTGTGCTTCAGCACCTTACTCATTGGATTTTGCTTTCGTTATTGGATTTTATACATTGCACATACATACATAGGAGACTGATCTTTTACCTGAATAACCAAAGCTAAATCAAACAAATTAATGTCGATTGTTTATGTTTATACATACATTCACATGGTGAAAAGAGAATATCCAGTTTCTTTAGTTTTGCGTTTTTATTTTCATCCTTCATTATTAATGACCCTATTTATTTGCTTATACTTATACAGATCAGGCAAAACATTGAGGAAACTGTTGGTCTTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCAAGAGTGGGAAGGACAAGAATTATTGAAAATGAGCATACTAATCCCAAATGGTACGAGTCTTTTCACATTTACTGTGCTCATATGGCTTCAGATATCATATTCACTGTGAAAGATGATAATCCTGTTGGAGCAACTTTAATCGGAAGAGCATATGTGCCTGTCGAGGAGGTCTTGAATGGTGAGGAAATTGATAGGTGGGTGGAAATTTTGGACACTGAAAAAAACCCGATACAAGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACGAAAGACCGCAGCTGGGCTCGAGGCATTCAAAGCGCTAAATTTCCTGGAGTTCCGTATACTTTCTTCTCACAGAGGAAAGGATGTAAGGTATCTCTTTACCAAGATTCTCATGTGCCGGATAATTTCATCCCCAAAATACCACTTTCTGGTGGCAAGACTTATGAGCCTCATCGGTGTTGGGAGGATATTTATGATGCCATCACCAATGCAAAACACATGATATACATTACCGGTTGGTCTGTTTATACCGAAATTTCCTTGGTGAGGGATTCTAGGAGGCCAAAGGCTGGGGGAGACACAACAATTGGTGAGCTTCTAAAGAAAAAGTCTAGTGAAGGTGTTAGGGTTTTGATGCTTGTTTGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGACTGATGGCTACTCATGACGAAGAAACCGCACAGTTCTTTGAAGGTACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGTAGCATCATTCAGGATTTACAAGTTTCCACCATGTTTACTCATCACCAGAAGATTGTGGTTGTGGACAGTGAATTACCTGGTGGAGGGTCGGATAAGCGAAGAATTGTGAGTTTTGTTGGGGGTCTTGACCTTTGTGATGGAAGATATGATACTCCATTCCACTCACTTTTTAGAACCCTCGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCAGGTGCTGCAATCACAAAAGGCGGTCCAAGGGAACCTTGGCATGACATTCATTCCCGCCTTGAAGGACCGATCGCTTGGGATGTGTTGTTTAACTTTGAGCAACGATGGAGGAAGCAAGGTGGGAAGGATTTACTTGTCTCTCTAAGGGAGCTTGAAGATTCTATTATTCCTCCATCCCCGGTAACATTTCCGGATGATCACGAGACATGGAACGTTCAGCTGTTTAGATCTATTGATGGTGGGGCTGCTTTCGGGTTCCCAGAAACTCCTGAAGATGCTGCGAGAGCTGGGCTTATTAGTGGAAAGGATAATATCATCGATCGTAGTATTCAAGATGCATATATTAATGCTATTCGGCGTGCAAAGAACTTCATCTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCTTGGAGTGGTGAGGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTCATCCCAAAGGAACTTTCACTTAAGATTATGAGTAAGATTGAAGCCGGGGAAAAGTTCACTGTGTACGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCGGTTCAAGCAATATTGGACTGGCAGAGGAGAACAATGGAGATGATGTACAAGGATATCGTTCTGGCACTCAGGGCAAAGGGAATCGAGGAAGATCCTCGGAATTATTTGACGTTCTTCTGCCTCGGTAATCGGGAAGTAAAGAAACAAGGAGAGTACGAGCCTTCCGAACAACCAGAACCTGATTCAGATTACGAGAGAGCCCAACAGTCCCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGGTAAGTTTGAAAATTACTGTCTTAAATTACAGGCTGCAGCAATGTCACAAATTTTGAAGCATTATTTTTTAATCATTACTTTCATGATTATGCATACTTTTTTTCTTTCTTTGTAGTTGATGACGAATACATAATCGTTGGATCTGCCAACATCAACCAAAGATCAATGGACGGAGCGAGGGACTCTGAGATAGCGATGGGAGCCTATCAGCCCTACCATTTAGCTGCAAGACAGCCAGCACGTGGTCAAGTCCATGGTTTTCGCATGGCATTATGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTCATCCAGAAAATCAAGAATGTATCCGTAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCAAATGATTCACTTGAGCACGACCTTCCTGGACACTTGCTTCGCTATCCGATTGGAGTTGCTAGTGAAGGAGATGTCACACAGCTGCCTGGATTTGAATTTTTCCCCGACACCAAGGCTCGGATTCTCGGCGGCAAAGCTGATTACCTCCCTCCTATCCTTACTACTTAG
Protein sequence

>MS.gene75365.t1

MAQIHLHGTLHATIYEVDKLNAGGGGNFLSMIRQNIEETVGLGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHMASDIIFTVKDDNPVGATLIGRAYVPVEEVLNGEEIDRWVEILDTEKNPIQEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRKGCKVSLYQDSHVPDNFIPKIPLSGGKTYEPHRCWEDIYDAITNAKHMIYITGWSVYTEISLVRDSRRPKAGGDTTIGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFEGTDVHCVLCPRNPDDGGSIIQDLQVSTMFTHHQKIVVVDSELPGGGSDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVTFPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWSGEDIKPEDIGALHLIPKELSLKIMSKIEAGEKFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVLALRAKGIEEDPRNYLTFFCLGNREVKKQGEYEPSEQPEPDSDYERAQQSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQVHGFRMALWYEHLGMLHDSFLHPENQECIRKVNQIADKYWDLYSNDSLEHDLPGHLLRYPIGVASEGDVTQLPGFEFFPDTKARILGGKADYLPPILTT