Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23416.t1 | XP_003625397.2 | 97.3 | 480 | 13 | 0 | 1 | 480 | 27 | 506 | 6.20E-270 | 939.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23416.t1 | Q8RY79 | 73.2 | 477 | 128 | 0 | 1 | 477 | 12 | 488 | 1.6e-210 | 733.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23416.t1 | G7KYF4 | 97.3 | 480 | 13 | 0 | 1 | 480 | 27 | 506 | 4.4e-270 | 939.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene23416 | 0.828202 | 1.02E-54 | -1.69E-46 |
| MS.gene050875 | MS.gene23416 | 0.820405 | 6.98E-53 | -1.69E-46 |
| MS.gene051439 | MS.gene23416 | 0.826341 | 2.86E-54 | -1.69E-46 |
| MS.gene052169 | MS.gene23416 | 0.815116 | 1.09E-51 | -1.69E-46 |
| MS.gene052378 | MS.gene23416 | 0.893778 | 4.58E-75 | -1.69E-46 |
| MS.gene054662 | MS.gene23416 | 0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene054742 | MS.gene23416 | 0.804798 | 1.82E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene23416 | 0.84161 | 4.28E-58 | -1.69E-46 |
| MS.gene056387 | MS.gene23416 | -0.816238 | 6.13E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene23416 | 0.813262 | 2.80E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene23416 | 0.810751 | 9.86E-51 | -1.69E-46 |
| MS.gene057717 | MS.gene23416 | 0.802283 | 6.04E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene23416 | 0.818756 | 1.66E-52 | -1.69E-46 |
| MS.gene05926 | MS.gene23416 | 0.838007 | 3.71E-57 | -1.69E-46 |
| MS.gene05960 | MS.gene23416 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene23416 | 0.801217 | 9.99E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23416.t1 | MTR_7g098730 | 97.292 | 480 | 13 | 0 | 1 | 480 | 27 | 506 | 0.0 | 968 |
| MS.gene23416.t1 | MTR_7g098700 | 93.958 | 480 | 29 | 0 | 1 | 480 | 53 | 532 | 0.0 | 936 |
| MS.gene23416.t1 | MTR_7g058700 | 55.040 | 496 | 205 | 3 | 1 | 478 | 4 | 499 | 0.0 | 581 |
| MS.gene23416.t1 | MTR_2g029430 | 52.827 | 513 | 207 | 3 | 1 | 478 | 4 | 516 | 0.0 | 568 |
| MS.gene23416.t1 | MTR_2g029450 | 52.827 | 513 | 207 | 3 | 1 | 478 | 4 | 516 | 0.0 | 568 |
| MS.gene23416.t1 | MTR_8g028060 | 54.141 | 495 | 192 | 5 | 1 | 477 | 20 | 497 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23416.t1 | AT2G20340 | 73.166 | 477 | 128 | 0 | 1 | 477 | 12 | 488 | 0.0 | 756 |
| MS.gene23416.t1 | AT2G20340 | 67.925 | 477 | 126 | 1 | 1 | 477 | 12 | 461 | 0.0 | 686 |
| MS.gene23416.t1 | AT4G28680 | 66.458 | 480 | 157 | 1 | 1 | 476 | 60 | 539 | 0.0 | 680 |
| MS.gene23416.t1 | AT4G28680 | 66.390 | 482 | 156 | 2 | 1 | 476 | 60 | 541 | 0.0 | 677 |
| MS.gene23416.t1 | AT4G28680 | 66.183 | 482 | 157 | 2 | 1 | 476 | 60 | 541 | 0.0 | 676 |
| MS.gene23416.t1 | AT4G28680 | 66.183 | 482 | 157 | 2 | 1 | 476 | 51 | 532 | 0.0 | 676 |
| MS.gene23416.t1 | AT4G28680 | 62.549 | 510 | 157 | 3 | 1 | 476 | 51 | 560 | 0.0 | 661 |
| MS.gene23416.t1 | AT4G28680 | 69.139 | 337 | 98 | 2 | 1 | 331 | 51 | 387 | 7.57e-173 | 493 |
| MS.gene23416.t1 | AT4G28680 | 69.497 | 318 | 91 | 2 | 1 | 312 | 51 | 368 | 2.73e-163 | 467 |
Find 106 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATATGCAAAATAATT+AGG | 0.126930 | 7.2:-12661055 | None:intergenic |
| AAAACATGTTGTAATGATTC+AGG | 0.217610 | 7.2:-12660390 | None:intergenic |
| TACGGTAGCACATAAGAAAA+AGG | 0.229362 | 7.2:-12661961 | None:intergenic |
| GACTTAATCCAGAGCTTTGC+AGG | 0.261975 | 7.2:+12661847 | MS.gene23416:CDS |
| TTAACATGAATGCACATAAA+TGG | 0.263676 | 7.2:+12663079 | MS.gene23416:CDS |
| TGCCATTATCTTCAGAGTTC+AGG | 0.285544 | 7.2:-12664315 | None:intergenic |
| ACTTCGACTGTTCAGTGCTT+TGG | 0.295923 | 7.2:+12663112 | MS.gene23416:CDS |
| CTGTTCAGTGCTTTGGGTTA+AGG | 0.296887 | 7.2:+12663119 | MS.gene23416:CDS |
| CCATCCAATAGTAGCATTGC+TGG | 0.305954 | 7.2:+12661076 | MS.gene23416:CDS |
| CTTCGACTGTTCAGTGCTTT+GGG | 0.316341 | 7.2:+12663113 | MS.gene23416:CDS |
| CCCAGTTCTTAGCCAAGTTC+AGG | 0.324917 | 7.2:+12660234 | MS.gene23416:CDS |
| TGCTCTATTAGAGAGTTTAT+AGG | 0.332521 | 7.2:+12664589 | MS.gene23416:CDS |
| GAAAATATGCAAAATAATTA+GGG | 0.352501 | 7.2:-12661054 | None:intergenic |
| AAAACCAGCAATGCTACTAT+TGG | 0.365257 | 7.2:-12661080 | None:intergenic |
| ATTGGTAGACAAACAACATT+TGG | 0.372666 | 7.2:+12662968 | MS.gene23416:intron |
| ACCTGAACTTGGCTAAGAAC+TGG | 0.375623 | 7.2:-12660235 | None:intergenic |
| AAATATGTGCAGGTTCTATC+AGG | 0.375823 | 7.2:+12664476 | MS.gene23416:intron |
| TGGATGGTGATGCGACTCTA+TGG | 0.384269 | 7.2:+12663955 | MS.gene23416:CDS |
| TTTGTAAAGAAGAGTGTGTT+TGG | 0.402840 | 7.2:-12661549 | None:intergenic |
| AGCTGTACTAGTTGTATTGT+TGG | 0.403825 | 7.2:+12661456 | MS.gene23416:CDS |
| CTCAGTTGCTCAGCATCCAT+TGG | 0.409027 | 7.2:-12660151 | None:intergenic |
| CATGTGGATGCTGCTTATGC+TGG | 0.419701 | 7.2:+12662994 | MS.gene23416:CDS |
| CTCGATGCAGTAAATTCAAC+GGG | 0.432752 | 7.2:+12664358 | MS.gene23416:CDS |
| GTTTCTTGTTGTAGATGTAC+AGG | 0.433454 | 7.2:+12660997 | MS.gene23416:intron |
| TTAAGCAACCTGCAAAGCTC+TGG | 0.434822 | 7.2:-12661855 | None:intergenic |
| ATGCGACTCTATGGATTAGA+AGG | 0.437596 | 7.2:+12663964 | MS.gene23416:CDS |
| GCCATTATCTTCAGAGTTCA+GGG | 0.442627 | 7.2:-12664314 | None:intergenic |
| TCGTTGCAGCCAGGTTATCT+TGG | 0.442712 | 7.2:+12660336 | MS.gene23416:intron |
| ATTGCTTCAGAAAGTACATC+AGG | 0.443381 | 7.2:-12661909 | None:intergenic |
| AGTGCTGGTCTCAACATTGT+GGG | 0.444926 | 7.2:+12661118 | MS.gene23416:CDS |
| TCAATGAAGTGGCGGTACTC+TGG | 0.451337 | 7.2:-12663033 | None:intergenic |
| GATGCATACGTCACAAGCTT+AGG | 0.454688 | 7.2:-12661523 | None:intergenic |
| CCCCTGAACTCTGAAGATAA+TGG | 0.456710 | 7.2:+12664313 | MS.gene23416:CDS |
| GGATGAGTAGGAGCAGAATC+TGG | 0.480705 | 7.2:-12660369 | None:intergenic |
| TCAGTCGCTGTCTACAAATC+CGG | 0.481571 | 7.2:+12663267 | MS.gene23416:CDS |
| GCTTTGCAGGTTGCTTAAAA+CGG | 0.482137 | 7.2:+12661860 | MS.gene23416:CDS |
| TTAGGAGAGATGCTTAGTGC+TGG | 0.489284 | 7.2:+12661103 | MS.gene23416:CDS |
| TGGTCAAGACACAAGGTTCA+AGG | 0.489333 | 7.2:+12664044 | MS.gene23416:CDS |
| TGGTCATAGATTACAAAGAT+TGG | 0.494250 | 7.2:+12663555 | MS.gene23416:CDS |
| TTGAATTTGCAGGCCTCTCA+AGG | 0.498341 | 7.2:+12663527 | MS.gene23416:intron |
| ATATGTATATTGCAGGGCAA+GGG | 0.499593 | 7.2:+12661404 | MS.gene23416:intron |
| CTGAACAGTCGAAGTTAGTA+AGG | 0.502263 | 7.2:-12663104 | None:intergenic |
| GAGTACCGCCACTTCATTGA+CGG | 0.503745 | 7.2:+12663036 | MS.gene23416:CDS |
| TATGACCATGTTTCCTTGAG+AGG | 0.517750 | 7.2:-12663540 | None:intergenic |
| AGGGGAAAGCGCAAAACTTG+TGG | 0.519943 | 7.2:-12661889 | None:intergenic |
| GACAAGATCCTGCAAAAGGT+TGG | 0.522548 | 7.2:+12661487 | MS.gene23416:CDS |
| CTACATTGGCGAAAGTCGCT+AGG | 0.525601 | 7.2:+12662583 | MS.gene23416:CDS |
| ATAGAAAGAGAACCTGAACT+TGG | 0.527971 | 7.2:-12660246 | None:intergenic |
| CCGTGACAAGATCCTGCAAA+AGG | 0.531362 | 7.2:+12661483 | MS.gene23416:CDS |
| TTACTGCATCGAGTAGATCA+TGG | 0.533227 | 7.2:-12664348 | None:intergenic |
| TCAACATTGTGGGATTCAGC+TGG | 0.534978 | 7.2:+12661128 | MS.gene23416:CDS |
| TAGTGCTGGTCTCAACATTG+TGG | 0.535988 | 7.2:+12661117 | MS.gene23416:CDS |
| AAAGATTGGCAAATTCCGCT+TGG | 0.536599 | 7.2:+12663569 | MS.gene23416:CDS |
| AAACAACATTTGGTTTCATG+TGG | 0.538678 | 7.2:+12662978 | MS.gene23416:CDS |
| CTTTGCCAATGTGTCACCCC+TGG | 0.538800 | 7.2:-12661031 | None:intergenic |
| TCGAAACGATTGTCCTCGAC+TGG | 0.546298 | 7.2:+12661176 | MS.gene23416:CDS |
| TGTTGATCCTCTGCCTACAT+TGG | 0.549550 | 7.2:+12662569 | MS.gene23416:CDS |
| CAGATCATTAAAACTGTGGA+TGG | 0.552349 | 7.2:+12663939 | MS.gene23416:intron |
| CCAGCAATGCTACTATTGGA+TGG | 0.552967 | 7.2:-12661076 | None:intergenic |
| CAAACTAAAGAGAATGTTCG+AGG | 0.559012 | 7.2:-12664274 | None:intergenic |
| GTTTCGAGTTCAGTTGCAGC+GGG | 0.559733 | 7.2:-12661160 | None:intergenic |
| AGAAGCTTTCCAAGATAACC+TGG | 0.559883 | 7.2:-12660345 | None:intergenic |
| CCTGAACTTGGCTAAGAACT+GGG | 0.561432 | 7.2:-12660234 | None:intergenic |
| CACCTAAAACGACGTCCAAG+CGG | 0.563542 | 7.2:-12663584 | None:intergenic |
| ATCAACAGCTGTTGATGAAG+TGG | 0.568304 | 7.2:-12662553 | None:intergenic |
| AGCTTGTTGGTCAAGACACA+AGG | 0.572494 | 7.2:+12664037 | MS.gene23416:CDS |
| TACTACCAGGGGTGACACAT+TGG | 0.575038 | 7.2:+12661026 | MS.gene23416:CDS |
| TGTCCTCGACTGGCTTGCCA+AGG | 0.575415 | 7.2:+12661186 | MS.gene23416:CDS |
| AGATCCTGCAAAAGGTTGGA+AGG | 0.578086 | 7.2:+12661491 | MS.gene23416:CDS |
| GTGCCTTGGCAAGCCAGTCG+AGG | 0.578549 | 7.2:-12661189 | None:intergenic |
| TTCCACTAACCATACCTGGC+AGG | 0.580400 | 7.2:-12661575 | None:intergenic |
| TTGAGGCAGAAGGAGTGCCT+TGG | 0.581573 | 7.2:-12661203 | None:intergenic |
| ACTCGATGCAGTAAATTCAA+CGG | 0.582615 | 7.2:+12664357 | MS.gene23416:CDS |
| TGTAATGATTCAGGATGAGT+AGG | 0.583821 | 7.2:-12660381 | None:intergenic |
| AAAAGAAATCTTGAGGCAGA+AGG | 0.584604 | 7.2:-12661213 | None:intergenic |
| CTTCAACTCCGTCAATGAAG+TGG | 0.585468 | 7.2:-12663044 | None:intergenic |
| CATACGTCACAAGCTTAGGA+AGG | 0.585801 | 7.2:-12661519 | None:intergenic |
| TACATTGGCGAAAGTCGCTA+GGG | 0.587511 | 7.2:+12662584 | MS.gene23416:CDS |
| GTACAGGAAAAGATACTACC+AGG | 0.587605 | 7.2:+12661013 | MS.gene23416:CDS |
| GAGAGAGCAAGGTCATAAGA+TGG | 0.589776 | 7.2:+12660171 | MS.gene23416:CDS |
| TACATTCTACGTTTCGCAGT+AGG | 0.591077 | 7.2:+12664503 | MS.gene23416:CDS |
| ACATGCGTCACTTCTGTCAA+CGG | 0.592399 | 7.2:-12664530 | None:intergenic |
| GGTTTCTTATGTGAGTTCGC+AGG | 0.595345 | 7.2:-12663987 | None:intergenic |
| TATGTATATTGCAGGGCAAG+GGG | 0.603563 | 7.2:+12661405 | MS.gene23416:intron |
| GCTGAGCAACTGAGAGAGCA+AGG | 0.603666 | 7.2:+12660160 | MS.gene23416:CDS |
| GCAGGCCTCTCAAGGAAACA+TGG | 0.612434 | 7.2:+12663535 | MS.gene23416:intron |
| ACTTTCGCCAATGTAGGCAG+AGG | 0.614654 | 7.2:-12662576 | None:intergenic |
| TTGCTTCAGAAAGTACATCA+GGG | 0.615964 | 7.2:-12661908 | None:intergenic |
| CCATTATCTTCAGAGTTCAG+GGG | 0.617926 | 7.2:-12664313 | None:intergenic |
| CTAGCGACTTTCGCCAATGT+AGG | 0.622497 | 7.2:-12662582 | None:intergenic |
| CGTTTCGAGTTCAGTTGCAG+CGG | 0.631565 | 7.2:-12661161 | None:intergenic |
| CATAAGAAACCACATTGCAA+TGG | 0.646274 | 7.2:+12663999 | MS.gene23416:CDS |
| ATTTCAAATGACATTGCGAG+TGG | 0.648090 | 7.2:+12661930 | MS.gene23416:CDS |
| CCAGTTGAAAAGAAATCTTG+AGG | 0.651671 | 7.2:-12661220 | None:intergenic |
| TAAACTCTCTAATAGAGCAG+TGG | 0.652342 | 7.2:-12664585 | None:intergenic |
| TGCTTCAGAAAGTACATCAG+GGG | 0.653948 | 7.2:-12661907 | None:intergenic |
| ATGTATATTGCAGGGCAAGG+GGG | 0.662334 | 7.2:+12661406 | MS.gene23416:intron |
| TTATCTTCAGAGTTCAGGGG+AGG | 0.662860 | 7.2:-12664310 | None:intergenic |
| CAACTCCGTCAATGAAGTGG+CGG | 0.669512 | 7.2:-12663041 | None:intergenic |
| ATACGTCACAAGCTTAGGAA+GGG | 0.670528 | 7.2:-12661518 | None:intergenic |
| GCTCCAGATCATTAAAACTG+TGG | 0.675518 | 7.2:+12663935 | MS.gene23416:intron |
| TACAGGAAAAGATACTACCA+GGG | 0.676952 | 7.2:+12661014 | MS.gene23416:CDS |
| TGACGCATGTCAGTGCGGCG+TGG | 0.682187 | 7.2:+12664543 | MS.gene23416:CDS |
| AATAAGCAGCCATTGCAATG+TGG | 0.697849 | 7.2:-12664008 | None:intergenic |
| AGAAGTGACGCATGTCAGTG+CGG | 0.706512 | 7.2:+12664538 | MS.gene23416:CDS |
| ACAGGAAAAGATACTACCAG+GGG | 0.774613 | 7.2:+12661015 | MS.gene23416:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGTAAATGCATTTATA+CGG | + | chr7.2:12660829-12660848 | MS.gene23416:intron | 15.0% |
| !! | ATCATGATTATAATATTTCT+TGG | + | chr7.2:12663758-12663777 | MS.gene23416:intron | 15.0% |
| !! | ATTTATTAATCAGATGAAAA+TGG | - | chr7.2:12660272-12660291 | None:intergenic | 15.0% |
| !! | GAAAATATGCAAAATAATTA+GGG | - | chr7.2:12661057-12661076 | None:intergenic | 15.0% |
| !!! | AATTATCTTTTGATTTTCAT+TGG | + | chr7.2:12661814-12661833 | MS.gene23416:intron | 15.0% |
| !!! | TAATATTTCTTGGATTTTTA+TGG | + | chr7.2:12663768-12663787 | MS.gene23416:intron | 15.0% |
| !! | AAAAACAAATCTTATAGACA+TGG | + | chr7.2:12662797-12662816 | MS.gene23416:intron | 20.0% |
| !! | ACAAAATGGATAATAAACAT+TGG | + | chr7.2:12662374-12662393 | MS.gene23416:intron | 20.0% |
| !! | ACTAGTAAGATGAAATTAAA+AGG | - | chr7.2:12662099-12662118 | None:intergenic | 20.0% |
| !! | AGGCATATGAAATATTTATT+AGG | + | chr7.2:12661362-12661381 | MS.gene23416:intron | 20.0% |
| !! | ATATGAATCTTATAATTCCA+AGG | - | chr7.2:12663874-12663893 | None:intergenic | 20.0% |
| !! | CAAAATGGATAATAAACATT+GGG | + | chr7.2:12662375-12662394 | MS.gene23416:intron | 20.0% |
| !! | GAATTAATTATTCTAGCATT+TGG | + | chr7.2:12663707-12663726 | MS.gene23416:intron | 20.0% |
| !! | GACGTTTAGAAATATATTAT+GGG | - | chr7.2:12663147-12663166 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAATCGATATA+AGG | - | chr7.2:12662078-12662097 | None:intergenic | 20.0% |
| !! | GGAAAATATGCAAAATAATT+AGG | - | chr7.2:12661058-12661077 | None:intergenic | 20.0% |
| !! | TAAAATAACAATAGATCAGA+AGG | - | chr7.2:12661617-12661636 | None:intergenic | 20.0% |
| !! | TAATCATGATTACATCAAAA+TGG | - | chr7.2:12663748-12663767 | None:intergenic | 20.0% |
| !! | TATTGTAAATGCATTTATAC+GGG | + | chr7.2:12660830-12660849 | MS.gene23416:intron | 20.0% |
| !! | TGACGTTTAGAAATATATTA+TGG | - | chr7.2:12663148-12663167 | None:intergenic | 20.0% |
| !!! | AAACAATATCAATTTTCTGT+TGG | - | chr7.2:12662910-12662929 | None:intergenic | 20.0% |
| !!! | AAATATTTCATATGCCTTTT+GGG | - | chr7.2:12661359-12661378 | None:intergenic | 20.0% |
| !!! | ACATACTTCTTTTAACTATT+TGG | - | chr7.2:12662679-12662698 | None:intergenic | 20.0% |
| !!! | ATATTTTGAGTCATATATTG+AGG | + | chr7.2:12663412-12663431 | MS.gene23416:intron | 20.0% |
| !!! | CACATATTTTTTATCATCAA+CGG | - | chr7.2:12664465-12664484 | None:intergenic | 20.0% |
| !!! | GATTTGTTTTTATATTCCAT+AGG | - | chr7.2:12662788-12662807 | None:intergenic | 20.0% |
| !!! | TAAATATTTCATATGCCTTT+TGG | - | chr7.2:12661360-12661379 | None:intergenic | 20.0% |
| !!! | TCATTACAACATGTTTTAAA+TGG | + | chr7.2:12660396-12660415 | MS.gene23416:CDS | 20.0% |
| !!! | TTTCTTTGTTTAGTGTTTAT+GGG | + | chr7.2:12662210-12662229 | MS.gene23416:intron | 20.0% |
| ! | AAAACATGTTGTAATGATTC+AGG | - | chr7.2:12660393-12660412 | None:intergenic | 25.0% |
| ! | AAAATATCTTGATGTTCGTT+TGG | + | chr7.2:12660580-12660599 | MS.gene23416:intron | 25.0% |
| ! | AAATGACTTAGTTTAACAGT+TGG | - | chr7.2:12662828-12662847 | None:intergenic | 25.0% |
| ! | AATAAAAACACAAGAAGCAA+AGG | - | chr7.2:12660462-12660481 | None:intergenic | 25.0% |
| ! | AATCTGAAGATTGTACAAAA+TGG | + | chr7.2:12662360-12662379 | MS.gene23416:intron | 25.0% |
| ! | ACAATCTGATATTGTCTTAT+TGG | + | chr7.2:12662950-12662969 | MS.gene23416:intron | 25.0% |
| ! | ACTATGATATGTATATTGCA+GGG | + | chr7.2:12661398-12661417 | MS.gene23416:intron | 25.0% |
| ! | ATAAGACATGCATCATTATT+TGG | - | chr7.2:12664176-12664195 | None:intergenic | 25.0% |
| ! | ATCTAATCTCATCTAATCTA+AGG | - | chr7.2:12663832-12663851 | None:intergenic | 25.0% |
| ! | CAAATATACATGTTTGTATG+TGG | + | chr7.2:12663655-12663674 | MS.gene23416:intron | 25.0% |
| ! | CTTTATATTACCAAGAATTG+CGG | + | chr7.2:12660519-12660538 | MS.gene23416:intron | 25.0% |
| ! | GAATATCTGAAAAATAAGGT+AGG | + | chr7.2:12663289-12663308 | MS.gene23416:intron | 25.0% |
| ! | GAGTCTTAGATTTGAAAAAT+AGG | + | chr7.2:12661702-12661721 | MS.gene23416:intron | 25.0% |
| ! | TAAATCTCCATAATAGCTTA+TGG | + | chr7.2:12660729-12660748 | MS.gene23416:intron | 25.0% |
| ! | TACTATGATATGTATATTGC+AGG | + | chr7.2:12661397-12661416 | MS.gene23416:intron | 25.0% |
| ! | TGATGATAAAAAATATGTGC+AGG | + | chr7.2:12664466-12664485 | MS.gene23416:intron | 25.0% |
| ! | TTAACATGAATGCACATAAA+TGG | + | chr7.2:12663079-12663098 | MS.gene23416:CDS | 25.0% |
| ! | TTATCAACCAAATTCATTCA+TGG | - | chr7.2:12661327-12661346 | None:intergenic | 25.0% |
| ! | TTTCATCTTACTAGTAAGTT+TGG | + | chr7.2:12662104-12662123 | MS.gene23416:intron | 25.0% |
| !! | AAATGTTTTCATTACACACT+CGG | + | chr7.2:12664381-12664400 | MS.gene23416:CDS | 25.0% |
| !! | AATTAATTCAAGTTTCCAGT+AGG | - | chr7.2:12663696-12663715 | None:intergenic | 25.0% |
| !! | CATGACTTTTATTAAATCCT+TGG | + | chr7.2:12663854-12663873 | MS.gene23416:intron | 25.0% |
| !! | GTTTCTTTGTTTAGTGTTTA+TGG | + | chr7.2:12662209-12662228 | MS.gene23416:intron | 25.0% |
| !! | TCAGAAGACTTTTATTCTTA+CGG | - | chr7.2:12661982-12662001 | None:intergenic | 25.0% |
| !! | TTATGGATTTATGTATCGAT+TGG | + | chr7.2:12663785-12663804 | MS.gene23416:intron | 25.0% |
| !! | TTGAAAAATAGGTCTTTTCA+TGG | + | chr7.2:12661713-12661732 | MS.gene23416:intron | 25.0% |
| !!! | ACCTTATTTTTCAGATATTC+CGG | - | chr7.2:12663289-12663308 | None:intergenic | 25.0% |
| !!! | CATTCTCTTTAGTTTGTTTT+CGG | + | chr7.2:12664281-12664300 | MS.gene23416:CDS | 25.0% |
| !!! | GATAATTATTTCTGTGAGTT+TGG | + | chr7.2:12661253-12661272 | MS.gene23416:intron | 25.0% |
| !!! | TAAGCTGTTTTAAGCTAATT+TGG | + | chr7.2:12660704-12660723 | MS.gene23416:intron | 25.0% |
| AACAAGCTCTCTTATATTCA+TGG | + | chr7.2:12661676-12661695 | MS.gene23416:intron | 30.0% | |
| ACAAGCTCTCTTATATTCAT+GGG | + | chr7.2:12661677-12661696 | MS.gene23416:intron | 30.0% | |
| ATTATGCAATTTGTCCTAGA+AGG | - | chr7.2:12664077-12664096 | None:intergenic | 30.0% | |
| ATTGGTAGACAAACAACATT+TGG | + | chr7.2:12662968-12662987 | MS.gene23416:intron | 30.0% | |
| CCAAAAATAAAAACATCTGC+TGG | - | chr7.2:12660954-12660973 | None:intergenic | 30.0% | |
| CCATAATAGCTTATGGAAAT+AGG | + | chr7.2:12660736-12660755 | MS.gene23416:intron | 30.0% | |
| CCTATTTCCATAAGCTATTA+TGG | - | chr7.2:12660739-12660758 | None:intergenic | 30.0% | |
| GATAAAACTAAGAACCCAAA+AGG | + | chr7.2:12661342-12661361 | MS.gene23416:intron | 30.0% | |
| GGTAATATAAAGCGAGTTTA+TGG | - | chr7.2:12660511-12660530 | None:intergenic | 30.0% | |
| TACTACACCATGAATGAATT+TGG | + | chr7.2:12661317-12661336 | MS.gene23416:intron | 30.0% | |
| TCCGGAATATCTGAAAAATA+AGG | + | chr7.2:12663285-12663304 | MS.gene23416:CDS | 30.0% | |
| TGAGTATTCACATCAAATTG+AGG | + | chr7.2:12662473-12662492 | MS.gene23416:intron | 30.0% | |
| TGCAACAAAACTATATACAC+AGG | + | chr7.2:12664243-12664262 | MS.gene23416:intron | 30.0% | |
| TGCTCTATTAGAGAGTTTAT+AGG | + | chr7.2:12664589-12664608 | MS.gene23416:CDS | 30.0% | |
| TGGATTAATAAGCTCATGTT+AGG | - | chr7.2:12660922-12660941 | None:intergenic | 30.0% | |
| TGGTCATAGATTACAAAGAT+TGG | + | chr7.2:12663555-12663574 | MS.gene23416:CDS | 30.0% | |
| TTATCCCTTGATCTAATGAT+CGG | - | chr7.2:12662157-12662176 | None:intergenic | 30.0% | |
| TTCATTCATGGTGTAGTATA+AGG | - | chr7.2:12661315-12661334 | None:intergenic | 30.0% | |
| TTCTACCAACTAAAACTCTA+TGG | + | chr7.2:12662400-12662419 | MS.gene23416:intron | 30.0% | |
| ! | AAAAGAAGTATGTGACTCAT+AGG | + | chr7.2:12662686-12662705 | MS.gene23416:intron | 30.0% |
| ! | AAACAACATTTGGTTTCATG+TGG | + | chr7.2:12662978-12662997 | MS.gene23416:CDS | 30.0% |
| ! | AGATTTCTTTTCAACTGGTA+AGG | + | chr7.2:12661225-12661244 | MS.gene23416:intron | 30.0% |
| ! | ATGAGAAGTTTTCGAACTTT+TGG | + | chr7.2:12663352-12663371 | MS.gene23416:intron | 30.0% |
| ! | CTGTATTTCTTGTTGATGAA+TGG | + | chr7.2:12662441-12662460 | MS.gene23416:intron | 30.0% |
| ! | CTTGTCTAATTGTGTTCTTT+TGG | + | chr7.2:12663502-12663521 | MS.gene23416:intron | 30.0% |
| ! | GGTATGCATAAATTAACTTG+AGG | + | chr7.2:12664402-12664421 | MS.gene23416:intron | 30.0% |
| ! | TTTGTAAAGAAGAGTGTGTT+TGG | - | chr7.2:12661552-12661571 | None:intergenic | 30.0% |
| ! | TTTTCTGTTGGTCATTTCAT+AGG | - | chr7.2:12662898-12662917 | None:intergenic | 30.0% |
| !! | CATCAAAATGGATTAGAACT+AGG | - | chr7.2:12663736-12663755 | None:intergenic | 30.0% |
| !! | TCTTTTGGTATTGAATTTGC+AGG | + | chr7.2:12663517-12663536 | MS.gene23416:intron | 30.0% |
| !! | TTTGATTTTCATTGGCAGAT+AGG | + | chr7.2:12661822-12661841 | MS.gene23416:intron | 30.0% |
| !!! | CCAGCAGATGTTTTTATTTT+TGG | + | chr7.2:12660951-12660970 | MS.gene23416:intron | 30.0% |
| !!! | GTATCGATTGGTTTTTTATG+AGG | + | chr7.2:12663797-12663816 | MS.gene23416:intron | 30.0% |
| AAAACCAGCAATGCTACTAT+TGG | - | chr7.2:12661083-12661102 | None:intergenic | 35.0% | |
| AAAAGAAATCTTGAGGCAGA+AGG | - | chr7.2:12661216-12661235 | None:intergenic | 35.0% | |
| AAATATGTGCAGGTTCTATC+AGG | + | chr7.2:12664476-12664495 | MS.gene23416:intron | 35.0% | |
| ACGGAAAGAACATATTACGT+AGG | - | chr7.2:12664446-12664465 | None:intergenic | 35.0% | |
| ACGGTAGCACATAAGAAAAA+GGG | - | chr7.2:12661963-12661982 | None:intergenic | 35.0% | |
| ACTCGATGCAGTAAATTCAA+CGG | + | chr7.2:12664357-12664376 | MS.gene23416:CDS | 35.0% | |
| AGCTGTACTAGTTGTATTGT+TGG | + | chr7.2:12661456-12661475 | MS.gene23416:CDS | 35.0% | |
| AGTATAGTTTCACGACACTA+AGG | - | chr7.2:12662260-12662279 | None:intergenic | 35.0% | |
| ATAGAAAGAGAACCTGAACT+TGG | - | chr7.2:12660249-12660268 | None:intergenic | 35.0% | |
| ATATGTATATTGCAGGGCAA+GGG | + | chr7.2:12661404-12661423 | MS.gene23416:intron | 35.0% | |
| ATATTGATGCATGTCGATAC+AGG | + | chr7.2:12663228-12663247 | MS.gene23416:intron | 35.0% | |
| ATCTTGATGTTCGTTTGGAT+TGG | + | chr7.2:12660585-12660604 | MS.gene23416:intron | 35.0% | |
| ATTGAGGAACAGAGTCATTT+GGG | + | chr7.2:12663428-12663447 | MS.gene23416:intron | 35.0% | |
| ATTTCAAATGACATTGCGAG+TGG | + | chr7.2:12661930-12661949 | MS.gene23416:CDS | 35.0% | |
| CAAACTAAAGAGAATGTTCG+AGG | - | chr7.2:12664277-12664296 | None:intergenic | 35.0% | |
| CAAGCTCTCTTATATTCATG+GGG | + | chr7.2:12661678-12661697 | MS.gene23416:intron | 35.0% | |
| CAGATCATTAAAACTGTGGA+TGG | + | chr7.2:12663939-12663958 | MS.gene23416:intron | 35.0% | |
| CATAAGAAACCACATTGCAA+TGG | + | chr7.2:12663999-12664018 | MS.gene23416:CDS | 35.0% | |
| CCAGTTGAAAAGAAATCTTG+AGG | - | chr7.2:12661223-12661242 | None:intergenic | 35.0% | |
| CTTCTACAACAACATGAAGA+AGG | - | chr7.2:12662185-12662204 | None:intergenic | 35.0% | |
| GATCTTAAACTATGCATGCT+AGG | + | chr7.2:12662286-12662305 | MS.gene23416:intron | 35.0% | |
| GGTTAACACTTGCATGAAAA+TGG | + | chr7.2:12660757-12660776 | MS.gene23416:intron | 35.0% | |
| GTATTCACATCAAATTGAGG+TGG | + | chr7.2:12662476-12662495 | MS.gene23416:intron | 35.0% | |
| TAAACTCTCTAATAGAGCAG+TGG | - | chr7.2:12664588-12664607 | None:intergenic | 35.0% | |
| TACAGGAAAAGATACTACCA+GGG | + | chr7.2:12661014-12661033 | MS.gene23416:CDS | 35.0% | |
| TACGGTAGCACATAAGAAAA+AGG | - | chr7.2:12661964-12661983 | None:intergenic | 35.0% | |
| TACTACGTGTGTCATCTTAA+TGG | - | chr7.2:12661656-12661675 | None:intergenic | 35.0% | |
| TAGCGTAAAACTCTAATACC+AGG | - | chr7.2:12664121-12664140 | None:intergenic | 35.0% | |
| TATTCAAATCTCTCTCCTAC+TGG | + | chr7.2:12663678-12663697 | MS.gene23416:intron | 35.0% | |
| TATTGAGGAACAGAGTCATT+TGG | + | chr7.2:12663427-12663446 | MS.gene23416:intron | 35.0% | |
| TGTAATGATTCAGGATGAGT+AGG | - | chr7.2:12660384-12660403 | None:intergenic | 35.0% | |
| TTCACTACATTTATGCATGC+AGG | + | chr7.2:12662524-12662543 | MS.gene23416:intron | 35.0% | |
| TTTAACTGTCAGAGCTTAGA+TGG | - | chr7.2:12662860-12662879 | None:intergenic | 35.0% | |
| ! | ATTGCTTCAGAAAGTACATC+AGG | - | chr7.2:12661912-12661931 | None:intergenic | 35.0% |
| ! | CCTCAAGATTTCTTTTCAAC+TGG | + | chr7.2:12661220-12661239 | MS.gene23416:CDS | 35.0% |
| ! | GTTTCTTGTTGTAGATGTAC+AGG | + | chr7.2:12660997-12661016 | MS.gene23416:intron | 35.0% |
| ! | TGAGGTGGCTATTAACTTTT+CGG | + | chr7.2:12662491-12662510 | MS.gene23416:intron | 35.0% |
| ! | TGATCTTTCTTTGTGTTGCT+TGG | + | chr7.2:12661746-12661765 | MS.gene23416:intron | 35.0% |
| ! | TTCAAGGTATTCTTCCTTCT+AGG | + | chr7.2:12664060-12664079 | MS.gene23416:intron | 35.0% |
| ! | TTGCTTCAGAAAGTACATCA+GGG | - | chr7.2:12661911-12661930 | None:intergenic | 35.0% |
| !! | ACTGACCATAGAGTTTTAGT+TGG | - | chr7.2:12662408-12662427 | None:intergenic | 35.0% |
| !! | AGCTCTGACAGTTAAACTTT+TGG | + | chr7.2:12662864-12662883 | MS.gene23416:intron | 35.0% |
| !! | CATCCACAGTTTTAATGATC+TGG | - | chr7.2:12663941-12663960 | None:intergenic | 35.0% |
| !!! | AGTAGCATTGCTGGTTTTTT+AGG | + | chr7.2:12661085-12661104 | MS.gene23416:CDS | 35.0% |
| !!! | GTTTTAACTGTGTGTGAATG+TGG | + | chr7.2:12663382-12663401 | MS.gene23416:intron | 35.0% |
| AAAGATTGGCAAATTCCGCT+TGG | + | chr7.2:12663569-12663588 | MS.gene23416:CDS | 40.0% | |
| AAAGCTGCAACCATGATTTG+TGG | - | chr7.2:12660883-12660902 | None:intergenic | 40.0% | |
| AATAAGCAGCCATTGCAATG+TGG | - | chr7.2:12664011-12664030 | None:intergenic | 40.0% | |
| ACAGGAAAAGATACTACCAG+GGG | + | chr7.2:12661015-12661034 | MS.gene23416:CDS | 40.0% | |
| ACCATCCGATCATTAGATCA+AGG | + | chr7.2:12662149-12662168 | MS.gene23416:intron | 40.0% | |
| AGAAGCTTTCCAAGATAACC+TGG | - | chr7.2:12660348-12660367 | None:intergenic | 40.0% | |
| ATACGTCACAAGCTTAGGAA+GGG | - | chr7.2:12661521-12661540 | None:intergenic | 40.0% | |
| CCATCCGATCATTAGATCAA+GGG | + | chr7.2:12662150-12662169 | MS.gene23416:intron | 40.0% | |
| CCATTATCTTCAGAGTTCAG+GGG | - | chr7.2:12664316-12664335 | None:intergenic | 40.0% | |
| CGAGGAGATAACAATACCTA+TGG | + | chr7.2:12662769-12662788 | MS.gene23416:intron | 40.0% | |
| CTAAGTTTGACCGCAATTCT+TGG | - | chr7.2:12660532-12660551 | None:intergenic | 40.0% | |
| CTACATTTATGCATGCAGGT+TGG | + | chr7.2:12662528-12662547 | MS.gene23416:intron | 40.0% | |
| CTCGATGCAGTAAATTCAAC+GGG | + | chr7.2:12664358-12664377 | MS.gene23416:CDS | 40.0% | |
| CTGAACAGTCGAAGTTAGTA+AGG | - | chr7.2:12663107-12663126 | None:intergenic | 40.0% | |
| GATATGTATATTGCAGGGCA+AGG | + | chr7.2:12661403-12661422 | MS.gene23416:intron | 40.0% | |
| GCCATTATCTTCAGAGTTCA+GGG | - | chr7.2:12664317-12664336 | None:intergenic | 40.0% | |
| GCTCCAGATCATTAAAACTG+TGG | + | chr7.2:12663935-12663954 | MS.gene23416:intron | 40.0% | |
| GCTTCTGTTTACATGCTTGT+AGG | + | chr7.2:12663311-12663330 | MS.gene23416:intron | 40.0% | |
| GCTTTGCAGGTTGCTTAAAA+CGG | + | chr7.2:12661860-12661879 | MS.gene23416:CDS | 40.0% | |
| GTACAGGAAAAGATACTACC+AGG | + | chr7.2:12661013-12661032 | MS.gene23416:CDS | 40.0% | |
| GTATGTGACTCATAGGAACT+AGG | + | chr7.2:12662693-12662712 | MS.gene23416:intron | 40.0% | |
| TACATTCTACGTTTCGCAGT+AGG | + | chr7.2:12664503-12664522 | MS.gene23416:CDS | 40.0% | |
| TATGACCATGTTTCCTTGAG+AGG | - | chr7.2:12663543-12663562 | None:intergenic | 40.0% | |
| TATGTATATTGCAGGGCAAG+GGG | + | chr7.2:12661405-12661424 | MS.gene23416:intron | 40.0% | |
| TCATACGTACAACTGTAACC+TGG | + | chr7.2:12664100-12664119 | MS.gene23416:intron | 40.0% | |
| TGCCATTATCTTCAGAGTTC+AGG | - | chr7.2:12664318-12664337 | None:intergenic | 40.0% | |
| TGCCTCCTGTTTAAGAAACA+TGG | - | chr7.2:12663454-12663473 | None:intergenic | 40.0% | |
| TTACTGCATCGAGTAGATCA+TGG | - | chr7.2:12664351-12664370 | None:intergenic | 40.0% | |
| TTCTTTACAAAAAGCCTGCC+AGG | + | chr7.2:12661561-12661580 | MS.gene23416:CDS | 40.0% | |
| TTGGGCCATGTTTCTTAAAC+AGG | + | chr7.2:12663446-12663465 | MS.gene23416:intron | 40.0% | |
| ! | ATCAACAGCTGTTGATGAAG+TGG | - | chr7.2:12662556-12662575 | None:intergenic | 40.0% |
| ! | CTTTTCAACTGGTAAGGTCT+TGG | + | chr7.2:12661231-12661250 | MS.gene23416:intron | 40.0% |
| ! | GATGTTCGTTTGGATTGGAT+TGG | + | chr7.2:12660590-12660609 | MS.gene23416:intron | 40.0% |
| ! | GATTTTCATTGGCAGATAGG+AGG | + | chr7.2:12661825-12661844 | MS.gene23416:intron | 40.0% |
| ! | TGCTTCAGAAAGTACATCAG+GGG | - | chr7.2:12661910-12661929 | None:intergenic | 40.0% |
| !! | ATGCGACTCTATGGATTAGA+AGG | + | chr7.2:12663964-12663983 | MS.gene23416:CDS | 40.0% |
| !!! | GCTTATTTTGAGGAGCTTGT+TGG | + | chr7.2:12664024-12664043 | MS.gene23416:CDS | 40.0% |
| !!! | TGCAATGGCTGCTTATTTTG+AGG | + | chr7.2:12664014-12664033 | MS.gene23416:CDS | 40.0% |
| AAGATCAGAAACGACTCTGC+CGG | + | chr7.2:12662734-12662753 | MS.gene23416:intron | 45.0% | |
| ACATGCGTCACTTCTGTCAA+CGG | - | chr7.2:12664533-12664552 | None:intergenic | 45.0% | |
| ACCTGAACTTGGCTAAGAAC+TGG | - | chr7.2:12660238-12660257 | None:intergenic | 45.0% | |
| ACTTCGACTGTTCAGTGCTT+TGG | + | chr7.2:12663112-12663131 | MS.gene23416:CDS | 45.0% | |
| AGATCCTGCAAAAGGTTGGA+AGG | + | chr7.2:12661491-12661510 | MS.gene23416:CDS | 45.0% | |
| ATGTATATTGCAGGGCAAGG+GGG | + | chr7.2:12661406-12661425 | MS.gene23416:intron | 45.0% | |
| CACGACACTAAGGTTGTTAC+CGG | - | chr7.2:12662250-12662269 | None:intergenic | 45.0% | |
| CATACGTCACAAGCTTAGGA+AGG | - | chr7.2:12661522-12661541 | None:intergenic | 45.0% | |
| CCAGCAATGCTACTATTGGA+TGG | - | chr7.2:12661079-12661098 | None:intergenic | 45.0% | |
| CCATCCAATAGTAGCATTGC+TGG | + | chr7.2:12661076-12661095 | MS.gene23416:CDS | 45.0% | |
| CCCTTGATCTAATGATCGGA+TGG | - | chr7.2:12662153-12662172 | None:intergenic | 45.0% | |
| CCTGAACTTGGCTAAGAACT+GGG | - | chr7.2:12660237-12660256 | None:intergenic | 45.0% | |
| CTCCTCGAGTTTCTAACTTC+CGG | - | chr7.2:12662756-12662775 | None:intergenic | 45.0% | |
| CTTCAACTCCGTCAATGAAG+TGG | - | chr7.2:12663047-12663066 | None:intergenic | 45.0% | |
| CTTCGACTGTTCAGTGCTTT+GGG | + | chr7.2:12663113-12663132 | MS.gene23416:CDS | 45.0% | |
| CTTGCCTGTTAACCTACACT+GGG | + | chr7.2:12663913-12663932 | MS.gene23416:intron | 45.0% | |
| GAAGTTCCACTAACCATACC+TGG | - | chr7.2:12661582-12661601 | None:intergenic | 45.0% | |
| GACAAGATCCTGCAAAAGGT+TGG | + | chr7.2:12661487-12661506 | MS.gene23416:CDS | 45.0% | |
| GACTTAATCCAGAGCTTTGC+AGG | + | chr7.2:12661847-12661866 | MS.gene23416:CDS | 45.0% | |
| GAGAGAGCAAGGTCATAAGA+TGG | + | chr7.2:12660171-12660190 | MS.gene23416:CDS | 45.0% | |
| GATGCATACGTCACAAGCTT+AGG | - | chr7.2:12661526-12661545 | None:intergenic | 45.0% | |
| GGCCATGTTTCTTAAACAGG+AGG | + | chr7.2:12663449-12663468 | MS.gene23416:intron | 45.0% | |
| GGTTTCTTATGTGAGTTCGC+AGG | - | chr7.2:12663990-12664009 | None:intergenic | 45.0% | |
| TACAAAAAGCCTGCCAGGTA+TGG | + | chr7.2:12661566-12661585 | MS.gene23416:intron | 45.0% | |
| TACATTGGCGAAAGTCGCTA+GGG | + | chr7.2:12662584-12662603 | MS.gene23416:CDS | 45.0% | |
| TCAACATTGTGGGATTCAGC+TGG | + | chr7.2:12661128-12661147 | MS.gene23416:CDS | 45.0% | |
| TCAGTCGCTGTCTACAAATC+CGG | + | chr7.2:12663267-12663286 | MS.gene23416:CDS | 45.0% | |
| TCCAAACGCACCACAAATCA+TGG | + | chr7.2:12660870-12660889 | MS.gene23416:intron | 45.0% | |
| TGGTCAAGACACAAGGTTCA+AGG | + | chr7.2:12664044-12664063 | MS.gene23416:CDS | 45.0% | |
| TGTTGATCCTCTGCCTACAT+TGG | + | chr7.2:12662569-12662588 | MS.gene23416:CDS | 45.0% | |
| TTAAGCAACCTGCAAAGCTC+TGG | - | chr7.2:12661858-12661877 | None:intergenic | 45.0% | |
| TTAGGAGAGATGCTTAGTGC+TGG | + | chr7.2:12661103-12661122 | MS.gene23416:CDS | 45.0% | |
| TTATCTTCAGAGTTCAGGGG+AGG | - | chr7.2:12664313-12664332 | None:intergenic | 45.0% | |
| TTGAATTTGCAGGCCTCTCA+AGG | + | chr7.2:12663527-12663546 | MS.gene23416:intron | 45.0% | |
| ! | ACATCTGCTGGTTAGAGAGA+TGG | - | chr7.2:12660942-12660961 | None:intergenic | 45.0% |
| ! | ACCATGATTTGTGGTGCGTT+TGG | - | chr7.2:12660874-12660893 | None:intergenic | 45.0% |
| ! | CATTCCTTCCAACCTTTTGC+AGG | - | chr7.2:12661498-12661517 | None:intergenic | 45.0% |
| ! | CCCCTGAACTCTGAAGATAA+TGG | + | chr7.2:12664313-12664332 | MS.gene23416:CDS | 45.0% |
| ! | CCTTTTGCAGGATCTTGTCA+CGG | - | chr7.2:12661486-12661505 | None:intergenic | 45.0% |
| ! | CTGTTCAGTGCTTTGGGTTA+AGG | + | chr7.2:12663119-12663138 | MS.gene23416:CDS | 45.0% |
| ! | CTTTTGCAGGATCTTGTCAC+GGG | - | chr7.2:12661485-12661504 | None:intergenic | 45.0% |
| !! | AGCTTGTTGGTCAAGACACA+AGG | + | chr7.2:12664037-12664056 | MS.gene23416:CDS | 45.0% |
| !! | AGTGCTGGTCTCAACATTGT+GGG | + | chr7.2:12661118-12661137 | MS.gene23416:CDS | 45.0% |
| !! | CGTCGTTTTAGGTGTCTCTT+TGG | + | chr7.2:12663593-12663612 | MS.gene23416:intron | 45.0% |
| !! | TAGTGCTGGTCTCAACATTG+TGG | + | chr7.2:12661117-12661136 | MS.gene23416:CDS | 45.0% |
| AAGATAACCTGGCTGCAACG+AGG | - | chr7.2:12660337-12660356 | None:intergenic | 50.0% | |
| ACTTTCGCCAATGTAGGCAG+AGG | - | chr7.2:12662579-12662598 | None:intergenic | 50.0% | |
| AGAAGTGACGCATGTCAGTG+CGG | + | chr7.2:12664538-12664557 | MS.gene23416:CDS | 50.0% | |
| AGATAACCTGGCTGCAACGA+GGG | - | chr7.2:12660336-12660355 | None:intergenic | 50.0% | |
| CAACTCCGTCAATGAAGTGG+CGG | - | chr7.2:12663044-12663063 | None:intergenic | 50.0% | |
| CAAGGGGGTGGAGTTATACA+GGG | + | chr7.2:12661421-12661440 | MS.gene23416:CDS | 50.0% | |
| CACCTAAAACGACGTCCAAG+CGG | - | chr7.2:12663587-12663606 | None:intergenic | 50.0% | |
| CCAGTGTAGGTTAACAGGCA+AGG | - | chr7.2:12663915-12663934 | None:intergenic | 50.0% | |
| CCCAGTTCTTAGCCAAGTTC+AGG | + | chr7.2:12660234-12660253 | MS.gene23416:CDS | 50.0% | |
| CCGTGACAAGATCCTGCAAA+AGG | + | chr7.2:12661483-12661502 | MS.gene23416:CDS | 50.0% | |
| CCTTGCCTGTTAACCTACAC+TGG | + | chr7.2:12663912-12663931 | MS.gene23416:intron | 50.0% | |
| CTACATTGGCGAAAGTCGCT+AGG | + | chr7.2:12662583-12662602 | MS.gene23416:CDS | 50.0% | |
| CTAGCGACTTTCGCCAATGT+AGG | - | chr7.2:12662585-12662604 | None:intergenic | 50.0% | |
| GGATGAGTAGGAGCAGAATC+TGG | - | chr7.2:12660372-12660391 | None:intergenic | 50.0% | |
| TACTACCAGGGGTGACACAT+TGG | + | chr7.2:12661026-12661045 | MS.gene23416:CDS | 50.0% | |
| TCAATGAAGTGGCGGTACTC+TGG | - | chr7.2:12663036-12663055 | None:intergenic | 50.0% | |
| TCGAAACGATTGTCCTCGAC+TGG | + | chr7.2:12661176-12661195 | MS.gene23416:CDS | 50.0% | |
| TCGTTGCAGCCAGGTTATCT+TGG | + | chr7.2:12660336-12660355 | MS.gene23416:intron | 50.0% | |
| TGCCGGAAGTTAGAAACTCG+AGG | + | chr7.2:12662751-12662770 | MS.gene23416:intron | 50.0% | |
| TTCCACTAACCATACCTGGC+AGG | - | chr7.2:12661578-12661597 | None:intergenic | 50.0% | |
| ! | AATGATCTGGAGCCCAGTGT+AGG | - | chr7.2:12663928-12663947 | None:intergenic | 50.0% |
| ! | AGGGGAAAGCGCAAAACTTG+TGG | - | chr7.2:12661892-12661911 | None:intergenic | 50.0% |
| ! | CATGTGGATGCTGCTTATGC+TGG | + | chr7.2:12662994-12663013 | MS.gene23416:CDS | 50.0% |
| ! | GAGTACCGCCACTTCATTGA+CGG | + | chr7.2:12663036-12663055 | MS.gene23416:CDS | 50.0% |
| ! | TGGATGGTGATGCGACTCTA+TGG | + | chr7.2:12663955-12663974 | MS.gene23416:CDS | 50.0% |
| !! | CGTTTCGAGTTCAGTTGCAG+CGG | - | chr7.2:12661164-12661183 | None:intergenic | 50.0% |
| !! | GTTTCGAGTTCAGTTGCAGC+GGG | - | chr7.2:12661163-12661182 | None:intergenic | 50.0% |
| !! | TTCCGCTTGGACGTCGTTTT+AGG | + | chr7.2:12663582-12663601 | MS.gene23416:CDS | 50.0% |
| AGCCTGCCAGGTATGGTTAG+TGG | + | chr7.2:12661573-12661592 | MS.gene23416:intron | 55.0% | |
| ATGGGACACAGACGTCGTTC+CGG | + | chr7.2:12662228-12662247 | MS.gene23416:intron | 55.0% | |
| CTTTGCCAATGTGTCACCCC+TGG | - | chr7.2:12661034-12661053 | None:intergenic | 55.0% | |
| GCAAGGGGGTGGAGTTATAC+AGG | + | chr7.2:12661420-12661439 | MS.gene23416:CDS | 55.0% | |
| GCAGGCCTCTCAAGGAAACA+TGG | + | chr7.2:12663535-12663554 | MS.gene23416:intron | 55.0% | |
| GCTGAGCAACTGAGAGAGCA+AGG | + | chr7.2:12660160-12660179 | MS.gene23416:CDS | 55.0% | |
| GGAGCCCAGTGTAGGTTAAC+AGG | - | chr7.2:12663920-12663939 | None:intergenic | 55.0% | |
| TATATTGCAGGGCAAGGGGG+TGG | + | chr7.2:12661409-12661428 | MS.gene23416:intron | 55.0% | |
| ! | CATTTTCCCTCGTTGCAGCC+AGG | + | chr7.2:12660327-12660346 | MS.gene23416:intron | 55.0% |
| !! | TTGAGGCAGAAGGAGTGCCT+TGG | - | chr7.2:12661206-12661225 | None:intergenic | 55.0% |
| !! | TGTCCTCGACTGGCTTGCCA+AGG | + | chr7.2:12661186-12661205 | MS.gene23416:CDS | 60.0% |
| GTGCCTTGGCAAGCCAGTCG+AGG | - | chr7.2:12661192-12661211 | None:intergenic | 65.0% | |
| TGACGCATGTCAGTGCGGCG+TGG | + | chr7.2:12664543-12664562 | MS.gene23416:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 12660154 | 12664610 | 12660154 | ID=MS.gene23416 |
| chr7.2 | mRNA | 12660154 | 12664610 | 12660154 | ID=MS.gene23416.t1;Parent=MS.gene23416 |
| chr7.2 | exon | 12660154 | 12660255 | 12660154 | ID=MS.gene23416.t1.exon1;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12660154 | 12660255 | 12660154 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12660345 | 12660417 | 12660345 | ID=MS.gene23416.t1.exon2;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12660345 | 12660417 | 12660345 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12661011 | 12661241 | 12661011 | ID=MS.gene23416.t1.exon3;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12661011 | 12661241 | 12661011 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12661419 | 12661582 | 12661419 | ID=MS.gene23416.t1.exon4;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12661419 | 12661582 | 12661419 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12661840 | 12661980 | 12661840 | ID=MS.gene23416.t1.exon5;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12661840 | 12661980 | 12661840 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12662546 | 12662605 | 12662546 | ID=MS.gene23416.t1.exon6;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12662546 | 12662605 | 12662546 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12662976 | 12663140 | 12662976 | ID=MS.gene23416.t1.exon7;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12662976 | 12663140 | 12662976 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12663250 | 12663306 | 12663250 | ID=MS.gene23416.t1.exon8;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12663250 | 12663306 | 12663250 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12663539 | 12663603 | 12663539 | ID=MS.gene23416.t1.exon9;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12663539 | 12663603 | 12663539 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12663942 | 12664065 | 12663942 | ID=MS.gene23416.t1.exon10;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12663942 | 12664065 | 12663942 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12664265 | 12664402 | 12664265 | ID=MS.gene23416.t1.exon11;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12664265 | 12664402 | 12664265 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| chr7.2 | exon | 12664488 | 12664610 | 12664488 | ID=MS.gene23416.t1.exon12;Parent=MS.gene23416.t1 |
| chr7.2 | CDS | 12664488 | 12664610 | 12664488 | ID=cds.MS.gene23416.t1;Parent=MS.gene23416.t1 |
| Gene Sequence |
| Protein sequence |
